Chy5G102390 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G102390
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH05: 16406583 .. 16408538 (+)
RNA-Seq Expression	Chy5G102390
Synteny	Chy5G102390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCGCTGTGGGCGAGGCGTTCGCCTTCTTAGTTCAGCTTCAACAGCTAAAAGGATTAACTGGGATCCAACTGTTGACCTTAAACTCAATCACCCATCTCTTATATTACTTGAAAAATGCAATTCAAGAACCCAATTCAAGCAGATTTTAGGGCATATGATGAGAAACAATTTGGTGGGTCAAACATTTCCTTTGAGTAGGCTTCTCTTTTTCTCTGCTGTTTCACATCCTGAGAATCTGGAATTGGCTATTCTGTTGTTTAATCACTTTACTCCTTATCCTAATCTTTATATATTCAATACAATGATCTTAGGGTTTTCATTTTCAAATGAGAAGGCCTTTTCCATTTATAGTTCTATGCTCCAAAATGGTACTTACCCAGATAGGCAAACATTTCTTTACCTTCTTCAGACTATAAAATTTGTTGCTGAAGTGAAACAGATTCATTGTCATGCCTTGGTTTTTGGTTTGCTATCAAAGGAAGAATACTTGAGAAACTCACTGATCAAGAGGTATATAGACAATGGATGTTTTGAATGTGCTCGCCAGTTGTTCGACGAAATGTCGGACCGCAATGTTGTTTCTTACAATACTATGATTCTTGGATTTGCTAAAGTGGGAAACATTTTGGGAATTTTGAAGTTATTCCATGATATGAGGTCTCATGGTCTTGAGCCTGATGATTTCACCATGTTAGGCCTCCTCTTGTTGTGTGGGCAGTTGGGTGAGACAAAGTTGGGAAAATCTGTTCATGCACAGATTGAGAAGTCCATTGGCTCTTCGAATTTGATATTGTATAATGCCCTTTTGGATATGTATGTGAAGTGCAATGAATTGAAGCTTGCTCGAAAAGTTTTCGATGGGCCAATGGAGAAGGACACGGTGTCTTGGAATACATTAATAGCAGGATATGCCAAGGTAGGTGAATTGGAACTTGCTTGTGACCTTTTTAATCAGATTCCTACAAGAGATATTGTCTCCTGGAACTCTTTGATTTCTGGCTATGCACAGAATGGTGATTATGTGACGGTCAAATGTTTGTTTACGCGTATGTTTGCCGAGAATGTTAAACCCGACAAGGTAACAATCGTTAACTTGATCTCTGCAGCAGCAGAAATGGGAGCTTTAGATCAGGGGAGATGGATCCATGGATTGGCAGTGAAAATGCTGACAAAAATAGAGGCATTTTCAGGCTCGGCATTGATTGACATGTACTGCAAGTGCGGAAGCATCGAAAGAGCTTTCGTTATTTTCAATCAGATTCCCGAGAAAGATGTCACAACATGGACAGCAATGATCACTGGGTTTGCCTTTCATGGATTTGGAAACAAAGCTCTGGAACTATTCTCCGTTATGCAGACTGAAACAAAGCCTAACGATGTGACTTTTGTTTCAGTTCTTGCAGCATGTAGCCACAGTGGCTTGGTTGATGAAGGACTCAAAGTATTTAGCAGCATGAAGAAAAGATACAGTATCGAACCAGGAGTCGAACATTATGGATGTTTGGTCGATCTGTTGTGTCGGTCGGGTAGGTTGTTGGATGCCATTGGTGTGATAGAAAAGATGCCTATGGAACCCAGTCGGTCTATTTGGGGTGCAGTATTGAGTGCATGTAGGATGCACAGAAATATGGAACTAGCAGAGAGAGCTTTGACGGAGCTGCTCAAGTTAGAGCCCGAAAAAGAGGGTGGATACATTTTGTTATCTAACGTGTATGCGACATGTGGGAGGTGGAGCTATTCGGACAGTATCAGAGAAGTGATGAACAGCAGGGAAGTGAAAAAGATTGCAGGCTGTAGTAGTGTGGCGGTGGATGGTATGGTCCATGATTTCACAGCTTCAAATAAACAGCATCCAAGATGGATGGACATTTGCTCTATTTTAAGCTTTCTAACAAATGAAATGAGGTTGGAAGCCGATGTTCCATCAAAATCACACTTGGCTACAAGTTAA

mRNA sequence

ATGTATCGCTGTGGGCGAGGCGTTCGCCTTCTTAGTTCAGCTTCAACAGCTAAAAGGATTAACTGGGATCCAACTGTTGACCTTAAACTCAATCACCCATCTCTTATATTACTTGAAAAATGCAATTCAAGAACCCAATTCAAGCAGATTTTAGGGCATATGATGAGAAACAATTTGGTGGGTCAAACATTTCCTTTGAGTAGGCTTCTCTTTTTCTCTGCTGTTTCACATCCTGAGAATCTGGAATTGGCTATTCTGTTGTTTAATCACTTTACTCCTTATCCTAATCTTTATATATTCAATACAATGATCTTAGGGTTTTCATTTTCAAATGAGAAGGCCTTTTCCATTTATAGTTCTATGCTCCAAAATGGTACTTACCCAGATAGGCAAACATTTCTTTACCTTCTTCAGACTATAAAATTTGTTGCTGAAGTGAAACAGATTCATTGTCATGCCTTGGTTTTTGGTTTGCTATCAAAGGAAGAATACTTGAGAAACTCACTGATCAAGAGGTATATAGACAATGGATGTTTTGAATGTGCTCGCCAGTTGTTCGACGAAATGTCGGACCGCAATGTTGTTTCTTACAATACTATGATTCTTGGATTTGCTAAAGTGGGAAACATTTTGGGAATTTTGAAGTTATTCCATGATATGAGGTCTCATGGTCTTGAGCCTGATGATTTCACCATGTTAGGCCTCCTCTTGTTGTGTGGGCAGTTGGGTGAGACAAAGTTGGGAAAATCTGTTCATGCACAGATTGAGAAGTCCATTGGCTCTTCGAATTTGATATTGTATAATGCCCTTTTGGATATGTATGTGAAGTGCAATGAATTGAAGCTTGCTCGAAAAGTTTTCGATGGGCCAATGGAGAAGGACACGGTGTCTTGGAATACATTAATAGCAGGATATGCCAAGGTAGGTGAATTGGAACTTGCTTGTGACCTTTTTAATCAGATTCCTACAAGAGATATTGTCTCCTGGAACTCTTTGATTTCTGGCTATGCACAGAATGGTGATTATGTGACGGTCAAATGTTTGTTTACGCGTATGTTTGCCGAGAATGTTAAACCCGACAAGGTAACAATCGTTAACTTGATCTCTGCAGCAGCAGAAATGGGAGCTTTAGATCAGGGGAGATGGATCCATGGATTGGCAGTGAAAATGCTGACAAAAATAGAGGCATTTTCAGGCTCGGCATTGATTGACATGTACTGCAAGTGCGGAAGCATCGAAAGAGCTTTCGTTATTTTCAATCAGATTCCCGAGAAAGATGTCACAACATGGACAGCAATGATCACTGGGTTTGCCTTTCATGGATTTGGAAACAAAGCTCTGGAACTATTCTCCGTTATGCAGACTGAAACAAAGCCTAACGATGTGACTTTTGTTTCAGTTCTTGCAGCATGTAGCCACAGTGGCTTGGTTGATGAAGGACTCAAAGTATTTAGCAGCATGAAGAAAAGATACAGTATCGAACCAGGAGTCGAACATTATGGATGTTTGGTCGATCTGTTGTGTCGGTCGGGTAGGTTGTTGGATGCCATTGGTGTGATAGAAAAGATGCCTATGGAACCCAGTCGGTCTATTTGGGGTGCAGTATTGAGTGCATGTAGGATGCACAGAAATATGGAACTAGCAGAGAGAGCTTTGACGGAGCTGCTCAAGTTAGAGCCCGAAAAAGAGGGTGGATACATTTTGTTATCTAACGTGTATGCGACATGTGGGAGGTGGAGCTATTCGGACAGTATCAGAGAAGTGATGAACAGCAGGGAAGTGAAAAAGATTGCAGGCTGTAGTAGTGTGGCGGTGGATGGTATGGTCCATGATTTCACAGCTTCAAATAAACAGCATCCAAGATGGATGGACATTTGCTCTATTTTAAGCTTTCTAACAAATGAAATGAGGTTGGAAGCCGATGTTCCATCAAAATCACACTTGGCTACAAGTTAA

Coding sequence (CDS)

ATGTATCGCTGTGGGCGAGGCGTTCGCCTTCTTAGTTCAGCTTCAACAGCTAAAAGGATTAACTGGGATCCAACTGTTGACCTTAAACTCAATCACCCATCTCTTATATTACTTGAAAAATGCAATTCAAGAACCCAATTCAAGCAGATTTTAGGGCATATGATGAGAAACAATTTGGTGGGTCAAACATTTCCTTTGAGTAGGCTTCTCTTTTTCTCTGCTGTTTCACATCCTGAGAATCTGGAATTGGCTATTCTGTTGTTTAATCACTTTACTCCTTATCCTAATCTTTATATATTCAATACAATGATCTTAGGGTTTTCATTTTCAAATGAGAAGGCCTTTTCCATTTATAGTTCTATGCTCCAAAATGGTACTTACCCAGATAGGCAAACATTTCTTTACCTTCTTCAGACTATAAAATTTGTTGCTGAAGTGAAACAGATTCATTGTCATGCCTTGGTTTTTGGTTTGCTATCAAAGGAAGAATACTTGAGAAACTCACTGATCAAGAGGTATATAGACAATGGATGTTTTGAATGTGCTCGCCAGTTGTTCGACGAAATGTCGGACCGCAATGTTGTTTCTTACAATACTATGATTCTTGGATTTGCTAAAGTGGGAAACATTTTGGGAATTTTGAAGTTATTCCATGATATGAGGTCTCATGGTCTTGAGCCTGATGATTTCACCATGTTAGGCCTCCTCTTGTTGTGTGGGCAGTTGGGTGAGACAAAGTTGGGAAAATCTGTTCATGCACAGATTGAGAAGTCCATTGGCTCTTCGAATTTGATATTGTATAATGCCCTTTTGGATATGTATGTGAAGTGCAATGAATTGAAGCTTGCTCGAAAAGTTTTCGATGGGCCAATGGAGAAGGACACGGTGTCTTGGAATACATTAATAGCAGGATATGCCAAGGTAGGTGAATTGGAACTTGCTTGTGACCTTTTTAATCAGATTCCTACAAGAGATATTGTCTCCTGGAACTCTTTGATTTCTGGCTATGCACAGAATGGTGATTATGTGACGGTCAAATGTTTGTTTACGCGTATGTTTGCCGAGAATGTTAAACCCGACAAGGTAACAATCGTTAACTTGATCTCTGCAGCAGCAGAAATGGGAGCTTTAGATCAGGGGAGATGGATCCATGGATTGGCAGTGAAAATGCTGACAAAAATAGAGGCATTTTCAGGCTCGGCATTGATTGACATGTACTGCAAGTGCGGAAGCATCGAAAGAGCTTTCGTTATTTTCAATCAGATTCCCGAGAAAGATGTCACAACATGGACAGCAATGATCACTGGGTTTGCCTTTCATGGATTTGGAAACAAAGCTCTGGAACTATTCTCCGTTATGCAGACTGAAACAAAGCCTAACGATGTGACTTTTGTTTCAGTTCTTGCAGCATGTAGCCACAGTGGCTTGGTTGATGAAGGACTCAAAGTATTTAGCAGCATGAAGAAAAGATACAGTATCGAACCAGGAGTCGAACATTATGGATGTTTGGTCGATCTGTTGTGTCGGTCGGGTAGGTTGTTGGATGCCATTGGTGTGATAGAAAAGATGCCTATGGAACCCAGTCGGTCTATTTGGGGTGCAGTATTGAGTGCATGTAGGATGCACAGAAATATGGAACTAGCAGAGAGAGCTTTGACGGAGCTGCTCAAGTTAGAGCCCGAAAAAGAGGGTGGATACATTTTGTTATCTAACGTGTATGCGACATGTGGGAGGTGGAGCTATTCGGACAGTATCAGAGAAGTGATGAACAGCAGGGAAGTGAAAAAGATTGCAGGCTGTAGTAGTGTGGCGGTGGATGGTATGGTCCATGATTTCACAGCTTCAAATAAACAGCATCCAAGATGGATGGACATTTGCTCTATTTTAAGCTTTCTAACAAATGAAATGAGGTTGGAAGCCGATGTTCCATCAAAATCACACTTGGCTACAAGTTAA

Protein sequence

MYRCGRGVRLLSSASTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLVGQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSSMLQNGTYPDRQTFLYLLQTIKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTLIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTAMITGFAFHGFGNKALELFSVMQTETKPNDVTFVSVLAACSHSGLVDEGLKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAGCSSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS*

Homology

[Close]

BLAST of Chy5G102390 vs. ExPASy Swiss-Prot
Match: Q9SR01 (Pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E81 PE=2 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 5.3e-204
Identity = 356/643 (55.37%), Postives = 462/643 (71.85%), Query Frame = 0


Query: 6   RGVRLLSSASTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLVGQTFP 65
           RG RL  +   +K   WDP   L+LNH SL+LLE CNSR QFKQ+L  +MR NL+  TFP
Sbjct: 9   RGFRLFGTECGSKTTKWDPVQSLQLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFP 68

Query: 66  LSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSSMLQNG 125
           +SRL+FFSA+++PENL+LA LLF +FTP PN++++NTMI   S S  + F +YSSM+++ 
Sbjct: 69  MSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFGLYSSMIRHR 128

Query: 126 TYPDRQTFLYLLQTIKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDNGCFECARQL 185
             PDRQTFLYL++   F++EVKQIHCH +V G LS   YL NSL+K Y++ G F  A ++
Sbjct: 129 VSPDRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKV 188

Query: 186 FDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCGQLGET 245
           F  M   +V S+N MI+G+AK G  L  LKL+  M S G+EPD++T+L LL+ CG L + 
Sbjct: 189 FARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDI 248

Query: 246 KLGKSVHAQIEK--SIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTLIA 305
           +LGK VH  IE+   + SSNLIL NALLDMY KC E  LA++ FD   +KD  SWNT++ 
Sbjct: 249 RLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVV 308

Query: 306 GYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNG-DYVTVKCLFTRM-FAENVKPDK 365
           G+ ++G++E A  +F+Q+P RD+VSWNSL+ GY++ G D  TV+ LF  M   E VKPD+
Sbjct: 309 GFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDR 368

Query: 366 VTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQ 425
           VT+V+LIS AA  G L  GRW+HGL +++  K +AF  SALIDMYCKCG IERAF++F  
Sbjct: 369 VTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT 428

Query: 426 IPEKDVTTWTAMITGFAFHGFGNKALELFSVMQTE-TKPNDVTFVSVLAACSHSGLVDEG 485
             EKDV  WT+MITG AFHG G +AL+LF  MQ E   PN+VT ++VL ACSHSGLV+EG
Sbjct: 429 ATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG 488

Query: 486 LKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIE-KMPMEPSRSIWGAVLSAC 545
           L VF+ MK ++  +P  EHYG LVDLLCR+GR+ +A  +++ KMPM PS+S+WG++LSAC
Sbjct: 489 LHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSAC 548

Query: 546 RMHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAG 605
           R   ++E AE ALTELLKLEPEKEGGY+LLSN+YAT GRW YSD  RE M +R VKK AG
Sbjct: 549 RGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAG 608

Query: 606 CSSVAVDGMVHDFTASNKQ-HPRWMDICSILSFLTNEMRLEAD 642
            SSV     +H F A+ KQ HPRW +I  IL  L NEM+ + D
Sbjct: 609 YSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMKPKLD 651

[Close]

BLAST of Chy5G102390 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 3.4e-126
Identity = 235/594 (39.56%), Postives = 361/594 (60.77%), Query Frame = 0


Query: 37  LLEKCNSRTQFKQILGHMMRNNLVGQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPN 96
           L+E+C S  Q KQ  GHM+R       +  S+L   +A+S   +LE A  +F+   P PN
Sbjct: 36  LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI-PKPN 95

Query: 97  LYIFNTMILGFSFSNEKAFSIYS---SMLQNGTYPDRQTFLYLLQTIKFVAEVKQIHCHA 156
            + +NT+I  ++   +   SI++    + ++  YP++ TF +L   IK  AEV  +    
Sbjct: 96  SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL---IKAAAEVSSLSLGQ 155

Query: 157 LVFGLLSK-----EEYLRNSLIKRYIDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVG 216
            + G+  K     + ++ NSLI  Y   G  + A ++F  + +++VVS+N+MI GF + G
Sbjct: 156 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 215

Query: 217 NILGILKLFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYN 276
           +    L+LF  M S  ++    TM+G+L  C ++   + G+ V + IE++  + NL L N
Sbjct: 216 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 275

Query: 277 ALLDMYVKCNELKLARKVFDGPMEKDTVSWNTLIAGYAKVGELELACDLFNQIPTRDIVS 336
           A+LDMY KC  ++ A+++FD   EKD V+W T++ GYA   + E A ++ N +P +DIV+
Sbjct: 276 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 335

Query: 337 WNSLISGYAQNGDYVTVKCLFTRM-FAENVKPDKVTIVNLISAAAEMGALDQGRWIHGLA 396
           WN+LIS Y QNG       +F  +   +N+K +++T+V+ +SA A++GAL+ GRWIH   
Sbjct: 336 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 395

Query: 397 VKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTAMITGFAFHGFGNKAL 456
            K   ++     SALI MY KCG +E++  +FN + ++DV  W+AMI G A HG GN+A+
Sbjct: 396 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 455

Query: 457 ELFSVMQ-TETKPNDVTFVSVLAACSHSGLVDEGLKVFSSMKKRYSIEPGVEHYGCLVDL 516
           ++F  MQ    KPN VTF +V  ACSH+GLVDE   +F  M+  Y I P  +HY C+VD+
Sbjct: 456 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 515

Query: 517 LCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERALTELLKLEPEKEGGY 576
           L RSG L  A+  IE MP+ PS S+WGA+L AC++H N+ LAE A T LL+LEP  +G +
Sbjct: 516 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAH 575

Query: 577 ILLSNVYATCGRWSYSDSIREVMNSREVKKIAGCSSVAVDGMVHDFTASNKQHP 621
           +LLSN+YA  G+W     +R+ M    +KK  GCSS+ +DGM+H+F + +  HP
Sbjct: 576 VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHP 625

[Close]

BLAST of Chy5G102390 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 8.1e-120
Identity = 247/666 (37.09%), Postives = 357/666 (53.60%), Query Frame = 0


Query: 23  DPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLVGQTFPLSRLLFFSAVS-HPENL 82
           DP  D   NHPSL LL  C +    + I   M++  L    + LS+L+ F  +S H E L
Sbjct: 25  DPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGL 84

Query: 83  ELAILLFNHFTPYPNLYIFNTMILGFSFSNE--KAFSIYSSMLQNGTYPDRQTFLYLLQT 142
             AI +F      PNL I+NTM  G + S++   A  +Y  M+  G  P+  TF ++L++
Sbjct: 85  PYAISVFKTIQE-PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 144

Query: 143 I---KFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDN-------------------- 202
               K   E +QIH H L  G    + Y+  SLI  Y+ N                    
Sbjct: 145 CAKSKAFKEGQQIHGHVLKLG-CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 204

Query: 203 -----------GCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGL 262
                      G  E A++LFDE+  ++VVS+N MI G+A+ GN    L+LF DM    +
Sbjct: 205 YTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV 264

Query: 263 EPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARK 322
            PD+ TM+ ++  C Q G  +LG+ VH  I+     SNL + NAL+D+Y KC        
Sbjct: 265 RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC-------- 324

Query: 323 VFDGPMEKDTVSWNTLIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTV 382
                                  GELE AC LF ++P +D++SWN+LI GY     Y   
Sbjct: 325 -----------------------GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 384

Query: 383 KCLFTRMFAENVKPDKVTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSG--SALI 442
             LF  M      P+ VT+++++ A A +GA+D GRWIH    K L  +   S   ++LI
Sbjct: 385 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 444

Query: 443 DMYCKCGSIERAFVIFNQIPEKDVTTWTAMITGFAFHGFGNKALELFSVM-QTETKPNDV 502
           DMY KCG IE A  +FN I  K +++W AMI GFA HG  + + +LFS M +   +P+D+
Sbjct: 445 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 504

Query: 503 TFVSVLAACSHSGLVDEGLKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEK 562
           TFV +L+ACSHSG++D G  +F +M + Y + P +EHYGC++DLL  SG   +A  +I  
Sbjct: 505 TFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINM 564

Query: 563 MPMEPSRSIWGAVLSACRMHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYS 622
           M MEP   IW ++L AC+MH N+EL E     L+K+EPE  G Y+LLSN+YA+ GRW+  
Sbjct: 565 MEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV 624

Query: 623 DSIREVMNSREVKKIAGCSSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADV 649
              R ++N + +KK+ GCSS+ +D +VH+F   +K HPR  +I  +L  +   +     V
Sbjct: 625 AKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFV 657

[Close]

BLAST of Chy5G102390 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 3.1e-119
Identity = 226/633 (35.70%), Postives = 357/633 (56.40%), Query Frame = 0


Query: 18  KRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLVGQTFPLSRLLFFSAVSH 77
           K INW+ T    L++P L LLEKC      KQI   M+ N L+   F  SRL+ F A+S 
Sbjct: 40  KPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSE 99

Query: 78  PENLELAILLFNHFTPYPNLYIFNTMILGFSFSN--EKAFSIYSSMLQNGTYPDRQTFLY 137
              L+ ++ +       PN++ +N  I GFS S   +++F +Y  ML++G    R     
Sbjct: 100 SRYLDYSVKILKGI-ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFT 159

Query: 138 LLQTIKFVAEVKQIHCHALVFGLLSK-----EEYLRNSLIKRYIDNGCFECARQLFDEMS 197
                K  A+++      ++ G + K       ++ N+ I  +   G  E AR++FDE  
Sbjct: 160 YPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESP 219

Query: 198 DRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKS 257
            R++VS+N +I G+ K+G     + ++  M S G++PDD TM+GL+  C  LG+   GK 
Sbjct: 220 VRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKE 279

Query: 258 VHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTLIAGYAKVGE 317
            +  ++++     + L NAL+DM+ KC ++  AR++FD   ++  VSW T+I+GYA+ G 
Sbjct: 280 FYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGL 339

Query: 318 LELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISA 377
           L+++  LF+ +  +D+V WN++I G  Q         LF  M   N KPD++T+++ +SA
Sbjct: 340 LDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSA 399

Query: 378 AAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTW 437
            +++GALD G WIH    K    +    G++L+DMY KCG+I  A  +F+ I  ++  T+
Sbjct: 400 CSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTY 459

Query: 438 TAMITGFAFHGFGNKALELFSVM-QTETKPNDVTFVSVLAACSHSGLVDEGLKVFSSMKK 497
           TA+I G A HG  + A+  F+ M      P+++TF+ +L+AC H G++  G   FS MK 
Sbjct: 460 TAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKS 519

Query: 498 RYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAE 557
           R+++ P ++HY  +VDLL R+G L +A  ++E MPME   ++WGA+L  CRMH N+EL E
Sbjct: 520 RFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGE 579

Query: 558 RALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAGCSSVAVDGMV 617
           +A  +LL+L+P   G Y+LL  +Y     W  +   R +MN R V+KI GCSS+ V+G+V
Sbjct: 580 KAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIV 639

Query: 618 HDFTASNKQHPRWMDICSILSFLTNEMRLEADV 643
            +F   +K  P    I   L  L   MR    V
Sbjct: 640 CEFIVRDKSRPESEKIYDRLHCLGRHMRSSLSV 671

[Close]

BLAST of Chy5G102390 vs. ExPASy Swiss-Prot
Match: Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 394.8 bits (1013), Expect = 1.9e-108
Identity = 212/619 (34.25%), Postives = 346/619 (55.90%), Query Frame = 0


Query: 37  LLEKCNSRTQFKQILGHMMRNNLVGQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPN 96
           +L  C +  QFKQ+    +   +        +L  F       ++  A  LF    P P+
Sbjct: 40  ILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKI-PEPD 99

Query: 97  LYIFNTMILGFS--FSNEKAFSIYSSMLQNGTYPDRQTFLYLLQTIK----FVAEVKQIH 156
           + ++N MI G+S    + +   +Y +ML+ G  PD  TF +LL  +K     +A  K++H
Sbjct: 100 VVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLH 159

Query: 157 CHALVFGLLSKEEYLRNSLIKRYIDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNI 216
           CH + FG L    Y++N+L+K Y   G  + AR +FD     +V S+N MI G+ ++   
Sbjct: 160 CHVVKFG-LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEY 219

Query: 217 LGILKLFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNAL 276
              ++L  +M  + + P   T+L +L  C ++ +  L K VH  + +     +L L NAL
Sbjct: 220 EESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENAL 279

Query: 277 LDMYVKCNELKLARKVFDGPMEKDTVSWNTLIAGYAKVGELELACDLFNQIPTRDIVSWN 336
           ++ Y  C E+ +A ++F     +D +SW +++ GY + G L+LA   F+Q+P RD +SW 
Sbjct: 280 VNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWT 339

Query: 337 SLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAAAEMGALDQGRWIHGLAVKM 396
            +I GY + G +     +F  M +  + PD+ T+V++++A A +G+L+ G WI     K 
Sbjct: 340 IMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKN 399

Query: 397 LTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTAMITGFAFHGFGNKALELF 456
             K +   G+ALIDMY KCG  E+A  +F+ + ++D  TWTAM+ G A +G G +A+++F
Sbjct: 400 KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVF 459

Query: 457 SVMQ-TETKPNDVTFVSVLAACSHSGLVDEGLKVFSSMKKRYSIEPGVEHYGCLVDLLCR 516
             MQ    +P+D+T++ VL+AC+HSG+VD+  K F+ M+  + IEP + HYGC+VD+L R
Sbjct: 460 FQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGR 519

Query: 517 SGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERALTELLKLEPEKEGGYILL 576
           +G + +A  ++ KMPM P+  +WGA+L A R+H +  +AE A  ++L+LEP+    Y LL
Sbjct: 520 AGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALL 579

Query: 577 SNVYATCGRWSYSDSIREVMNSREVKKIAGCSSVAVDGMVHDFTASNKQHPRWMDICSIL 636
            N+YA C RW     +R  +    +KK  G S + V+G  H+F A +K H +  +I   L
Sbjct: 580 CNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKL 639

Query: 637 SFLTNEMRLEADVPSKSHL 649
             L  E    A +P  S L
Sbjct: 640 EELAQESTFAAYLPDTSEL 656

[Close]

BLAST of Chy5G102390 vs. ExPASy TrEMBL
Match: A0A0A0LLC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011440 PE=4 SV=1)

HSP 1 Score: 1298.9 bits (3360), Expect = 0.0e+00
Identity = 636/651 (97.70%), Postives = 642/651 (98.62%), Query Frame = 0


Query: 1   MYRCGRGVRLLSSASTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60
           MYRCGRGVRLLSS STAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV
Sbjct: 1   MYRCGRGVRLLSSTSTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60

Query: 61  GQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS 120
           GQTFP+SRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGF FSNEKAF+IY S
Sbjct: 61  GQTFPMSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFPFSNEKAFTIYRS 120

Query: 121 MLQNGTYPDRQTFLYLLQTIKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDNGCFE 180
           MLQNGTYPDRQTFLYLLQT KFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRY+DNGCFE
Sbjct: 121 MLQNGTYPDRQTFLYLLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFE 180

Query: 181 CARQLFDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCG 240
           CARQLFDEMSDRNVVSYNTMILGFAKVGNILGIL+LFHDMRSHGLEPDDFTMLGLLLLCG
Sbjct: 181 CARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCG 240

Query: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300
           QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT
Sbjct: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300

Query: 301 LIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360
           +IAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD
Sbjct: 301 IIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360

Query: 361 KVTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420
           KVTIVNLISA AEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN
Sbjct: 361 KVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420

Query: 421 QIPEKDVTTWTAMITGFAFHGFGNKALELFSVMQTETKPNDVTFVSVLAACSHSGLVDEG 480
           QIPEKDVTTWT MITGFAFHGFGNKALELFSVMQ ETKPNDVTFVSVLAACSHSGLVDEG
Sbjct: 421 QIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAETKPNDVTFVSVLAACSHSGLVDEG 480

Query: 481 LKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540
           LK+FSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR
Sbjct: 481 LKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540

Query: 541 MHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAGC 600
           MHRNMELAERAL ELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSR VKKIAGC
Sbjct: 541 MHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGC 600

Query: 601 SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS 652
           SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS
Sbjct: 601 SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS 651

[Close]

BLAST of Chy5G102390 vs. ExPASy TrEMBL
Match: A0A5A7VDK5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001430 PE=4 SV=1)

HSP 1 Score: 1263.1 bits (3267), Expect = 0.0e+00
Identity = 617/651 (94.78%), Postives = 635/651 (97.54%), Query Frame = 0


Query: 1   MYRCGRGVRLLSSASTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60
           MYR GRGVR LSSASTAKRINWDP VDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV
Sbjct: 1   MYRYGRGVRFLSSASTAKRINWDPAVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60

Query: 61  GQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS 120
           GQTFP+SRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS
Sbjct: 61  GQTFPMSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS 120

Query: 121 MLQNGTYPDRQTFLYLLQTIKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDNGCFE 180
           MLQNGTYP RQTFLYLLQT K VAEVKQIHCHALVFGLLSKEEYL+NSLIKRYIDNGCFE
Sbjct: 121 MLQNGTYPGRQTFLYLLQTTKSVAEVKQIHCHALVFGLLSKEEYLQNSLIKRYIDNGCFE 180

Query: 181 CARQLFDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCG 240
           CARQLFD+MS+ NVV+YNTMI+G A VGNILG+LKLFHDMRSHGLEPDDFTM+GLLLLCG
Sbjct: 181 CARQLFDKMSEPNVVAYNTMIVGLANVGNILGVLKLFHDMRSHGLEPDDFTMVGLLLLCG 240

Query: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300
           QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT
Sbjct: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300

Query: 301 LIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360
           +IAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD
Sbjct: 301 IIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360

Query: 361 KVTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420
            VTI+NLISA AEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN
Sbjct: 361 MVTIINLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420

Query: 421 QIPEKDVTTWTAMITGFAFHGFGNKALELFSVMQTETKPNDVTFVSVLAACSHSGLVDEG 480
           QIPEKDVTTWT MITGFAFHG GNKALELFSVMQTETKPNDVT VSVLAACSHSGLVDEG
Sbjct: 421 QIPEKDVTTWTTMITGFAFHGCGNKALELFSVMQTETKPNDVTLVSVLAACSHSGLVDEG 480

Query: 481 LKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540
           LK+FSSMKKRY+IEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR
Sbjct: 481 LKIFSSMKKRYTIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540

Query: 541 MHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAGC 600
           MHRNMELAERAL ELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSR VKKIAGC
Sbjct: 541 MHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGC 600

Query: 601 SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS 652
           SSVAVDGMVHDFTASNKQHPRWM+ICSILSFLT+EMRLEA++PSK+HLAT+
Sbjct: 601 SSVAVDGMVHDFTASNKQHPRWMEICSILSFLTSEMRLEANIPSKAHLATT 651

[Close]

BLAST of Chy5G102390 vs. ExPASy TrEMBL
Match: A0A1S3C3D7 (pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496026 PE=4 SV=1)

HSP 1 Score: 1263.1 bits (3267), Expect = 0.0e+00
Identity = 617/651 (94.78%), Postives = 635/651 (97.54%), Query Frame = 0


Query: 1   MYRCGRGVRLLSSASTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60
           MYR GRGVR LSSASTAKRINWDP VDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV
Sbjct: 1   MYRYGRGVRFLSSASTAKRINWDPAVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60

Query: 61  GQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS 120
           GQTFP+SRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS
Sbjct: 61  GQTFPMSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS 120

Query: 121 MLQNGTYPDRQTFLYLLQTIKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDNGCFE 180
           MLQNGTYP RQTFLYLLQT K VAEVKQIHCHALVFGLLSKEEYL+NSLIKRYIDNGCFE
Sbjct: 121 MLQNGTYPGRQTFLYLLQTTKSVAEVKQIHCHALVFGLLSKEEYLQNSLIKRYIDNGCFE 180

Query: 181 CARQLFDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCG 240
           CARQLFD+MS+ NVV+YNTMI+G A VGNILG+LKLFHDMRSHGLEPDDFTM+GLLLLCG
Sbjct: 181 CARQLFDKMSEPNVVAYNTMIVGLANVGNILGVLKLFHDMRSHGLEPDDFTMVGLLLLCG 240

Query: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300
           QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT
Sbjct: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300

Query: 301 LIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360
           +IAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD
Sbjct: 301 IIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360

Query: 361 KVTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420
            VTI+NLISA AEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN
Sbjct: 361 MVTIINLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420

Query: 421 QIPEKDVTTWTAMITGFAFHGFGNKALELFSVMQTETKPNDVTFVSVLAACSHSGLVDEG 480
           QIPEKDVTTWT MITGFAFHG GNKALELFSVMQTETKPNDVT VSVLAACSHSGLVDEG
Sbjct: 421 QIPEKDVTTWTTMITGFAFHGCGNKALELFSVMQTETKPNDVTLVSVLAACSHSGLVDEG 480

Query: 481 LKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540
           LK+FSSMKKRY+IEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR
Sbjct: 481 LKIFSSMKKRYTIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540

Query: 541 MHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAGC 600
           MHRNMELAERAL ELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSR VKKIAGC
Sbjct: 541 MHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGC 600

Query: 601 SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS 652
           SSVAVDGMVHDFTASNKQHPRWM+ICSILSFLT+EMRLEA++PSK+HLAT+
Sbjct: 601 SSVAVDGMVHDFTASNKQHPRWMEICSILSFLTSEMRLEANIPSKAHLATT 651

[Close]

BLAST of Chy5G102390 vs. ExPASy TrEMBL
Match: A0A6J1G2K1 (pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111450251 PE=4 SV=1)

HSP 1 Score: 1130.9 bits (2924), Expect = 0.0e+00
Identity = 551/651 (84.64%), Postives = 592/651 (90.94%), Query Frame = 0


Query: 1   MYRCGRGVRLLSSASTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60
           M+R GRG+RLLSS+ST +RINWDPTV+LKLNHPSL+LLEKCNSR QFKQILGHMMRNNL+
Sbjct: 1   MFRYGRGIRLLSSSSTGRRINWDPTVNLKLNHPSLVLLEKCNSRIQFKQILGHMMRNNLM 60

Query: 61  GQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS 120
           GQTFP+SRLLFFSAVSHPENLE A LLFNHFTP PN++IFNTMILGFSFS EKAFSIYSS
Sbjct: 61  GQTFPMSRLLFFSAVSHPENLEWATLLFNHFTPDPNVFIFNTMILGFSFSTEKAFSIYSS 120

Query: 121 MLQNGTYPDRQTFLYLLQTIKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDNGCFE 180
           MLQ G YPDRQT LYLLQT K VAE+KQIH HALV GLL+ E YL+NSLIK Y+DNGC  
Sbjct: 121 MLQKGIYPDRQTLLYLLQTTKCVAELKQIHVHALVIGLLANEGYLQNSLIKMYLDNGCLG 180

Query: 181 CARQLFDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCG 240
            A Q+FDEMS R+VVSYN MI+G AK+G+IL +L+LFHDMR+HG EPDD TMLGL L CG
Sbjct: 181 SAHQVFDEMSSRDVVSYNIMIVGLAKMGDILEVLELFHDMRAHGFEPDDITMLGLFLSCG 240

Query: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300
           QLGE KLGKSVHAQI KS GSSNLILYNALLDMYVKCNELKLARKVFD PMEKD VSWNT
Sbjct: 241 QLGEVKLGKSVHAQIVKSNGSSNLILYNALLDMYVKCNELKLARKVFDMPMEKDAVSWNT 300

Query: 301 LIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360
           +I GYAK GELELAC++FNQIPTRDIVSWNSLISGYAQNGDYV VK LFTRMFAENVKPD
Sbjct: 301 MITGYAKAGELELACEVFNQIPTRDIVSWNSLISGYAQNGDYVMVKSLFTRMFAENVKPD 360

Query: 361 KVTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420
           KVT VN+ISA AEMGALDQGRWIHGLAVK+ TKI+AF GSALIDMYCKCGSIERA V+FN
Sbjct: 361 KVTTVNMISAVAEMGALDQGRWIHGLAVKIQTKIDAFLGSALIDMYCKCGSIERASVVFN 420

Query: 421 QIPEKDVTTWTAMITGFAFHGFGNKALELFSVMQTETKPNDVTFVSVLAACSHSGLVDEG 480
           QI EKDVT WT MITGFAFHG+GNKALELFS MQTETKPNDVTFVSVL ACSHSGLVDEG
Sbjct: 421 QISEKDVTIWTTMITGFAFHGYGNKALELFSDMQTETKPNDVTFVSVLTACSHSGLVDEG 480

Query: 481 LKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540
           LK+FSSMKKRY+IEP VEHYGCLVDLLCRSGRL +AIGVIEKMPMEPS+SIWGAVLSACR
Sbjct: 481 LKIFSSMKKRYNIEPRVEHYGCLVDLLCRSGRLSNAIGVIEKMPMEPSQSIWGAVLSACR 540

Query: 541 MHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAGC 600
           MH NMELAE+AL ELLK EPEKEGGYILLSNVYATCGRWS+SDSIREVMNSR VKKIAGC
Sbjct: 541 MHGNMELAEKALMELLKFEPEKEGGYILLSNVYATCGRWSHSDSIREVMNSRGVKKIAGC 600

Query: 601 SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS 652
           SSV VDG VHDFTA+NKQHPRWMDICS LSFLT+EM+LE DVPS++HLA S
Sbjct: 601 SSVVVDGTVHDFTAANKQHPRWMDICSTLSFLTSEMKLEPDVPSQAHLANS 651

[Close]

BLAST of Chy5G102390 vs. ExPASy TrEMBL
Match: A0A6J1KH03 (pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493785 PE=4 SV=1)

HSP 1 Score: 1110.9 bits (2872), Expect = 0.0e+00
Identity = 541/643 (84.14%), Postives = 584/643 (90.82%), Query Frame = 0


Query: 1   MYRCGRGVRLLSSASTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60
           M+R GRG+RLLSS+ST +RINWDPTV+LKLNHPSL+LLEKCNSR QFKQILGHMMRNNL+
Sbjct: 1   MFRYGRGIRLLSSSSTGRRINWDPTVNLKLNHPSLVLLEKCNSRIQFKQILGHMMRNNLM 60

Query: 61  GQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS 120
           GQTFP+SRLLFFSA+SHPENLE A+LLFNHFTP PN++IFNTMIL FSFS EKAFSIYSS
Sbjct: 61  GQTFPMSRLLFFSAISHPENLEWAVLLFNHFTPDPNVFIFNTMILAFSFSTEKAFSIYSS 120

Query: 121 MLQNGTYPDRQTFLYLLQTIKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDNGCFE 180
           MLQ G YPDRQT +YLLQT K VAE+KQIH HALV GLL+ E YL+NSLIK Y+DNGCF+
Sbjct: 121 MLQKGIYPDRQTLIYLLQTTKCVAELKQIHVHALVIGLLANEGYLQNSLIKMYLDNGCFD 180

Query: 181 CARQLFDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCG 240
            A Q+FDEMS R+VVSYN MI+G AK+G+IL +L+LFHDMR+HG EPDD TMLGL L CG
Sbjct: 181 SAHQVFDEMSSRDVVSYNIMIVGLAKMGDILEVLELFHDMRAHGFEPDDITMLGLFLSCG 240

Query: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300
           QLGE KLGKSVHAQI KS GSSNLILYNALLDMYVKCNELKLARKVFD  MEKD VSWNT
Sbjct: 241 QLGEVKLGKSVHAQIVKSNGSSNLILYNALLDMYVKCNELKLARKVFDMLMEKDVVSWNT 300

Query: 301 LIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360
           +IAGYAKVGELELAC++FNQIPTRDIVSWNSLISGYAQ+GDYV VK LFTRMFAENVKPD
Sbjct: 301 MIAGYAKVGELELACEVFNQIPTRDIVSWNSLISGYAQSGDYVMVKSLFTRMFAENVKPD 360

Query: 361 KVTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420
           KVT VN+ISA AEMGALDQGRWIHGLAVK    + AF GSALIDMYCKCGSIERA V+FN
Sbjct: 361 KVTTVNMISAVAEMGALDQGRWIHGLAVK-TQSLNAFLGSALIDMYCKCGSIERASVVFN 420

Query: 421 QIPEKDVTTWTAMITGFAFHGFGNKALELFSVMQTETKPNDVTFVSVLAACSHSGLVDEG 480
           QI EKDVT WT MITGFAFHG+GNKALELFS MQTETKPN+VTFVSVL ACSHSGLVDEG
Sbjct: 421 QIAEKDVTIWTTMITGFAFHGYGNKALELFSDMQTETKPNNVTFVSVLTACSHSGLVDEG 480

Query: 481 LKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540
           LK+FSSMKKRYSIEPGVEHYGCLVDLLCRSGRL DAIGVIEKMPMEPS+SIWGAVLSACR
Sbjct: 481 LKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLSDAIGVIEKMPMEPSQSIWGAVLSACR 540

Query: 541 MHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAGC 600
           MH NMELAE+AL ELLK EPEKEGGYILLSN+YATCGRW +SDSIREVMNSR VKKIAGC
Sbjct: 541 MHGNMELAEKALMELLKFEPEKEGGYILLSNMYATCGRWRHSDSIREVMNSRGVKKIAGC 600

Query: 601 SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVP 644
           SSV VDG VHDFTA+NKQHPRWMDICS LSFLT+EM+LE DVP
Sbjct: 601 SSVVVDGTVHDFTAANKQHPRWMDICSTLSFLTSEMKLEPDVP 642

[Close]

BLAST of Chy5G102390 vs. NCBI nr
Match: XP_004139380.1 (pentatricopeptide repeat-containing protein At3g04750, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 1289 bits (3336), Expect = 0.0
Identity = 636/651 (97.70%), Postives = 642/651 (98.62%), Query Frame = 0


Query: 1   MYRCGRGVRLLSSASTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60
           MYRCGRGVRLLSS STAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV
Sbjct: 1   MYRCGRGVRLLSSTSTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60

Query: 61  GQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS 120
           GQTFP+SRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGF FSNEKAF+IY S
Sbjct: 61  GQTFPMSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFPFSNEKAFTIYRS 120

Query: 121 MLQNGTYPDRQTFLYLLQTIKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDNGCFE 180
           MLQNGTYPDRQTFLYLLQT KFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRY+DNGCFE
Sbjct: 121 MLQNGTYPDRQTFLYLLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFE 180

Query: 181 CARQLFDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCG 240
           CARQLFDEMSDRNVVSYNTMILGFAKVGNILGIL+LFHDMRSHGLEPDDFTMLGLLLLCG
Sbjct: 181 CARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCG 240

Query: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300
           QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT
Sbjct: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300

Query: 301 LIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360
           +IAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD
Sbjct: 301 IIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360

Query: 361 KVTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420
           KVTIVNLISA AEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN
Sbjct: 361 KVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420

Query: 421 QIPEKDVTTWTAMITGFAFHGFGNKALELFSVMQTETKPNDVTFVSVLAACSHSGLVDEG 480
           QIPEKDVTTWT MITGFAFHGFGNKALELFSVMQ ETKPNDVTFVSVLAACSHSGLVDEG
Sbjct: 421 QIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAETKPNDVTFVSVLAACSHSGLVDEG 480

Query: 481 LKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540
           LK+FSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR
Sbjct: 481 LKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540

Query: 541 MHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAGC 600
           MHRNMELAERAL ELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSR VKKIAGC
Sbjct: 541 MHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGC 600

Query: 601 SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS 651
           SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS
Sbjct: 601 SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS 651

[Close]

BLAST of Chy5G102390 vs. NCBI nr
Match: XP_008455965.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g04750, mitochondrial [Cucumis melo] >KAA0063609.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18418.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1253 bits (3243), Expect = 0.0
Identity = 617/651 (94.78%), Postives = 635/651 (97.54%), Query Frame = 0


Query: 1   MYRCGRGVRLLSSASTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60
           MYR GRGVR LSSASTAKRINWDP VDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV
Sbjct: 1   MYRYGRGVRFLSSASTAKRINWDPAVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60

Query: 61  GQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS 120
           GQTFP+SRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS
Sbjct: 61  GQTFPMSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS 120

Query: 121 MLQNGTYPDRQTFLYLLQTIKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDNGCFE 180
           MLQNGTYP RQTFLYLLQT K VAEVKQIHCHALVFGLLSKEEYL+NSLIKRYIDNGCFE
Sbjct: 121 MLQNGTYPGRQTFLYLLQTTKSVAEVKQIHCHALVFGLLSKEEYLQNSLIKRYIDNGCFE 180

Query: 181 CARQLFDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCG 240
           CARQLFD+MS+ NVV+YNTMI+G A VGNILG+LKLFHDMRSHGLEPDDFTM+GLLLLCG
Sbjct: 181 CARQLFDKMSEPNVVAYNTMIVGLANVGNILGVLKLFHDMRSHGLEPDDFTMVGLLLLCG 240

Query: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300
           QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT
Sbjct: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300

Query: 301 LIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360
           +IAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD
Sbjct: 301 IIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360

Query: 361 KVTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420
            VTI+NLISA AEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN
Sbjct: 361 MVTIINLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420

Query: 421 QIPEKDVTTWTAMITGFAFHGFGNKALELFSVMQTETKPNDVTFVSVLAACSHSGLVDEG 480
           QIPEKDVTTWT MITGFAFHG GNKALELFSVMQTETKPNDVT VSVLAACSHSGLVDEG
Sbjct: 421 QIPEKDVTTWTTMITGFAFHGCGNKALELFSVMQTETKPNDVTLVSVLAACSHSGLVDEG 480

Query: 481 LKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540
           LK+FSSMKKRY+IEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR
Sbjct: 481 LKIFSSMKKRYTIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540

Query: 541 MHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAGC 600
           MHRNMELAERAL ELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSR VKKIAGC
Sbjct: 541 MHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGC 600

Query: 601 SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS 651
           SSVAVDGMVHDFTASNKQHPRWM+ICSILSFLT+EMRLEA++PSK+HLAT+
Sbjct: 601 SSVAVDGMVHDFTASNKQHPRWMEICSILSFLTSEMRLEANIPSKAHLATT 651

[Close]

BLAST of Chy5G102390 vs. NCBI nr
Match: XP_031736777.1 (pentatricopeptide repeat-containing protein At3g04750, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 1193 bits (3086), Expect = 0.0
Identity = 596/651 (91.55%), Postives = 602/651 (92.47%), Query Frame = 0


Query: 1   MYRCGRGVRLLSSASTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60
           MYRCGRGVRLLSS STAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV
Sbjct: 1   MYRCGRGVRLLSSTSTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60

Query: 61  GQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS 120
           GQTFP+                                        F FSNEKAF+IY S
Sbjct: 61  GQTFPMR---------------------------------------FPFSNEKAFTIYRS 120

Query: 121 MLQNGTYPDRQTFLYLLQTIKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDNGCFE 180
           MLQNGTYPDRQTFLYLLQT KFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRY+DNGCFE
Sbjct: 121 MLQNGTYPDRQTFLYLLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFE 180

Query: 181 CARQLFDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCG 240
           CARQLFDEMSDRNVVSYNTMILGFAKVGNILGIL+LFHDMRSHGLEPDDFTMLGLLLLCG
Sbjct: 181 CARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCG 240

Query: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300
           QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT
Sbjct: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300

Query: 301 LIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360
           +IAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD
Sbjct: 301 IIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360

Query: 361 KVTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420
           KVTIVNLISA AEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN
Sbjct: 361 KVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420

Query: 421 QIPEKDVTTWTAMITGFAFHGFGNKALELFSVMQTETKPNDVTFVSVLAACSHSGLVDEG 480
           QIPEKDVTTWT MITGFAFHGFGNKALELFSVMQ ETKPNDVTFVSVLAACSHSGLVDEG
Sbjct: 421 QIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAETKPNDVTFVSVLAACSHSGLVDEG 480

Query: 481 LKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540
           LK+FSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR
Sbjct: 481 LKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540

Query: 541 MHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAGC 600
           MHRNMELAERAL ELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSR VKKIAGC
Sbjct: 541 MHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGC 600

Query: 601 SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS 651
           SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS
Sbjct: 601 SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS 612

[Close]

BLAST of Chy5G102390 vs. NCBI nr
Match: XP_038890824.1 (pentatricopeptide repeat-containing protein At3g04750, mitochondrial [Benincasa hispida])

HSP 1 Score: 1179 bits (3051), Expect = 0.0
Identity = 578/651 (88.79%), Postives = 616/651 (94.62%), Query Frame = 0


Query: 1   MYRCGRGVRLLSSASTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60
           MYR GRG+RLLSSAST KRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV
Sbjct: 1   MYRFGRGIRLLSSASTGKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60

Query: 61  GQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS 120
           GQTFP+SRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFS EKAF+IYSS
Sbjct: 61  GQTFPMSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSTEKAFTIYSS 120

Query: 121 MLQNGTYPDRQTFLYLLQTIKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDNGCFE 180
           MLQNGTYPDRQTFLYLLQT KFVAEVKQIHCHALV G LSKEEYL+NSL+KRYIDNGCF 
Sbjct: 121 MLQNGTYPDRQTFLYLLQTTKFVAEVKQIHCHALVVGFLSKEEYLQNSLVKRYIDNGCFG 180

Query: 181 CARQLFDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCG 240
            ARQLFDEMS R++VSYN MI+G AK+G+ILG+L+LFHD+ SH LEPDD TMLGLLLLCG
Sbjct: 181 SARQLFDEMSGRDIVSYNIMIVGLAKMGDILGVLELFHDLGSHDLEPDDITMLGLLLLCG 240

Query: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300
           QLGE KLGKSVHAQIEKS GSSNLILYNALLDMYVKCNE+KLARKVFD PMEKDTVSWNT
Sbjct: 241 QLGEAKLGKSVHAQIEKSNGSSNLILYNALLDMYVKCNEIKLARKVFDRPMEKDTVSWNT 300

Query: 301 LIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360
           +IAGYAK+GELELAC++FNQIPT+DIVSWNSLISGYA+NG YV VK LFTRMFAENVKPD
Sbjct: 301 IIAGYAKIGELELACEVFNQIPTKDIVSWNSLISGYAENGAYVMVKSLFTRMFAENVKPD 360

Query: 361 KVTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420
            VT+V LISA AEMGALDQGRWIHGLAVKM TKI+AFSGSALIDMYCKCGSIERAFV+FN
Sbjct: 361 MVTMVILISAVAEMGALDQGRWIHGLAVKMQTKIDAFSGSALIDMYCKCGSIERAFVVFN 420

Query: 421 QIPEKDVTTWTAMITGFAFHGFGNKALELFSVMQTETKPNDVTFVSVLAACSHSGLVDEG 480
           QI EKDVTTWT MITGFAFHG+G K+LELFS MQTETKPNDVTFVSVLAACSHSGLVDEG
Sbjct: 421 QISEKDVTTWTTMITGFAFHGYGKKSLELFSNMQTETKPNDVTFVSVLAACSHSGLVDEG 480

Query: 481 LKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540
           LK+FSSM+KRYSIEPGVEHYGCLVDLLCRSGRLLDAI VIEKMPMEPS+SIWGAVLSACR
Sbjct: 481 LKIFSSMRKRYSIEPGVEHYGCLVDLLCRSGRLLDAIDVIEKMPMEPSQSIWGAVLSACR 540

Query: 541 MHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAGC 600
           MHRNMELAERAL ELLKLEPE+E GY+LLSNVYATCGRW YSDSIRE+MNSR VKKIAGC
Sbjct: 541 MHRNMELAERALMELLKLEPEEESGYVLLSNVYATCGRWGYSDSIRELMNSRGVKKIAGC 600

Query: 601 SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS 651
           SSV VDGMVHDFTA+NKQH RWMDICS+LSFLT+EMRLEA+VPS+++LATS
Sbjct: 601 SSVVVDGMVHDFTAANKQHRRWMDICSMLSFLTSEMRLEANVPSQANLATS 651

[Close]

BLAST of Chy5G102390 vs. NCBI nr
Match: XP_023545697.1 (pentatricopeptide repeat-containing protein At3g04750, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1131 bits (2926), Expect = 0.0
Identity = 554/651 (85.10%), Postives = 598/651 (91.86%), Query Frame = 0


Query: 1   MYRCGRGVRLLSSASTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLV 60
           M+R GRGVRLLSS+ST +RINWDPTV+LKLNHPSL+LLEKCNSR QFKQILGHMMRNNL+
Sbjct: 1   MFRYGRGVRLLSSSSTGRRINWDPTVNLKLNHPSLVLLEKCNSRIQFKQILGHMMRNNLM 60

Query: 61  GQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSS 120
           GQTFP+SRLLFFSAVSHPENLE AILLFNHFTP PN++IFNTMILGFSFS EKAFSIYSS
Sbjct: 61  GQTFPMSRLLFFSAVSHPENLEWAILLFNHFTPDPNVFIFNTMILGFSFSTEKAFSIYSS 120

Query: 121 MLQNGTYPDRQTFLYLLQTIKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDNGCFE 180
           MLQ G YPDRQT LYLLQ  K VAE+KQIH HALV GLL+ E YL+NSLIK Y+DNGCF 
Sbjct: 121 MLQKGIYPDRQTLLYLLQITKCVAELKQIHVHALVIGLLANEGYLQNSLIKMYLDNGCFG 180

Query: 181 CARQLFDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCG 240
            ARQ+FDEMS R+VVSYN MI+G AK+G+ILG+L+LFHDMR+HG EPDD TMLGL L CG
Sbjct: 181 SARQMFDEMSSRDVVSYNIMIVGLAKMGDILGVLELFHDMRAHGFEPDDITMLGLFLSCG 240

Query: 241 QLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNT 300
           QLGE KLGKSVHAQI KS GSSNLILYNALLDMYVKCNELKLARKVFD PMEKD VSWNT
Sbjct: 241 QLGEVKLGKSVHAQIVKSNGSSNLILYNALLDMYVKCNELKLARKVFDMPMEKDAVSWNT 300

Query: 301 LIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPD 360
           +IAGYAKVGELELAC++FNQIPTRDIVSWNSLISGYAQNGDYV VK LFTRMFAENVKPD
Sbjct: 301 MIAGYAKVGELELACEVFNQIPTRDIVSWNSLISGYAQNGDYVMVKSLFTRMFAENVKPD 360

Query: 361 KVTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFN 420
           KVT+V++ISA AEMGALDQGRWIHGLAVK+  KI+AFSGSALIDMYCKCGSIERA V+FN
Sbjct: 361 KVTMVHMISAVAEMGALDQGRWIHGLAVKIQIKIDAFSGSALIDMYCKCGSIERASVVFN 420

Query: 421 QIPEKDVTTWTAMITGFAFHGFGNKALELFSVMQTETKPNDVTFVSVLAACSHSGLVDEG 480
           QI EKDVT WT MITGFAFHG+GNKALELFS MQTETKPNDVTFVSVL ACSHSGL+DEG
Sbjct: 421 QISEKDVTIWTTMITGFAFHGYGNKALELFSDMQTETKPNDVTFVSVLTACSHSGLIDEG 480

Query: 481 LKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 540
           LK+FSSMK RYSIEPGVEH+GCLVDLLCRSGRL DAIGV+EKMPM+PS+SIWGAVLSACR
Sbjct: 481 LKIFSSMKNRYSIEPGVEHFGCLVDLLCRSGRLSDAIGVVEKMPMKPSQSIWGAVLSACR 540

Query: 541 MHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAGC 600
           MH NMELAE+AL ELLK EPEKEGGYILLSNVYATCGRWS+SDSIREVMNSR VKKIAGC
Sbjct: 541 MHGNMELAEKALMELLKFEPEKEGGYILLSNVYATCGRWSHSDSIREVMNSRGVKKIAGC 600

Query: 601 SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVPSKSHLATS 651
           SSV VDG VHDFTA+NKQHPRWMDICS LSFLT+EM+LE DVPS++HLA S
Sbjct: 601 SSVVVDGTVHDFTAANKQHPRWMDICSTLSFLTSEMKLEPDVPSQAHLANS 651

[Close]

BLAST of Chy5G102390 vs. TAIR 10
Match: AT3G04750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 712.2 bits (1837), Expect = 3.8e-205
Identity = 356/643 (55.37%), Postives = 462/643 (71.85%), Query Frame = 0


Query: 6   RGVRLLSSASTAKRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLVGQTFP 65
           RG RL  +   +K   WDP   L+LNH SL+LLE CNSR QFKQ+L  +MR NL+  TFP
Sbjct: 9   RGFRLFGTECGSKTTKWDPVQSLQLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFP 68

Query: 66  LSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFSFSNEKAFSIYSSMLQNG 125
           +SRL+FFSA+++PENL+LA LLF +FTP PN++++NTMI   S S  + F +YSSM+++ 
Sbjct: 69  MSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFGLYSSMIRHR 128

Query: 126 TYPDRQTFLYLLQTIKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDNGCFECARQL 185
             PDRQTFLYL++   F++EVKQIHCH +V G LS   YL NSL+K Y++ G F  A ++
Sbjct: 129 VSPDRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKV 188

Query: 186 FDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCGQLGET 245
           F  M   +V S+N MI+G+AK G  L  LKL+  M S G+EPD++T+L LL+ CG L + 
Sbjct: 189 FARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDI 248

Query: 246 KLGKSVHAQIEK--SIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTLIA 305
           +LGK VH  IE+   + SSNLIL NALLDMY KC E  LA++ FD   +KD  SWNT++ 
Sbjct: 249 RLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVV 308

Query: 306 GYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNG-DYVTVKCLFTRM-FAENVKPDK 365
           G+ ++G++E A  +F+Q+P RD+VSWNSL+ GY++ G D  TV+ LF  M   E VKPD+
Sbjct: 309 GFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDR 368

Query: 366 VTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQ 425
           VT+V+LIS AA  G L  GRW+HGL +++  K +AF  SALIDMYCKCG IERAF++F  
Sbjct: 369 VTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT 428

Query: 426 IPEKDVTTWTAMITGFAFHGFGNKALELFSVMQTE-TKPNDVTFVSVLAACSHSGLVDEG 485
             EKDV  WT+MITG AFHG G +AL+LF  MQ E   PN+VT ++VL ACSHSGLV+EG
Sbjct: 429 ATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG 488

Query: 486 LKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIE-KMPMEPSRSIWGAVLSAC 545
           L VF+ MK ++  +P  EHYG LVDLLCR+GR+ +A  +++ KMPM PS+S+WG++LSAC
Sbjct: 489 LHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSAC 548

Query: 546 RMHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAG 605
           R   ++E AE ALTELLKLEPEKEGGY+LLSN+YAT GRW YSD  RE M +R VKK AG
Sbjct: 549 RGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAG 608

Query: 606 CSSVAVDGMVHDFTASNKQ-HPRWMDICSILSFLTNEMRLEAD 642
            SSV     +H F A+ KQ HPRW +I  IL  L NEM+ + D
Sbjct: 609 YSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMKPKLD 651

[Close]

BLAST of Chy5G102390 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 453.8 bits (1166), Expect = 2.4e-127
Identity = 235/594 (39.56%), Postives = 361/594 (60.77%), Query Frame = 0


Query: 37  LLEKCNSRTQFKQILGHMMRNNLVGQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPN 96
           L+E+C S  Q KQ  GHM+R       +  S+L   +A+S   +LE A  +F+   P PN
Sbjct: 36  LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI-PKPN 95

Query: 97  LYIFNTMILGFSFSNEKAFSIYS---SMLQNGTYPDRQTFLYLLQTIKFVAEVKQIHCHA 156
            + +NT+I  ++   +   SI++    + ++  YP++ TF +L   IK  AEV  +    
Sbjct: 96  SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL---IKAAAEVSSLSLGQ 155

Query: 157 LVFGLLSK-----EEYLRNSLIKRYIDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVG 216
            + G+  K     + ++ NSLI  Y   G  + A ++F  + +++VVS+N+MI GF + G
Sbjct: 156 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 215

Query: 217 NILGILKLFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYN 276
           +    L+LF  M S  ++    TM+G+L  C ++   + G+ V + IE++  + NL L N
Sbjct: 216 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 275

Query: 277 ALLDMYVKCNELKLARKVFDGPMEKDTVSWNTLIAGYAKVGELELACDLFNQIPTRDIVS 336
           A+LDMY KC  ++ A+++FD   EKD V+W T++ GYA   + E A ++ N +P +DIV+
Sbjct: 276 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 335

Query: 337 WNSLISGYAQNGDYVTVKCLFTRM-FAENVKPDKVTIVNLISAAAEMGALDQGRWIHGLA 396
           WN+LIS Y QNG       +F  +   +N+K +++T+V+ +SA A++GAL+ GRWIH   
Sbjct: 336 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 395

Query: 397 VKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTAMITGFAFHGFGNKAL 456
            K   ++     SALI MY KCG +E++  +FN + ++DV  W+AMI G A HG GN+A+
Sbjct: 396 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 455

Query: 457 ELFSVMQ-TETKPNDVTFVSVLAACSHSGLVDEGLKVFSSMKKRYSIEPGVEHYGCLVDL 516
           ++F  MQ    KPN VTF +V  ACSH+GLVDE   +F  M+  Y I P  +HY C+VD+
Sbjct: 456 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 515

Query: 517 LCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERALTELLKLEPEKEGGY 576
           L RSG L  A+  IE MP+ PS S+WGA+L AC++H N+ LAE A T LL+LEP  +G +
Sbjct: 516 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAH 575

Query: 577 ILLSNVYATCGRWSYSDSIREVMNSREVKKIAGCSSVAVDGMVHDFTASNKQHP 621
           +LLSN+YA  G+W     +R+ M    +KK  GCSS+ +DGM+H+F + +  HP
Sbjct: 576 VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHP 625

[Close]

BLAST of Chy5G102390 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 432.6 bits (1111), Expect = 5.8e-121
Identity = 247/666 (37.09%), Postives = 357/666 (53.60%), Query Frame = 0


Query: 23  DPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLVGQTFPLSRLLFFSAVS-HPENL 82
           DP  D   NHPSL LL  C +    + I   M++  L    + LS+L+ F  +S H E L
Sbjct: 25  DPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGL 84

Query: 83  ELAILLFNHFTPYPNLYIFNTMILGFSFSNE--KAFSIYSSMLQNGTYPDRQTFLYLLQT 142
             AI +F      PNL I+NTM  G + S++   A  +Y  M+  G  P+  TF ++L++
Sbjct: 85  PYAISVFKTIQE-PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 144

Query: 143 I---KFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYIDN-------------------- 202
               K   E +QIH H L  G    + Y+  SLI  Y+ N                    
Sbjct: 145 CAKSKAFKEGQQIHGHVLKLG-CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 204

Query: 203 -----------GCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGL 262
                      G  E A++LFDE+  ++VVS+N MI G+A+ GN    L+LF DM    +
Sbjct: 205 YTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV 264

Query: 263 EPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARK 322
            PD+ TM+ ++  C Q G  +LG+ VH  I+     SNL + NAL+D+Y KC        
Sbjct: 265 RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC-------- 324

Query: 323 VFDGPMEKDTVSWNTLIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTV 382
                                  GELE AC LF ++P +D++SWN+LI GY     Y   
Sbjct: 325 -----------------------GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 384

Query: 383 KCLFTRMFAENVKPDKVTIVNLISAAAEMGALDQGRWIHGLAVKMLTKIEAFSG--SALI 442
             LF  M      P+ VT+++++ A A +GA+D GRWIH    K L  +   S   ++LI
Sbjct: 385 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 444

Query: 443 DMYCKCGSIERAFVIFNQIPEKDVTTWTAMITGFAFHGFGNKALELFSVM-QTETKPNDV 502
           DMY KCG IE A  +FN I  K +++W AMI GFA HG  + + +LFS M +   +P+D+
Sbjct: 445 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 504

Query: 503 TFVSVLAACSHSGLVDEGLKVFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEK 562
           TFV +L+ACSHSG++D G  +F +M + Y + P +EHYGC++DLL  SG   +A  +I  
Sbjct: 505 TFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINM 564

Query: 563 MPMEPSRSIWGAVLSACRMHRNMELAERALTELLKLEPEKEGGYILLSNVYATCGRWSYS 622
           M MEP   IW ++L AC+MH N+EL E     L+K+EPE  G Y+LLSN+YA+ GRW+  
Sbjct: 565 MEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV 624

Query: 623 DSIREVMNSREVKKIAGCSSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADV 649
              R ++N + +KK+ GCSS+ +D +VH+F   +K HPR  +I  +L  +   +     V
Sbjct: 625 AKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFV 657

[Close]

BLAST of Chy5G102390 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 430.6 bits (1106), Expect = 2.2e-120
Identity = 226/633 (35.70%), Postives = 357/633 (56.40%), Query Frame = 0


Query: 18  KRINWDPTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLVGQTFPLSRLLFFSAVSH 77
           K INW+ T    L++P L LLEKC      KQI   M+ N L+   F  SRL+ F A+S 
Sbjct: 40  KPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSE 99

Query: 78  PENLELAILLFNHFTPYPNLYIFNTMILGFSFSN--EKAFSIYSSMLQNGTYPDRQTFLY 137
              L+ ++ +       PN++ +N  I GFS S   +++F +Y  ML++G    R     
Sbjct: 100 SRYLDYSVKILKGI-ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFT 159

Query: 138 LLQTIKFVAEVKQIHCHALVFGLLSK-----EEYLRNSLIKRYIDNGCFECARQLFDEMS 197
                K  A+++      ++ G + K       ++ N+ I  +   G  E AR++FDE  
Sbjct: 160 YPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESP 219

Query: 198 DRNVVSYNTMILGFAKVGNILGILKLFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKS 257
            R++VS+N +I G+ K+G     + ++  M S G++PDD TM+GL+  C  LG+   GK 
Sbjct: 220 VRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKE 279

Query: 258 VHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTLIAGYAKVGE 317
            +  ++++     + L NAL+DM+ KC ++  AR++FD   ++  VSW T+I+GYA+ G 
Sbjct: 280 FYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGL 339

Query: 318 LELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISA 377
           L+++  LF+ +  +D+V WN++I G  Q         LF  M   N KPD++T+++ +SA
Sbjct: 340 LDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSA 399

Query: 378 AAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTW 437
            +++GALD G WIH    K    +    G++L+DMY KCG+I  A  +F+ I  ++  T+
Sbjct: 400 CSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTY 459

Query: 438 TAMITGFAFHGFGNKALELFSVM-QTETKPNDVTFVSVLAACSHSGLVDEGLKVFSSMKK 497
           TA+I G A HG  + A+  F+ M      P+++TF+ +L+AC H G++  G   FS MK 
Sbjct: 460 TAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKS 519

Query: 498 RYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAE 557
           R+++ P ++HY  +VDLL R+G L +A  ++E MPME   ++WGA+L  CRMH N+EL E
Sbjct: 520 RFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGE 579

Query: 558 RALTELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSREVKKIAGCSSVAVDGMV 617
           +A  +LL+L+P   G Y+LL  +Y     W  +   R +MN R V+KI GCSS+ V+G+V
Sbjct: 580 KAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIV 639

Query: 618 HDFTASNKQHPRWMDICSILSFLTNEMRLEADV 643
            +F   +K  P    I   L  L   MR    V
Sbjct: 640 CEFIVRDKSRPESEKIYDRLHCLGRHMRSSLSV 671

[Close]

BLAST of Chy5G102390 vs. TAIR 10
Match: AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 394.8 bits (1013), Expect = 1.3e-109
Identity = 212/619 (34.25%), Postives = 346/619 (55.90%), Query Frame = 0


Query: 37  LLEKCNSRTQFKQILGHMMRNNLVGQTFPLSRLLFFSAVSHPENLELAILLFNHFTPYPN 96
           +L  C +  QFKQ+    +   +        +L  F       ++  A  LF    P P+
Sbjct: 40  ILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKI-PEPD 99

Query: 97  LYIFNTMILGFS--FSNEKAFSIYSSMLQNGTYPDRQTFLYLLQTIK----FVAEVKQIH 156
           + ++N MI G+S    + +   +Y +ML+ G  PD  TF +LL  +K     +A  K++H
Sbjct: 100 VVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLH 159

Query: 157 CHALVFGLLSKEEYLRNSLIKRYIDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNI 216
           CH + FG L    Y++N+L+K Y   G  + AR +FD     +V S+N MI G+ ++   
Sbjct: 160 CHVVKFG-LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEY 219

Query: 217 LGILKLFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNAL 276
              ++L  +M  + + P   T+L +L  C ++ +  L K VH  + +     +L L NAL
Sbjct: 220 EESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENAL 279

Query: 277 LDMYVKCNELKLARKVFDGPMEKDTVSWNTLIAGYAKVGELELACDLFNQIPTRDIVSWN 336
           ++ Y  C E+ +A ++F     +D +SW +++ GY + G L+LA   F+Q+P RD +SW 
Sbjct: 280 VNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWT 339

Query: 337 SLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAAAEMGALDQGRWIHGLAVKM 396
            +I GY + G +     +F  M +  + PD+ T+V++++A A +G+L+ G WI     K 
Sbjct: 340 IMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKN 399

Query: 397 LTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTAMITGFAFHGFGNKALELF 456
             K +   G+ALIDMY KCG  E+A  +F+ + ++D  TWTAM+ G A +G G +A+++F
Sbjct: 400 KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVF 459

Query: 457 SVMQ-TETKPNDVTFVSVLAACSHSGLVDEGLKVFSSMKKRYSIEPGVEHYGCLVDLLCR 516
             MQ    +P+D+T++ VL+AC+HSG+VD+  K F+ M+  + IEP + HYGC+VD+L R
Sbjct: 460 FQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGR 519

Query: 517 SGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERALTELLKLEPEKEGGYILL 576
           +G + +A  ++ KMPM P+  +WGA+L A R+H +  +AE A  ++L+LEP+    Y LL
Sbjct: 520 AGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALL 579

Query: 577 SNVYATCGRWSYSDSIREVMNSREVKKIAGCSSVAVDGMVHDFTASNKQHPRWMDICSIL 636
            N+YA C RW     +R  +    +KK  G S + V+G  H+F A +K H +  +I   L
Sbjct: 580 CNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKL 639

Query: 637 SFLTNEMRLEADVPSKSHL 649
             L  E    A +P  S L
Sbjct: 640 EELAQESTFAAYLPDTSEL 656

The following BLAST results are available for this feature:

BLAST of Chy5G102390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR01	5.3e-204	55.37	Pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Arabidop...	[more]
O82380	3.4e-126	39.56	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9LN01	8.1e-120	37.09	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SJZ3	3.1e-119	35.70	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]
Q9LSB8	1.9e-108	34.25	Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th...	[more]

BLAST of Chy5G102390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLC7	0.0e+00	97.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011440 PE=4 SV=1	[more]
A0A5A7VDK5	0.0e+00	94.78	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C3D7	0.0e+00	94.78	pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Cucumis ...	[more]
A0A6J1G2K1	0.0e+00	84.64	pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Cucurbit...	[more]
A0A6J1KH03	0.0e+00	84.14	pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Cucurbit...	[more]

BLAST of Chy5G102390 vs. NCBI nr


Match Name	Identity	Description
XP_004139380.1	97.70	pentatricopeptide repeat-containing protein At3g04750, mitochondrial isoform X1 ...	[more]
XP_008455965.1	94.78	PREDICTED: pentatricopeptide repeat-containing protein At3g04750, mitochondrial ...	[more]
XP_031736777.1	91.55	pentatricopeptide repeat-containing protein At3g04750, mitochondrial isoform X2 ...	[more]
XP_038890824.1	88.79	pentatricopeptide repeat-containing protein At3g04750, mitochondrial [Benincasa ...	[more]
XP_023545697.1	85.10	pentatricopeptide repeat-containing protein At3g04750, mitochondrial [Cucurbita ...	[more]

BLAST of Chy5G102390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04750.1	3.8e-205	55.37	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G29760.1	2.4e-127	39.56	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	5.8e-121	37.09	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G22410.1	2.2e-120	35.70	SLOW GROWTH 1	[more]
AT3G15930.1	1.3e-109	34.25	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 34..140 e-value: 8.4E-6 score: 27.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 141..262 e-value: 1.3E-18 score: 69.5 coord: 289..396 e-value: 1.6E-21 score: 79.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 399..612 e-value: 5.7E-40 score: 139.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 400..426 e-value: 0.0023 score: 18.0 coord: 499..524 e-value: 0.021 score: 15.1 coord: 296..324 e-value: 6.8E-6 score: 26.0 coord: 462..490 e-value: 3.7E-4 score: 20.6 coord: 429..454 e-value: 8.0E-5 score: 22.6 coord: 266..288 e-value: 0.087 score: 13.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 167..195 e-value: 1.4E-4 score: 19.8 coord: 296..327 e-value: 2.2E-6 score: 25.5 coord: 327..360 e-value: 1.0E-6 score: 26.5 coord: 462..495 e-value: 2.1E-4 score: 19.3 coord: 195..228 e-value: 6.1E-8 score: 30.4 coord: 401..427 e-value: 0.0029 score: 15.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 192..234 e-value: 8.2E-11 score: 41.9 coord: 325..370 e-value: 1.2E-7 score: 31.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 193..227 score: 11.980759
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 325..359 score: 11.334042
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 395..429 score: 8.670445
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 294..324 score: 9.810421
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 460..490 score: 9.163705
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 119..605
None	No IPR available	PANTHER	PTHR47928:SF129	METHYLTRANSFERASE SMALL DOMAIN	coord: 119..605

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G102390.1	Chy5G102390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding