Chy5G101940 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G101940
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Disease resistance protein RPP4-like
Location	chrH05: 15937015 .. 15937851 (+)
RNA-Seq Expression	Chy5G101940
Synteny	Chy5G101940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGATGTTGTTACAATGCTAGGAGTATATGGGATTGGAGGCATTGGTAAGACAACTTTGGCCAAAGCTTTATACAACAAAATTGCCAATCAATTTGAAGGTTGCAGCTTTGTTGCAAATGTCAGAGAAGCTTCAAAGCAGTTTAATGGCCTTCTAAATCTGCAAGAAATGCTACTCTCTGAGATCTTGATGTGTGACTTCATCAAGATTGGCAATCTTGTTCATAGAAACACCAACATTATAAGGGATAGATTACACTCAAAAAGAATTTTTCTAGTTCTTGATGATATTGATGACTACAAGCAGCTGTAAATATACTTGGCTGGTAAGCTTCATTGGTTTGGTCATGGAAGTAAGATCATTGTAACAACGAGAGACACATATTTGATTTCCAAATTCGACAAACTATATCTTCTCCAAGGATTGAGCTGTGACAAAGCCCTTGAGCTTTTTAGTTGGCATGCTTTTAAGAAAATTATCAGTGTAATATATACCAAGCGACTATTTAGACCTTTCGAAACAAGCAGTAGATTATTGTAAAGGTCTTCCTTTGGGTCTTGAGGTATTGGGTTCTTTCCTTTACAACAGAGATCAATCTAAATGGAAAAGTATATTGGATTCACATGAGAAATCCTCCCTTCACAAACGCATTCAAGAGATTCTTCAAATAAGTTACAATGGACTTGAAGATGAAATAAAGGAGTTGTTTCTCGATATTTCTTGCTTATTTGTTGGAGAGCACACATTGATAATGTTAAAATGTTTTTAGACGCATGCGATTCTTATCCAAAACACTAATGCTTCATTTATTTCAACAGAACACAGTATGCATGA

mRNA sequence

ATGTCTGATGTTGTTACAATGCTAGGAGTATATGGGATTGGAGGCATTGGTAAGACAACTTTGGCCAAAGCTTTATACAACAAAATTGCCAATCAATTTGAAGGTTGCAGCTTTGTTGCAAATGTCAGAGAAGCTTCAAAGCAGTTTAATGGCCTTCTAAATCTGCAAGAAATGCTACTCTCTGAGATCTTGATGTGTGACTTCATCAAGATTGGCAATCTTGTTCATAGAAACACCAACATTATAAGGGATAGATTACACTCAAAAAGAATTTTTCTAGTTCTTGATGATATTGATGACTACAAGCAGCTAACACAGTATGCATGA

Coding sequence (CDS)

ATGTCTGATGTTGTTACAATGCTAGGAGTATATGGGATTGGAGGCATTGGTAAGACAACTTTGGCCAAAGCTTTATACAACAAAATTGCCAATCAATTTGAAGGTTGCAGCTTTGTTGCAAATGTCAGAGAAGCTTCAAAGCAGTTTAATGGCCTTCTAAATCTGCAAGAAATGCTACTCTCTGAGATCTTGATGTGTGACTTCATCAAGATTGGCAATCTTGTTCATAGAAACACCAACATTATAAGGGATAGATTACACTCAAAAAGAATTTTTCTAGTTCTTGATGATATTGATGACTACAAGCAGCTAACACAGTATGCATGA

Protein sequence

MSDVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLLSEILMCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQLTQYA*

Homology

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BLAST of Chy5G101940 vs. ExPASy Swiss-Prot
Match: V9M2S5 (Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-17
Identity = 49/104 (47.12%), Postives = 73/104 (70.19%), Query Frame = 0


Query: 2   SDVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLLS 61
           S  V M+G+YG+GGIGKTT+AK +YN+++ +FE  SF+ N+RE S     L +LQ  LL 
Sbjct: 214 SSDVRMVGIYGVGGIGKTTIAKVIYNELSCEFEYMSFLENIREGSNP-QVLFHLQNQLLG 273

Query: 62  EILMCDFIK-IGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQL 105
           +IL  +  + I ++ HR  ++I+D L S+R+F+VLDD+DD  QL
Sbjct: 274 DILEGEGSQNISSVAHR-ASMIKDILLSRRVFIVLDDVDDLSQL 315

[Close]

BLAST of Chy5G101940 vs. ExPASy Swiss-Prot
Match: V9M398 (Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.8e-17
Identity = 49/105 (46.67%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 2   SDVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFN--GLLNLQEML 61
           S  V M+G+YG+GGIGKTT+AK +YN+++ +FE  SF+ N+RE   +FN  G+  LQ  L
Sbjct: 219 SSDVRMVGMYGVGGIGKTTIAKVIYNELSREFEYMSFLENIRE---KFNTQGVSPLQNQL 278

Query: 62  LSEILMCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQL 105
           L +IL  +  +  N V    ++I+D L SK +F+VLDD+DD  QL
Sbjct: 279 LDDILKGEGSQNINSVAHGASMIKDILSSKIVFIVLDDVDDQSQL 320

[Close]

BLAST of Chy5G101940 vs. ExPASy Swiss-Prot
Match: Q40253 (Disease resistance protein L6 OS=Linum usitatissimum OX=4006 GN=L6 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.1e-16
Identity = 46/100 (46.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 2   SDVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLLS 61
           S+ VTM+G+YG+GGIGKTT AKA+YNKI++ F+ C F+ N+RE  ++ +G++ LQ+ L+S
Sbjct: 255 SENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDCCCFIDNIRETQEK-DGVVVLQKKLVS 314

Query: 62  EILMCDFIKIG-NLVHRNTNIIRDRLHSKRIFLVLDDIDD 101
           EIL  D   +G N        I++R+   +I +VLDD+D+
Sbjct: 315 EILRIDSGSVGFNNDSGGRKTIKERVSRFKILVVLDDVDE 353

[Close]

BLAST of Chy5G101940 vs. ExPASy Swiss-Prot
Match: Q9SZ66 (Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 9.4e-13
Identity = 43/102 (42.16%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 3   DVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLLSE 62
           D V ++G+ G+ GIGKTTLA  LY ++  QF+G  F+ N+RE S + +GL +L + L S 
Sbjct: 207 DTVHIIGIVGMVGIGKTTLADCLYGRMRGQFDGSCFLTNIRENSGR-SGLESLLQKLFST 266

Query: 63  ILMCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQL 105
           +L    ++IG   + +    R RL SKR+ +VLDD++D KQ+
Sbjct: 267 VLNDRDLEIGAPGNAHERFER-RLKSKRLLIVLDDVNDEKQI 306

[Close]

BLAST of Chy5G101940 vs. ExPASy Swiss-Prot
Match: A0A290U7C4 (Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-11
Identity = 39/100 (39.00%), Postives = 65/100 (65.00%), Query Frame = 0


Query: 5   VTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLLSEIL 64
           V ++G++G+GG+GKTT A+AL+N+    FE   F+ +V+E   Q + LL LQ+ LLS++L
Sbjct: 211 VRLVGIWGMGGVGKTTAARALFNRYYQNFESACFLEDVKE-YLQHHTLLYLQKTLLSKLL 270

Query: 65  MCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQL 105
             +F+   +       I++ RL SK++ +VLDD++   QL
Sbjct: 271 KVEFVDCTD-TEEMCVILKRRLCSKKVLVVLDDVNHNDQL 308

[Close]

BLAST of Chy5G101940 vs. ExPASy TrEMBL
Match: A0A1S3BZ02 (LOW QUALITY PROTEIN: disease resistance protein RPP4-like OS=Cucumis melo OX=3656 GN=LOC103494972 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 9.7e-29
Identity = 71/100 (71.00%), Postives = 85/100 (85.00%), Query Frame = 0


Query: 5   VTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLLSEIL 64
           V M+G+YGIGGIGKTTLAKALYNKIA+QFEGC F++NVREASK+FNGL  LQE LL EIL
Sbjct: 227 VYMVGIYGIGGIGKTTLAKALYNKIASQFEGCCFLSNVREASKRFNGLAQLQESLLYEIL 286

Query: 65  MCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQL 105
           M D +K+ NL  R  NIIR+RLHSK++F+VLDD+D  +QL
Sbjct: 287 M-DDLKVVNL-DRGINIIRNRLHSKKVFIVLDDVDKLEQL 324

[Close]

BLAST of Chy5G101940 vs. ExPASy TrEMBL
Match: D9I8I6 (TIR-CC-NBS-AAA+ATPase class resistance protein OS=Cucumis sativus OX=3659 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.4e-27
Identity = 68/108 (62.96%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 1   MSDVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLL 60
           MS+ +TM+G+YGIGG+GKTTLAKALYNKI++ FEGC F+ANVREAS Q+ GL+ LQ+ L+
Sbjct: 208 MSNEITMVGLYGIGGMGKTTLAKALYNKISDDFEGCCFLANVREASNQYRGLVELQKTLI 267

Query: 61  SEILMCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQLTQYA 109
            EILM D IK+ N V    +IIRDRL SK+I L+LDDID ++QL   A
Sbjct: 268 REILMDDSIKVSN-VGIGISIIRDRLCSKKIILILDDIDTHEQLQALA 314

[Close]

BLAST of Chy5G101940 vs. ExPASy TrEMBL
Match: A0A0A0LLK3 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G020890 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.4e-27
Identity = 71/102 (69.61%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 3   DVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLLSE 62
           D V M+G+YGIGGIGKTTLAKALYNKIANQFEG  F++NVRE SKQFNGL+ LQE LL E
Sbjct: 217 DGVYMMGIYGIGGIGKTTLAKALYNKIANQFEGFCFLSNVRETSKQFNGLVQLQEKLLYE 276

Query: 63  ILMCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQL 105
           IL  D +KIGNL     NIIR RL SK++ +VLDD+D  KQL
Sbjct: 277 ILKFD-LKIGNL-DEGINIIRSRLRSKKVLIVLDDVDKLKQL 316

[Close]

BLAST of Chy5G101940 vs. ExPASy TrEMBL
Match: A0A5D3D443 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00110 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.8e-27
Identity = 69/100 (69.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 5   VTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLLSEIL 64
           + M+G+YGIGGIGKTTLAKALYNKIA+QFEGC F++NVREASKQFNGL  LQE LL EIL
Sbjct: 228 IYMVGIYGIGGIGKTTLAKALYNKIASQFEGCCFLSNVREASKQFNGLAQLQESLLYEIL 287

Query: 65  MCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQL 105
           M D +K+ NL  R  NIIR+RL SK++ +VLDD+D  +QL
Sbjct: 288 MVD-LKVVNL-DRGINIIRNRLCSKKVLIVLDDVDKLEQL 325

[Close]

BLAST of Chy5G101940 vs. ExPASy TrEMBL
Match: A0A5A7TWK7 (TIR-NBS-LRR disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00340 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.8e-27
Identity = 69/100 (69.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 5   VTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLLSEIL 64
           + M+G+YGIGGIGKTTLAKALYNKIA+QFEGC F++NVREASKQFNGL  LQE LL EIL
Sbjct: 228 IYMVGIYGIGGIGKTTLAKALYNKIASQFEGCCFLSNVREASKQFNGLAQLQESLLYEIL 287

Query: 65  MCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQL 105
           M D +K+ NL  R  NIIR+RL SK++ +VLDD+D  +QL
Sbjct: 288 MVD-LKVVNL-DRGINIIRNRLCSKKVLIVLDDVDKLEQL 325

[Close]

BLAST of Chy5G101940 vs. NCBI nr
Match: XP_038889350.1 (disease resistance protein RPV1-like [Benincasa hispida])

HSP 1 Score: 142 bits (359), Expect = 8.85e-37
Identity = 72/108 (66.67%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 1   MSDVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLL 60
           MSD +TM G+YGIGG+GKTTLAKALYNKIAN+FEGC F+AN+RE SKQ+ GL+ LQE L+
Sbjct: 213 MSDGITMFGLYGIGGMGKTTLAKALYNKIANKFEGCCFLANIRETSKQYEGLVRLQEKLI 272

Query: 61  SEILMCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQLTQYA 108
            EILM  FIK+ N +HR  NIIRDRL +K+I L+LDDID  +QL   A
Sbjct: 273 YEILMDGFIKVSN-IHRGINIIRDRLCAKKILLILDDIDTSEQLQALA 319

[Close]

BLAST of Chy5G101940 vs. NCBI nr
Match: XP_038876496.1 (disease resistance protein RPV1-like, partial [Benincasa hispida])

HSP 1 Score: 138 bits (347), Expect = 2.84e-35
Identity = 71/108 (65.74%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 1   MSDVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLL 60
           MSD +TM+G+YGIGG+GKTTLAKAL+N+IAN FEGC F+AN+REASKQ+ GL+ LQE LL
Sbjct: 53  MSDGITMVGLYGIGGMGKTTLAKALHNRIANDFEGCCFLANIREASKQYEGLVRLQEKLL 112

Query: 61  SEILMCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQLTQYA 108
            EILM D IK+ N VHR   ++RDRL SK+I L+LDDID  +QL   A
Sbjct: 113 YEILMDDSIKVNN-VHRGIIVLRDRLCSKKILLILDDIDTSEQLQVLA 159

[Close]

BLAST of Chy5G101940 vs. NCBI nr
Match: XP_008454602.1 (PREDICTED: LOW QUALITY PROTEIN: disease resistance protein RPP4-like [Cucumis melo])

HSP 1 Score: 134 bits (338), Expect = 6.12e-34
Identity = 71/100 (71.00%), Postives = 85/100 (85.00%), Query Frame = 0


Query: 5   VTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLLSEIL 64
           V M+G+YGIGGIGKTTLAKALYNKIA+QFEGC F++NVREASK+FNGL  LQE LL EIL
Sbjct: 227 VYMVGIYGIGGIGKTTLAKALYNKIASQFEGCCFLSNVREASKRFNGLAQLQESLLYEIL 286

Query: 65  MCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQL 104
           M D +K+ NL  R  NIIR+RLHSK++F+VLDD+D  +QL
Sbjct: 287 MDD-LKVVNL-DRGINIIRNRLHSKKVFIVLDDVDKLEQL 324

[Close]

BLAST of Chy5G101940 vs. NCBI nr
Match: XP_038889774.1 (disease resistance protein RPV1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 134 bits (337), Expect = 8.37e-34
Identity = 69/108 (63.89%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 1   MSDVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLL 60
           M D +TM+G+YGIGG+GKTTLAKALYN+IA+ FEG  F+AN+REAS Q+ GL+ LQE LL
Sbjct: 204 MFDGITMVGLYGIGGMGKTTLAKALYNRIADNFEGWCFLANIREASNQYGGLVQLQEKLL 263

Query: 61  SEILMCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQLTQYA 108
            E+LM D IK+ N +HR  NIIRDRL SK+I +VLDDID  +QL   A
Sbjct: 264 CEVLMDDLIKVSN-IHRGINIIRDRLCSKKILVVLDDIDTIEQLRVLA 310

[Close]

BLAST of Chy5G101940 vs. NCBI nr
Match: XP_038889763.1 (disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889764.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889765.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889766.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889768.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889769.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889770.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889771.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889772.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889773.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 134 bits (337), Expect = 8.40e-34
Identity = 69/108 (63.89%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 1   MSDVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLL 60
           M D +TM+G+YGIGG+GKTTLAKALYN+IA+ FEG  F+AN+REAS Q+ GL+ LQE LL
Sbjct: 204 MFDGITMVGLYGIGGMGKTTLAKALYNRIADNFEGWCFLANIREASNQYGGLVQLQEKLL 263

Query: 61  SEILMCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQLTQYA 108
            E+LM D IK+ N +HR  NIIRDRL SK+I +VLDDID  +QL   A
Sbjct: 264 CEVLMDDLIKVSN-IHRGINIIRDRLCSKKILVVLDDIDTIEQLRVLA 310

[Close]

BLAST of Chy5G101940 vs. TAIR 10
Match: AT5G36930.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 92.4 bits (228), Expect = 2.4e-19
Identity = 50/107 (46.73%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 2   SDVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLLS 61
           SD V ++ +YG+GGIGKTTLAK  +N+ ++ FEG SF+ N RE SK+  G  +LQ  LLS
Sbjct: 206 SDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFREYSKKPEGRTHLQHQLLS 265

Query: 62  EILMCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQLTQYA 109
           +IL  + I+   L H     +++R  SKR+ LV+DD+DD  QL   A
Sbjct: 266 DILRRNDIEFKGLDH----AVKERFRSKRVLLVVDDVDDVHQLNSAA 308

[Close]

BLAST of Chy5G101940 vs. TAIR 10
Match: AT5G36930.2 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 92.4 bits (228), Expect = 2.4e-19
Identity = 50/107 (46.73%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 2   SDVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLLS 61
           SD V ++ +YG+GGIGKTTLAK  +N+ ++ FEG SF+ N RE SK+  G  +LQ  LLS
Sbjct: 209 SDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFREYSKKPEGRTHLQHQLLS 268

Query: 62  EILMCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQLTQYA 109
           +IL  + I+   L H     +++R  SKR+ LV+DD+DD  QL   A
Sbjct: 269 DILRRNDIEFKGLDH----AVKERFRSKRVLLVVDDVDDVHQLNSAA 311

[Close]

BLAST of Chy5G101940 vs. TAIR 10
Match: AT1G27170.1 (transmembrane receptors;ATP binding )

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-16
Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 2   SDVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLLS 61
           S  V +LG+YG+GGIGKTTLAKA YNKI   FE  +F++++RE S   NGL+ LQ+ L+ 
Sbjct: 208 SSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAFISDIRERSSAENGLVTLQKTLIK 267

Query: 62  EILM----CDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQL 105
           E+       + + IG         I+  +H K+I +VLDD+D   Q+
Sbjct: 268 ELFRLVPEIEDVSIG------LEKIKANVHEKKIIVVLDDVDHIDQV 308

[Close]

BLAST of Chy5G101940 vs. TAIR 10
Match: AT1G27170.2 (transmembrane receptors;ATP binding )

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-16
Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 2   SDVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASKQFNGLLNLQEMLLS 61
           S  V +LG+YG+GGIGKTTLAKA YNKI   FE  +F++++RE S   NGL+ LQ+ L+ 
Sbjct: 208 SSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAFISDIRERSSAENGLVTLQKTLIK 267

Query: 62  EILM----CDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQL 105
           E+       + + IG         I+  +H K+I +VLDD+D   Q+
Sbjct: 268 ELFRLVPEIEDVSIG------LEKIKANVHEKKIIVVLDDVDHIDQV 308

[Close]

BLAST of Chy5G101940 vs. TAIR 10
Match: AT5G41540.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 77.8 bits (190), Expect = 6.0e-15
Identity = 44/112 (39.29%), Postives = 70/112 (62.50%), Query Frame = 0


Query: 2   SDVVTMLGVYGIGGIGKTTLAKALYNKIANQFEGCSFVANVREASK-----QFNGLLNLQ 61
           SD V M+G++G  GIGKTT+A+ALYN+++  F+   F+ N++ + K      ++  LNLQ
Sbjct: 202 SDEVKMIGIWGPAGIGKTTIARALYNQLSTNFQFKCFMGNLKGSYKSIGVDNYDWKLNLQ 261

Query: 62  EMLLSEILMCDFIKIGNLVHRNTNIIRDRLHSKRIFLVLDDIDDYKQLTQYA 109
             LLS+IL  + +K  +L       I+D L  K++ +V+DD+DD +QL   A
Sbjct: 262 NQLLSKILNQNDVKTDHL-----GGIKDWLEDKKVLIVIDDVDDLEQLLALA 308

The following BLAST results are available for this feature:

BLAST of Chy5G101940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
V9M2S5	2.8e-17	47.12	Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=...	[more]
V9M398	4.8e-17	46.67	Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=...	[more]
Q40253	3.1e-16	46.00	Disease resistance protein L6 OS=Linum usitatissimum OX=4006 GN=L6 PE=1 SV=1	[more]
Q9SZ66	9.4e-13	42.16	Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=...	[more]
A0A290U7C4	1.0e-11	39.00	Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV...	[more]

BLAST of Chy5G101940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZ02	9.7e-29	71.00	LOW QUALITY PROTEIN: disease resistance protein RPP4-like OS=Cucumis melo OX=365...	[more]
D9I8I6	1.4e-27	62.96	TIR-CC-NBS-AAA+ATPase class resistance protein OS=Cucumis sativus OX=3659 PE=4 S...	[more]
A0A0A0LLK3	1.4e-27	69.61	TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G020890 PE=4 SV...	[more]
A0A5D3D443	1.8e-27	69.00	TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TWK7	1.8e-27	69.00	TIR-NBS-LRR disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Chy5G101940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889350.1	8.85e-37	66.67	disease resistance protein RPV1-like [Benincasa hispida]	[more]
XP_038876496.1	2.84e-35	65.74	disease resistance protein RPV1-like, partial [Benincasa hispida]	[more]
XP_008454602.1	6.12e-34	71.00	PREDICTED: LOW QUALITY PROTEIN: disease resistance protein RPP4-like [Cucumis me...	[more]
XP_038889774.1	8.37e-34	63.89	disease resistance protein RPV1-like isoform X2 [Benincasa hispida]	[more]
XP_038889763.1	8.40e-34	63.89	disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_03888976...	[more]

BLAST of Chy5G101940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36930.1	2.4e-19	46.73	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT5G36930.2	2.4e-19	46.73	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G27170.1	1.4e-16	42.99	transmembrane receptors;ATP binding	[more]
AT1G27170.2	1.4e-16	42.99	transmembrane receptors;ATP binding	[more]
AT5G41540.1	6.0e-15	39.29	Disease resistance protein (TIR-NBS-LRR class) family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00364	DISEASERSIST	coord: 7..22 score: 59.22 coord: 85..99 score: 46.0
None	No IPR available	PANTHER	PTHR11017:SF422	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	coord: 4..104
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..108 e-value: 1.0E-22 score: 82.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..106
IPR002182	NB-ARC	PFAM	PF00931	NB-ARC	coord: 6..104 e-value: 5.1E-11 score: 42.2
IPR044974	Disease resistance protein, plants	PANTHER	PTHR11017	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	coord: 4..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G101940.1	Chy5G101940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0007165	signal transduction
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0003953	NAD+ nucleosidase activity