Chy5G100880 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G100880
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH05: 15012644 .. 15014479 (-)
RNA-Seq Expression	Chy5G100880
Synteny	Chy5G100880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGTCATCATTCGCCACTCCTCGGCGTCGAGAATTTTCCCGGCGAAAATTGATCGGAACTGCATTTTCTCGACGAACCATCTTCCGTTCTGCACTTACAATTCAACCTGTACGGCTCCCAAATCGAACGATTTCGACCCACTAATCATCTCAGACCTTATTTCCAGGCAACAATGGTCAATCCTCAAATCCCATGTCAAATTCAAAAGTCCCATCGATTTTCTTCACCAATTGATGGGTTCGGGAGACGTTGACCCATTACTTGTTCTCAGGTACTTCAATTGGTCCCGGAGAGAGCTTAATGTTAATTACAGCATTGAAGTCTTCTGCAGACTCTTAAATTTATTGGCCAACGCTAAATATTACCCCAAAATTCGATCAATTCTCGATTCTTTTGTAAAGGGTGAAACAAACTGCTCGATTTCTTTGATTTTTCACTCGCTTTCGGTGTGTAGTGGTCAATTTTGTGCTAATTCGATAATCGCTGATATGTTGGTGTTAGCCTATGTGAAAAATTCGAAAACAGTTTTGGGATTGGAGGCGTTTAAGAGAGCTGGTGATTATAGGTATAAGTTATCTGTGTTATCTTGTAACCCATTGTTGAGTGCCTTGGTGAAGGAGAATGAATTTGGGGGTGTGGAATTTGTGTATAAAGAGATGATTAGAAGGAAAATTAGTCCTAATTTGATTACATTTAATATTGTGATTAATGGGTTATGTAAGGTTGGGAAATTGAATAAAGCTGGAGATGTTATTGATGATATGAAAGTATGGGGATTCTGGCCCAATGTGGTTACCTATAACACTCTCATTGATGGATACTGTAAAATGGGTAGGGTTGGGAAGATGTATAAAGCTGATGCTATTTTGAAGGAAATGGTGGCAAATAAAGTTAGCCCAAATAATGTAACATTTAACGTATTGATTGATGGGTTTTGTAAAGATGAAAACTTATCTGCTGCGTTGAAGGTGTTTGAGGAAATGCAGAGTCAGGGTCTGAAGCCTACTGTAGTAACATACAATTCGTTAGTAAATGGTTTGTGTAATGAAGGAAAACTGAATGAGGCTAAAGTTCTTCTTGATGAAATGTTGAGTTCAAACTTGAAGCCTAATGTTATTACTTATAATGCTCTGATTAATGGGTATTGTAAGAAGAAGTTGGTGGAGGAAGCTAGGGAGTTGTTTGATAATATTGGAAAACAAGGGCTGACTCCCAATGTTATAACATTCAATACATTACTTGATGGATATTGCAAGTTTGGGAAGATGGAAGAGGCATTTTCGCTCCAGAAGGTAATGTTAGAGAAAGGGTTTCTCCCAAATGTCTCAACCTACAATTGCCTTATCGTTGGTTTTTGTCGGGAGGGAAAAATGGAGGAAGTCAAGAATCTTTTAAATGAAATGGAATGTAGAGGTGCGAAAGCTGATACAGTGACGTATAATATTTTGATAAGTGCATGGTGTGAGAAAAGGGAGCCAAAAAAGGCAGCACGACTTATTGATGAGATGCTCGACAAGGGATTAAAACCAAGTCATTTGACATATAACATTTTGTTGAATGGCTATTGCATGGAAGGAAACTTAAGGGCTGCTTTGAATTTGAGGAAGCAAATGGAGAAAGAAGGAAGATGGGCAAATGTGGTAACGTATAATGTGTTGATTCAAGGTTATTGTAGAAAGGGGAAATTGGAAGATGCAAATGGACTTCTTAATGAGATGCTGGAGAAGGGGTTAATACCGAATCGAACTACTTATGAGATAATTAAAGAGGAAATGATGGAGAAAGGATTTCTTCCCGATATAGAAGGTCATCTTTATCACGCCTCCCAGTAG

mRNA sequence

ATGAACGTCATCATTCGCCACTCCTCGGCGTCGAGAATTTTCCCGGCGAAAATTGATCGGAACTGCATTTTCTCGACGAACCATCTTCCGTTCTGCACTTACAATTCAACCTGTACGGCTCCCAAATCGAACGATTTCGACCCACTAATCATCTCAGACCTTATTTCCAGGCAACAATGGTCAATCCTCAAATCCCATGTCAAATTCAAAAGTCCCATCGATTTTCTTCACCAATTGATGGGTTCGGGAGACGTTGACCCATTACTTGTTCTCAGGTACTTCAATTGGTCCCGGAGAGAGCTTAATGTTAATTACAGCATTGAAGTCTTCTGCAGACTCTTAAATTTATTGGCCAACGCTAAATATTACCCCAAAATTCGATCAATTCTCGATTCTTTTGTAAAGGGTGAAACAAACTGCTCGATTTCTTTGATTTTTCACTCGCTTTCGGTGTGTAGTGGTCAATTTTGTGCTAATTCGATAATCGCTGATATGTTGGTGTTAGCCTATGTGAAAAATTCGAAAACAGTTTTGGGATTGGAGGCGTTTAAGAGAGCTGGTGATTATAGGTATAAGTTATCTGTGTTATCTTGTAACCCATTGTTGAGTGCCTTGGTGAAGGAGAATGAATTTGGGGGTGTGGAATTTGTGTATAAAGAGATGATTAGAAGGAAAATTAGTCCTAATTTGATTACATTTAATATTGTGATTAATGGGTTATGTAAGGTTGGGAAATTGAATAAAGCTGGAGATGTTATTGATGATATGAAAGTATGGGGATTCTGGCCCAATGTGGTTACCTATAACACTCTCATTGATGGATACTGTAAAATGGGTAGGGTTGGGAAGATGTATAAAGCTGATGCTATTTTGAAGGAAATGGTGGCAAATAAAGTTAGCCCAAATAATGTAACATTTAACGTATTGATTGATGGGTTTTGTAAAGATGAAAACTTATCTGCTGCGTTGAAGGTGTTTGAGGAAATGCAGAGTCAGGGTCTGAAGCCTACTGTAGTAACATACAATTCGTTAGTAAATGGTTTGTGTAATGAAGGAAAACTGAATGAGGCTAAAGTTCTTCTTGATGAAATGTTGAGTTCAAACTTGAAGCCTAATGTTATTACTTATAATGCTCTGATTAATGGGTATTGTAAGAAGAAGTTGGTGGAGGAAGCTAGGGAGTTGTTTGATAATATTGGAAAACAAGGGCTGACTCCCAATGTTATAACATTCAATACATTACTTGATGGATATTGCAAGTTTGGGAAGATGGAAGAGGCATTTTCGCTCCAGAAGGTAATGTTAGAGAAAGGGTTTCTCCCAAATGTCTCAACCTACAATTGCCTTATCGTTGGTTTTTGTCGGGAGGGAAAAATGGAGGAAGTCAAGAATCTTTTAAATGAAATGGAATGTAGAGGTGCGAAAGCTGATACAGTGACGTATAATATTTTGATAAGTGCATGGTGTGAGAAAAGGGAGCCAAAAAAGGCAGCACGACTTATTGATGAGATGCTCGACAAGGGATTAAAACCAAGTCATTTGACATATAACATTTTGTTGAATGGCTATTGCATGGAAGGAAACTTAAGGGCTGCTTTGAATTTGAGGAAGCAAATGGAGAAAGAAGGAAGATGGGCAAATGTGGTAACGTATAATGTGTTGATTCAAGGTTATTGTAGAAAGGGGAAATTGGAAGATGCAAATGGACTTCTTAATGAGATGCTGGAGAAGGGGTTAATACCGAATCGAACTACTTATGAGATAATTAAAGAGGAAATGATGGAGAAAGGATTTCTTCCCGATATAGAAGGTCATCTTTATCACGCCTCCCAGTAG

Coding sequence (CDS)

ATGAACGTCATCATTCGCCACTCCTCGGCGTCGAGAATTTTCCCGGCGAAAATTGATCGGAACTGCATTTTCTCGACGAACCATCTTCCGTTCTGCACTTACAATTCAACCTGTACGGCTCCCAAATCGAACGATTTCGACCCACTAATCATCTCAGACCTTATTTCCAGGCAACAATGGTCAATCCTCAAATCCCATGTCAAATTCAAAAGTCCCATCGATTTTCTTCACCAATTGATGGGTTCGGGAGACGTTGACCCATTACTTGTTCTCAGGTACTTCAATTGGTCCCGGAGAGAGCTTAATGTTAATTACAGCATTGAAGTCTTCTGCAGACTCTTAAATTTATTGGCCAACGCTAAATATTACCCCAAAATTCGATCAATTCTCGATTCTTTTGTAAAGGGTGAAACAAACTGCTCGATTTCTTTGATTTTTCACTCGCTTTCGGTGTGTAGTGGTCAATTTTGTGCTAATTCGATAATCGCTGATATGTTGGTGTTAGCCTATGTGAAAAATTCGAAAACAGTTTTGGGATTGGAGGCGTTTAAGAGAGCTGGTGATTATAGGTATAAGTTATCTGTGTTATCTTGTAACCCATTGTTGAGTGCCTTGGTGAAGGAGAATGAATTTGGGGGTGTGGAATTTGTGTATAAAGAGATGATTAGAAGGAAAATTAGTCCTAATTTGATTACATTTAATATTGTGATTAATGGGTTATGTAAGGTTGGGAAATTGAATAAAGCTGGAGATGTTATTGATGATATGAAAGTATGGGGATTCTGGCCCAATGTGGTTACCTATAACACTCTCATTGATGGATACTGTAAAATGGGTAGGGTTGGGAAGATGTATAAAGCTGATGCTATTTTGAAGGAAATGGTGGCAAATAAAGTTAGCCCAAATAATGTAACATTTAACGTATTGATTGATGGGTTTTGTAAAGATGAAAACTTATCTGCTGCGTTGAAGGTGTTTGAGGAAATGCAGAGTCAGGGTCTGAAGCCTACTGTAGTAACATACAATTCGTTAGTAAATGGTTTGTGTAATGAAGGAAAACTGAATGAGGCTAAAGTTCTTCTTGATGAAATGTTGAGTTCAAACTTGAAGCCTAATGTTATTACTTATAATGCTCTGATTAATGGGTATTGTAAGAAGAAGTTGGTGGAGGAAGCTAGGGAGTTGTTTGATAATATTGGAAAACAAGGGCTGACTCCCAATGTTATAACATTCAATACATTACTTGATGGATATTGCAAGTTTGGGAAGATGGAAGAGGCATTTTCGCTCCAGAAGGTAATGTTAGAGAAAGGGTTTCTCCCAAATGTCTCAACCTACAATTGCCTTATCGTTGGTTTTTGTCGGGAGGGAAAAATGGAGGAAGTCAAGAATCTTTTAAATGAAATGGAATGTAGAGGTGCGAAAGCTGATACAGTGACGTATAATATTTTGATAAGTGCATGGTGTGAGAAAAGGGAGCCAAAAAAGGCAGCACGACTTATTGATGAGATGCTCGACAAGGGATTAAAACCAAGTCATTTGACATATAACATTTTGTTGAATGGCTATTGCATGGAAGGAAACTTAAGGGCTGCTTTGAATTTGAGGAAGCAAATGGAGAAAGAAGGAAGATGGGCAAATGTGGTAACGTATAATGTGTTGATTCAAGGTTATTGTAGAAAGGGGAAATTGGAAGATGCAAATGGACTTCTTAATGAGATGCTGGAGAAGGGGTTAATACCGAATCGAACTACTTATGAGATAATTAAAGAGGAAATGATGGAGAAAGGATTTCTTCCCGATATAGAAGGTCATCTTTATCACGCCTCCCAGTAG

Protein sequence

MNVIIRHSSASRIFPAKIDRNCIFSTNHLPFCTYNSTCTAPKSNDFDPLIISDLISRQQWSILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANAKYYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVSPNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLTPNVITFNTLLDGYCKFGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNLLNEMECRGAKADTVTYNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYHASQ*

Homology

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BLAST of Chy5G100880 vs. ExPASy Swiss-Prot
Match: O04504 (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX=3702 GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 8.0e-194
Identity = 329/581 (56.63%), Postives = 435/581 (74.87%), Query Frame = 0


Query: 32  CTYNSTCT-APKSNDFDPLIISDLISRQQWSILKSHVKFKSPIDFLHQLMGSGDVDPLLV 91
           C+ +ST T +P    +D  +I+DLI +Q WS L  HV   +P +   QL+ S ++DP L 
Sbjct: 26  CSSSSTITGSPCPPRYDVAVIADLIEKQHWSKLGVHVTDINPNELFRQLI-SSELDPDLC 85

Query: 92  LRYFNWSRRELNVNYSIEVFCRLLNLLANAKYYPKIRSILDSFVKGETNCSISLIFHSLS 151
           LRY++W  +  +++ S+E+  +LL+ LANAK Y KIRS LD FV+  ++  +  IFH++S
Sbjct: 86  LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS 145

Query: 152 VCSGQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENE 211
           +C    C NSIIADMLVLAY  NS+  LG EAFKR+G Y YKLS LSC PL+ AL+KEN 
Sbjct: 146 MCD-NVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR 205

Query: 212 FGGVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPNVVTYNT 271
              VE+VYKEMIRRKI PN+ TFN+VIN LCK GK+NKA DV++DMKV+G  PNVV+YNT
Sbjct: 206 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 265

Query: 272 LIDGYCKMGRVGKMYKADAILKEMVANKVSPNNVTFNVLIDGFCKDENLSAALKVFEEMQ 331
           LIDGYCK+G  GKMYKADA+LKEMV N VSPN  TFN+LIDGF KD+NL  ++KVF+EM 
Sbjct: 266 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 325

Query: 332 SQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLVE 391
            Q +KP V++YNSL+NGLCN GK++EA  + D+M+S+ ++PN+ITYNALING+CK  +++
Sbjct: 326 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 385

Query: 392 EARELFDNIGKQGLTPNVITFNTLLDGYCKFGKMEEAFSLQKVMLEKGFLPNVSTYNCLI 451
           EA ++F ++  QG  P    +N L+D YCK GK+++ F+L++ M  +G +P+V TYNCLI
Sbjct: 386 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 445

Query: 452 VGFCREGKMEEVKNLLNEMECRGAKADTVTYNILISAWCEKREPKKAARLIDEMLDKGLK 511
            G CR G +E  K L +++  +G   D VT++IL+  +C K E +KAA L+ EM   GLK
Sbjct: 446 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 505

Query: 512 PSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRW-ANVVTYNVLIQGYCRKGKLEDANG 571
           P HLTYNI++ GYC EGNL+AA N+R QMEKE R   NV +YNVL+QGY +KGKLEDAN 
Sbjct: 506 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 565

Query: 572 LLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYHAS 611
           LLNEMLEKGL+PNR TYEI+KEEM+++GF+PDIEGHL++ S
Sbjct: 566 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVS 603

[Close]

BLAST of Chy5G100880 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 4.8e-90
Identity = 188/541 (34.75%), Postives = 292/541 (53.97%), Query Frame = 0


Query: 86  DPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANAKYYPKIRSILDSFVKGET--NCSIS 145
           D  L+L++ NW+    +  +++   C  L++L   K Y K   IL   V  +T  +   S
Sbjct: 61  DQALILKFLNWANP--HQFFTLRCKCITLHILTKFKLY-KTAQILAEDVAAKTLDDEYAS 120

Query: 146 LIFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYRYKLSVLSCNPLLS 205
           L+F SL        + S + D++V +Y + S     L     A  + +   VLS N +L 
Sbjct: 121 LVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLD 180

Query: 206 ALVK-ENEFGGVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFW 265
           A ++ +      E V+KEM+  ++SPN+ T+NI+I G C  G ++ A  + D M+  G  
Sbjct: 181 ATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL 240

Query: 266 PNVVTYNTLIDGYCKMGRV--------------------------------GKMYKADAI 325
           PNVVTYNTLIDGYCK+ ++                                G+M +   +
Sbjct: 241 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 300

Query: 326 LKEMVANKVSPNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCN 385
           L EM     S + VT+N LI G+CK+ N   AL +  EM   GL P+V+TY SL++ +C 
Sbjct: 301 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 360

Query: 386 EGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLTPNVIT 445
            G +N A   LD+M    L PN  TY  L++G+ +K  + EA  +   +   G +P+V+T
Sbjct: 361 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 420

Query: 446 FNTLLDGYCKFGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNLLNEME 505
           +N L++G+C  GKME+A ++ + M EKG  P+V +Y+ ++ GFCR   ++E   +  EM 
Sbjct: 421 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 480

Query: 506 CRGAKADTVTYNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLR 565
            +G K DT+TY+ LI  +CE+R  K+A  L +EML  GL P   TY  L+N YCMEG+L 
Sbjct: 481 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 540

Query: 566 AALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK 592
            AL L  +M ++G   +VVTY+VLI G  ++ +  +A  LL ++  +  +P+  TY  + 
Sbjct: 541 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 598

[Close]

BLAST of Chy5G100880 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.5e-83
Identity = 183/602 (30.40%), Postives = 317/602 (52.66%), Query Frame = 0


Query: 26  TNHLPFCTYNSTCTAPKSNDFDPLIISDLISRQQWSILKS----HVKFKSPIDFLHQLMG 85
           T+  PF  Y+    + +  +F   I + +  R+   + +S      KFK+  D L  ++ 
Sbjct: 38  TDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKT--DHLIWVLM 97

Query: 86  SGDVDPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANAKYYPKIRSILDSF-VKGETNC 145
               D  LVL +F+W+R   + N  +E  C +++L   +K     +S++ SF  + + N 
Sbjct: 98  KIKCDYRLVLDFFDWARSRRDSN--LESLCIVIHLAVASKDLKVAQSLISSFWERPKLNV 157

Query: 146 SISLI--FHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYRYKLSVLSC 205
           + S +  F  L      + ++  + D+     V           F++  +Y   LSV SC
Sbjct: 158 TDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSC 217

Query: 206 NPLLSALVKE-NEFGGVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMK 265
           N  L+ L K+  +      V++E     +  N+ ++NIVI+ +C++G++ +A  ++  M+
Sbjct: 218 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 277

Query: 266 VWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILK------------------------- 325
           + G+ P+V++Y+T+++GYC+ G + K++K   ++K                         
Sbjct: 278 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 337

Query: 326 -------EMVANKVSPNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 385
                  EM+   + P+ V +  LIDGFCK  ++ AA K F EM S+ + P V+TY +++
Sbjct: 338 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 397

Query: 386 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLT 445
           +G C  G + EA  L  EM    L+P+ +T+  LINGYCK   +++A  + +++ + G +
Sbjct: 398 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 457

Query: 446 PNVITFNTLLDGYCKFGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNL 505
           PNV+T+ TL+DG CK G ++ A  L   M + G  PN+ TYN ++ G C+ G +EE   L
Sbjct: 458 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 517

Query: 506 LNEMECRGAKADTVTYNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCM 565
           + E E  G  ADTVTY  L+ A+C+  E  KA  ++ EML KGL+P+ +T+N+L+NG+C+
Sbjct: 518 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 577

Query: 566 EGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTT 588
            G L     L   M  +G   N  T+N L++ YC +  L+ A  +  +M  +G+ P+  T
Sbjct: 578 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 635

[Close]

BLAST of Chy5G100880 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 296.2 bits (757), Expect = 8.5e-79
Identity = 162/505 (32.08%), Postives = 272/505 (53.86%), Query Frame = 0


Query: 89  LVLRYFNWSRRE--LNVNYSIEVFCRLLNLLANAKYYPKIRSILD--SFVKGETNCSISL 148
           L L++  W  ++  L  ++ +++ C   ++L  A+ Y   R IL   S + G+++     
Sbjct: 52  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGA 111

Query: 149 IFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSA 208
           +  +  +C+    +N  + D+L+  Y++       LE F+  G Y +  SV +CN +L +
Sbjct: 112 LMTTYRLCN----SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 171

Query: 209 LVKENEFGGVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPN 268
           +VK  E   V    KEM++RKI P++ TFNI+IN LC  G   K+  ++  M+  G+ P 
Sbjct: 172 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 231

Query: 269 VVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVSPNNVTFNVLIDGFCKDENLSAALK 328
           +VTYNT++  YCK GR      A  +L  M +  V  +  T+N+LI   C+   ++    
Sbjct: 232 IVTYNTVLHWYCKKGR---FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 291

Query: 329 VFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYC 388
           +  +M+ + + P  VTYN+L+NG  NEGK+  A  LL+EMLS  L PN +T+NALI+G+ 
Sbjct: 292 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 351

Query: 389 KKKLVEEARELFDNIGKQGLTPNVITFNTLLDGYCKFGKMEEAFSLQKVMLEKGFLPNVS 448
            +   +EA ++F  +  +GLTP+ +++  LLDG CK  + + A      M   G      
Sbjct: 352 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 411

Query: 449 TYNCLIVGFCREGKMEEVKNLLNEMECRGAKADTVTYNILISAWCEKREPKKAARLIDEM 508
           TY  +I G C+ G ++E   LLNEM   G   D VTY+ LI+ +C+    K A  ++  +
Sbjct: 412 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 471

Query: 509 LDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKL 568
              GL P+ + Y+ L+   C  G L+ A+ + + M  EG   +  T+NVL+   C+ GK+
Sbjct: 472 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 531

Query: 569 EDANGLLNEMLEKGLIPNRTTYEII 590
            +A   +  M   G++PN  +++ +
Sbjct: 532 AEAEEFMRCMTSDGILPNTVSFDCL 549

[Close]

BLAST of Chy5G100880 vs. ExPASy Swiss-Prot
Match: Q9CAN0 (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.9e-78
Identity = 161/512 (31.45%), Postives = 277/512 (54.10%), Query Frame = 0


Query: 106 SIEVFCRLLNLLANAKYYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADM 165
           SI  F +LL+ +A    +  + S+ +       N  IS   ++ S+    FC        
Sbjct: 80  SIVEFSKLLSAIAKMNKFDLVISLGEQM----QNLGISHNLYTYSILINCFC-------- 139

Query: 166 LVLAYVKNSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRK 225
                 + S+  L L    +     Y+  +++ N LL+     N       +  +M+   
Sbjct: 140 ------RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 199

Query: 226 ISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285
             P+  TFN +I+GL +  + ++A  ++D M V G  P++VTY  +++G CK G +    
Sbjct: 200 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID--- 259

Query: 286 KADAILKEMVANKVSPNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
            A ++LK+M   K+ P  V +N +ID  C  +N++ AL +F EM ++G++P VVTYNSL+
Sbjct: 260 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 319

Query: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLT 405
             LCN G+ ++A  LL +M+   + PNV+T++ALI+ + K+  + EA +L+D + K+ + 
Sbjct: 320 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 379

Query: 406 PNVITFNTLLDGYCKFGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNL 465
           P++ T+++L++G+C   +++EA  + ++M+ K   PNV TYN LI GFC+  +++E   L
Sbjct: 380 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 439

Query: 466 LNEMECRGAKADTVTYNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCM 525
             EM  RG   +TVTY  LI  + + RE   A  +  +M+  G+ P  +TY+ILL+G C 
Sbjct: 440 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 499

Query: 526 EGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTT 585
            G +  AL + + +++     ++ TYN++I+G C+ GK+ED   L   +  KG+ PN  T
Sbjct: 500 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 559

Query: 586 Y----------------EIIKEEMMEKGFLPD 602
           Y                + +  EM E+G LPD
Sbjct: 560 YTTMMSGFCRKGLKEEADALFREMKEEGPLPD 570

[Close]

BLAST of Chy5G100880 vs. ExPASy TrEMBL
Match: A0A5D3BCX2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001150 PE=4 SV=1)

HSP 1 Score: 1165.2 bits (3013), Expect = 0.0e+00
Identity = 572/610 (93.77%), Postives = 585/610 (95.90%), Query Frame = 0


Query: 1   MNVIIRHSSASRIFPAKIDRNCIFSTNHLPFCTYNSTCTAPKSNDFDPLIISDLISRQQW 60
           MNVIIR SSASRIFP KIDRN IFST HLPFCTYNSTCTAP SNDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLPFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 61  SILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANA 120
           SILKSHVKFKSPIDFLHQLM SG VDPLLVLRYFNWSRREL VNYSIE+ CRLL+LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 121 KYYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGL 180
           KYYPKIRS+LDSFVKGETNCSISLIFHSLSVCS QFCANSIIADMLVLAYV+NSKTVLGL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDYRYKLSVLSCNPLLSALVKE+E G VEFVYKEMIRRKISPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEVGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDVIDDMKVWGFWPN VTYNTLIDGYCKMGRVGKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 301 PNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL 360
           PN VTFNVLIDGFCKDEN+S ALKVFEEMQSQGLKPTVVTYNSL+NG+CNEGKLNEAKVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 361 LDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420
           LDEMLSSNLKPNVITYNALINGYCKKK +EEARELFDNIGKQGLTPNVITFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 421 FGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNLLNEMECRGAKADTVT 480
            GKMEEAF LQKVMLEKGFLP+VSTYNCLIVGFCREGKMEEVKNLLNEMECRG KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 481 YNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540
           YNILISAWCEK+EPKKAARLIDEMLD+GLKPSHLTYNILLNGYCMEGNLRAALNLRKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KE  WANVVTYNVLI GYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 601 DIEGHLYHAS 611
           DIEGHLYHAS
Sbjct: 601 DIEGHLYHAS 610

[Close]

BLAST of Chy5G100880 vs. ExPASy TrEMBL
Match: A0A5A7U323 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001350 PE=4 SV=1)

HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 572/610 (93.77%), Postives = 585/610 (95.90%), Query Frame = 0


Query: 1   MNVIIRHSSASRIFPAKIDRNCIFSTNHLPFCTYNSTCTAPKSNDFDPLIISDLISRQQW 60
           MNVIIR SSASRIFP KIDRN IFST HL FCTYNSTCTAP SNDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLSFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 61  SILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANA 120
           SILKSHVKFKSPIDFLHQLM SG VDPLLVLRYFNWSRREL VNYSIE+ CRLL+LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 121 KYYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGL 180
           KYYPKIRS+LDSFVKGETNCSISLIFHSLSVCS QFCANSIIADMLVLAYV+NSKTVLGL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDYRYKLSVLSCNPLLSALVKE+EFG VEFVYKEMIRRKISPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDVIDDMKVWGFWPN VTYNTLIDGYCKMGRVGKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 301 PNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL 360
           PN VTFNVLIDGFCKDEN+S ALKVFEEMQSQGLKPTVVTYNSL+NG+CNEGKLNEAKVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 361 LDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420
           LDEMLSSNLKPNVITYNALINGYCKKK +EEARELFDNIGKQGLTPNVITFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 421 FGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNLLNEMECRGAKADTVT 480
            GKMEEAF LQKVMLEKGFLP+VSTYNCLIVGFCREGKMEEVKNLLNEMECRG KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 481 YNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540
           YNILISAWCEK+EPKKAARLIDEMLD+GLKPSHLTYNILLNGYCMEGNLRAALNLRKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KE  WANVVTYNVLI GYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 601 DIEGHLYHAS 611
           DIEGHLYHAS
Sbjct: 601 DIEGHLYHAS 610

[Close]

BLAST of Chy5G100880 vs. ExPASy TrEMBL
Match: A0A1S3BXE0 (pentatricopeptide repeat-containing protein At1g09820 OS=Cucumis melo OX=3656 GN=LOC103494244 PE=4 SV=1)

HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 572/610 (93.77%), Postives = 585/610 (95.90%), Query Frame = 0


Query: 1   MNVIIRHSSASRIFPAKIDRNCIFSTNHLPFCTYNSTCTAPKSNDFDPLIISDLISRQQW 60
           MNVIIR SSASRIFP KIDRN IFST HL FCTYNSTCTAP SNDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLSFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 61  SILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANA 120
           SILKSHVKFKSPIDFLHQLM SG VDPLLVLRYFNWSRREL VNYSIE+ CRLL+LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 121 KYYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGL 180
           KYYPKIRS+LDSFVKGETNCSISLIFHSLSVCS QFCANSIIADMLVLAYV+NSKTVLGL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDYRYKLSVLSCNPLLSALVKE+EFG VEFVYKEMIRRKISPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDVIDDMKVWGFWPN VTYNTLIDGYCKMGRVGKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 301 PNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL 360
           PN VTFNVLIDGFCKDEN+S ALKVFEEMQSQGLKPTVVTYNSL+NG+CNEGKLNEAKVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 361 LDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420
           LDEMLSSNLKPNVITYNALINGYCKKK +EEARELFDNIGKQGLTPNVITFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 421 FGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNLLNEMECRGAKADTVT 480
            GKMEEAF LQKVMLEKGFLP+VSTYNCLIVGFCREGKMEEVKNLLNEMECRG KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 481 YNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540
           YNILISAWCEK+EPKKAARLIDEMLD+GLKPSHLTYNILLNGYCMEGNLRAALNLRKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KE  WANVVTYNVLI GYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 601 DIEGHLYHAS 611
           DIEGHLYHAS
Sbjct: 601 DIEGHLYHAS 610

[Close]

BLAST of Chy5G100880 vs. ExPASy TrEMBL
Match: A0A6J1DRY0 (pentatricopeptide repeat-containing protein At1g09820 OS=Momordica charantia OX=3673 GN=LOC111023289 PE=4 SV=1)

HSP 1 Score: 1088.6 bits (2814), Expect = 0.0e+00
Identity = 528/600 (88.00%), Postives = 561/600 (93.50%), Query Frame = 0


Query: 12  RIFPAKIDRNCIFSTNHLPFCTYNSTCTAPKSNDFDPLIISDLISRQQWSILKSHVKFKS 71
           RIFPAKIDR  IFST H P CTYNST TA  SNDFDP IIS+LISRQQWS LKSH KFKS
Sbjct: 10  RIFPAKIDRKYIFSTTHPPLCTYNSTSTASSSNDFDPQIISELISRQQWSNLKSHFKFKS 69

Query: 72  PIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANAKYYPKIRSILD 131
           PIDFLH L+GSG VDPLLVLRYFNWS++EL VNYSIE+FCRLLNLLANAK YPKIRS LD
Sbjct: 70  PIDFLHLLLGSGAVDPLLVLRYFNWSQKELKVNYSIELFCRLLNLLANAKCYPKIRSFLD 129

Query: 132 SFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYRY 191
           SFVKGETNC+ISLIF++LSVC  QFCANSIIADMLVLAYVKNSKT LGLEAFKR+GDY Y
Sbjct: 130 SFVKGETNCTISLIFYTLSVCGDQFCANSIIADMLVLAYVKNSKTSLGLEAFKRSGDYGY 189

Query: 192 KLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGD 251
           KLSVLSCNPLLSALVKE+EFG VEFVYKEMIRRK+SPNLITFNIVINGLCKVGKLNKAGD
Sbjct: 190 KLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKVSPNLITFNIVINGLCKVGKLNKAGD 249

Query: 252 VIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVSPNNVTFNVLID 311
           VIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVSPN+VTFN+LID
Sbjct: 250 VIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVSPNDVTFNILID 309

Query: 312 GFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP 371
           GFCKDEN+SAALKVFEEM+ QGLKP+VVTYNSL+NGLCNEGKLNEA  LLDEM +SNLKP
Sbjct: 310 GFCKDENISAALKVFEEMRIQGLKPSVVTYNSLINGLCNEGKLNEANTLLDEMSNSNLKP 369

Query: 372 NVITYNALINGYCKKKLVEEARELFDNIGKQGLTPNVITFNTLLDGYCKFGKMEEAFSLQ 431
           NV+TYNALINGYCKKKL+EEARELFDNIGKQGL PNVITFNTLLDGYCK GKM+EAF L+
Sbjct: 370 NVVTYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCKCGKMDEAFLLR 429

Query: 432 KVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNLLNEMECRGAKADTVTYNILISAWCEK 491
            +MLEKG  P+VSTYNCLIVGFC+EGKMEEV+NLLNEME RG KAD VTYNILISAWCEK
Sbjct: 430 SLMLEKGLPPDVSTYNCLIVGFCKEGKMEEVENLLNEMEERGLKADLVTYNILISAWCEK 489

Query: 492 REPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTY 551
           REPKKAA LIDEM  +GL+PSHLTYNILLNGYC+EGNLRAALN+RKQMEK+GRWANVVTY
Sbjct: 490 REPKKAAGLIDEMFHRGLRPSHLTYNILLNGYCIEGNLRAALNVRKQMEKDGRWANVVTY 549

Query: 552 NVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYHASQ 611
           NVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII+EEMMEKGFLPDIEGHLY  S+
Sbjct: 550 NVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIREEMMEKGFLPDIEGHLYQVSR 609

[Close]

BLAST of Chy5G100880 vs. ExPASy TrEMBL
Match: A0A6J1HPK5 (pentatricopeptide repeat-containing protein At1g09820 OS=Cucurbita maxima OX=3661 GN=LOC111465480 PE=4 SV=1)

HSP 1 Score: 1076.2 bits (2782), Expect = 0.0e+00
Identity = 519/611 (84.94%), Postives = 563/611 (92.14%), Query Frame = 0


Query: 1   MNVIIRHSSASRIFPAKIDRNCIFSTNHLPFCTYNSTCTAPKSNDFDPLIISDLISRQQW 60
           MN +IR     RIF AKI R   FST HLPFCTY+STCTAP SNDFDP IISDLISRQQW
Sbjct: 1   MNAMIRF--PPRIFTAKIGRRYKFSTMHLPFCTYHSTCTAPTSNDFDPQIISDLISRQQW 60

Query: 61  SILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANA 120
           S LKSH KFK+PIDFLH+L+GSG VDPLLVLRYF WS++EL VNY+IE+FCRLLNLLANA
Sbjct: 61  SNLKSHFKFKTPIDFLHELLGSGAVDPLLVLRYFKWSQKELRVNYNIELFCRLLNLLANA 120

Query: 121 KYYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGL 180
           KYYPKIRS LDSFVK ETNC+ISLIFH+LSVC  QFCANSIIADMLVLAYV+NSKT LGL
Sbjct: 121 KYYPKIRSFLDSFVKRETNCTISLIFHTLSVCGDQFCANSIIADMLVLAYVRNSKTALGL 180

Query: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDY YKLSVLSCNPLL+ALVKENEFGGVEFVYKEMIRRK SPNL TFNIVI+GL
Sbjct: 181 EAFKRAGDYGYKLSVLSCNPLLNALVKENEFGGVEFVYKEMIRRKFSPNLFTFNIVIHGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVS 300
           CK+G+LNKAGDVIDDMKVWGF PN VTYNTLIDGYCK+GRVGKM+KADAILKEMVAN VS
Sbjct: 241 CKIGRLNKAGDVIDDMKVWGFLPNEVTYNTLIDGYCKVGRVGKMFKADAILKEMVANNVS 300

Query: 301 PNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL 360
           PN+VTFN+LIDGFCKDEN+SAA+KVF+EMQSQG+KPTVVTYNSL+NGLCNEGKLNEA+VL
Sbjct: 301 PNDVTFNILIDGFCKDENISAAMKVFDEMQSQGVKPTVVTYNSLINGLCNEGKLNEARVL 360

Query: 361 LDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420
           LDEM S NLKPNV+TYNALINGYCKKKL+EEARELFD+IGKQGL PNVITFNTL+DGYCK
Sbjct: 361 LDEMSSLNLKPNVVTYNALINGYCKKKLLEEARELFDDIGKQGLDPNVITFNTLVDGYCK 420

Query: 421 FGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNLLNEMECRGAKADTVT 480
            GKM+EAF ++ +M E+GFLPNVSTYNCLI GFCR GKMEE KNLLNEME RG KAD +T
Sbjct: 421 CGKMDEAFLIRSLMFERGFLPNVSTYNCLITGFCRVGKMEEAKNLLNEMEGRGLKADMIT 480

Query: 481 YNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540
           YNILISAWCEKRE KKAARLIDEMLD+GL+PSHLT+NILLNGYC EGNLRAALN+RKQME
Sbjct: 481 YNILISAWCEKRESKKAARLIDEMLDRGLRPSHLTFNILLNGYCTEGNLRAALNVRKQME 540

Query: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KEGRWANVVTYNVLIQGYCRKGK+E ANGLLNEMLEKGLIPNRTTYEI++EEMMEKGFLP
Sbjct: 541 KEGRWANVVTYNVLIQGYCRKGKMEVANGLLNEMLEKGLIPNRTTYEIVREEMMEKGFLP 600

Query: 601 DIEGHLYHASQ 612
           DIEGHLY  S+
Sbjct: 601 DIEGHLYQVSR 609

[Close]

BLAST of Chy5G100880 vs. NCBI nr
Match: XP_004144813.1 (pentatricopeptide repeat-containing protein At1g09820 [Cucumis sativus] >XP_031736876.1 pentatricopeptide repeat-containing protein At1g09820 [Cucumis sativus] >KGN61033.2 hypothetical protein Csa_021337 [Cucumis sativus])

HSP 1 Score: 1211 bits (3134), Expect = 0.0
Identity = 593/611 (97.05%), Postives = 601/611 (98.36%), Query Frame = 0


Query: 1   MNVIIRHSSASRIFPAKIDRNCIFSTNHLPFCTYNSTCTAPKSNDFDPLIISDLISRQQW 60
           MNVIIRHSSASRIFPAKIDRNCIFST HLPFCTYN TCTAP SNDFDPLIISDLISRQQW
Sbjct: 1   MNVIIRHSSASRIFPAKIDRNCIFSTTHLPFCTYNPTCTAPISNDFDPLIISDLISRQQW 60

Query: 61  SILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANA 120
           SILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIE+ CRLLNLLANA
Sbjct: 61  SILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIELICRLLNLLANA 120

Query: 121 KYYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGL 180
           K+YPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYV+NSKTVLGL
Sbjct: 121 KHYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGL 180

Query: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFN VINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDV+DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVS 300

Query: 301 PNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL 360
           PN+VTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL
Sbjct: 301 PNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL 360

Query: 361 LDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420
           LDEMLSSNLKPNVITYNALINGYCKKKL+EEARELFDNIGKQGLTPNVITFNTLL GYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCK 420

Query: 421 FGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNLLNEMECRGAKADTVT 480
           FGKMEEAF LQKVMLEKGFLPN STYNCLIVGFCREGKMEEVKNLLNEM+CRG KADTVT
Sbjct: 421 FGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVT 480

Query: 481 YNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540
           YNILISAWCEK+EPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP
Sbjct: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600

Query: 601 DIEGHLYHASQ 611
           DIEGHLYHASQ
Sbjct: 601 DIEGHLYHASQ 611

[Close]

BLAST of Chy5G100880 vs. NCBI nr
Match: TYJ96471.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1161 bits (3003), Expect = 0.0
Identity = 572/610 (93.77%), Postives = 585/610 (95.90%), Query Frame = 0


Query: 1   MNVIIRHSSASRIFPAKIDRNCIFSTNHLPFCTYNSTCTAPKSNDFDPLIISDLISRQQW 60
           MNVIIR SSASRIFP KIDRN IFST HLPFCTYNSTCTAP SNDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLPFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 61  SILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANA 120
           SILKSHVKFKSPIDFLHQLM SG VDPLLVLRYFNWSRREL VNYSIE+ CRLL+LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 121 KYYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGL 180
           KYYPKIRS+LDSFVKGETNCSISLIFHSLSVCS QFCANSIIADMLVLAYV+NSKTVLGL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDYRYKLSVLSCNPLLSALVKE+E G VEFVYKEMIRRKISPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEVGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDVIDDMKVWGFWPN VTYNTLIDGYCKMGRVGKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 301 PNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL 360
           PN VTFNVLIDGFCKDEN+S ALKVFEEMQSQGLKPTVVTYNSL+NG+CNEGKLNEAKVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 361 LDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420
           LDEMLSSNLKPNVITYNALINGYCKKK +EEARELFDNIGKQGLTPNVITFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 421 FGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNLLNEMECRGAKADTVT 480
            GKMEEAF LQKVMLEKGFLP+VSTYNCLIVGFCREGKMEEVKNLLNEMECRG KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 481 YNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540
           YNILISAWCEK+EPKKAARLIDEMLD+GLKPSHLTYNILLNGYCMEGNLRAALNLRKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KE  WANVVTYNVLI GYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 601 DIEGHLYHAS 610
           DIEGHLYHAS
Sbjct: 601 DIEGHLYHAS 610

[Close]

BLAST of Chy5G100880 vs. NCBI nr
Match: XP_008453581.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09820 [Cucumis melo] >KAA0048065.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1160 bits (3002), Expect = 0.0
Identity = 572/610 (93.77%), Postives = 585/610 (95.90%), Query Frame = 0


Query: 1   MNVIIRHSSASRIFPAKIDRNCIFSTNHLPFCTYNSTCTAPKSNDFDPLIISDLISRQQW 60
           MNVIIR SSASRIFP KIDRN IFST HL FCTYNSTCTAP SNDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLSFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 61  SILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANA 120
           SILKSHVKFKSPIDFLHQLM SG VDPLLVLRYFNWSRREL VNYSIE+ CRLL+LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 121 KYYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGL 180
           KYYPKIRS+LDSFVKGETNCSISLIFHSLSVCS QFCANSIIADMLVLAYV+NSKTVLGL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDYRYKLSVLSCNPLLSALVKE+EFG VEFVYKEMIRRKISPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDVIDDMKVWGFWPN VTYNTLIDGYCKMGRVGKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 301 PNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL 360
           PN VTFNVLIDGFCKDEN+S ALKVFEEMQSQGLKPTVVTYNSL+NG+CNEGKLNEAKVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 361 LDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420
           LDEMLSSNLKPNVITYNALINGYCKKK +EEARELFDNIGKQGLTPNVITFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 421 FGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNLLNEMECRGAKADTVT 480
            GKMEEAF LQKVMLEKGFLP+VSTYNCLIVGFCREGKMEEVKNLLNEMECRG KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 481 YNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540
           YNILISAWCEK+EPKKAARLIDEMLD+GLKPSHLTYNILLNGYCMEGNLRAALNLRKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KE  WANVVTYNVLI GYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 601 DIEGHLYHAS 610
           DIEGHLYHAS
Sbjct: 601 DIEGHLYHAS 610

[Close]

BLAST of Chy5G100880 vs. NCBI nr
Match: XP_038891207.1 (pentatricopeptide repeat-containing protein At1g09820 [Benincasa hispida])

HSP 1 Score: 1125 bits (2910), Expect = 0.0
Identity = 549/611 (89.85%), Postives = 579/611 (94.76%), Query Frame = 0


Query: 1   MNVIIRHSSASRIFPAKIDRNCIFSTNHLPFCTYNSTCTAPKSNDFDPLIISDLISRQQW 60
           MNVIIR SS S IFP KI R  IFST +LPFCTYNSTCTAP SND DPLIISDLISRQQW
Sbjct: 1   MNVIIRISSTSTIFPVKIYRKFIFSTTYLPFCTYNSTCTAPTSNDSDPLIISDLISRQQW 60

Query: 61  SILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANA 120
           S LKSH KFKSP+DFLHQL+GSG VDPLLVLRYFNWS++EL VNY+IE+FCRL++LLANA
Sbjct: 61  STLKSHFKFKSPVDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELFCRLIHLLANA 120

Query: 121 KYYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGL 180
           K YPKIRS LDSFVKGETNCSISLIFH+LSVCS QFCANSIIAD+LVLAYVKNSKTVLGL
Sbjct: 121 KCYPKIRSFLDSFVKGETNCSISLIFHTLSVCSDQFCANSIIADILVLAYVKNSKTVLGL 180

Query: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNIVINGL 240
           EAFKRAGDY YKLSVLSCNPLLSALVKENEFG +EFVYKEMIRRK++PNLITFNIVINGL
Sbjct: 181 EAFKRAGDYGYKLSVLSCNPLLSALVKENEFGDMEFVYKEMIRRKVNPNLITFNIVINGL 240

Query: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVS 300
           CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMG+VGKMYKADAILKEMVANKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGKVGKMYKADAILKEMVANKVS 300

Query: 301 PNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL 360
           PN+VTFN LIDGFCKDEN+ AALKVFEEMQSQGLKPTVVTYNSL+NGLCNEGKLNEAKVL
Sbjct: 301 PNDVTFNTLIDGFCKDENVLAALKVFEEMQSQGLKPTVVTYNSLINGLCNEGKLNEAKVL 360

Query: 361 LDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420
           LD MLSSNLKPNVITYNALINGYCKKKL+EEARELFDNI KQGL PNVITFNTLLDGYCK
Sbjct: 361 LDGMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIRKQGLAPNVITFNTLLDGYCK 420

Query: 421 FGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNLLNEMECRGAKADTVT 480
            GKMEEAF LQ +MLEKGFLP++STYNCLIVGFCREGKMEEVK LLNEME RG KADTVT
Sbjct: 421 CGKMEEAFLLQNLMLEKGFLPDISTYNCLIVGFCREGKMEEVKKLLNEMERRGVKADTVT 480

Query: 481 YNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540
           YNILISAWCEKREPKKAARL+DEML++GL+PSHLT+NILLNGYCMEGNLRAALN+RKQME
Sbjct: 481 YNILISAWCEKREPKKAARLVDEMLERGLQPSHLTFNILLNGYCMEGNLRAALNVRKQME 540

Query: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600
           KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPN+TTYEIIKEEMMEKGFLP
Sbjct: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNQTTYEIIKEEMMEKGFLP 600

Query: 601 DIEGHLYHASQ 611
           DIEGHLY  S+
Sbjct: 601 DIEGHLYQVSR 611

[Close]

BLAST of Chy5G100880 vs. NCBI nr
Match: XP_022156382.1 (pentatricopeptide repeat-containing protein At1g09820 [Momordica charantia] >XP_022156383.1 pentatricopeptide repeat-containing protein At1g09820 [Momordica charantia])

HSP 1 Score: 1084 bits (2804), Expect = 0.0
Identity = 528/600 (88.00%), Postives = 561/600 (93.50%), Query Frame = 0


Query: 12  RIFPAKIDRNCIFSTNHLPFCTYNSTCTAPKSNDFDPLIISDLISRQQWSILKSHVKFKS 71
           RIFPAKIDR  IFST H P CTYNST TA  SNDFDP IIS+LISRQQWS LKSH KFKS
Sbjct: 10  RIFPAKIDRKYIFSTTHPPLCTYNSTSTASSSNDFDPQIISELISRQQWSNLKSHFKFKS 69

Query: 72  PIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANAKYYPKIRSILD 131
           PIDFLH L+GSG VDPLLVLRYFNWS++EL VNYSIE+FCRLLNLLANAK YPKIRS LD
Sbjct: 70  PIDFLHLLLGSGAVDPLLVLRYFNWSQKELKVNYSIELFCRLLNLLANAKCYPKIRSFLD 129

Query: 132 SFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYRY 191
           SFVKGETNC+ISLIF++LSVC  QFCANSIIADMLVLAYVKNSKT LGLEAFKR+GDY Y
Sbjct: 130 SFVKGETNCTISLIFYTLSVCGDQFCANSIIADMLVLAYVKNSKTSLGLEAFKRSGDYGY 189

Query: 192 KLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGD 251
           KLSVLSCNPLLSALVKE+EFG VEFVYKEMIRRK+SPNLITFNIVINGLCKVGKLNKAGD
Sbjct: 190 KLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKVSPNLITFNIVINGLCKVGKLNKAGD 249

Query: 252 VIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVSPNNVTFNVLID 311
           VIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVSPN+VTFN+LID
Sbjct: 250 VIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVSPNDVTFNILID 309

Query: 312 GFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP 371
           GFCKDEN+SAALKVFEEM+ QGLKP+VVTYNSL+NGLCNEGKLNEA  LLDEM +SNLKP
Sbjct: 310 GFCKDENISAALKVFEEMRIQGLKPSVVTYNSLINGLCNEGKLNEANTLLDEMSNSNLKP 369

Query: 372 NVITYNALINGYCKKKLVEEARELFDNIGKQGLTPNVITFNTLLDGYCKFGKMEEAFSLQ 431
           NV+TYNALINGYCKKKL+EEARELFDNIGKQGL PNVITFNTLLDGYCK GKM+EAF L+
Sbjct: 370 NVVTYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCKCGKMDEAFLLR 429

Query: 432 KVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNLLNEMECRGAKADTVTYNILISAWCEK 491
            +MLEKG  P+VSTYNCLIVGFC+EGKMEEV+NLLNEME RG KAD VTYNILISAWCEK
Sbjct: 430 SLMLEKGLPPDVSTYNCLIVGFCKEGKMEEVENLLNEMEERGLKADLVTYNILISAWCEK 489

Query: 492 REPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTY 551
           REPKKAA LIDEM  +GL+PSHLTYNILLNGYC+EGNLRAALN+RKQMEK+GRWANVVTY
Sbjct: 490 REPKKAAGLIDEMFHRGLRPSHLTYNILLNGYCIEGNLRAALNVRKQMEKDGRWANVVTY 549

Query: 552 NVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYHASQ 611
           NVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII+EEMMEKGFLPDIEGHLY  S+
Sbjct: 550 NVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIREEMMEKGFLPDIEGHLYQVSR 609

[Close]

BLAST of Chy5G100880 vs. TAIR 10
Match: AT1G09820.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 678.3 bits (1749), Expect = 5.7e-195
Identity = 329/581 (56.63%), Postives = 435/581 (74.87%), Query Frame = 0


Query: 32  CTYNSTCT-APKSNDFDPLIISDLISRQQWSILKSHVKFKSPIDFLHQLMGSGDVDPLLV 91
           C+ +ST T +P    +D  +I+DLI +Q WS L  HV   +P +   QL+ S ++DP L 
Sbjct: 26  CSSSSTITGSPCPPRYDVAVIADLIEKQHWSKLGVHVTDINPNELFRQLI-SSELDPDLC 85

Query: 92  LRYFNWSRRELNVNYSIEVFCRLLNLLANAKYYPKIRSILDSFVKGETNCSISLIFHSLS 151
           LRY++W  +  +++ S+E+  +LL+ LANAK Y KIRS LD FV+  ++  +  IFH++S
Sbjct: 86  LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS 145

Query: 152 VCSGQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENE 211
           +C    C NSIIADMLVLAY  NS+  LG EAFKR+G Y YKLS LSC PL+ AL+KEN 
Sbjct: 146 MCD-NVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR 205

Query: 212 FGGVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPNVVTYNT 271
              VE+VYKEMIRRKI PN+ TFN+VIN LCK GK+NKA DV++DMKV+G  PNVV+YNT
Sbjct: 206 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 265

Query: 272 LIDGYCKMGRVGKMYKADAILKEMVANKVSPNNVTFNVLIDGFCKDENLSAALKVFEEMQ 331
           LIDGYCK+G  GKMYKADA+LKEMV N VSPN  TFN+LIDGF KD+NL  ++KVF+EM 
Sbjct: 266 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 325

Query: 332 SQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLVE 391
            Q +KP V++YNSL+NGLCN GK++EA  + D+M+S+ ++PN+ITYNALING+CK  +++
Sbjct: 326 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 385

Query: 392 EARELFDNIGKQGLTPNVITFNTLLDGYCKFGKMEEAFSLQKVMLEKGFLPNVSTYNCLI 451
           EA ++F ++  QG  P    +N L+D YCK GK+++ F+L++ M  +G +P+V TYNCLI
Sbjct: 386 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 445

Query: 452 VGFCREGKMEEVKNLLNEMECRGAKADTVTYNILISAWCEKREPKKAARLIDEMLDKGLK 511
            G CR G +E  K L +++  +G   D VT++IL+  +C K E +KAA L+ EM   GLK
Sbjct: 446 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 505

Query: 512 PSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRW-ANVVTYNVLIQGYCRKGKLEDANG 571
           P HLTYNI++ GYC EGNL+AA N+R QMEKE R   NV +YNVL+QGY +KGKLEDAN 
Sbjct: 506 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 565

Query: 572 LLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYHAS 611
           LLNEMLEKGL+PNR TYEI+KEEM+++GF+PDIEGHL++ S
Sbjct: 566 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVS 603

[Close]

BLAST of Chy5G100880 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 333.6 bits (854), Expect = 3.4e-91
Identity = 188/541 (34.75%), Postives = 292/541 (53.97%), Query Frame = 0


Query: 86  DPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANAKYYPKIRSILDSFVKGET--NCSIS 145
           D  L+L++ NW+    +  +++   C  L++L   K Y K   IL   V  +T  +   S
Sbjct: 61  DQALILKFLNWANP--HQFFTLRCKCITLHILTKFKLY-KTAQILAEDVAAKTLDDEYAS 120

Query: 146 LIFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYRYKLSVLSCNPLLS 205
           L+F SL        + S + D++V +Y + S     L     A  + +   VLS N +L 
Sbjct: 121 LVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLD 180

Query: 206 ALVK-ENEFGGVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFW 265
           A ++ +      E V+KEM+  ++SPN+ T+NI+I G C  G ++ A  + D M+  G  
Sbjct: 181 ATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL 240

Query: 266 PNVVTYNTLIDGYCKMGRV--------------------------------GKMYKADAI 325
           PNVVTYNTLIDGYCK+ ++                                G+M +   +
Sbjct: 241 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 300

Query: 326 LKEMVANKVSPNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCN 385
           L EM     S + VT+N LI G+CK+ N   AL +  EM   GL P+V+TY SL++ +C 
Sbjct: 301 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 360

Query: 386 EGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLTPNVIT 445
            G +N A   LD+M    L PN  TY  L++G+ +K  + EA  +   +   G +P+V+T
Sbjct: 361 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 420

Query: 446 FNTLLDGYCKFGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNLLNEME 505
           +N L++G+C  GKME+A ++ + M EKG  P+V +Y+ ++ GFCR   ++E   +  EM 
Sbjct: 421 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 480

Query: 506 CRGAKADTVTYNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLR 565
            +G K DT+TY+ LI  +CE+R  K+A  L +EML  GL P   TY  L+N YCMEG+L 
Sbjct: 481 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 540

Query: 566 AALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK 592
            AL L  +M ++G   +VVTY+VLI G  ++ +  +A  LL ++  +  +P+  TY  + 
Sbjct: 541 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 598

[Close]

BLAST of Chy5G100880 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 312.0 bits (798), Expect = 1.1e-84
Identity = 183/602 (30.40%), Postives = 317/602 (52.66%), Query Frame = 0


Query: 26  TNHLPFCTYNSTCTAPKSNDFDPLIISDLISRQQWSILKS----HVKFKSPIDFLHQLMG 85
           T+  PF  Y+    + +  +F   I + +  R+   + +S      KFK+  D L  ++ 
Sbjct: 38  TDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKT--DHLIWVLM 97

Query: 86  SGDVDPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANAKYYPKIRSILDSF-VKGETNC 145
               D  LVL +F+W+R   + N  +E  C +++L   +K     +S++ SF  + + N 
Sbjct: 98  KIKCDYRLVLDFFDWARSRRDSN--LESLCIVIHLAVASKDLKVAQSLISSFWERPKLNV 157

Query: 146 SISLI--FHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYRYKLSVLSC 205
           + S +  F  L      + ++  + D+     V           F++  +Y   LSV SC
Sbjct: 158 TDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSC 217

Query: 206 NPLLSALVKE-NEFGGVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMK 265
           N  L+ L K+  +      V++E     +  N+ ++NIVI+ +C++G++ +A  ++  M+
Sbjct: 218 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 277

Query: 266 VWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILK------------------------- 325
           + G+ P+V++Y+T+++GYC+ G + K++K   ++K                         
Sbjct: 278 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 337

Query: 326 -------EMVANKVSPNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 385
                  EM+   + P+ V +  LIDGFCK  ++ AA K F EM S+ + P V+TY +++
Sbjct: 338 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 397

Query: 386 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLT 445
           +G C  G + EA  L  EM    L+P+ +T+  LINGYCK   +++A  + +++ + G +
Sbjct: 398 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 457

Query: 446 PNVITFNTLLDGYCKFGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNL 505
           PNV+T+ TL+DG CK G ++ A  L   M + G  PN+ TYN ++ G C+ G +EE   L
Sbjct: 458 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 517

Query: 506 LNEMECRGAKADTVTYNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCM 565
           + E E  G  ADTVTY  L+ A+C+  E  KA  ++ EML KGL+P+ +T+N+L+NG+C+
Sbjct: 518 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 577

Query: 566 EGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTT 588
            G L     L   M  +G   N  T+N L++ YC +  L+ A  +  +M  +G+ P+  T
Sbjct: 578 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 635

[Close]

BLAST of Chy5G100880 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 312.0 bits (798), Expect = 1.1e-84
Identity = 183/602 (30.40%), Postives = 317/602 (52.66%), Query Frame = 0


Query: 26  TNHLPFCTYNSTCTAPKSNDFDPLIISDLISRQQWSILKS----HVKFKSPIDFLHQLMG 85
           T+  PF  Y+    + +  +F   I + +  R+   + +S      KFK+  D L  ++ 
Sbjct: 38  TDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKT--DHLIWVLM 97

Query: 86  SGDVDPLLVLRYFNWSRRELNVNYSIEVFCRLLNLLANAKYYPKIRSILDSF-VKGETNC 145
               D  LVL +F+W+R   + N  +E  C +++L   +K     +S++ SF  + + N 
Sbjct: 98  KIKCDYRLVLDFFDWARSRRDSN--LESLCIVIHLAVASKDLKVAQSLISSFWERPKLNV 157

Query: 146 SISLI--FHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYRYKLSVLSC 205
           + S +  F  L      + ++  + D+     V           F++  +Y   LSV SC
Sbjct: 158 TDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSC 217

Query: 206 NPLLSALVKE-NEFGGVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMK 265
           N  L+ L K+  +      V++E     +  N+ ++NIVI+ +C++G++ +A  ++  M+
Sbjct: 218 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 277

Query: 266 VWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILK------------------------- 325
           + G+ P+V++Y+T+++GYC+ G + K++K   ++K                         
Sbjct: 278 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 337

Query: 326 -------EMVANKVSPNNVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 385
                  EM+   + P+ V +  LIDGFCK  ++ AA K F EM S+ + P V+TY +++
Sbjct: 338 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 397

Query: 386 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLVEEARELFDNIGKQGLT 445
           +G C  G + EA  L  EM    L+P+ +T+  LINGYCK   +++A  + +++ + G +
Sbjct: 398 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 457

Query: 446 PNVITFNTLLDGYCKFGKMEEAFSLQKVMLEKGFLPNVSTYNCLIVGFCREGKMEEVKNL 505
           PNV+T+ TL+DG CK G ++ A  L   M + G  PN+ TYN ++ G C+ G +EE   L
Sbjct: 458 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 517

Query: 506 LNEMECRGAKADTVTYNILISAWCEKREPKKAARLIDEMLDKGLKPSHLTYNILLNGYCM 565
           + E E  G  ADTVTY  L+ A+C+  E  KA  ++ EML KGL+P+ +T+N+L+NG+C+
Sbjct: 518 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 577

Query: 566 EGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTT 588
            G L     L   M  +G   N  T+N L++ YC +  L+ A  +  +M  +G+ P+  T
Sbjct: 578 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 635

[Close]

BLAST of Chy5G100880 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 296.2 bits (757), Expect = 6.0e-80
Identity = 162/505 (32.08%), Postives = 272/505 (53.86%), Query Frame = 0


Query: 89  LVLRYFNWSRRE--LNVNYSIEVFCRLLNLLANAKYYPKIRSILD--SFVKGETNCSISL 148
           L L++  W  ++  L  ++ +++ C   ++L  A+ Y   R IL   S + G+++     
Sbjct: 92  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGA 151

Query: 149 IFHSLSVCSGQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSA 208
           +  +  +C+    +N  + D+L+  Y++       LE F+  G Y +  SV +CN +L +
Sbjct: 152 LMTTYRLCN----SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 211

Query: 209 LVKENEFGGVEFVYKEMIRRKISPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPN 268
           +VK  E   V    KEM++RKI P++ TFNI+IN LC  G   K+  ++  M+  G+ P 
Sbjct: 212 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 271

Query: 269 VVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVSPNNVTFNVLIDGFCKDENLSAALK 328
           +VTYNT++  YCK GR      A  +L  M +  V  +  T+N+LI   C+   ++    
Sbjct: 272 IVTYNTVLHWYCKKGR---FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 331

Query: 329 VFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYC 388
           +  +M+ + + P  VTYN+L+NG  NEGK+  A  LL+EMLS  L PN +T+NALI+G+ 
Sbjct: 332 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 391

Query: 389 KKKLVEEARELFDNIGKQGLTPNVITFNTLLDGYCKFGKMEEAFSLQKVMLEKGFLPNVS 448
            +   +EA ++F  +  +GLTP+ +++  LLDG CK  + + A      M   G      
Sbjct: 392 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 451

Query: 449 TYNCLIVGFCREGKMEEVKNLLNEMECRGAKADTVTYNILISAWCEKREPKKAARLIDEM 508
           TY  +I G C+ G ++E   LLNEM   G   D VTY+ LI+ +C+    K A  ++  +
Sbjct: 452 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 511

Query: 509 LDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKL 568
              GL P+ + Y+ L+   C  G L+ A+ + + M  EG   +  T+NVL+   C+ GK+
Sbjct: 512 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 571

Query: 569 EDANGLLNEMLEKGLIPNRTTYEII 590
            +A   +  M   G++PN  +++ +
Sbjct: 572 AEAEEFMRCMTSDGILPNTVSFDCL 589

The following BLAST results are available for this feature:

BLAST of Chy5G100880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04504	8.0e-194	56.63	Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	4.8e-90	34.75	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q0WVK7	1.5e-83	30.40	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q9LVQ5	8.5e-79	32.08	Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX...	[more]
Q9CAN0	1.9e-78	31.45	Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop...	[more]

BLAST of Chy5G100880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BCX2	0.0e+00	93.77	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7U323	0.0e+00	93.77	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BXE0	0.0e+00	93.77	pentatricopeptide repeat-containing protein At1g09820 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1DRY0	0.0e+00	88.00	pentatricopeptide repeat-containing protein At1g09820 OS=Momordica charantia OX=...	[more]
A0A6J1HPK5	0.0e+00	84.94	pentatricopeptide repeat-containing protein At1g09820 OS=Cucurbita maxima OX=366...	[more]

BLAST of Chy5G100880 vs. NCBI nr


Match Name	Identity	Description
XP_004144813.1	97.05	pentatricopeptide repeat-containing protein At1g09820 [Cucumis sativus] >XP_0317...	[more]
TYJ96471.1	93.77	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008453581.1	93.77	PREDICTED: pentatricopeptide repeat-containing protein At1g09820 [Cucumis melo] ...	[more]
XP_038891207.1	89.85	pentatricopeptide repeat-containing protein At1g09820 [Benincasa hispida]	[more]
XP_022156382.1	88.00	pentatricopeptide repeat-containing protein At1g09820 [Momordica charantia] >XP_...	[more]

BLAST of Chy5G100880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09820.1	5.7e-195	56.63	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G39710.1	3.4e-91	34.75	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G05670.1	1.1e-84	30.40	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.2	1.1e-84	30.40	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G55840.1	6.0e-80	32.08	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 285..399 e-value: 1.5E-41 score: 144.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 472..540 e-value: 2.8E-20 score: 74.6 coord: 541..603 e-value: 3.2E-13 score: 51.6 coord: 400..471 e-value: 1.5E-23 score: 85.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 76..284 e-value: 6.1E-30 score: 106.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 409..443 e-value: 6.0E-9 score: 33.5 coord: 549..582 e-value: 3.5E-10 score: 37.4 coord: 197..229 e-value: 8.1E-6 score: 23.7 coord: 231..263 e-value: 4.5E-7 score: 27.6 coord: 304..338 e-value: 2.4E-10 score: 37.9 coord: 374..408 e-value: 2.6E-9 score: 34.7 coord: 445..477 e-value: 5.1E-8 score: 30.6 coord: 515..543 e-value: 1.2E-6 score: 26.3 coord: 266..302 e-value: 4.6E-7 score: 27.6 coord: 479..512 e-value: 2.4E-8 score: 31.6 coord: 339..373 e-value: 7.7E-10 score: 36.3
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 437..470 e-value: 1.2E-10 score: 40.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 197..226 e-value: 0.29 score: 11.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 301..350 e-value: 2.3E-19 score: 69.3 coord: 371..420 e-value: 5.4E-19 score: 68.1 coord: 229..277 e-value: 9.5E-17 score: 60.9 coord: 477..524 e-value: 5.3E-17 score: 61.8 coord: 547..589 e-value: 6.1E-15 score: 55.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 337..371 score: 13.230347
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 407..441 score: 13.42765
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 442..476 score: 12.156139
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 302..336 score: 13.515341
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 264..301 score: 11.783455
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 512..546 score: 10.39137
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 229..263 score: 11.542307
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 477..511 score: 13.307076
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 372..406 score: 13.570147
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 194..228 score: 9.185627
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 547..581 score: 14.600509
None	No IPR available	PANTHER	PTHR47932:SF2	OS10G0484300 PROTEIN	coord: 40..606
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 40..606
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 309..440
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 415..579

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G100880.1	Chy5G100880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding