Chy5G093560 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTCTATAGTCACTGAAGCTTGGCAAGGATATCTCCTGCAACTTCAGAAGAATCCTCTTAGAACTAAGGTCAGTTTCATCATTACTCTCAATCAGTTTGATTAAACTTGTTTTAAGGGTCTGTTTAACTTTGTTTTCAGGCAATTACTGCTGGGGTTTTAGCTGGGATCAGTGACTCTGTGGCTCAGAAGATTTCTGGGATCAAGAAACTTCAGTTCAGACGATTTCTTCTTTTGATGGTACTTTTTATTTGTTGTTTTTATTTTGTTGTGATCGAAACAGTTGATAGTATTTTAGATGGGTTTTGGTTTGTAGCTCTATGGCTTTGCTTATGCTGGACCGTTTGGGCATTTTTTGCACAAATTGATGGATAGAATTTTCAAGGGAAAGAAAGGAAATACAACTGTTGCAAAGAAGGTTCATATCTTCTTTTCTACTTTGGAGTTTTTTTGTACTAACTCTTTAATCTTTCTTTGCAATCTTGTTAGGTGTTTTTTTTTGTAGTTGTATTGATGGATGGATGTGTTATATATTTTGTTAGGTGTTATTGGAACAAGTGACTAGCTCTCCTTGGAATAATTTATTTTTCATGATGTATTATGGATTGGTAGTTGAAGGTAATCGAATTTGCAATTACTCCCTGTCTTTATTTTTTGTTGTCAACTTCAACTTCGAATGTTGATTATCTCTTACTATTTCTCAAAAGTGTACTGGTTTTCTGTGTTTTCTTTACCATAGTTTTCATCTTTGTCGAGGAATCATACGAGTTCCTAGTCAAAATTTGAAAAACAAAAGCTTTTAGGCCACTTTTGATAACCATTGTTTTTTGGGTTTTTTTGTACGTTTCTAAATTTCTTGATTTGTTATTACTTTTTTTTTTTAATTAATGTTTTAAAAAACAAAGCCAAATAAAAAAGTTTTTAGAAAACTTCTTTTTCGTTTTAGAATGTGACTAAGAATTCAATTTAAGAAAGATGGAAATCATTATATGAAATTGAGAGGAAACAAACTTAATTTTTAGAACCCAAAAACTAAAGACAACACTGTAACCAAAAGAGGCGTAGTTTCCAAAAACAGAAAACAAAAGAGACTAGAAGTCTAATATATCTTTAAGAAATATGAACACCATAACCATACTAAAGAATAGCAAGTAAATAAGTATTAACTTCAAAAACAGAAAATTATTATTGTTAAACGTATTTTGAAAATAGTTGTTTTATTTGAGCAAAATTAATAGTGTTCATGAATGTCATGTTGACTAAAACGTTGACAATTTTGTTGAATGAACACATTGACCCAAAAATTTATAATTTCAGGAAGACCATGGAGTTTAGTCAAGGCTAAAGTTCGAAAGGACTACCCAACTATTCAGTTGACTGCTTGGCGGGTATATACTCTTTTATAAGTCTAATTTCCTATAAACATCTTTGTAAACTTGGTTTTTTCTGTTTTATTTAGTTTTGTATTGCTGTTACAAATGAAGAAAGCCCCTAGTAAATTAGATAATAACAATAAGATGGTTATGCTTATGATTTGCAGTTCTGGCCTATAGTTGGTTGGGTGAATTACCAATACATGCCTCTCCAATTTCGAGTGATATTTCACAGCTTTGTTGCTTCATGCTGGTGAGACCATTCATCTTTTCTTCTTTTAATTTACAGGAAAAAAAGGAGTCAATGTTCTTGAATTTTAGGGGATAAAAATATATTGTCATGTGCAATATAAGTCTTCTTGTATAGAAGTGAGATCTGTTGCCAATAAAGAAAGTGATCAAAGGTGAAAAGGAAAAATATTGACAGAATATTTACCTATAATGATATAAATATTCTTAAATAATAGAAATTCCTTTCCTTAGTATCACATGATAGGTTACTTGTATTATGTCCTTTCACCAGAATCAGAGAAAGAAAACTGGTGTGCTGACATTGTTTTGTACTAACTTTCAACTATTTGACAGTCTTGTCAATTCTATGATCTTCTGTAATTTTGAAGTTTGTGATAGGAATGGTATTAGAGGGATATTAAGGGATTATTGATAAATAGTTAAGTAGTTTGTTAGGGAAGTTTGTCTCACGATTCTACTTCCTGCAAATATAAGATCCCAACCCGAATACAAATATCCAAGAAATTCACAAGGCAAACACCCGTATGATCGAATATTTACTTCAAGGACAATCCACTGATACAAAATCATGATAATAACTAGAACAAGTAAAGATAGATGAACAAACTCTTCTACGGTCTAAAAGGCTCATAATCATCTTCCAAGAGCCAAACACTCTTCTAAATTCTTCACACCTATAGCCATACTCTCTCCTACTATTTATAACTAAAAAACATAACAAAGTTAATGTCTATTTACTAGAATGCTCCTTACTACTAATCATATTAACTATCCTAATATATTCCTGACTAGGAGCCTTACAGTTTGGTTCAGTGGGTAAGCAATATTTATATGAGTGAAATAGAGCTTAAGATTCATTTCAAGATTGGAAAAGTCCACATATCTCTAATACTTGGGTTTATCTTGTATTTCTGTTATCTTTTATAATTCAATATATTTGGTTCCGATCAGTTTGTCATTGTTTCAAAATAAAATACTCCTGTTTTCTTAAATGAAAATTGCAGTACCAATTTGAGGTTGGATCTTTAGTGGTATTTAAGAAACAATAGACAAAAATATTTTGATATTATGTTGCTGTTACCAAATTTGAGGCAAAGTATTGTGTTTCTTGTGGTTTCAGGGGAATCTTTCTGAATCTGAAAGCAAGATCAGTGAAGGCAGCATAA ATGTCCTCTATAGTCACTGAAGCTTGGCAAGGATATCTCCTGCAACTTCAGAAGAATCCTCTTAGAACTAAGGCAATTACTGCTGGGGTTTTAGCTGGGATCAGTGACTCTGTGGCTCAGAAGATTTCTGGGATCAAGAAACTTCAGTTCAGACGATTTCTTCTTTTGATGCTCTATGGCTTTGCTTATGCTGGACCGTTTGGGCATTTTTTGCACAAATTGATGGATAGAATTTTCAAGGGAAAGAAAGGAAATACAACTGTTGCAAAGAAGGTGTTATTGGAACAAGTGACTAGCTCTCCTTGGAATAATTTATTTTTCATGATGTATTATGGATTGGTAGTTGAAGGAAGACCATGGAGTTTAGTCAAGGCTAAAGTTCGAAAGGACTACCCAACTATTCAGTTGACTGCTTGGCGGTTCTGGCCTATAGTTGGTTGGGTGAATTACCAATACATGCCTCTCCAATTTCGAGTGATATTTCACAGCTTTGTTGCTTCATGCTGGGGAATCTTTCTGAATCTGAAAGCAAGATCAGTGAAGGCAGCATAA ATGTCCTCTATAGTCACTGAAGCTTGGCAAGGATATCTCCTGCAACTTCAGAAGAATCCTCTTAGAACTAAGGCAATTACTGCTGGGGTTTTAGCTGGGATCAGTGACTCTGTGGCTCAGAAGATTTCTGGGATCAAGAAACTTCAGTTCAGACGATTTCTTCTTTTGATGCTCTATGGCTTTGCTTATGCTGGACCGTTTGGGCATTTTTTGCACAAATTGATGGATAGAATTTTCAAGGGAAAGAAAGGAAATACAACTGTTGCAAAGAAGGTGTTATTGGAACAAGTGACTAGCTCTCCTTGGAATAATTTATTTTTCATGATGTATTATGGATTGGTAGTTGAAGGAAGACCATGGAGTTTAGTCAAGGCTAAAGTTCGAAAGGACTACCCAACTATTCAGTTGACTGCTTGGCGGTTCTGGCCTATAGTTGGTTGGGTGAATTACCAATACATGCCTCTCCAATTTCGAGTGATATTTCACAGCTTTGTTGCTTCATGCTGGGGAATCTTTCTGAATCTGAAAGCAAGATCAGTGAAGGCAGCATAA MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRFLLLMLYGFAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPWSLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSVKAA* Homology
BLAST of Chy5G093560 vs. ExPASy Swiss-Prot
Match: Q9ZS51 (Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana OX=3702 GN=PMP22 PE=1 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 3.1e-61 Identity = 107/174 (61.49%), Postives = 140/174 (80.46%), Query Frame = 0
BLAST of Chy5G093560 vs. ExPASy Swiss-Prot
Match: Q54GD8 (PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE=3 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.2e-20 Identity = 50/166 (30.12%), Postives = 98/166 (59.04%), Query Frame = 0
BLAST of Chy5G093560 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18 Identity = 59/166 (35.54%), Postives = 88/166 (53.01%), Query Frame = 0
BLAST of Chy5G093560 vs. ExPASy Swiss-Prot
Match: P42925 (Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2) HSP 1 Score: 85.1 bits (209), Expect = 9.0e-16 Identity = 55/179 (30.73%), Postives = 97/179 (54.19%), Query Frame = 0
BLAST of Chy5G093560 vs. ExPASy Swiss-Prot
Match: Q2KIY1 (Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3) HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15 Identity = 56/171 (32.75%), Postives = 97/171 (56.73%), Query Frame = 0
BLAST of Chy5G093560 vs. ExPASy TrEMBL
Match: A0A0A0LNM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173050 PE=3 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 3.6e-100 Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0
BLAST of Chy5G093560 vs. ExPASy TrEMBL
Match: A0A5D3BQ13 (Peroxisomal membrane protein PMP22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00350 PE=3 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 5.1e-99 Identity = 180/183 (98.36%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Chy5G093560 vs. ExPASy TrEMBL
Match: A0A1S3CDE7 (peroxisomal membrane protein PMP22 OS=Cucumis melo OX=3656 GN=LOC103499432 PE=3 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 5.1e-99 Identity = 180/183 (98.36%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Chy5G093560 vs. ExPASy TrEMBL
Match: A0A6J1L1V0 (peroxisomal membrane protein PMP22 OS=Cucurbita maxima OX=3661 GN=LOC111499089 PE=3 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 4.5e-95 Identity = 170/180 (94.44%), Postives = 177/180 (98.33%), Query Frame = 0
BLAST of Chy5G093560 vs. ExPASy TrEMBL
Match: A0A6J1H5B2 (peroxisomal membrane protein PMP22 OS=Cucurbita moschata OX=3662 GN=LOC111460189 PE=3 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 1.0e-94 Identity = 169/180 (93.89%), Postives = 177/180 (98.33%), Query Frame = 0
BLAST of Chy5G093560 vs. NCBI nr
Match: XP_004147155.1 (peroxisomal membrane protein PMP22 [Cucumis sativus] >KGN61586.1 hypothetical protein Csa_006161 [Cucumis sativus]) HSP 1 Score: 375 bits (962), Expect = 4.26e-131 Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0
BLAST of Chy5G093560 vs. NCBI nr
Match: XP_008460659.1 (PREDICTED: peroxisomal membrane protein PMP22 [Cucumis melo] >KAA0050714.1 peroxisomal membrane protein PMP22 [Cucumis melo var. makuwa] >TYK01447.1 peroxisomal membrane protein PMP22 [Cucumis melo var. makuwa]) HSP 1 Score: 371 bits (952), Expect = 1.43e-129 Identity = 180/183 (98.36%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Chy5G093560 vs. NCBI nr
Match: XP_038906760.1 (peroxisomal membrane protein PMP22 [Benincasa hispida]) HSP 1 Score: 363 bits (931), Expect = 2.44e-126 Identity = 176/185 (95.14%), Postives = 181/185 (97.84%), Query Frame = 0
BLAST of Chy5G093560 vs. NCBI nr
Match: XP_023006319.1 (peroxisomal membrane protein PMP22 [Cucurbita maxima]) HSP 1 Score: 358 bits (918), Expect = 2.34e-124 Identity = 173/185 (93.51%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Chy5G093560 vs. NCBI nr
Match: XP_022959090.1 (peroxisomal membrane protein PMP22 [Cucurbita moschata] >XP_023547635.1 peroxisomal membrane protein PMP22 [Cucurbita pepo subsp. pepo] >KAG6574905.1 Peroxisomal membrane protein PMP22, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013476.1 Peroxisomal membrane protein PMP22 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 357 bits (915), Expect = 6.72e-124 Identity = 172/185 (92.97%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of Chy5G093560 vs. TAIR 10
Match: AT4G14305.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 314.3 bits (804), Expect = 6.4e-86 Identity = 145/179 (81.01%), Postives = 161/179 (89.94%), Query Frame = 0
BLAST of Chy5G093560 vs. TAIR 10
Match: AT4G14305.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 276.6 bits (706), Expect = 1.5e-74 Identity = 127/151 (84.11%), Postives = 138/151 (91.39%), Query Frame = 0
BLAST of Chy5G093560 vs. TAIR 10
Match: AT4G04470.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 236.1 bits (601), Expect = 2.2e-62 Identity = 107/174 (61.49%), Postives = 140/174 (80.46%), Query Frame = 0
BLAST of Chy5G093560 vs. TAIR 10
Match: AT3G24570.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 70.1 bits (170), Expect = 2.1e-12 Identity = 51/211 (24.17%), Postives = 94/211 (44.55%), Query Frame = 0
BLAST of Chy5G093560 vs. TAIR 10
Match: AT5G19750.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 69.3 bits (168), Expect = 3.6e-12 Identity = 45/169 (26.63%), Postives = 85/169 (50.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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