Chy4G089660 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTAGGAGTTGTTGCTGCTGATACTGGAAGTGGTGGATGGGAGTTTTTTGGTGTGGAAATTAACTCAAAATGCGAAAATCTTTCAAGGATTCCCTTAAGGCACTCGAGGCTGATATTCAGTTCGCCAATACCTTGTAATTTCTTCATATGCTGTTCAACTTTCTTATAATTTGATATCTACTCTGGTCTCTGGACTGTGTTTGAATTGCTATTGCAATGTCGGCGTTTCCATTGTCTGGAAATTATCCGCTATGTTTGTTAAATTTTCATGATTCGAACTGAATCGAGTTTCAATATTTTGTTTCTTGTGATATATGCTTTCTCCATGCTTAGATTAGAATGGTATTCGTTCGCTGCGCATGGAGTTTGAAGTTCAGGGAAGTTTCTATGAAAGTGGTTTGATAGGTTATGATTTCTGAGAGAGCCACGAGTTTTAGATTTTGCATCACATTATCTGTACATTCTTGACGACTTAGTAGATTAGATATTTAGTCATCTCGATCTTATTTCTGGAATTGTTCTCCGCCTGTTCATATATGTTATTTTCTGCTTAAGATTTATGAAACGGTTTATTTAAGATTTGTTATCAACTGCTGTGTTTCTTATTTTCTAGATGTTAAGTGTGTTGTAAGCTATCTCGGCTTCTCGGGATTGTATAACTACAGAATTTTACTGCAACAGATCATTTCTCTTGTTTTTAGTGTGCAATAGTTCCGGCAAGCCTTGTTTAATTCATAAGCATTGAAATATAATGCTTTAATACTGAACAGGGCTTCTGATTATCCCAAGGAATACGATGGAGCATGCCTGCAAATGAGATTATCCTATAGCCCGGCTGCGCAGTTTTTTCTCTTCTTCGTGCAATGGACTGATTGTCATCTTGCTGGTGCATTGGGCCTGCTCAGAATTCTAATATATAAGGTACTTCAGACTGCATGAAGTATGACATTTTGACTCCTACATTGCCCAAGTGTGGTGATTGAAGTGGATCAAACTGATCACTAAAGAAAAAAAATTTGATGAAGTAGCTTATACTACTTGCCTCTACACATAATCTTGTCAATCCCGTGAATGTGCTGAATTTGTTTTTAGGCATATGAAGACGGGAAGACTACCATGTCTATTCAAGAAAGAAAGGCTAGTCTCAAAGAGTTCTATGGTAAGTGGCTAATAAGATAAAGACTGCCCTCTCGTCAGCTTGAGGTGTATTAGCATTTGGAGTCTTGCTAATTCTATTTTTTAGTTCTGCAAATACAGGGGTGATATTTCCTTCGCTAGTGCAACTTCAAAGAGGAATTACTGACATAGAAGAAAGAAAACAGAGAGAAGTTTATGCTGCAAAATTCAAAAGAACAGATCGGTTGAACAAAGGAAAGATTTCTGAAATCGACTTGGAAAGAGAGGAAGAATGCGGTATTTGCATGGAGCTAAACAACAAGGTTGTCTTGCCTAATTGCAATCATTCAATGTGCATGAAGTGCTACAGGAGTTGGTATGCTCTCTGCTGTTTTCATGTGCTATGGTTACTAACTGAGGGCTACTTTGTTCTTAGCAAAAAAGTGAACTGGATTATGTGCAGCTGATTTTCTGCAACTTATTATCTCTTTTTCAGGCGCACTCGATCGCAGTCATGCCCCTTCTGCCGTGACAGTCTCAAAAGAGTCAACTCTGGAGATCTTTGGATATGTACCAGTAGTAGTGAAATTGTCGACTTATCCTTCATCTCTGGGGAAAATCTGAAGAGGCTTTTCATGTTCATTAATAAGTTGCCTCTCATTGTTCCTGATCCAAAACTCATCTCTTATTATCTGAATCATTATTGA ATGAGGGCTTCTGATTATCCCAAGGAATACGATGGAGCATGCCTGCAAATGAGATTATCCTATAGCCCGGCTGCGCAGTTTTTTCTCTTCTTCGTGCAATGGACTGATTGTCATCTTGCTGGTGCATTGGGCCTGCTCAGAATTCTAATATATAAGGCATATGAAGACGGGAAGACTACCATGTCTATTCAAGAAAGAAAGGCTAGTCTCAAAGAGTTCTATGGGGTGATATTTCCTTCGCTAGTGCAACTTCAAAGAGGAATTACTGACATAGAAGAAAGAAAACAGAGAGAAGTTTATGCTGCAAAATTCAAAAGAACAGATCGGTTGAACAAAGGAAAGATTTCTGAAATCGACTTGGAAAGAGAGGAAGAATGCGGTATTTGCATGGAGCTAAACAACAAGGTTGTCTTGCCTAATTGCAATCATTCAATGTGCATGAAGTGCTACAGGAGTTGGCGCACTCGATCGCAGTCATGCCCCTTCTGCCGTGACAGTCTCAAAAGAGTCAACTCTGGAGATCTTTGGATATGTACCAGTAGTAGTGAAATTGTCGACTTATCCTTCATCTCTGGGGAAAATCTGAAGAGGCTTTTCATGTTCATTAATAAGTTGCCTCTCATTGTTCCTGATCCAAAACTCATCTCTTATTATCTGAATCATTATTGA ATGAGGGCTTCTGATTATCCCAAGGAATACGATGGAGCATGCCTGCAAATGAGATTATCCTATAGCCCGGCTGCGCAGTTTTTTCTCTTCTTCGTGCAATGGACTGATTGTCATCTTGCTGGTGCATTGGGCCTGCTCAGAATTCTAATATATAAGGCATATGAAGACGGGAAGACTACCATGTCTATTCAAGAAAGAAAGGCTAGTCTCAAAGAGTTCTATGGGGTGATATTTCCTTCGCTAGTGCAACTTCAAAGAGGAATTACTGACATAGAAGAAAGAAAACAGAGAGAAGTTTATGCTGCAAAATTCAAAAGAACAGATCGGTTGAACAAAGGAAAGATTTCTGAAATCGACTTGGAAAGAGAGGAAGAATGCGGTATTTGCATGGAGCTAAACAACAAGGTTGTCTTGCCTAATTGCAATCATTCAATGTGCATGAAGTGCTACAGGAGTTGGCGCACTCGATCGCAGTCATGCCCCTTCTGCCGTGACAGTCTCAAAAGAGTCAACTCTGGAGATCTTTGGATATGTACCAGTAGTAGTGAAATTGTCGACTTATCCTTCATCTCTGGGGAAAATCTGAAGAGGCTTTTCATGTTCATTAATAAGTTGCCTCTCATTGTTCCTGATCCAAAACTCATCTCTTATTATCTGAATCATTATTGA MRASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDCHLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQREVYAAKFKRTDRLNKGKISEIDLEREEECGICMELNNKVVLPNCNHSMCMKCYRSWRTRSQSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISGENLKRLFMFINKLPLIVPDPKLISYYLNHY* Homology
BLAST of Chy4G089660 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 6.7e-90 Identity = 153/215 (71.16%), Postives = 181/215 (84.19%), Query Frame = 0
BLAST of Chy4G089660 vs. ExPASy Swiss-Prot
Match: Q803C1 (E3 ubiquitin-protein ligase rnf8 OS=Danio rerio OX=7955 GN=rnf8 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 7.8e-06 Identity = 34/105 (32.38%), Postives = 51/105 (48.57%), Query Frame = 0
BLAST of Chy4G089660 vs. ExPASy Swiss-Prot
Match: Q13064 (Probable E3 ubiquitin-protein ligase makorin-3 OS=Homo sapiens OX=9606 GN=MKRN3 PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.3e-05 Identity = 26/71 (36.62%), Postives = 39/71 (54.93%), Query Frame = 0
BLAST of Chy4G089660 vs. ExPASy Swiss-Prot
Match: Q13434 (Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens OX=9606 GN=MKRN4P PE=5 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.3e-05 Identity = 24/76 (31.58%), Postives = 38/76 (50.00%), Query Frame = 0
BLAST of Chy4G089660 vs. ExPASy Swiss-Prot
Match: Q9UHC7 (E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3) HSP 1 Score: 50.1 bits (118), Expect = 3.9e-05 Identity = 25/76 (32.89%), Postives = 36/76 (47.37%), Query Frame = 0
BLAST of Chy4G089660 vs. ExPASy TrEMBL
Match: A0A0A0LA78 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731740 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 1.8e-122 Identity = 217/220 (98.64%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of Chy4G089660 vs. ExPASy TrEMBL
Match: A0A5D3DMZ7 (E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00850 PE=4 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 9.9e-121 Identity = 214/220 (97.27%), Postives = 217/220 (98.64%), Query Frame = 0
BLAST of Chy4G089660 vs. ExPASy TrEMBL
Match: A0A1S3B5N9 (uncharacterized protein LOC103486301 OS=Cucumis melo OX=3656 GN=LOC103486301 PE=4 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 9.9e-121 Identity = 214/220 (97.27%), Postives = 217/220 (98.64%), Query Frame = 0
BLAST of Chy4G089660 vs. ExPASy TrEMBL
Match: A0A6J1CVC0 (uncharacterized protein LOC111015127 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015127 PE=4 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 2.6e-113 Identity = 202/220 (91.82%), Postives = 212/220 (96.36%), Query Frame = 0
BLAST of Chy4G089660 vs. ExPASy TrEMBL
Match: A0A6J1F2V6 (LON peptidase N-terminal domain and RING finger protein 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441644 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 6.4e-112 Identity = 199/220 (90.45%), Postives = 208/220 (94.55%), Query Frame = 0
BLAST of Chy4G089660 vs. NCBI nr
Match: XP_011651863.1 (E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >XP_031738614.1 E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >KGN58763.1 hypothetical protein Csa_000946 [Cucumis sativus]) HSP 1 Score: 443 bits (1140), Expect = 1.26e-156 Identity = 217/220 (98.64%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of Chy4G089660 vs. NCBI nr
Match: XP_008442427.1 (PREDICTED: uncharacterized protein LOC103486301 [Cucumis melo] >KAA0044165.1 E3 ubiquitin-protein ligase RNF8-B [Cucumis melo var. makuwa] >TYK24968.1 E3 ubiquitin-protein ligase RNF8-B [Cucumis melo var. makuwa]) HSP 1 Score: 437 bits (1125), Expect = 2.43e-154 Identity = 214/220 (97.27%), Postives = 217/220 (98.64%), Query Frame = 0
BLAST of Chy4G089660 vs. NCBI nr
Match: XP_038904042.1 (E3 ubiquitin-protein ligase AIRP2 isoform X1 [Benincasa hispida]) HSP 1 Score: 429 bits (1104), Expect = 3.86e-151 Identity = 211/220 (95.91%), Postives = 215/220 (97.73%), Query Frame = 0
BLAST of Chy4G089660 vs. NCBI nr
Match: XP_022145744.1 (uncharacterized protein LOC111015127 isoform X1 [Momordica charantia] >XP_022145745.1 uncharacterized protein LOC111015127 isoform X1 [Momordica charantia] >XP_022145746.1 uncharacterized protein LOC111015127 isoform X1 [Momordica charantia]) HSP 1 Score: 413 bits (1061), Expect = 1.38e-144 Identity = 202/220 (91.82%), Postives = 212/220 (96.36%), Query Frame = 0
BLAST of Chy4G089660 vs. NCBI nr
Match: XP_023527445.1 (LON peptidase N-terminal domain and RING finger protein 1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 409 bits (1052), Expect = 3.25e-143 Identity = 200/220 (90.91%), Postives = 208/220 (94.55%), Query Frame = 0
BLAST of Chy4G089660 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein ) HSP 1 Score: 331.6 bits (849), Expect = 4.7e-91 Identity = 153/215 (71.16%), Postives = 181/215 (84.19%), Query Frame = 0
BLAST of Chy4G089660 vs. TAIR 10
Match: AT3G47160.2 (RING/U-box superfamily protein ) HSP 1 Score: 314.7 bits (805), Expect = 6.0e-86 Identity = 144/210 (68.57%), Postives = 173/210 (82.38%), Query Frame = 0
BLAST of Chy4G089660 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein ) HSP 1 Score: 312.8 bits (800), Expect = 2.3e-85 Identity = 143/209 (68.42%), Postives = 172/209 (82.30%), Query Frame = 0
BLAST of Chy4G089660 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein ) HSP 1 Score: 300.4 bits (768), Expect = 1.2e-81 Identity = 141/209 (67.46%), Postives = 173/209 (82.78%), Query Frame = 0
BLAST of Chy4G089660 vs. TAIR 10
Match: AT5G58787.2 (RING/U-box superfamily protein ) HSP 1 Score: 269.2 bits (687), Expect = 2.9e-72 Identity = 130/209 (62.20%), Postives = 161/209 (77.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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