Chy4G089510 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGTTGCGACGCTCTGCCTTCGTAAGTTTAAGAATGAGGCTTCGCTCTCGGAGATGGAGGTTCCCTTCCCTCTGAATGCTTGCAGAGTCTATGACTGACTTCTATGCACGATCATCTTCTTCTTCGCTCCGAATGCTTGCCTCTGCTTTCTTCCGCTAGGGTTTGTTCGTTGAATTTGTAACGTGCGTACTTTTACAGCCTAATTGCATTGTTCTAGTAATATCTCCGGCCAATCAAGACGTAGCAACTTCTGATGCCATTAAACTTGCAAGGGAAGTGGACCCATCTGGTATGTTCTGCTTGTAGTTCCCTTTCTTTTCTTCTTCTCTTCCCTTTTTGTCCTTTAAATTTCTATAAAATTTGTGGCTTTTCAAGCTGGTAATTATGTCTCTTTTTTTTTTCTTTTTTTTTTTTTTTTTGCGATGAACAGGGGAAAGGACTTTGGGGTGTTGACGAAGCTTGACTTTTGACGGACAAGGAACTCTAATGCTTTGGATGTAAGTTATCCTGTTATTAGTTTTGAGGTCTTGCTAGGAGAAATCTTATTGAAGCAAAGATTGAATTGTTAATGAGTAATGTAGAATGCTCAAAGATTCGCAGTTGAACTTCACATTTATTTTTCGTTAATTATAATTCCTACAGTATCAATGAATTAGATATATGCTTTAGTTTAAAGGAGGAATTGAAACATATACGTTCATTTTTTAAAAGGTTTTGGAAGGAAGATCATTTCAACTACAACATCCACGGGTTGGCATGGTGAACCGATCTCAAGGCTGACAAACAAAAATGTAGATATGATTATTGGTATACGTAAGGGCGTGAGTACTTTGCAACTATTCCCGACTATGGACACCTAACAAATAAAATGGGTTCAGAGTGTATGCTAAGCTCCTATCAAATGTTTGGTCCCAATTTCTGAATTGCCTTTCAGTATAATTTTTCTTTTTCCAAAAAGATCATCTTTATTTATGGTGCATTCTTGTTCTTGTAGCATTTGGAGTCCGTGATTAGAGGTCGTCTACCCAGTATCACCTCTTTGATTAACAAAAGCATTGATGAACTTGAGTCTGAGATGGATCATCTTGATTCTAGGCAGGTCTAA ATGCTGTTGCGACGCTCTGCCTTCCCTAATTGCATTGTTCTAGTAATATCTCCGGCCAATCAAGACGTAGCAACTTCTGATGCCATTAAACTTGCAAGGGAAGTGGACCCATCTGGTTTTGGAAGGAAGATCATTTCAACTACAACATCCACGGGTTGGCATGGTGAACCGATCTCAAGGCTGACAAACAAAAATGTAGATATGATTATTGGTATACGTAAGGGCCATTTGGAGTCCGTGATTAGAGGTCGTCTACCCAGTATCACCTCTTTGATTAACAAAAGCATTGATGAACTTGAGTCTGAGATGGATCATCTTGATTCTAGGCAGGTCTAA ATGCTGTTGCGACGCTCTGCCTTCCCTAATTGCATTGTTCTAGTAATATCTCCGGCCAATCAAGACGTAGCAACTTCTGATGCCATTAAACTTGCAAGGGAAGTGGACCCATCTGGTTTTGGAAGGAAGATCATTTCAACTACAACATCCACGGGTTGGCATGGTGAACCGATCTCAAGGCTGACAAACAAAAATGTAGATATGATTATTGGTATACGTAAGGGCCATTTGGAGTCCGTGATTAGAGGTCGTCTACCCAGTATCACCTCTTTGATTAACAAAAGCATTGATGAACTTGAGTCTGAGATGGATCATCTTGATTCTAGGCAGGTCTAA MLLRRSAFPNCIVLVISPANQDVATSDAIKLAREVDPSGFGRKIISTTTSTGWHGEPISRLTNKNVDMIIGIRKGHLESVIRGRLPSITSLINKSIDELESEMDHLDSRQV* Homology
BLAST of Chy4G089510 vs. ExPASy Swiss-Prot
Match: Q9FNX5 (Phragmoplastin DRP1E OS=Arabidopsis thaliana OX=3702 GN=DRP1E PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 5.4e-16 Identity = 62/148 (41.89%), Postives = 74/148 (50.00%), Query Frame = 0
BLAST of Chy4G089510 vs. ExPASy Swiss-Prot
Match: Q8LF21 (Phragmoplastin DRP1C OS=Arabidopsis thaliana OX=3702 GN=DRP1C PE=1 SV=2) HSP 1 Score: 81.6 bits (200), Expect = 6.0e-15 Identity = 59/148 (39.86%), Postives = 70/148 (47.30%), Query Frame = 0
BLAST of Chy4G089510 vs. ExPASy Swiss-Prot
Match: Q8S3C9 (Phragmoplastin DRP1D OS=Arabidopsis thaliana OX=3702 GN=DRP1D PE=1 SV=2) HSP 1 Score: 80.9 bits (198), Expect = 1.0e-14 Identity = 61/148 (41.22%), Postives = 73/148 (49.32%), Query Frame = 0
BLAST of Chy4G089510 vs. ExPASy Swiss-Prot
Match: P42697 (Phragmoplastin DRP1A OS=Arabidopsis thaliana OX=3702 GN=DRP1A PE=1 SV=3) HSP 1 Score: 75.5 bits (184), Expect = 4.3e-13 Identity = 59/149 (39.60%), Postives = 73/149 (48.99%), Query Frame = 0
BLAST of Chy4G089510 vs. ExPASy Swiss-Prot
Match: Q39828 (Dynamin-related protein 5A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 7.4e-13 Identity = 55/150 (36.67%), Postives = 70/150 (46.67%), Query Frame = 0
BLAST of Chy4G089510 vs. ExPASy TrEMBL
Match: A0A7J0FXI8 (DYNAMIN-like 1E OS=Actinidia rufa OX=165716 GN=Acr_15g0014980 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.4e-19 Identity = 60/99 (60.61%), Postives = 68/99 (68.69%), Query Frame = 0
BLAST of Chy4G089510 vs. ExPASy TrEMBL
Match: A0A6J1IER6 (dynamin-related protein 1E-like OS=Cucurbita maxima OX=3661 GN=LOC111473478 PE=3 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.6e-18 Identity = 73/148 (49.32%), Postives = 77/148 (52.03%), Query Frame = 0
BLAST of Chy4G089510 vs. ExPASy TrEMBL
Match: A0A6J1IEJ4 (dynamin-related protein 1E OS=Cucurbita maxima OX=3661 GN=LOC111475096 PE=3 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.6e-18 Identity = 73/148 (49.32%), Postives = 77/148 (52.03%), Query Frame = 0
BLAST of Chy4G089510 vs. ExPASy TrEMBL
Match: A0A5D3CZS6 (Dynamin-related protein 1E OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003250 PE=3 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.6e-18 Identity = 73/148 (49.32%), Postives = 77/148 (52.03%), Query Frame = 0
BLAST of Chy4G089510 vs. ExPASy TrEMBL
Match: A0A5A7TZY6 (Dynamin-related protein 1E OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G003320 PE=3 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.6e-18 Identity = 73/148 (49.32%), Postives = 77/148 (52.03%), Query Frame = 0
BLAST of Chy4G089510 vs. NCBI nr
Match: GFZ02890.1 (DYNAMIN-like 1E [Actinidia rufa]) HSP 1 Score: 105 bits (261), Expect = 3.82e-24 Identity = 60/99 (60.61%), Postives = 68/99 (68.69%), Query Frame = 0
BLAST of Chy4G089510 vs. NCBI nr
Match: CAA2945746.1 (dynamin-related 1E [Olea europaea subsp. europaea]) HSP 1 Score: 101 bits (252), Expect = 1.51e-22 Identity = 74/149 (49.66%), Postives = 80/149 (53.69%), Query Frame = 0
BLAST of Chy4G089510 vs. NCBI nr
Match: CAA2945748.1 (dynamin-related 1E [Olea europaea subsp. europaea]) HSP 1 Score: 101 bits (252), Expect = 2.49e-22 Identity = 74/149 (49.66%), Postives = 80/149 (53.69%), Query Frame = 0
BLAST of Chy4G089510 vs. NCBI nr
Match: KAA0049102.1 (dynamin-related protein 1E [Cucumis melo var. makuwa]) HSP 1 Score: 101 bits (252), Expect = 2.58e-22 Identity = 74/149 (49.66%), Postives = 80/149 (53.69%), Query Frame = 0
BLAST of Chy4G089510 vs. NCBI nr
Match: TYK17461.1 (dynamin-related protein 1E [Cucumis melo var. makuwa]) HSP 1 Score: 101 bits (252), Expect = 2.58e-22 Identity = 74/149 (49.66%), Postives = 80/149 (53.69%), Query Frame = 0
BLAST of Chy4G089510 vs. TAIR 10
Match: AT3G60190.1 (DYNAMIN-like 1E ) HSP 1 Score: 85.1 bits (209), Expect = 3.9e-17 Identity = 62/148 (41.89%), Postives = 74/148 (50.00%), Query Frame = 0
BLAST of Chy4G089510 vs. TAIR 10
Match: AT1G14830.1 (DYNAMIN-like 1C ) HSP 1 Score: 81.6 bits (200), Expect = 4.3e-16 Identity = 59/148 (39.86%), Postives = 70/148 (47.30%), Query Frame = 0
BLAST of Chy4G089510 vs. TAIR 10
Match: AT2G44590.1 (DYNAMIN-like 1D ) HSP 1 Score: 80.9 bits (198), Expect = 7.3e-16 Identity = 61/148 (41.22%), Postives = 73/148 (49.32%), Query Frame = 0
BLAST of Chy4G089510 vs. TAIR 10
Match: AT2G44590.2 (DYNAMIN-like 1D ) HSP 1 Score: 80.9 bits (198), Expect = 7.3e-16 Identity = 61/148 (41.22%), Postives = 73/148 (49.32%), Query Frame = 0
BLAST of Chy4G089510 vs. TAIR 10
Match: AT2G44590.3 (DYNAMIN-like 1D ) HSP 1 Score: 80.9 bits (198), Expect = 7.3e-16 Identity = 61/148 (41.22%), Postives = 73/148 (49.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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