Chy4G089190 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G089190
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RING-CH-type domain-containing protein
Location	chrH04: 26953978 .. 26956136 (-)
RNA-Seq Expression	Chy4G089190
Synteny	Chy4G089190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCCTCAGGAAGTTTCCCAGTCCGACATTGATTTGGAACAGGGGAATCATCGGCGGTCTGTCAGCGGTAGTGATTTGAGCGCCGATTGTAGCGTCTATTTCTCTGACGCCGACGAGGGTTCGTGTTATTCTCAGTTTTTTTCGACCAACGGTGGTTCTTACGATGAGTATAGGTTTGCTTTCGTTTCTCAGCCGGAGGTTGGAGTTGTTTCGGATTCTCGGCGAGTTTCGTCGGTTTCGGATCGTTCTGTGGAGGTTGAAAATGAAAATGGGATCACTGAAATTAAGGTGCATTCAGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCGTGCAAAGATGATTTAGCCGCTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAATAAGTAAGTCTAATCCTTTATTTTCATTAAGTTTTGATTTTTTTTCTTTCCATGGATTCTGATCATATTTTTCACTCAGGCTATGTTTATGATATGCTTCTTAGTTCTTTTGAGTTCATATTTTCATATTATTTTCTTGCTGCTCTTCTATTGGTATGTTCTTGTGGTGAGCATCTTCTGTGTTAATCTTCATGGGGTTGGACTATTCACAAATTTAAATGAGAGATGTATTTTAGACTTAAACATTACCTTTTCTTAGCTTTAAGGTAAATCCCTCAGTGTAATGAGCTTGAATGTTGCAGATATAAGGATGCTTACTTAGAGGAAAAGCTTAGACGTATGAAGTAATAAGAGTAAAGCATACGAAAGTGCATTTATGCATCTCCAAGCAAGTTACACTGATTATTCCTTCTTCCTTCGCGTTTTTGTGATGGCTTAGGAATCTCTTCCTTTCTCTCACCCCCCGCCCTCGTGTAGTGGATACTCCATTGTTATACTGAAGCATAATTCAGCTGAAGTGGGGAAAAGTTATATTGATCACTTTAAGATCTCTAGCTTCTTGATATGCCAAGTTTGCAGTTTTCCCAACCTGTTTAGTCACTCAATTAACTCCTTCAGTTCCTAACAAATGGCAGTCCATCTTCTGTTAACCAACTGTTGGTTCCCCACTAATAAACATATTGATCATGGAACTTTGTCTCAGTGCATTTCTAATGAATCTATTTCTCATCGATCTGATTCACGCTCGCCCTTGATCTAACTTTCCTTACAGTACAATAGTTTTTGTTCCAATTGCTGGGCTCGATCCAAGTCACTACTTAAGAGTTCACTGTACTGAGCTGCTTTAGAAGCGTACTATCCATAATTTGCTTCTCCAAGGAAAATAATGTTGTGGAGTTTTGTTGAATGTCGTATATGTGCTGTTATATAGCCAAAAGAAAGATGTCCATAAAGAGTTTTAAGGCTGTCAGGATGTAAGGTTAAGGGTTATGCTATCTGTTGTTGAAACAAGATGATCAATATTTCCTTTGATGTTAAAATTACTTTTTCAATATCAATAATGAATGGAATATGTCAGCACACATTTGAAAAAGTGTTATTTTTTAATCACCGAGAAACAAACAGGCAATTTGTTCTTGCACTTGGCTCTGAATTTCATTGACAATTGATTTGACTCCACTCAGAAAAAGGTTCCTGAGTATTATTCCTGGACAAAGATATAGACATAAGTGATTTTAGGCATTTTTGATCAACTATTTATTGTGGGTTTCGATCAAATGTCTTATTAATTGGTGACATTGGATTGGGGCCGGGCTGTATTACATTGCAGATTTACACCATGTGATTTTTGTGTTGACAATTTTTCAATTTCTTTTCGATGCTTCAAAATGGACAAGGGGATTTGCATATTTGTTCCTTTGACTACTTCAATCATTATTCCTAATCTTCTTCAATCTTATTGTCAGGACATGTGAGATTTGTCATTCCATTGCTCGAAATATTCTCGGACCAAATGAGGTTGAGCTAACAGATCAGTCTAATGAATCCAACAACGCCTCCTCGACAACTACAGTTGCTGCATCAATTCCCTCATCAGATAGCCAAAGTTTCTGGCGTGGGCACAGGTTTCTGAATTTTCTGCTCGCTTGTATGGTATTTGCTTTTGTTATATCTTGGCTGTTTCACTTCAATGTGCCCTCGTAA

mRNA sequence

ATGGGGCCTCAGGAAGTTTCCCAGTCCGACATTGATTTGGAACAGGGGAATCATCGGCGGTCTGTCAGCGGTAGTGATTTGAGCGCCGATTGTAGCGTCTATTTCTCTGACGCCGACGAGGGTTCGTGTTATTCTCAGTTTTTTTCGACCAACGGTGGTTCTTACGATGAGTATAGGTTTGCTTTCGTTTCTCAGCCGGAGGTTGGAGTTGTTTCGGATTCTCGGCGAGTTTCGTCGGTTTCGGATCGTTCTGTGGAGGTTGAAAATGAAAATGGGATCACTGAAATTAAGGTGCATTCAGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCGTGCAAAGATGATTTAGCCGCTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAATAAGACATGTGAGATTTGTCATTCCATTGCTCGAAATATTCTCGGACCAAATGAGGTTGAGCTAACAGATCAGTCTAATGAATCCAACAACGCCTCCTCGACAACTACAGTTGCTGCATCAATTCCCTCATCAGATAGCCAAAGTTTCTGGCGTGGGCACAGGTTTCTGAATTTTCTGCTCGCTTGTATGGTATTTGCTTTTGTTATATCTTGGCTGTTTCACTTCAATGTGCCCTCGTAA

Coding sequence (CDS)

ATGGGGCCTCAGGAAGTTTCCCAGTCCGACATTGATTTGGAACAGGGGAATCATCGGCGGTCTGTCAGCGGTAGTGATTTGAGCGCCGATTGTAGCGTCTATTTCTCTGACGCCGACGAGGGTTCGTGTTATTCTCAGTTTTTTTCGACCAACGGTGGTTCTTACGATGAGTATAGGTTTGCTTTCGTTTCTCAGCCGGAGGTTGGAGTTGTTTCGGATTCTCGGCGAGTTTCGTCGGTTTCGGATCGTTCTGTGGAGGTTGAAAATGAAAATGGGATCACTGAAATTAAGGTGCATTCAGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCGTGCAAAGATGATTTAGCCGCTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAATAAGACATGTGAGATTTGTCATTCCATTGCTCGAAATATTCTCGGACCAAATGAGGTTGAGCTAACAGATCAGTCTAATGAATCCAACAACGCCTCCTCGACAACTACAGTTGCTGCATCAATTCCCTCATCAGATAGCCAAAGTTTCTGGCGTGGGCACAGGTTTCTGAATTTTCTGCTCGCTTGTATGGTATTTGCTTTTGTTATATCTTGGCTGTTTCACTTCAATGTGCCCTCGTAA

Protein sequence

MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRFAFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTDQSNESNNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS*

Homology

[Close]

BLAST of Chy4G089190 vs. ExPASy TrEMBL
Match: A0A0A0LAC9 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733180 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 4.8e-126
Identity = 229/231 (99.13%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTDQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELT+QSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           NNASSTTTVAASIPSSDSQSFW GHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 NNASSTTTVAASIPSSDSQSFWCGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of Chy4G089190 vs. ExPASy TrEMBL
Match: A0A1S3B5A7 (uncharacterized protein LOC103486339 OS=Cucumis melo OX=3656 GN=LOC103486339 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 8.1e-126
Identity = 228/231 (98.70%), Postives = 229/231 (99.13%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFVSQPEVGVV DSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTDQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELT+QSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           NNASSTTTVAASIPSSDS SFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of Chy4G089190 vs. ExPASy TrEMBL
Match: A0A6J1CWG7 (uncharacterized protein LOC111015024 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015024 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.0e-120
Identity = 219/231 (94.81%), Postives = 224/231 (96.97%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           M   EVSQSDIDLEQGNHRRSVSGSD+SADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFV+QPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTDQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHSIARNILGP+EVELT+QS ES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           NNASST  VAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of Chy4G089190 vs. ExPASy TrEMBL
Match: A0A6J1FUW7 (uncharacterized protein LOC111447072 OS=Cucurbita moschata OX=3662 GN=LOC111447072 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.1e-117
Identity = 214/232 (92.24%), Postives = 222/232 (95.69%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           M P +VSQSDIDLEQG+HRRSVSGS+LSADCSVYFSDADEGSCYSQF+STNGGSYDEYRF
Sbjct: 1   MAPPQVSQSDIDLEQGDHRRSVSGSELSADCSVYFSDADEGSCYSQFYSTNGGSYDEYRF 60

Query: 61  AFVSQPEVG-VVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQ 120
           AFVSQP VG VVSDSRR+SS SDRSVEVENENGITEIKVH  KVERDCRICHLGLESNSQ
Sbjct: 61  AFVSQPGVGVVVSDSRRLSSASDRSVEVENENGITEIKVHLGKVERDCRICHLGLESNSQ 120

Query: 121 ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTDQSNE 180
           ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHS+ARNILGPNEVE T+QSNE
Sbjct: 121 ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSVARNILGPNEVESTEQSNE 180

Query: 181 SNNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           SNNASSTT VAASIPSSD+ SFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 SNNASSTTAVAASIPSSDTPSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232

[Close]

BLAST of Chy4G089190 vs. ExPASy TrEMBL
Match: A0A6J1I5G1 (uncharacterized protein LOC111470088 OS=Cucurbita maxima OX=3661 GN=LOC111470088 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 6.9e-117
Identity = 215/232 (92.67%), Postives = 221/232 (95.26%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           M P EVSQSDIDLEQG+HRRSVSGS+LSADCSVYFSDADEGSCYSQF+STNGGSYDEYRF
Sbjct: 1   MAPPEVSQSDIDLEQGDHRRSVSGSELSADCSVYFSDADEGSCYSQFYSTNGGSYDEYRF 60

Query: 61  AFVSQPEVG-VVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQ 120
           AFVSQP VG VVSDSRR+SS SDRSVEVENE GITEIKVH  KVERDCRICHLGLESNSQ
Sbjct: 61  AFVSQPGVGVVVSDSRRLSSASDRSVEVENEIGITEIKVHLGKVERDCRICHLGLESNSQ 120

Query: 121 ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTDQSNE 180
           ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHS+ARNILGPNEVE T+QSNE
Sbjct: 121 ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSVARNILGPNEVESTEQSNE 180

Query: 181 SNNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           SNNASSTT VAASIPSSDS SFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 SNNASSTTAVAASIPSSDSPSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232

[Close]

BLAST of Chy4G089190 vs. NCBI nr
Match: XP_038904640.1 (uncharacterized protein LOC120090971 [Benincasa hispida])

HSP 1 Score: 460 bits (1184), Expect = 2.38e-163
Identity = 230/231 (99.57%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTDQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELT+QSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231
           NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of Chy4G089190 vs. NCBI nr
Match: XP_004137745.1 (uncharacterized protein LOC101218915 [Cucumis sativus] >KGN58813.1 hypothetical protein Csa_002551 [Cucumis sativus])

HSP 1 Score: 457 bits (1176), Expect = 3.95e-162
Identity = 229/231 (99.13%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTDQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELT+QSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231
           NNASSTTTVAASIPSSDSQSFW GHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 NNASSTTTVAASIPSSDSQSFWCGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of Chy4G089190 vs. NCBI nr
Match: XP_008442485.1 (PREDICTED: uncharacterized protein LOC103486339 [Cucumis melo])

HSP 1 Score: 456 bits (1174), Expect = 7.97e-162
Identity = 228/231 (98.70%), Postives = 229/231 (99.13%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFVSQPEVGVV DSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTDQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELT+QSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231
           NNASSTTTVAASIPSSDS SFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of Chy4G089190 vs. NCBI nr
Match: XP_022145623.1 (uncharacterized protein LOC111015024 isoform X2 [Momordica charantia])

HSP 1 Score: 438 bits (1126), Expect = 1.66e-154
Identity = 218/227 (96.04%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 5   EVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRFAFVS 64
           EVSQSDIDLEQGNHRRSVSGSD+SADCSVYFSDADEGSCYSQFFSTNGGSYDEYRFAFV+
Sbjct: 5   EVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRFAFVA 64

Query: 65  QPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIP 124
           QPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVH AKVERDCRICHLGLESNSQESGIP
Sbjct: 65  QPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQESGIP 124

Query: 125 IELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTDQSNESNNAS 184
           IELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHSIARNILGP+EVELT+QS ESNNAS
Sbjct: 125 IELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTESNNAS 184

Query: 185 STTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231
           ST  VAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 185 STAAVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231

[Close]

BLAST of Chy4G089190 vs. NCBI nr
Match: XP_023538705.1 (uncharacterized protein LOC111799566 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429 bits (1103), Expect = 5.51e-151
Identity = 215/232 (92.67%), Postives = 222/232 (95.69%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60
           M P +VSQSDIDLEQG+HRRSVSGS+LSADCSVYFSDADEGSCYSQF+STNGGSYDEYRF
Sbjct: 1   MAPPQVSQSDIDLEQGDHRRSVSGSELSADCSVYFSDADEGSCYSQFYSTNGGSYDEYRF 60

Query: 61  AFVSQPEVGVV-SDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQ 120
           AFVSQP VGVV SDSRR+SS SDRSVEVENENGITEIKVH  KVERDCRICHLGLESNSQ
Sbjct: 61  AFVSQPGVGVVVSDSRRLSSASDRSVEVENENGITEIKVHLGKVERDCRICHLGLESNSQ 120

Query: 121 ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTDQSNE 180
           ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHS+ARNILGPNEVE T+QSNE
Sbjct: 121 ESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSVARNILGPNEVESTEQSNE 180

Query: 181 SNNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 231
           SNNASSTT VAASIPSSDS SFWRGHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 181 SNNASSTTAVAASIPSSDSPSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232

[Close]

BLAST of Chy4G089190 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 6.3e-54
Identity = 103/179 (57.54%), Postives = 128/179 (71.51%), Query Frame = 0


Query: 53  GSYDEYRFAFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHL 112
           G  +  R +   + E  +V D  R S+ S  SVE++ E G+ E  VH ++ ERDCRICH+
Sbjct: 25  GDGEPRRSSGAVEKEEEIVKDEERRSNASVCSVEIDLELGLPEKVVHLSQSERDCRICHM 84

Query: 113 GLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVE 172
            L++ + ESG+PIELGCSCK DLAAAHKHCAETWFKIKGNK CE+C SIA N++G  EVE
Sbjct: 85  SLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAGNVVGSVEVE 144

Query: 173 LTDQSNESNNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
             +  NE+N   + T   +     + +SFW+GHRFLNFLLACMVFAFVISWLFHFNVPS
Sbjct: 145 SEESRNEANGVENLTLRTSGPRLVEGRSFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 203

[Close]

BLAST of Chy4G089190 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 6.3e-46
Identity = 114/230 (49.57%), Postives = 144/230 (62.61%), Query Frame = 0


Query: 9   SDIDLEQGN----HRRSVSGSDLSADCSVYFSDA-DEGSCYSQFFSTNGGSYDEYRFAFV 68
           +DIDLEQG     HRRS+ GSD+    SVY+SD  D  SCYS F+ST GGSY EY     
Sbjct: 3   TDIDLEQGGAFGYHRRSLDGSDV----SVYYSDGEDVMSCYSYFYSTTGGSY-EYE---- 62

Query: 69  SQPEVGVVSDSRRVSSV-SDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESG 128
                     SR+VSSV S  S E+++++        +A  E+DCRICHLG+E++    G
Sbjct: 63  -------GDQSRKVSSVMSPSSSEIDDDDA-------TAPPEKDCRICHLGVETS---GG 122

Query: 129 IPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNE-VELTDQSNESN 188
             IELGCSCKDDLA AH+ CAETWFKIKG+KTCEIC S+ARN+ G NE V  T +  E  
Sbjct: 123 GAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVARNVGGANEMVGSTMEERELR 182

Query: 189 NASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
           N   T        ++  ++ W+  R +N +LACMVF F ISW+FHF+V S
Sbjct: 183 NGEETAAGEGG-GATVVENRWQPQRVVNLVLACMVFGFFISWIFHFHVSS 205

[Close]

BLAST of Chy4G089190 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 9.7e-39
Identity = 100/227 (44.05%), Postives = 126/227 (55.51%), Query Frame = 0


Query: 9   SDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSC-YSQFFSTNGGSY-DEYRFAFVSQP 68
           S IDLE G+  R    SD+S +        D  SC Y   F +   S+  E+  A     
Sbjct: 7   SHIDLENGSGERQYRPSDVSGE--------DSSSCDYDYDFHSAVRSFCGEFEIA----D 66

Query: 69  EVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIE 128
           ++   +D+  V+S S R                    E+DCRICHLGLES+  E G P+ 
Sbjct: 67  DLDDETDTESVASGSIR-----------------GSPEKDCRICHLGLESSRHECGDPMV 126

Query: 129 LGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILG-PNEV-ELTDQSNESNNAS 188
           LGCSCKDDL   HK CA+TWFKIKGNKTCEIC SIA+N     NE+ + T ++N  +  +
Sbjct: 127 LGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQNFFKVDNEIGQTTVETNVDDVEA 186

Query: 189 STTTVAASIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 232
             T    +   SD +   RG+RFLNFLL CMV AFVISW FHFN+PS
Sbjct: 187 GNTPTMVATSDSDDRRLCRGNRFLNFLLTCMVCAFVISWFFHFNLPS 204

[Close]

BLAST of Chy4G089190 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 8.3e-30
Identity = 82/219 (37.44%), Postives = 107/219 (48.86%), Query Frame = 0


Query: 44  YSQFFSTNGGSYDEYRFAFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKV 103
           YS   S +G S D    + V     GV +  +++ S   +             K    K 
Sbjct: 21  YSVEISIDGDSSDWDSLSQVDLESGGVPAPEKQLHSGGKKR---RTRRRKRRKKKKKKKG 80

Query: 104 ERDCRICHLGLESNSQES-------------------------------GIPIELGCSCK 163
            RDCRICHL LE+N +                                 G+P++LGCSCK
Sbjct: 81  GRDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCK 140

Query: 164 DDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTDQSNESNNASSTTTVAA- 223
            DL  AH  CAETWFKIKGN TCEIC ++A N+ G       +QSN  + AS+ +  AA 
Sbjct: 141 GDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAG-------EQSNPESTASTHSQAAAG 200

Query: 224 -SIPSSDSQSFWRGHRFLNFLLACMVFAFVISWLFHFNV 230
            S+  ++ +  W G   +NFLLA MVFAFV+SWLFHF V
Sbjct: 201 QSLTQTEPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229

[Close]

BLAST of Chy4G089190 vs. TAIR 10
Match: AT5G01070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 4.3e-18
Identity = 60/147 (40.82%), Postives = 75/147 (51.02%), Query Frame = 0


Query: 9   SDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSC-YSQFFSTNGGSY-DEYRFAFVSQP 68
           S IDLE G+  R    SD+S +        D  SC Y   F +   S+  E+  A     
Sbjct: 7   SHIDLENGSGERQYRPSDVSGE--------DSSSCDYDYDFHSAVRSFCGEFEIA----D 66

Query: 69  EVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIE 128
           ++   +D+  V+S S R                    E+DCRICHLGLES+  E G P+ 
Sbjct: 67  DLDDETDTESVASGSIR-----------------GSPEKDCRICHLGLESSRHECGDPMV 124

Query: 129 LGCSCKDDLAAAHKHCAETWFKIKGNK 154
           LGCSCKDDL   HK CA+TWFKIKGNK
Sbjct: 127 LGCSCKDDLGYVHKQCADTWFKIKGNK 124

The following BLAST results are available for this feature:

BLAST of Chy4G089190 vs.


Match Name	E-value	Identity	Description

BLAST of Chy4G089190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAC9	4.8e-126	99.13	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G73318...	[more]
A0A1S3B5A7	8.1e-126	98.70	uncharacterized protein LOC103486339 OS=Cucumis melo OX=3656 GN=LOC103486339 PE=...	[more]
A0A6J1CWG7	3.0e-120	94.81	uncharacterized protein LOC111015024 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1FUW7	3.1e-117	92.24	uncharacterized protein LOC111447072 OS=Cucurbita moschata OX=3662 GN=LOC1114470...	[more]
A0A6J1I5G1	6.9e-117	92.67	uncharacterized protein LOC111470088 OS=Cucurbita maxima OX=3661 GN=LOC111470088...	[more]

BLAST of Chy4G089190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904640.1	2.38e-163	99.57	uncharacterized protein LOC120090971 [Benincasa hispida]	[more]
XP_004137745.1	3.95e-162	99.13	uncharacterized protein LOC101218915 [Cucumis sativus] >KGN58813.1 hypothetical ...	[more]
XP_008442485.1	7.97e-162	98.70	PREDICTED: uncharacterized protein LOC103486339 [Cucumis melo]	[more]
XP_022145623.1	1.66e-154	96.04	uncharacterized protein LOC111015024 isoform X2 [Momordica charantia]	[more]
XP_023538705.1	5.51e-151	92.67	uncharacterized protein LOC111799566 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy4G089190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	6.3e-54	57.54	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	6.3e-46	49.57	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	9.7e-39	44.05	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	8.3e-30	37.44	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.1	4.3e-18	40.82	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 106..159 e-value: 1.1E-17 score: 74.7
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 107..158 e-value: 1.3E-9 score: 38.0
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 99..165 score: 18.613285
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 93..166 e-value: 7.9E-15 score: 56.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 8..231
None	No IPR available	PANTHER	PTHR46214:SF5	OS01G0850200 PROTEIN	coord: 8..231
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 107..159 e-value: 3.07183E-12 score: 57.7224
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 104..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G089190.1	Chy4G089190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding