Chy4G088610 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G088610
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH04: 26638669 .. 26640980 (-)
RNA-Seq Expression	Chy4G088610
Synteny	Chy4G088610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGCTCCTCCACACAAAACTGCATTTCCTCACACTTCAAATATTCACTCAACCTGCTTCTTCCACCGCCAAATGCCAATTCCCGTCGTTTTTCACAGCCAGTTTTGCAGTACGTTCTTGTTTTCTCTCAATAATTCCTGCCTATTTTATCCTGGTTTCTTCCTTGTCCATTCTTGTTCGTCGATTTCTTCCGTTTAATTATTGCTCCTTCCTCCTCCTCAATTCTATTATGGTATCATCGGATTTGACTCGTCGTCGTACCTCTGCAACTCTGAATTAATCTCTTCCTCTTTCTTCTGTTTCATTATTGCACTTGATGCTTCCAGATTCAACTATGGCTCAGCAGGTACCTATCTCTCTCTGATTTGTTTTTTTTTTAGTGTTTAATTTTTCCCTAATTTTGTGTTTGATTTCCGAATTTAGGAAGATGGATGGCCATTAGGGTTGCGGGTTATGAACGCCAGAGTTGGTGGGGTGGCGGGAAATCATGATATCTCTGCTTCGGTTTCTTTCAATACTTTGCGTACTCATTCTCCTAGTTCCTTCACTGATTCTTCCTCAGATCTTGACACAGAGGTTTGTTACTTCCATTTTTTCTTCTTCTTCTCTTTAACTGTGTGCTTGGGATTGGAGAGGCTGTAAATTTAGTACATTATGCAAATACAGTGCTTTGGGTTGTGTCATAATTAGGACTGCTTTTCATTGTCTTGTTCTTCTGAAAGTGATTGAGTTGAAGTAGTTGCAGCCTTGCATGTTGCCCTTTTTCAAAATGTTTCTTGATTTTCTTTAGGCCGCCTTTCTAAGGTTTAAAAGAGTGCTATAGTAATTTGAATTGAAATTGGTGATGGTTAGTGAGTTCATTTTCTTCGTTTTATTCTTTTGCTTCTTACCTTTCCTCACGTTTTGCTTTCTCTTCTTATTTGTCGCTCTTGTATCCTATCACAATAAGGGCTGAATTGAAAGTTCAGCCATAAAATGTGAGTGAGGGAAAAGAGCAAACTCAAGAGGAAATATGGGTAGTGAGAGCTCGAAGTTAAAATATCATACTTTGAAGTTTGATTAATTTTAGTCCATATACTTAAAATTATCTAATTTTAGCTTCTATCAATCTTAAATTGATTATCCCCCCCCCCAAAAAAAAAAAAAAAAAAAATTATATTGTTATCCATTACGTTTTTACTTAGAATATTCATATATTGCATTTCCCTGCATAAAAAACTAATTTAGGTAAACATTAACTTTGGACCAAAATGATATTTTAGCTTTGATGTTAAATAATTTTGTTTTGAGAAATCAATTTTTAGGTCGGTCTTAAAATATTCGAAGGCTTTTAGTTTTGGTATGGTATTTTTTTGCCTCTGTTTTTGCTAAATTCCATCAGGTAAATGATTTTTAGTCAACTGGATCATTCTACCCTGACAAGAGCATCACGCTAGGGAGTCTCATTGGAGTCTCTAGCATTCTTGAGCTATCACGAAGATCAACAAAAGGAAACAAAGTGGAAATACTCGAAGATAAGAAAAAGTACAAGTCCAAGCCAGGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGTCCTGATGCTGTGAGCTTCAGCAGCTCTCCTTCATTTCAACACTCGCTTGAAGCAGAAAGAAAAGCTACAAGAAATCGCAGGAATCACAATCCGACCCTTTACGGACCCAATGATTACTCACCTGTTCCTGGAGCAAACTATTTGTTTTCCAGTGATCAAGTTGATCCTGTATCTTTTGAACAGGTGGGCGAAGAAGAAAGCAGAAGATCAGATGGAGAACTTGTTCGAAATGGTAACAGTCAGGGGATTCCTCTACTCTTTTCATGTCTATATTGCCAACTGATTAAATAATTCTCTCTTTGATTCGTACATTAACATTTGAATGCAACTTGTTCTTCATAAAAATGATGCATTTCAAATGTTATATGGTCATTTCTTTCATTCTACCATTTCATTTGTAGGAGACTTACTTGTAATAATCATCATCCAGCCATTGTGTTTGGGTCAGATAAGTTAGTGAACCACATTGATTGATCCATAAAACCATAACCAGTAAGTTGCAACCTTGGTTAGCCTTTTCATATCTGTTAGCATATGATTGAAGAAAAAACTTAAAATGCTCGTATAGATGTGCTATATTTGATAGTAAATAACCGACAATGATAACTCTGAGCAAACAAACCTTATCGAACGTTTGCTCACATTGAACTGGATATATCCAGATGATAACAGATGCTCAATAGGTGAAGTAAAGATCATATACCCAGATGGAGCTTACTCTGTTTTCAAGTAA

mRNA sequence

ATGTCTGCTCCTCCACACAAAACTGCATTTCCTCACACTTCAAATATTCACTCAACCTGCTTCTTCCACCGCCAAATGCCAATTCCCGTCGTTTTTCACAGCCAGTTTTGCAATTCAACTATGGCTCAGCAGGAAGATGGATGGCCATTAGGGTTGCGGGTTATGAACGCCAGAGTTGGTGGGGTGGCGGGAAATCATGATATCTCTGCTTCGGTTTCTTTCAATACTTTGCGTACTCATTCTCCTAGTTCCTTCACTGATTCTTCCTCAGATCTTGACACAGAGTCAACTGGATCATTCTACCCTGACAAGAGCATCACGCTAGGGAGTCTCATTGGAGTCTCTAGCATTCTTGAGCTATCACGAAGATCAACAAAAGGAAACAAAGTGGAAATACTCGAAGATAAGAAAAAGTACAAGTCCAAGCCAGGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGTCCTGATGCTGTGAGCTTCAGCAGCTCTCCTTCATTTCAACACTCGCTTGAAGCAGAAAGAAAAGCTACAAGAAATCGCAGGAATCACAATCCGACCCTTTACGGACCCAATGATTACTCACCTGTTCCTGGAGCAAACTATTTGTTTTCCAGTGATCAAGTTGATCCTGTATCTTTTGAACAGGTGGGCGAAGAAGAAAGCAGAAGATCAGATGGAGAACTTGTTCGAAATGATGATAACAGATGCTCAATAGGTGAAGTAAAGATCATATACCCAGATGGAGCTTACTCTGTTTTCAAGTAA

Coding sequence (CDS)

ATGTCTGCTCCTCCACACAAAACTGCATTTCCTCACACTTCAAATATTCACTCAACCTGCTTCTTCCACCGCCAAATGCCAATTCCCGTCGTTTTTCACAGCCAGTTTTGCAATTCAACTATGGCTCAGCAGGAAGATGGATGGCCATTAGGGTTGCGGGTTATGAACGCCAGAGTTGGTGGGGTGGCGGGAAATCATGATATCTCTGCTTCGGTTTCTTTCAATACTTTGCGTACTCATTCTCCTAGTTCCTTCACTGATTCTTCCTCAGATCTTGACACAGAGTCAACTGGATCATTCTACCCTGACAAGAGCATCACGCTAGGGAGTCTCATTGGAGTCTCTAGCATTCTTGAGCTATCACGAAGATCAACAAAAGGAAACAAAGTGGAAATACTCGAAGATAAGAAAAAGTACAAGTCCAAGCCAGGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGTCCTGATGCTGTGAGCTTCAGCAGCTCTCCTTCATTTCAACACTCGCTTGAAGCAGAAAGAAAAGCTACAAGAAATCGCAGGAATCACAATCCGACCCTTTACGGACCCAATGATTACTCACCTGTTCCTGGAGCAAACTATTTGTTTTCCAGTGATCAAGTTGATCCTGTATCTTTTGAACAGGTGGGCGAAGAAGAAAGCAGAAGATCAGATGGAGAACTTGTTCGAAATGATGATAACAGATGCTCAATAGGTGAAGTAAAGATCATATACCCAGATGGAGCTTACTCTGTTTTCAAGTAA

Protein sequence

MSAPPHKTAFPHTSNIHSTCFFHRQMPIPVVFHSQFCNSTMAQQEDGWPLGLRVMNARVGGVAGNHDISASVSFNTLRTHSPSSFTDSSSDLDTESTGSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPDAVSFSSSPSFQHSLEAERKATRNRRNHNPTLYGPNDYSPVPGANYLFSSDQVDPVSFEQVGEEESRRSDGELVRNDDNRCSIGEVKIIYPDGAYSVFK*

Homology

[Close]

BLAST of Chy4G088610 vs. ExPASy TrEMBL
Match: A0A0A0LA63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734280 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 7.2e-99
Identity = 190/199 (95.48%), Postives = 195/199 (97.99%), Query Frame = 0


Query: 38  NSTMAQQEDGWPLGLRVMNARVGGVAGNHDISASVSFNTLRTHSPSSFTDSSSDLDTEST 97
           +STMAQQEDGWPLGLRVMNARVGGVAGNHD+SASVSFNTLRTHSPSSFTDSSSDLDTEST
Sbjct: 4   DSTMAQQEDGWPLGLRVMNARVGGVAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTEST 63

Query: 98  GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPD 157
           GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPD
Sbjct: 64  GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPD 123

Query: 158 AVSFSSSPSFQHSLEAERKATRNRRNHNPTLYGPNDYSPVPGANYLFSSDQVDPVSFEQV 217
           AVSFSSSPS QHSLEAERKATRNRRNHNPTLYGPNDYSPVPGAN LFSSDQVDPVSFEQ 
Sbjct: 124 AVSFSSSPSLQHSLEAERKATRNRRNHNPTLYGPNDYSPVPGANSLFSSDQVDPVSFEQA 183

Query: 218 GEEESRRSDGELVRNDDNR 237
           GEEESRRSDGELVRN +++
Sbjct: 184 GEEESRRSDGELVRNGNSQ 202

[Close]

BLAST of Chy4G088610 vs. ExPASy TrEMBL
Match: A0A1S3B5Y9 (uncharacterized protein LOC103486392 OS=Cucumis melo OX=3656 GN=LOC103486392 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 3.2e-91
Identity = 181/202 (89.60%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 38  NSTMAQQEDGWPLGLRVMNARVGGVAGNHDISASVSFNTLRTHSPSSFTDSSSDLDTEST 97
           +STMA QEDGWPLGLRVMNARVGG+AGNHD+SASVSFNTLRTHSPSSFTDSSSDLDT+ST
Sbjct: 4   DSTMALQEDGWPLGLRVMNARVGGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTKST 63

Query: 98  GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPD 157
           GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKP LFSLSLCIKLRPD
Sbjct: 64  GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPWLFSLSLCIKLRPD 123

Query: 158 AVSFSSSPSFQHSLEAERKATRNRRNHNPTLYGPNDYS---PVPGANYLFSSDQVDPVSF 217
           AVSFSSSPS QHSLEAERKATRNRRNHN TLYGPNDYS   PV GAN LFSSD+VDPVSF
Sbjct: 124 AVSFSSSPSLQHSLEAERKATRNRRNHNSTLYGPNDYSLVPPVSGANSLFSSDRVDPVSF 183

Query: 218 EQVGEEESRRSDGELVRNDDNR 237
            Q GEEESRRSDGELV+N +++
Sbjct: 184 AQAGEEESRRSDGELVQNGNSQ 205

[Close]

BLAST of Chy4G088610 vs. ExPASy TrEMBL
Match: A0A5A7TPR1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001720 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 7.9e-90
Identity = 179/199 (89.95%), Postives = 187/199 (93.97%), Query Frame = 0


Query: 41  MAQQEDGWPLGLRVMNARVGGVAGNHDISASVSFNTLRTHSPSSFTDSSSDLDTESTGSF 100
           MA QEDGWPLGLRVMNARVGG+AGNHD+SASVSFNTLRTHSPSSFTDSSSDLDT+STGSF
Sbjct: 1   MALQEDGWPLGLRVMNARVGGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTKSTGSF 60

Query: 101 YPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPDAVS 160
           YPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKP LFSLSLCIKLRPDAVS
Sbjct: 61  YPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPWLFSLSLCIKLRPDAVS 120

Query: 161 FSSSPSFQHSLEAERKATRNRRNHNPTLYGPNDYS---PVPGANYLFSSDQVDPVSFEQV 220
           FSSSPS QHSLEAERKATRNRRNHN TLYGPNDYS   PV GAN LFSSD+VDPVSF Q 
Sbjct: 121 FSSSPSLQHSLEAERKATRNRRNHNSTLYGPNDYSLVPPVSGANSLFSSDRVDPVSFAQA 180

Query: 221 GEEESRRSDGELVRNDDNR 237
           GEEESRRSDGELV+N +++
Sbjct: 181 GEEESRRSDGELVQNGNSQ 199

[Close]

BLAST of Chy4G088610 vs. ExPASy TrEMBL
Match: A0A6J1F3R7 (uncharacterized protein At3g17950-like OS=Cucurbita moschata OX=3662 GN=LOC111441894 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 5.2e-73
Identity = 160/204 (78.43%), Postives = 171/204 (83.82%), Query Frame = 0


Query: 38  NSTMAQQEDGWPLGLRVMNARVGGVAGNHDISASVSFNTLRTHSPSSFTDSSSDLDTEST 97
           +STMAQQEDGWPLGLR+MN RV G+A NHD+SASVSFNTLRTHSPSSFTDSSSDLDTEST
Sbjct: 4   DSTMAQQEDGWPLGLRLMNTRV-GLARNHDLSASVSFNTLRTHSPSSFTDSSSDLDTEST 63

Query: 98  GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPD 157
           GSFY DKSITLGSLIGVSS+LELSRRSTKGN+VEIL+DKKKYKSKP LFSLSLCIKLRPD
Sbjct: 64  GSFYHDKSITLGSLIGVSSLLELSRRSTKGNRVEILKDKKKYKSKPWLFSLSLCIKLRPD 123

Query: 158 AVSFSSSPSFQHSLEAERKATRNRRNHNPTLYGPNDYS---PVPGANYLFSSDQVDPVS- 217
           AVS SSSPS +HSLEAER+A      HNPT+YGPNDYS   PV G N LFSSDQV PV  
Sbjct: 124 AVSLSSSPSLEHSLEAERRA------HNPTMYGPNDYSPVRPVSGTNSLFSSDQVAPVQP 183

Query: 218 FEQVGEEESRRSDGELVRNDDNRC 238
           F     EESRRS GEL   +D  C
Sbjct: 184 FAPAVTEESRRSIGELA--EDGYC 198

[Close]

BLAST of Chy4G088610 vs. ExPASy TrEMBL
Match: A0A6J1CUV3 (uncharacterized protein LOC111014995 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014995 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 6.7e-73
Identity = 155/192 (80.73%), Postives = 166/192 (86.46%), Query Frame = 0


Query: 41  MAQQEDGWPLGLRVMNARVGGVAGNHDISASVSFNTLRTHSPSSFTDSSSDLDTESTGSF 100
           MAQQEDGWPLGLR+MNARV G+AGN D+SASVSFNTLRTHSPSSFTDSSSDLDTESTGSF
Sbjct: 1   MAQQEDGWPLGLRLMNARV-GLAGNRDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSF 60

Query: 101 YPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPDAVS 160
           Y DKSITLGSLIGVSSILELSRRSTKGNKVE LEDKKK KSKP LFSLSLCIKLRPDAVS
Sbjct: 61  YHDKSITLGSLIGVSSILELSRRSTKGNKVETLEDKKKDKSKPWLFSLSLCIKLRPDAVS 120

Query: 161 FSSSPSFQHSLEAERKATRNRRNHNPTLYGPNDYS---PVPGANYLFSSDQVDPVSFEQV 220
             SSPS +HSL AER ATRN R  NPT+YGPND+S   PV G N LF+ DQV P+SF  V
Sbjct: 121 LRSSPSLEHSLAAERIATRNHRIQNPTMYGPNDFSPIRPVSGTNSLFAGDQVAPISFAPV 180

Query: 221 GEEESRRSDGEL 230
            EE +R+S+GEL
Sbjct: 181 VEEGARKSNGEL 191

[Close]

BLAST of Chy4G088610 vs. NCBI nr
Match: XP_011651900.1 (uncharacterized protein LOC101206844 [Cucumis sativus] >KGN58875.1 hypothetical protein Csa_001533 [Cucumis sativus])

HSP 1 Score: 367 bits (942), Expect = 2.84e-126
Identity = 190/195 (97.44%), Postives = 192/195 (98.46%), Query Frame = 0


Query: 38  NSTMAQQEDGWPLGLRVMNARVGGVAGNHDISASVSFNTLRTHSPSSFTDSSSDLDTEST 97
           +STMAQQEDGWPLGLRVMNARVGGVAGNHD+SASVSFNTLRTHSPSSFTDSSSDLDTEST
Sbjct: 4   DSTMAQQEDGWPLGLRVMNARVGGVAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTEST 63

Query: 98  GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPD 157
           GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPD
Sbjct: 64  GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPD 123

Query: 158 AVSFSSSPSFQHSLEAERKATRNRRNHNPTLYGPNDYSPVPGANYLFSSDQVDPVSFEQV 217
           AVSFSSSPS QHSLEAERKATRNRRNHNPTLYGPNDYSPVPGAN LFSSDQVDPVSFEQ 
Sbjct: 124 AVSFSSSPSLQHSLEAERKATRNRRNHNPTLYGPNDYSPVPGANSLFSSDQVDPVSFEQA 183

Query: 218 GEEESRRSDGELVRN 232
           GEEESRRSDGELVRN
Sbjct: 184 GEEESRRSDGELVRN 198

[Close]

BLAST of Chy4G088610 vs. NCBI nr
Match: XP_008442557.1 (PREDICTED: uncharacterized protein LOC103486392 [Cucumis melo])

HSP 1 Score: 342 bits (876), Expect = 3.52e-116
Identity = 181/198 (91.41%), Postives = 187/198 (94.44%), Query Frame = 0


Query: 38  NSTMAQQEDGWPLGLRVMNARVGGVAGNHDISASVSFNTLRTHSPSSFTDSSSDLDTEST 97
           +STMA QEDGWPLGLRVMNARVGG+AGNHD+SASVSFNTLRTHSPSSFTDSSSDLDT+ST
Sbjct: 4   DSTMALQEDGWPLGLRVMNARVGGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTKST 63

Query: 98  GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPD 157
           GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKP LFSLSLCIKLRPD
Sbjct: 64  GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPWLFSLSLCIKLRPD 123

Query: 158 AVSFSSSPSFQHSLEAERKATRNRRNHNPTLYGPNDYS---PVPGANYLFSSDQVDPVSF 217
           AVSFSSSPS QHSLEAERKATRNRRNHN TLYGPNDYS   PV GAN LFSSD+VDPVSF
Sbjct: 124 AVSFSSSPSLQHSLEAERKATRNRRNHNSTLYGPNDYSLVPPVSGANSLFSSDRVDPVSF 183

Query: 218 EQVGEEESRRSDGELVRN 232
            Q GEEESRRSDGELV+N
Sbjct: 184 AQAGEEESRRSDGELVQN 201

[Close]

BLAST of Chy4G088610 vs. NCBI nr
Match: KAA0044086.1 (uncharacterized protein E6C27_scaffold236G004360 [Cucumis melo var. makuwa] >TYK25051.1 uncharacterized protein E5676_scaffold352G001720 [Cucumis melo var. makuwa])

HSP 1 Score: 338 bits (866), Expect = 9.50e-115
Identity = 179/195 (91.79%), Postives = 184/195 (94.36%), Query Frame = 0


Query: 41  MAQQEDGWPLGLRVMNARVGGVAGNHDISASVSFNTLRTHSPSSFTDSSSDLDTESTGSF 100
           MA QEDGWPLGLRVMNARVGG+AGNHD+SASVSFNTLRTHSPSSFTDSSSDLDT+STGSF
Sbjct: 1   MALQEDGWPLGLRVMNARVGGLAGNHDLSASVSFNTLRTHSPSSFTDSSSDLDTKSTGSF 60

Query: 101 YPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPDAVS 160
           YPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKP LFSLSLCIKLRPDAVS
Sbjct: 61  YPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPWLFSLSLCIKLRPDAVS 120

Query: 161 FSSSPSFQHSLEAERKATRNRRNHNPTLYGPNDYS---PVPGANYLFSSDQVDPVSFEQV 220
           FSSSPS QHSLEAERKATRNRRNHN TLYGPNDYS   PV GAN LFSSD+VDPVSF Q 
Sbjct: 121 FSSSPSLQHSLEAERKATRNRRNHNSTLYGPNDYSLVPPVSGANSLFSSDRVDPVSFAQA 180

Query: 221 GEEESRRSDGELVRN 232
           GEEESRRSDGELV+N
Sbjct: 181 GEEESRRSDGELVQN 195

[Close]

BLAST of Chy4G088610 vs. NCBI nr
Match: XP_038904631.1 (uncharacterized protein LOC120090965 isoform X2 [Benincasa hispida])

HSP 1 Score: 294 bits (753), Expect = 1.12e-97
Identity = 161/197 (81.73%), Postives = 172/197 (87.31%), Query Frame = 0


Query: 38  NSTMAQQEDGWPLGLRVMNARVGGVAGNHDISASVSFNTLRTHSPSSFTDSSSDLDTEST 97
           +STMAQQ+DGWPLGLR+MN R+   A NHD+SASVSFNTLRTHSPSSFTDSSSDLDTEST
Sbjct: 4   DSTMAQQKDGWPLGLRLMNDRM---AENHDLSASVSFNTLRTHSPSSFTDSSSDLDTEST 63

Query: 98  GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPD 157
            SFY DKSITLGSLIGVSSI ELS+RST+GNKVEILEDKKKYKSKP LFSLSLCIKLRPD
Sbjct: 64  ASFYHDKSITLGSLIGVSSIFELSQRSTEGNKVEILEDKKKYKSKPWLFSLSLCIKLRPD 123

Query: 158 AVSFSSSPSFQHSLEAERKATRNRRNHNPTLYGPNDYSP---VPGANYLFSSDQVDPVSF 217
           AVS SSSPS +HSLEAERK TRN R HNPTLYGPNDYSP   V   N LFSS+QV PVSF
Sbjct: 124 AVSLSSSPSLEHSLEAERKTTRNHRIHNPTLYGPNDYSPIRPVSETNALFSSEQVAPVSF 183

Query: 218 EQVGEEESRRSDGELVR 231
              G+EESRRSDGELV+
Sbjct: 184 ALAGKEESRRSDGELVQ 197

[Close]

BLAST of Chy4G088610 vs. NCBI nr
Match: XP_038904630.1 (uncharacterized protein LOC120090965 isoform X1 [Benincasa hispida])

HSP 1 Score: 294 bits (753), Expect = 2.46e-97
Identity = 161/197 (81.73%), Postives = 172/197 (87.31%), Query Frame = 0


Query: 38  NSTMAQQEDGWPLGLRVMNARVGGVAGNHDISASVSFNTLRTHSPSSFTDSSSDLDTEST 97
           +STMAQQ+DGWPLGLR+MN R+   A NHD+SASVSFNTLRTHSPSSFTDSSSDLDTEST
Sbjct: 4   DSTMAQQKDGWPLGLRLMNDRM---AENHDLSASVSFNTLRTHSPSSFTDSSSDLDTEST 63

Query: 98  GSFYPDKSITLGSLIGVSSILELSRRSTKGNKVEILEDKKKYKSKPGLFSLSLCIKLRPD 157
            SFY DKSITLGSLIGVSSI ELS+RST+GNKVEILEDKKKYKSKP LFSLSLCIKLRPD
Sbjct: 64  ASFYHDKSITLGSLIGVSSIFELSQRSTEGNKVEILEDKKKYKSKPWLFSLSLCIKLRPD 123

Query: 158 AVSFSSSPSFQHSLEAERKATRNRRNHNPTLYGPNDYSP---VPGANYLFSSDQVDPVSF 217
           AVS SSSPS +HSLEAERK TRN R HNPTLYGPNDYSP   V   N LFSS+QV PVSF
Sbjct: 124 AVSLSSSPSLEHSLEAERKTTRNHRIHNPTLYGPNDYSPIRPVSETNALFSSEQVAPVSF 183

Query: 218 EQVGEEESRRSDGELVR 231
              G+EESRRSDGELV+
Sbjct: 184 ALAGKEESRRSDGELVQ 197

[Close]

BLAST of Chy4G088610 vs. TAIR 10
Match: AT5G02440.1 (unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 3.8e-20
Identity = 74/175 (42.29%), Postives = 102/175 (58.29%), Query Frame = 0


Query: 41  MAQQEDGWPLGLRVMNARVGGVA-GNH------DISA-SVSFNTLRTHSPSSFTDSSSDL 100
           MA QE+GWPLGLR +NAR+GG+  G H       +SA S+SF++L + SPSS   SSSDL
Sbjct: 1   MAHQEEGWPLGLRPVNARIGGLTRGTHHHHHHEQVSAGSISFSSLLSPSPSS--QSSSDL 60

Query: 101 DTESTGSFYPDKSITLGSLIGVSSILELSRRS--TKGNKVEILEDKKKYKS-----KPGL 160
           D++S GSF+ D+S TLG+LIG+SS LELSRRS  T+ ++     + + +K+     KP +
Sbjct: 61  DSQSMGSFFRDRSYTLGNLIGISSFLELSRRSNRTRNDQTGAARNHQHHKNLKTYYKPWI 120

Query: 161 FSLSLCIKLRPDAVSFSSS-------------PSFQHSLEAERKATRNRRNHNPT 188
           F  S+C KL  +A   S +              S  H L  ER+A  +     PT
Sbjct: 121 F--SICSKLSTNATVISHNRIINEENDGRNNVQSLGHFLIMERRAVGSTIRSTPT 171

[Close]

BLAST of Chy4G088610 vs. TAIR 10
Match: AT3G17950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 1.0e-04
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0


Query: 81  SPSSFTDSSSDLDTESTGSFYPDKSITLGSLIGVS 116
           SP+  + SSSDLDTESTGSF+ D+SITLG+L+G S
Sbjct: 9   SPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFS 43

The following BLAST results are available for this feature:

BLAST of Chy4G088610 vs.


Match Name	E-value	Identity	Description

BLAST of Chy4G088610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA63	7.2e-99	95.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734280 PE=4 SV=1	[more]
A0A1S3B5Y9	3.2e-91	89.60	uncharacterized protein LOC103486392 OS=Cucumis melo OX=3656 GN=LOC103486392 PE=...	[more]
A0A5A7TPR1	7.9e-90	89.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1F3R7	5.2e-73	78.43	uncharacterized protein At3g17950-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1CUV3	6.7e-73	80.73	uncharacterized protein LOC111014995 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Chy4G088610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651900.1	2.84e-126	97.44	uncharacterized protein LOC101206844 [Cucumis sativus] >KGN58875.1 hypothetical ...	[more]
XP_008442557.1	3.52e-116	91.41	PREDICTED: uncharacterized protein LOC103486392 [Cucumis melo]	[more]
KAA0044086.1	9.50e-115	91.79	uncharacterized protein E6C27_scaffold236G004360 [Cucumis melo var. makuwa] >TYK...	[more]
XP_038904631.1	1.12e-97	81.73	uncharacterized protein LOC120090965 isoform X2 [Benincasa hispida]	[more]
XP_038904630.1	2.46e-97	81.73	uncharacterized protein LOC120090965 isoform X1 [Benincasa hispida]	[more]

BLAST of Chy4G088610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02440.1	3.8e-20	42.29	unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bac...	[more]
AT3G17950.1	1.0e-04	68.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..192
None	No IPR available	PANTHER	PTHR33544:SF3	60S RIBOSOMAL PROTEIN L36	coord: 41..231
IPR040344	Uncharacterized protein At3g17950-like	PANTHER	PTHR33544	FAMILY NOT NAMED	coord: 41..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G088610.1	Chy4G088610.1	mRNA