Chy4G087840 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCAAGGAGAGGCGGTTTAGGATTCGGCTTCGGTTTTCACTCCAAACCTAACTACATCTATCCGGCGTCTGACTCACTTCGCTGTTCTGAATCATCGACCGATAATAACCTCTTTGAATTCGACGAATCGGATATTTGGACATCCGCTACTACTACTGCTCCAACTCCCCCGATGGAATCGAGAAAGATCTTTCCGATCTCGAAGAAACTTCCCAAGAGGAGTGGCTCTGCTGCCACAGCGGTGGACAAGGCGGTGAAGGAGTCTTCGTCATTGCCGGTCAACATTCCTGATTGGTCGAAGATTCTGCAGAAGGATCAGAACAAGCACGGGCGGAGAGCGGTGGCGGAGGAGGATTTTGATGATAGTGACGACGGGGATGACGACGACATTCGACGGGCACCGCCGCATGAGTATTTGGCCAGACGGCGAGGTGATTCGTTTTCGGTTCACGAAGGGATCGGAAGAACGCTGAAGGGAAGGGATTTGAGAATGGTGAGAAATGCAATTTGGAAAAAAACTGGGTTCGAAGATTAATATTAAATAATTTTTAGCTAGCCGCAAAAAAGAAAAAATTACCTTATAATCATCACCGGAAATCATACTTAGAATAATGATTAGAGAATTTTGATGAAGTAAATTAATGTAATTTCCCCTAAATTTTCTCCCTTTTCTTCTCTCTCTTTTTGATTCAAAATGTTATTGTGATCGTTATCTGTATCAGAAACAGTGA ATGGCGTCAAGGAGAGGCGGTTTAGGATTCGGCTTCGGTTTTCACTCCAAACCTAACTACATCTATCCGGCGTCTGACTCACTTCGCTGTTCTGAATCATCGACCGATAATAACCTCTTTGAATTCGACGAATCGGATATTTGGACATCCGCTACTACTACTGCTCCAACTCCCCCGATGGAATCGAGAAAGATCTTTCCGATCTCGAAGAAACTTCCCAAGAGGAGTGGCTCTGCTGCCACAGCGGTGGACAAGGCGGTGAAGGAGTCTTCGTCATTGCCGGTCAACATTCCTGATTGGTCGAAGATTCTGCAGAAGGATCAGAACAAGCACGGGCGGAGAGCGGTGGCGGAGGAGGATTTTGATGATAGTGACGACGGGGATGACGACGACATTCGACGGGCACCGCCGCATGAGTATTTGGCCAGACGGCGAGGTGATTCGTTTTCGGTTCACGAAGGGATCGGAAGAACGCTGAAGGGAAGGGATTTGAGAATGAAACAGTGA ATGGCGTCAAGGAGAGGCGGTTTAGGATTCGGCTTCGGTTTTCACTCCAAACCTAACTACATCTATCCGGCGTCTGACTCACTTCGCTGTTCTGAATCATCGACCGATAATAACCTCTTTGAATTCGACGAATCGGATATTTGGACATCCGCTACTACTACTGCTCCAACTCCCCCGATGGAATCGAGAAAGATCTTTCCGATCTCGAAGAAACTTCCCAAGAGGAGTGGCTCTGCTGCCACAGCGGTGGACAAGGCGGTGAAGGAGTCTTCGTCATTGCCGGTCAACATTCCTGATTGGTCGAAGATTCTGCAGAAGGATCAGAACAAGCACGGGCGGAGAGCGGTGGCGGAGGAGGATTTTGATGATAGTGACGACGGGGATGACGACGACATTCGACGGGCACCGCCGCATGAGTATTTGGCCAGACGGCGAGGTGATTCGTTTTCGGTTCACGAAGGGATCGGAAGAACGCTGAAGGGAAGGGATTTGAGAATGAAACAGTGA MASRRGGLGFGFGFHSKPNYIYPASDSLRCSESSTDNNLFEFDESDIWTSATTTAPTPPMESRKIFPISKKLPKRSGSAATAVDKAVKESSSLPVNIPDWSKILQKDQNKHGRRAVAEEDFDDSDDGDDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMKQ* Homology
BLAST of Chy4G087840 vs. ExPASy TrEMBL
Match: A0A0A0LDH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G739050 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 2.7e-86 Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0
BLAST of Chy4G087840 vs. ExPASy TrEMBL
Match: A0A5A7TR07 (Senescence regulator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002540 PE=4 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 7.6e-81 Identity = 157/166 (94.58%), Postives = 161/166 (96.99%), Query Frame = 0
BLAST of Chy4G087840 vs. ExPASy TrEMBL
Match: A0A1S3B5S2 (uncharacterized protein LOC103486480 OS=Cucumis melo OX=3656 GN=LOC103486480 PE=4 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 7.6e-81 Identity = 157/166 (94.58%), Postives = 161/166 (96.99%), Query Frame = 0
BLAST of Chy4G087840 vs. ExPASy TrEMBL
Match: A0A6J1L0M7 (uncharacterized protein LOC111498772 OS=Cucurbita maxima OX=3661 GN=LOC111498772 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 8.2e-59 Identity = 131/168 (77.98%), Postives = 143/168 (85.12%), Query Frame = 0
BLAST of Chy4G087840 vs. ExPASy TrEMBL
Match: A0A6J1F414 (uncharacterized protein LOC111441967 OS=Cucurbita moschata OX=3662 GN=LOC111441967 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 8.2e-59 Identity = 128/167 (76.65%), Postives = 144/167 (86.23%), Query Frame = 0
BLAST of Chy4G087840 vs. NCBI nr
Match: XP_004137823.1 (uncharacterized protein LOC101217342 [Cucumis sativus] >KGN58959.1 hypothetical protein Csa_001927 [Cucumis sativus]) HSP 1 Score: 329 bits (843), Expect = 2.81e-113 Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0
BLAST of Chy4G087840 vs. NCBI nr
Match: XP_008442681.1 (PREDICTED: uncharacterized protein LOC103486480 [Cucumis melo] >KAA0044011.1 Senescence regulator [Cucumis melo var. makuwa] >TYK25129.1 Senescence regulator [Cucumis melo var. makuwa]) HSP 1 Score: 310 bits (795), Expect = 5.64e-106 Identity = 157/166 (94.58%), Postives = 161/166 (96.99%), Query Frame = 0
BLAST of Chy4G087840 vs. NCBI nr
Match: XP_038905106.1 (uncharacterized protein LOC120091239 [Benincasa hispida]) HSP 1 Score: 270 bits (690), Expect = 4.46e-90 Identity = 145/166 (87.35%), Postives = 149/166 (89.76%), Query Frame = 0
BLAST of Chy4G087840 vs. NCBI nr
Match: XP_023539980.1 (uncharacterized protein LOC111800495 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 241 bits (614), Expect = 1.68e-78 Identity = 132/168 (78.57%), Postives = 144/168 (85.71%), Query Frame = 0
BLAST of Chy4G087840 vs. NCBI nr
Match: KAG7028018.1 (hypothetical protein SDJN02_09198, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 240 bits (612), Expect = 3.39e-78 Identity = 132/168 (78.57%), Postives = 144/168 (85.71%), Query Frame = 0
BLAST of Chy4G087840 vs. TAIR 10
Match: AT5G03230.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 115.5 bits (288), Expect = 4.0e-26 Identity = 71/158 (44.94%), Postives = 94/158 (59.49%), Query Frame = 0
BLAST of Chy4G087840 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 99.0 bits (245), Expect = 3.9e-21 Identity = 62/154 (40.26%), Postives = 93/154 (60.39%), Query Frame = 0
BLAST of Chy4G087840 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 82.8 bits (203), Expect = 2.9e-16 Identity = 57/151 (37.75%), Postives = 88/151 (58.28%), Query Frame = 0
BLAST of Chy4G087840 vs. TAIR 10
Match: AT2G28400.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 82.4 bits (202), Expect = 3.8e-16 Identity = 62/154 (40.26%), Postives = 80/154 (51.95%), Query Frame = 0
BLAST of Chy4G087840 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-11 Identity = 46/131 (35.11%), Postives = 68/131 (51.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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