Chy4G083860 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G083860
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH04: 23081948 .. 23082976 (-)
RNA-Seq Expression	Chy4G083860
Synteny	Chy4G083860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGCCTTGAATTCCCAATGACAACATTTGCTTACAACCACATGCTTGTTCTTTACAAGAAGATTAACAGGAGGAAGATAGCCGACGTTTTGTTGTTGATGGAGAAAGAAAATATCAAGCCTGCTCCGTTTACTTACAAAATCTTAATTGATGGTAAAGGCCTTTCTAATGACATAAGTGGGATGGAACAAGTTGTTGATTCAATGAAGGCTGAAGGAATTGAGCTTGATGTTTCTACACTTTCTCTATTAGCTAAGCACTATGTTTCAGTTGGGCTTAAAGTCAAAGCCAAGGACATTTTAAAGGAGATTGAAGAAACTAACTCCAAAGGTCCTCAATTGTCACGCAGAATTTTACTTCCTTTTTATGGACAACTCCAAATGGAAGATGAAGTGAGGAGGCTCTGGGAGATCTGTGAGGCAAATCCTCATATTGAAGAATGTATGGCTGCCATTGTTGCTTGGGGACAGCTGAAGAACGTCCAGGAAGCAGAGAAATTTTTTGATAGAGTTGTAAAAACGTGGAAGAAGCTATCCGCAAGACACTATTCTATCATGATGAACGTTTATAGAGACAGTAAGATGCTGACGAAGGGCAAGGAACTAGTCAATCAGATGGCAGAGAGCGGTTGCCACATCGATCTGTGGACATGCAATGCAATTGTGAAGCTCTATGTGGAAGCAGGGGAGGTAGAAAAGGCAGACTCTTTCTTGGTTAAGGCAGTTAAAAAATACGGGAGGAAGCCATTGTTTACATCATACAAGACTCTCATGGATCACTACGCAAGGAGGGGTGATGTTCACAATGCAGAGAAAATCTTTGATAAGATGAGACAATCGGGTTACATGCCTCGTCTCGGGTAATTTGGAACTCTAATACAAGCATATGTTAACGCCAAGACTCCGGCATATGGTATGAGAGAGAGAATGATGGCAGATAAGGTTTTTCCAAGCAAAGCTTTGGCAGGACAATTAGCTCAAGTTGATTCTTTTAGGAAGACAGCAGTGTCAGATTTGCTTGATTGA

mRNA sequence

ATGAAGGGCCTTGAATTCCCAATGACAACATTTGCTTACAACCACATGCTTGTTCTTTACAAGAAGATTAACAGGAGGAAGATAGCCGACGTTTTGTTGTTGATGGAGAAAGAAAATATCAAGCCTGCTCCGTTTACTTACAAAATCTTAATTGATGGTAAAGGCCTTTCTAATGACATAAGTGGGATGGAACAAGTTGTTGATTCAATGAAGGCTGAAGGAATTGAGCTTGATGTTTCTACACTTTCTCTATTAGCTAAGCACTATGTTTCAGTTGGGCTTAAAGTCAAAGCCAAGGACATTTTAAAGGAGATTGAAGAAACTAACTCCAAAGGTCCTCAATTGTCACGCAGAATTTTACTTCCTTTTTATGGACAACTCCAAATGGAAGATGAAGTGAGGAGGCTCTGGGAGATCTGTGAGGCAAATCCTCATATTGAAGAATGTATGGCTGCCATTGTTGCTTGGGGACAGCTGAAGAACGTCCAGGAAGCAGAGAAATTTTTTGATAGAGTTGTAAAAACGTGGAAGAAGCTATCCGCAAGACACTATTCTATCATGATGAACGTTTATAGAGACAGTAAGATGCTGACGAAGGGCAAGGAACTAGTCAATCAGATGGCAGAGAGCGGTTGCCACATCGATCTGTGGACATGCAATGCAATTGTGAAGCTCTATGTGGAAGCAGGGGAGACTCCGGCATATGGTATGAGAGAGAGAATGATGGCAGATAAGGTTTTTCCAAGCAAAGCTTTGGCAGGACAATTAGCTCAAGTTGATTCTTTTAGGAAGACAGCAGTGTCAGATTTGCTTGATTGA

Coding sequence (CDS)

ATGAAGGGCCTTGAATTCCCAATGACAACATTTGCTTACAACCACATGCTTGTTCTTTACAAGAAGATTAACAGGAGGAAGATAGCCGACGTTTTGTTGTTGATGGAGAAAGAAAATATCAAGCCTGCTCCGTTTACTTACAAAATCTTAATTGATGGTAAAGGCCTTTCTAATGACATAAGTGGGATGGAACAAGTTGTTGATTCAATGAAGGCTGAAGGAATTGAGCTTGATGTTTCTACACTTTCTCTATTAGCTAAGCACTATGTTTCAGTTGGGCTTAAAGTCAAAGCCAAGGACATTTTAAAGGAGATTGAAGAAACTAACTCCAAAGGTCCTCAATTGTCACGCAGAATTTTACTTCCTTTTTATGGACAACTCCAAATGGAAGATGAAGTGAGGAGGCTCTGGGAGATCTGTGAGGCAAATCCTCATATTGAAGAATGTATGGCTGCCATTGTTGCTTGGGGACAGCTGAAGAACGTCCAGGAAGCAGAGAAATTTTTTGATAGAGTTGTAAAAACGTGGAAGAAGCTATCCGCAAGACACTATTCTATCATGATGAACGTTTATAGAGACAGTAAGATGCTGACGAAGGGCAAGGAACTAGTCAATCAGATGGCAGAGAGCGGTTGCCACATCGATCTGTGGACATGCAATGCAATTGTGAAGCTCTATGTGGAAGCAGGGGAGACTCCGGCATATGGTATGAGAGAGAGAATGATGGCAGATAAGGTTTTTCCAAGCAAAGCTTTGGCAGGACAATTAGCTCAAGTTGATTCTTTTAGGAAGACAGCAGTGTCAGATTTGCTTGATTGA

Protein sequence

MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDISGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRILLPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLSARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGETPAYGMRERMMADKVFPSKALAGQLAQVDSFRKTAVSDLLD*

Homology

[Close]

BLAST of Chy4G083860 vs. ExPASy Swiss-Prot
Match: Q9C977 (Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80270 PE=2 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.5e-75
Identity = 153/342 (44.74%), Postives = 212/342 (61.99%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK L FP++ F  + ML+L+K+I+R+KIADVLLLMEKENIKP+  TYKILID KG +NDI
Sbjct: 255 MKDLGFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDI 314

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           SGMEQ++++MK EG+ELD  T +L A+HY   GLK KA+ +LKE+E  + +  + + + L
Sbjct: 315 SGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDL 374

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           L  Y  L  EDEV+R+W+ICE+ P+ EE +AAI A+G+L  VQEAE  F+++VK  ++ S
Sbjct: 375 LSIYASLGREDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRAS 434

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
           +  YS+++ VY D KML+KGK+LV +MAESGC I+  T +A++KLYVEAGE         
Sbjct: 435 SSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLD 494

Query: 241 ------------------------------------------------------------ 273
                                                                       
Sbjct: 495 KASKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQAYINA 554

[Close]

BLAST of Chy4G083860 vs. ExPASy Swiss-Prot
Match: Q9XI21 (Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g15480 PE=2 SV=2)

HSP 1 Score: 282.0 bits (720), Expect = 7.4e-75
Identity = 151/342 (44.15%), Postives = 212/342 (61.99%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK L FP++TF  N ML+LYK+++++KIADVLLL+EKEN+KP   TYKILID KG SNDI
Sbjct: 253 MKDLGFPLSTFTCNQMLILYKRVDKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDI 312

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           +GMEQ+V++MK+EG+ELD+   +L+A+HY S GLK KA+ +LKE+E  + +  +   + L
Sbjct: 313 TGMEQIVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDL 372

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           L  YG LQ EDEVRR+W+ICE NP   E +AAI+A+G++  V++AE  F++V+K   ++S
Sbjct: 373 LSVYGYLQREDEVRRVWKICEENPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVS 432

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
           +  YS+++ VY D KM+++GK+LV QM++SGC+I   T +A++KLYVEAGE         
Sbjct: 433 SNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLS 492

Query: 241 ------------------------------------------------------------ 273
                                                                       
Sbjct: 493 KAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNA 552

[Close]

BLAST of Chy4G083860 vs. ExPASy Swiss-Prot
Match: Q9LRP6 (Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g15590 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 5.5e-62
Identity = 138/342 (40.35%), Postives = 191/342 (55.85%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK L+FP + FA N +L+LY   +R+KI+DVLLLME+ENIKP+  TY  LI+ KGL+ DI
Sbjct: 268 MKELKFPTSVFACNQLLLLYSMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDI 327

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           +GME++V+++K EGIELD    S+LAK+Y+  GLK +A+D++KEIE    +      R L
Sbjct: 328 TGMEKIVETIKEEGIELDPELQSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSL 387

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           LP Y  +   D VRRL    + NP  + C++AI AWG+LK V+EAE  F+R+V+ +K   
Sbjct: 388 LPLYADIGDSDNVRRLSRFVDQNPRYDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFP 447

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
              Y  +M +Y ++KML KG++LV +M  +G  I   T +A+VKLY++AGE         
Sbjct: 448 MMPYFALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYIKAGEVGKAELILN 507

Query: 241 ------------------------------------------------------------ 273
                                                                       
Sbjct: 508 RATKDNKMRPMFTTYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQYETVLLAYINA 567

[Close]

BLAST of Chy4G083860 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.3e-18
Identity = 62/236 (26.27%), Postives = 112/236 (47.46%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINR-RKIADVLLLMEKENIKPAPFTYKILIDGKGLSND 60
           MK L    ++ +YN ++ LY K     K+  ++  ++ EN+ P  +TY + +     +ND
Sbjct: 149 MKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATND 208

Query: 61  ISGMEQVVDSMKAEG-IELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRR 120
           ISG+E+V++ M  +G +  D +T S +A  YV  GL  KA+  L+E+E  N++    + +
Sbjct: 209 ISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQ 268

Query: 121 ILLPFYGQLQMEDEVRRLWEICE-ANPHIEEC--MAAIVAWGQLKNVQEAEKFFDRVVKT 180
            L+  YG+L    EV R+W     A P       +  I    +L ++  AE  F      
Sbjct: 269 FLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQAN 328

Query: 181 WKKLSARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE 232
                 R  ++++  Y    ++ K  EL  +    G  ++  T    +  YV++G+
Sbjct: 329 CSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGD 384

[Close]

BLAST of Chy4G083860 vs. ExPASy Swiss-Prot
Match: Q9FZ24 (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g02370 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.4e-12
Identity = 54/210 (25.71%), Postives = 98/210 (46.67%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLL-LMEKENIKPAPFTYKILIDGKGLSND 60
           M  L F   +  +N+M+ +Y ++++ +   VL+  M++  I P   TY I +   G  ND
Sbjct: 198 MDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLND 257

Query: 61  ISGMEQVVDSM-KAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRR 120
           + G+E+++D M K    +   +T S LA  Y   GL  KA   LK +EE  +   + S  
Sbjct: 258 LDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNNRDSHH 317

Query: 121 ILLPFYGQLQMEDEVRRLWE-ICEANPHIEEC--MAAIVAWGQLKNVQEAEKFFDRVVKT 180
            L+  Y  +    EV R+WE + +A P +     +  + A  +L ++   +K F      
Sbjct: 318 FLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESK 377

Query: 181 WKKLSARHYSIMMNVYRDSKMLTKGKELVN 206
                 R  +I +N Y    M  + +++++
Sbjct: 378 CWAYDMRLANIAINTYLKGNMYEEAEKILD 407

[Close]

BLAST of Chy4G083860 vs. ExPASy TrEMBL
Match: A0A0A0LCB7 (PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819900 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.6e-128
Identity = 253/342 (73.98%), Postives = 259/342 (75.73%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           +K LEFPM+ FAYN MLVLYKKI+RRKIADVLLLMEKENIKP PFTYKILIDGKGLSNDI
Sbjct: 269 IKDLEFPMSIFAYNQMLVLYKKIDRRKIADVLLLMEKENIKPCPFTYKILIDGKGLSNDI 328

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           SGMEQVVDSMKAEGIELDVSTLSLLAKHYVS GLKVKAK ILKEIEETNS GPQ   RIL
Sbjct: 329 SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSCGLKVKAKAILKEIEETNSNGPQWLCRIL 388

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           LPFYG+LQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEK FDRVVKTWKKLS
Sbjct: 389 LPFYGKLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKIFDRVVKTWKKLS 448

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
           ARHYSIMMNVYRDSKMLTKGKE+VNQMAESGCHIDL TCNAIVKLYVEAGE         
Sbjct: 449 ARHYSIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNAIVKLYVEAGEVEKADSFLV 508

Query: 241 ------------------------------------------------------------ 273
                                                                       
Sbjct: 509 KAVKKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDKMRQSSYIPRLGQFGTLIQAYVNA 568

[Close]

BLAST of Chy4G083860 vs. ExPASy TrEMBL
Match: A0A5D3DPU7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006650 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 5.6e-110
Identity = 217/342 (63.45%), Postives = 245/342 (71.64%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK LEFPMT + YN ML+LYK+I++RKIADVLLLMEKEN+KP+PFTYKILID KGLSNDI
Sbjct: 267 MKDLEFPMTPYPYNQMLILYKRIDKRKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDI 326

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           SGMEQVVDSMKA+GIE+DV TLSLLAKHYVS GLK KAK ILK++EE NSKG +   RIL
Sbjct: 327 SGMEQVVDSMKADGIEVDVGTLSLLAKHYVSGGLKDKAKAILKDMEEINSKGSRWPCRIL 386

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           LP YG+LQMED+VRR+W+ICE NP IEECMAAI AWG+L+NVQEAEK FDRVVKTWKKLS
Sbjct: 387 LPLYGELQMEDDVRRVWKICEENPRIEECMAAITAWGKLRNVQEAEKVFDRVVKTWKKLS 446

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
            +HYS MMNVY D+KMLTKGKELVNQMAE GC +D +T +A+VKLYVEAGE         
Sbjct: 447 TKHYSTMMNVYGDNKMLTKGKELVNQMAERGCSMDPFTWDAVVKLYVEAGEVEKADSFLV 506

Query: 241 ------------------------------------------------------------ 273
                                                                       
Sbjct: 507 KAAKKFGMKPLFNSYRTLMDHYARRGDVHNAEKIFEKMIQSGYLPRFSQFGTLIQAYVNA 566

[Close]

BLAST of Chy4G083860 vs. ExPASy TrEMBL
Match: A0A5A7UF67 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G002840 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.3e-109
Identity = 217/342 (63.45%), Postives = 243/342 (71.05%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK LEFPMT F YN ML+LYK+I++RKIADVLLLMEKEN+KP+PFTYKILID KGLSNDI
Sbjct: 285 MKDLEFPMTPFPYNQMLILYKRIDKRKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDI 344

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           SGMEQVVDSMKA+GIE+DV TLSLLAKHYVS GLK KAK ILK++EE NSKG +   RIL
Sbjct: 345 SGMEQVVDSMKADGIEVDVGTLSLLAKHYVSGGLKDKAKAILKDMEEINSKGSRWPCRIL 404

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           LP YG+LQMED+VRR+W+ICE NP IEECMAAI AWG+L+NVQEAEK FDRVVKTWKKLS
Sbjct: 405 LPLYGELQMEDDVRRVWKICEENPRIEECMAAITAWGKLRNVQEAEKVFDRVVKTWKKLS 464

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
            RHYS MM VY D+KMLTKGKELVNQMAESGCH+D   C+A+VKLYVEAGE         
Sbjct: 465 TRHYSTMMYVYGDNKMLTKGKELVNQMAESGCHMDPLICDAVVKLYVEAGEVEKADSFLV 524

Query: 241 ------------------------------------------------------------ 273
                                                                       
Sbjct: 525 KAAKKYGMKPLFISYRTLMDHYAKRGDVHNAEKIFDKMIQSGYLPRFSHFGTLIQAYVNA 584

[Close]

BLAST of Chy4G083860 vs. ExPASy TrEMBL
Match: A0A1S3B743 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486883 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.8e-108
Identity = 215/342 (62.87%), Postives = 241/342 (70.47%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK LEFPMTTFAY+ ML+LYK+I+RR+IAD+L LMEKEN+KP PFTYKILID KGLSNDI
Sbjct: 267 MKDLEFPMTTFAYDQMLILYKRIDRRRIADILSLMEKENVKPRPFTYKILIDAKGLSNDI 326

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           SGMEQVVD+MKAEGI+LDV TL LLAKHYV  GLK KA  ILK  EE NSKG +   R L
Sbjct: 327 SGMEQVVDTMKAEGIKLDVDTLLLLAKHYVLGGLKDKAMPILKATEEVNSKGSRWPCRYL 386

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           LP YG+LQMEDEVRRLWEICE NP++EECMAAIVAWG+LKN+QEAEK FDRVVKTWK+LS
Sbjct: 387 LPLYGELQMEDEVRRLWEICEPNPNVEECMAAIVAWGKLKNIQEAEKIFDRVVKTWKRLS 446

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
            +HYS MMNVY D+KMLTKGKELVNQMAE GC +D +T +A+VKLYVEAGE         
Sbjct: 447 TKHYSTMMNVYGDNKMLTKGKELVNQMAERGCSMDPFTWDAVVKLYVEAGEVEKADSFLV 506

Query: 241 ------------------------------------------------------------ 273
                                                                       
Sbjct: 507 KAAKKFGMKPLFNSYRTLMDHYARRGDVHNAEKIFEKMIQSGYLPRFSQFGTLIQAYVNA 566

[Close]

BLAST of Chy4G083860 vs. ExPASy TrEMBL
Match: A0A1S3B8B0 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486882 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.4e-108
Identity = 217/342 (63.45%), Postives = 240/342 (70.18%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK LEFP+T FA N +L+LYK+ +++KIADVLLLMEKEN+KP+PFTYKILID KGLSNDI
Sbjct: 255 MKDLEFPITAFACNQLLLLYKRTDKKKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDI 314

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           SGMEQVVD+MKAEGI+L V TL LLAKHYVS GLK KAK  LKE EE NSKG +   R L
Sbjct: 315 SGMEQVVDTMKAEGIKLGVGTLLLLAKHYVSAGLKDKAKATLKETEEINSKGSRRPCRFL 374

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           LP YG+LQMEDEVRRLWEICE+NPH+EECMAAIVAWG+LKNVQEAEK FDRVVKT KKLS
Sbjct: 375 LPLYGELQMEDEVRRLWEICESNPHVEECMAAIVAWGKLKNVQEAEKIFDRVVKTGKKLS 434

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
            RHYS MMNVYRDSKMLTKGKELVNQMAESGC +D +T +A+VKLYVEAGE         
Sbjct: 435 TRHYSTMMNVYRDSKMLTKGKELVNQMAESGCSMDPFTWDAVVKLYVEAGEVEKADSFLV 494

Query: 241 ------------------------------------------------------------ 273
                                                                       
Sbjct: 495 KAVQQSKKKPLFATYIALMDHYASRGDVPNAERIFDKLRILGYVGRFTQYQTLIQAYVNA 554

[Close]

BLAST of Chy4G083860 vs. NCBI nr
Match: KAE8651173.1 (hypothetical protein Csa_001132 [Cucumis sativus])

HSP 1 Score: 467 bits (1201), Expect = 1.25e-159
Identity = 253/341 (74.19%), Postives = 258/341 (75.66%), Query Frame = 0


Query: 2   KGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDIS 61
           K LEFPM+ FAYN MLVLYKKI+RRKIADVLLLMEKENIKP PFTYKILIDGKGLSNDIS
Sbjct: 264 KDLEFPMSIFAYNQMLVLYKKIDRRKIADVLLLMEKENIKPCPFTYKILIDGKGLSNDIS 323

Query: 62  GMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRILL 121
           GMEQVVDSMKAEGIELDVSTLSLLAKHYVS GLKVKAK ILKEIEETNS GPQ   RILL
Sbjct: 324 GMEQVVDSMKAEGIELDVSTLSLLAKHYVSCGLKVKAKAILKEIEETNSNGPQWLCRILL 383

Query: 122 PFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLSA 181
           PFYG+LQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEK FDRVVKTWKKLSA
Sbjct: 384 PFYGKLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKIFDRVVKTWKKLSA 443

Query: 182 RHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE---------- 241
           RHYSIMMNVYRDSKMLTKGKE+VNQMAESGCHIDL TCNAIVKLYVEAGE          
Sbjct: 444 RHYSIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNAIVKLYVEAGEVEKADSFLVK 503

Query: 242 ------------------------------------------------------------ 272
                                                                       
Sbjct: 504 AVKKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDKMRQSSYIPRLGQFGTLIQAYVNAK 563

[Close]

BLAST of Chy4G083860 vs. NCBI nr
Match: XP_011652182.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial isoform X3 [Cucumis sativus])

HSP 1 Score: 467 bits (1201), Expect = 1.51e-159
Identity = 253/341 (74.19%), Postives = 258/341 (75.66%), Query Frame = 0


Query: 2   KGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDIS 61
           K LEFPM+ FAYN MLVLYKKI+RRKIADVLLLMEKENIKP PFTYKILIDGKGLSNDIS
Sbjct: 270 KDLEFPMSIFAYNQMLVLYKKIDRRKIADVLLLMEKENIKPCPFTYKILIDGKGLSNDIS 329

Query: 62  GMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRILL 121
           GMEQVVDSMKAEGIELDVSTLSLLAKHYVS GLKVKAK ILKEIEETNS GPQ   RILL
Sbjct: 330 GMEQVVDSMKAEGIELDVSTLSLLAKHYVSCGLKVKAKAILKEIEETNSNGPQWLCRILL 389

Query: 122 PFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLSA 181
           PFYG+LQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEK FDRVVKTWKKLSA
Sbjct: 390 PFYGKLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKIFDRVVKTWKKLSA 449

Query: 182 RHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE---------- 241
           RHYSIMMNVYRDSKMLTKGKE+VNQMAESGCHIDL TCNAIVKLYVEAGE          
Sbjct: 450 RHYSIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNAIVKLYVEAGEVEKADSFLVK 509

Query: 242 ------------------------------------------------------------ 272
                                                                       
Sbjct: 510 AVKKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDKMRQSSYIPRLGQFGTLIQAYVNAK 569

[Close]

BLAST of Chy4G083860 vs. NCBI nr
Match: KAA0053891.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25515.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 405 bits (1041), Expect = 2.18e-135
Identity = 217/342 (63.45%), Postives = 245/342 (71.64%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK LEFPMT + YN ML+LYK+I++RKIADVLLLMEKEN+KP+PFTYKILID KGLSNDI
Sbjct: 267 MKDLEFPMTPYPYNQMLILYKRIDKRKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDI 326

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           SGMEQVVDSMKA+GIE+DV TLSLLAKHYVS GLK KAK ILK++EE NSKG +   RIL
Sbjct: 327 SGMEQVVDSMKADGIEVDVGTLSLLAKHYVSGGLKDKAKAILKDMEEINSKGSRWPCRIL 386

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           LP YG+LQMED+VRR+W+ICE NP IEECMAAI AWG+L+NVQEAEK FDRVVKTWKKLS
Sbjct: 387 LPLYGELQMEDDVRRVWKICEENPRIEECMAAITAWGKLRNVQEAEKVFDRVVKTWKKLS 446

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
            +HYS MMNVY D+KMLTKGKELVNQMAE GC +D +T +A+VKLYVEAGE         
Sbjct: 447 TKHYSTMMNVYGDNKMLTKGKELVNQMAERGCSMDPFTWDAVVKLYVEAGEVEKADSFLV 506

Query: 241 ------------------------------------------------------------ 272
                                                                       
Sbjct: 507 KAAKKFGMKPLFNSYRTLMDHYARRGDVHNAEKIFEKMIQSGYLPRFSQFGTLIQAYVNA 566

[Close]

BLAST of Chy4G083860 vs. NCBI nr
Match: KAA0053890.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 404 bits (1038), Expect = 1.06e-134
Identity = 217/342 (63.45%), Postives = 243/342 (71.05%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK LEFPMT F YN ML+LYK+I++RKIADVLLLMEKEN+KP+PFTYKILID KGLSNDI
Sbjct: 285 MKDLEFPMTPFPYNQMLILYKRIDKRKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDI 344

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           SGMEQVVDSMKA+GIE+DV TLSLLAKHYVS GLK KAK ILK++EE NSKG +   RIL
Sbjct: 345 SGMEQVVDSMKADGIEVDVGTLSLLAKHYVSGGLKDKAKAILKDMEEINSKGSRWPCRIL 404

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           LP YG+LQMED+VRR+W+ICE NP IEECMAAI AWG+L+NVQEAEK FDRVVKTWKKLS
Sbjct: 405 LPLYGELQMEDDVRRVWKICEENPRIEECMAAITAWGKLRNVQEAEKVFDRVVKTWKKLS 464

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
            RHYS MM VY D+KMLTKGKELVNQMAESGCH+D   C+A+VKLYVEAGE         
Sbjct: 465 TRHYSTMMYVYGDNKMLTKGKELVNQMAESGCHMDPLICDAVVKLYVEAGEVEKADSFLV 524

Query: 241 ------------------------------------------------------------ 272
                                                                       
Sbjct: 525 KAAKKYGMKPLFISYRTLMDHYAKRGDVHNAEKIFDKMIQSGYLPRFSHFGTLIQAYVNA 584

[Close]

BLAST of Chy4G083860 vs. NCBI nr
Match: XP_008443248.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isoform X1 [Cucumis melo] >XP_016899662.1 PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isoform X2 [Cucumis melo] >KAA0053893.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25513.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 400 bits (1027), Expect = 1.98e-133
Identity = 217/342 (63.45%), Postives = 240/342 (70.18%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK LEFP+T FA N +L+LYK+ +++KIADVLLLMEKEN+KP+PFTYKILID KGLSNDI
Sbjct: 255 MKDLEFPITAFACNQLLLLYKRTDKKKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDI 314

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           SGMEQVVD+MKAEGI+L V TL LLAKHYVS GLK KAK  LKE EE NSKG +   R L
Sbjct: 315 SGMEQVVDTMKAEGIKLGVGTLLLLAKHYVSAGLKDKAKATLKETEEINSKGSRRPCRFL 374

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           LP YG+LQMEDEVRRLWEICE+NPH+EECMAAIVAWG+LKNVQEAEK FDRVVKT KKLS
Sbjct: 375 LPLYGELQMEDEVRRLWEICESNPHVEECMAAIVAWGKLKNVQEAEKIFDRVVKTGKKLS 434

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
            RHYS MMNVYRDSKMLTKGKELVNQMAESGC +D +T +A+VKLYVEAGE         
Sbjct: 435 TRHYSTMMNVYRDSKMLTKGKELVNQMAESGCSMDPFTWDAVVKLYVEAGEVEKADSFLV 494

Query: 241 ------------------------------------------------------------ 272
                                                                       
Sbjct: 495 KAVQQSKKKPLFATYIALMDHYASRGDVPNAERIFDKLRILGYVGRFTQYQTLIQAYVNA 554

[Close]

BLAST of Chy4G083860 vs. TAIR 10
Match: AT1G80270.1 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 283.5 bits (724), Expect = 1.8e-76
Identity = 153/342 (44.74%), Postives = 212/342 (61.99%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK L FP++ F  + ML+L+K+I+R+KIADVLLLMEKENIKP+  TYKILID KG +NDI
Sbjct: 255 MKDLGFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDI 314

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           SGMEQ++++MK EG+ELD  T +L A+HY   GLK KA+ +LKE+E  + +  + + + L
Sbjct: 315 SGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDL 374

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           L  Y  L  EDEV+R+W+ICE+ P+ EE +AAI A+G+L  VQEAE  F+++VK  ++ S
Sbjct: 375 LSIYASLGREDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRAS 434

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
           +  YS+++ VY D KML+KGK+LV +MAESGC I+  T +A++KLYVEAGE         
Sbjct: 435 SSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLD 494

Query: 241 ------------------------------------------------------------ 273
                                                                       
Sbjct: 495 KASKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQAYINA 554

[Close]

BLAST of Chy4G083860 vs. TAIR 10
Match: AT1G80270.2 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 283.5 bits (724), Expect = 1.8e-76
Identity = 153/342 (44.74%), Postives = 212/342 (61.99%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK L FP++ F  + ML+L+K+I+R+KIADVLLLMEKENIKP+  TYKILID KG +NDI
Sbjct: 255 MKDLGFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDI 314

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           SGMEQ++++MK EG+ELD  T +L A+HY   GLK KA+ +LKE+E  + +  + + + L
Sbjct: 315 SGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDL 374

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           L  Y  L  EDEV+R+W+ICE+ P+ EE +AAI A+G+L  VQEAE  F+++VK  ++ S
Sbjct: 375 LSIYASLGREDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRAS 434

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
           +  YS+++ VY D KML+KGK+LV +MAESGC I+  T +A++KLYVEAGE         
Sbjct: 435 SSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLD 494

Query: 241 ------------------------------------------------------------ 273
                                                                       
Sbjct: 495 KASKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQAYINA 554

[Close]

BLAST of Chy4G083860 vs. TAIR 10
Match: AT1G80270.3 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 283.5 bits (724), Expect = 1.8e-76
Identity = 153/342 (44.74%), Postives = 212/342 (61.99%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK L FP++ F  + ML+L+K+I+R+KIADVLLLMEKENIKP+  TYKILID KG +NDI
Sbjct: 255 MKDLGFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDI 314

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           SGMEQ++++MK EG+ELD  T +L A+HY   GLK KA+ +LKE+E  + +  + + + L
Sbjct: 315 SGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDL 374

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           L  Y  L  EDEV+R+W+ICE+ P+ EE +AAI A+G+L  VQEAE  F+++VK  ++ S
Sbjct: 375 LSIYASLGREDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRAS 434

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
           +  YS+++ VY D KML+KGK+LV +MAESGC I+  T +A++KLYVEAGE         
Sbjct: 435 SSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLD 494

Query: 241 ------------------------------------------------------------ 273
                                                                       
Sbjct: 495 KASKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQAYINA 554

[Close]

BLAST of Chy4G083860 vs. TAIR 10
Match: AT1G15480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 282.0 bits (720), Expect = 5.3e-76
Identity = 151/342 (44.15%), Postives = 212/342 (61.99%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK L FP++TF  N ML+LYK+++++KIADVLLL+EKEN+KP   TYKILID KG SNDI
Sbjct: 253 MKDLGFPLSTFTCNQMLILYKRVDKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDI 312

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           +GMEQ+V++MK+EG+ELD+   +L+A+HY S GLK KA+ +LKE+E  + +  +   + L
Sbjct: 313 TGMEQIVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDL 372

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           L  YG LQ EDEVRR+W+ICE NP   E +AAI+A+G++  V++AE  F++V+K   ++S
Sbjct: 373 LSVYGYLQREDEVRRVWKICEENPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVS 432

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
           +  YS+++ VY D KM+++GK+LV QM++SGC+I   T +A++KLYVEAGE         
Sbjct: 433 SNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLS 492

Query: 241 ------------------------------------------------------------ 273
                                                                       
Sbjct: 493 KAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNA 552

[Close]

BLAST of Chy4G083860 vs. TAIR 10
Match: AT3G15590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 239.2 bits (609), Expect = 3.9e-63
Identity = 138/342 (40.35%), Postives = 191/342 (55.85%), Query Frame = 0


Query: 1   MKGLEFPMTTFAYNHMLVLYKKINRRKIADVLLLMEKENIKPAPFTYKILIDGKGLSNDI 60
           MK L+FP + FA N +L+LY   +R+KI+DVLLLME+ENIKP+  TY  LI+ KGL+ DI
Sbjct: 268 MKELKFPTSVFACNQLLLLYSMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDI 327

Query: 61  SGMEQVVDSMKAEGIELDVSTLSLLAKHYVSVGLKVKAKDILKEIEETNSKGPQLSRRIL 120
           +GME++V+++K EGIELD    S+LAK+Y+  GLK +A+D++KEIE    +      R L
Sbjct: 328 TGMEKIVETIKEEGIELDPELQSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSL 387

Query: 121 LPFYGQLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKFFDRVVKTWKKLS 180
           LP Y  +   D VRRL    + NP  + C++AI AWG+LK V+EAE  F+R+V+ +K   
Sbjct: 388 LPLYADIGDSDNVRRLSRFVDQNPRYDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFP 447

Query: 181 ARHYSIMMNVYRDSKMLTKGKELVNQMAESGCHIDLWTCNAIVKLYVEAGE--------- 240
              Y  +M +Y ++KML KG++LV +M  +G  I   T +A+VKLY++AGE         
Sbjct: 448 MMPYFALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYIKAGEVGKAELILN 507

Query: 241 ------------------------------------------------------------ 273
                                                                       
Sbjct: 508 RATKDNKMRPMFTTYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQYETVLLAYINA 567

The following BLAST results are available for this feature:

BLAST of Chy4G083860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C977	2.5e-75	44.74	Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidop...	[more]
Q9XI21	7.4e-75	44.15	Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidop...	[more]
Q9LRP6	5.5e-62	40.35	Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidop...	[more]
O22714	8.3e-18	26.27	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
Q9FZ24	1.4e-12	25.71	Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidop...	[more]

BLAST of Chy4G083860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCB7	1.6e-128	73.98	PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819900 PE...	[more]
A0A5D3DPU7	5.6e-110	63.45	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7UF67	1.3e-109	63.45	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B743	1.8e-108	62.87	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isofor...	[more]
A0A1S3B8B0	2.4e-108	63.45	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isofor...	[more]

BLAST of Chy4G083860 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651173.1	1.25e-159	74.19	hypothetical protein Csa_001132 [Cucumis sativus]	[more]
XP_011652182.1	1.51e-159	74.19	pentatricopeptide repeat-containing protein At1g80270, mitochondrial isoform X3 ...	[more]
KAA0053891.1	2.18e-135	63.45	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25515...	[more]
KAA0053890.1	1.06e-134	63.45	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008443248.1	1.98e-133	63.45	PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-...	[more]

BLAST of Chy4G083860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80270.1	1.8e-76	44.74	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G80270.2	1.8e-76	44.74	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G80270.3	1.8e-76	44.74	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G15480.1	5.3e-76	44.15	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G15590.1	3.9e-63	40.35	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 11..51 e-value: 0.0016 score: 18.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 45..79 e-value: 0.0023 score: 16.0 coord: 184..215 e-value: 1.1E-4 score: 20.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 183..212 e-value: 0.016 score: 15.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 127..270 e-value: 2.3E-14 score: 55.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 2..112 e-value: 1.3E-12 score: 49.7
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 1..231 coord: 232..272
None	No IPR available	PANTHER	PTHR45717:SF15	OS01G0280400 PROTEIN	coord: 1..231 coord: 232..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G083860.1	Chy4G083860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding