Chy4G083640 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G083640
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH04: 22847600 .. 22848388 (+)
RNA-Seq Expression	Chy4G083640
Synteny	Chy4G083640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAGAGAGGGAACTGTCTTCATGGAACATTATGATTACTGGATTAATTCAAAACGGTAAACTACAAAGGGCAGTGGATTTGTTCTATAAAATGCCCAACAAAGATGTTGTCACTTGGACGGCAGTGATTTCTGGACACGTTCAAAATGGACGAAGTGAAGAAGCATTGAAGATCTTTACAGGAATGCAAGCAGCAAATAATGTAAAACCAAACGAAGGAACTTTTGTCAGTGTGTTGGGTGCTTGTAGTAAATTAGCTGCTCTTTGTGAGGGACAACAAATTCACCAGATAATAAGCAAGACGGTTTACCAAGAAGTTGCAGATGTGGTATCAGCTTTAATAAACATGTATTCAAAATGTGGGGAGTTAGAACTGGCTCGCAAGATATTTGATGATGGATCAATAGGCCACAGAGATGTGGTTTCTTGGAATAGTATGATTGCTGCCTATGCTCATCATGGCCATGGCCACAAAGCAATTAGTTTATTTGATGAAATGCAGGCATTGGGATTTCGTCCTGATAATGTCACCTATATTGCATTGCTTTCTGCTTGTAGTCATGCTGGTCTTGTGGATGAGGGGTTGAAATTATTTGAAAACCTCGTAAGAGATAGGTCTATAAAACTAAGAGAAGATCATTTTACATGTCTAGTTGATCTTTTTGGTCGAACCGGACGACTTCAAGAGGCATTTGATTTCATCAAGGGGCTTGAGGTCAAGCCTTCGGCATCTGTTTGGGCAGCTCTTCTTGCCAGATGTAATGTTCATGGGCATAAAAACGGCTGA

mRNA sequence

ATGCCAGAGAGGGAACTGTCTTCATGGAACATTATGATTACTGGATTAATTCAAAACGGTAAACTACAAAGGGCAGTGGATTTGTTCTATAAAATGCCCAACAAAGATGTTGTCACTTGGACGGCAGTGATTTCTGGACACGTTCAAAATGGACGAAGTGAAGAAGCATTGAAGATCTTTACAGGAATGCAAGCAGCAAATAATGTAAAACCAAACGAAGGAACTTTTGTCAGTGTGTTGGGTGCTTGTAGTAAATTAGCTGCTCTTTGTGAGGGACAACAAATTCACCAGATAATAAGCAAGACGGTTTACCAAGAAGTTGCAGATGTGGTATCAGCTTTAATAAACATGTATTCAAAATGTGGGGAGTTAGAACTGGCTCGCAAGATATTTGATGATGGATCAATAGGCCACAGAGATGTGGTTTCTTGGAATAGTATGATTGCTGCCTATGCTCATCATGGCCATGGCCACAAAGCAATTAGTTTATTTGATGAAATGCAGGCATTGGGATTTCGTCCTGATAATGTCACCTATATTGCATTGCTTTCTGCTTGTAGTCATGCTGGTCTTGTGGATGAGGGGTTGAAATTATTTGAAAACCTCGTAAGAGATAGGTCTATAAAACTAAGAGAAGATCATTTTACATGTCTAGTTGATCTTTTTGGTCGAACCGGACGACTTCAAGAGGCATTTGATTTCATCAAGGGGCTTGAGGTCAAGCCTTCGGCATCTGTTTGGGCAGCTCTTCTTGCCAGATGTAATGTTCATGGGCATAAAAACGGCTGA

Coding sequence (CDS)

ATGCCAGAGAGGGAACTGTCTTCATGGAACATTATGATTACTGGATTAATTCAAAACGGTAAACTACAAAGGGCAGTGGATTTGTTCTATAAAATGCCCAACAAAGATGTTGTCACTTGGACGGCAGTGATTTCTGGACACGTTCAAAATGGACGAAGTGAAGAAGCATTGAAGATCTTTACAGGAATGCAAGCAGCAAATAATGTAAAACCAAACGAAGGAACTTTTGTCAGTGTGTTGGGTGCTTGTAGTAAATTAGCTGCTCTTTGTGAGGGACAACAAATTCACCAGATAATAAGCAAGACGGTTTACCAAGAAGTTGCAGATGTGGTATCAGCTTTAATAAACATGTATTCAAAATGTGGGGAGTTAGAACTGGCTCGCAAGATATTTGATGATGGATCAATAGGCCACAGAGATGTGGTTTCTTGGAATAGTATGATTGCTGCCTATGCTCATCATGGCCATGGCCACAAAGCAATTAGTTTATTTGATGAAATGCAGGCATTGGGATTTCGTCCTGATAATGTCACCTATATTGCATTGCTTTCTGCTTGTAGTCATGCTGGTCTTGTGGATGAGGGGTTGAAATTATTTGAAAACCTCGTAAGAGATAGGTCTATAAAACTAAGAGAAGATCATTTTACATGTCTAGTTGATCTTTTTGGTCGAACCGGACGACTTCAAGAGGCATTTGATTTCATCAAGGGGCTTGAGGTCAAGCCTTCGGCATCTGTTTGGGCAGCTCTTCTTGCCAGATGTAATGTTCATGGGCATAAAAACGGCTGA

Protein sequence

MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIFTGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEVKPSASVWAALLARCNVHGHKNG*

Homology

[Close]

BLAST of Chy4G083640 vs. ExPASy Swiss-Prot
Match: O64766 (Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E15 PE=2 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.2e-84
Identity = 144/257 (56.03%), Postives = 199/257 (77.43%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           MPER+ +SWN MITG I+N ++ +A  LF +MP K+V++WT +I+G+V+N  +EEAL +F
Sbjct: 259 MPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVF 318

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
           + M    +VKPN GT+VS+L ACS LA L EGQQIHQ+ISK+V+Q+   V SAL+NMYSK
Sbjct: 319 SKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSK 378

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
            GEL  ARK+FD+G +  RD++SWNSMIA YAHHGHG +AI ++++M+  GF+P  VTY+
Sbjct: 379 SGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYL 438

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
            LL ACSHAGLV++G++ F++LVRD S+ LRE+H+TCLVDL GR GRL++  +FI   + 
Sbjct: 439 NLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDA 498

Query: 241 KPSASVWAALLARCNVH 258
           + S S + A+L+ CNVH
Sbjct: 499 RLSRSFYGAILSACNVH 515

[Close]

BLAST of Chy4G083640 vs. ExPASy Swiss-Prot
Match: Q9M4P3 (Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DYW10 PE=2 SV=3)

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-59
Identity = 115/257 (44.75%), Postives = 170/257 (66.15%), Query Frame = 0


Query: 2   PERELSSWNIMITGLIQNGKLQRAVDLFYKMP-NKDVVTWTAVISGHVQNGRSEEALKIF 61
           P R + +W  MITG ++  K++ A  +F  M  NK++VTW A+ISG+V+N R E+ LK+F
Sbjct: 213 PVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF 272

Query: 62  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 121
             M     ++PN     S L  CS+L+AL  G+QIHQI+SK+        +++LI+MY K
Sbjct: 273 RAM-LEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCK 332

Query: 122 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 181
           CGEL  A K+F+   +  +DVV+WN+MI+ YA HG+  KA+ LF EM     RPD +T++
Sbjct: 333 CGELGDAWKLFE--VMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 392

Query: 182 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 241
           A+L AC+HAGLV+ G+  FE++VRD  ++ + DH+TC+VDL GR G+L+EA   I+ +  
Sbjct: 393 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF 452

Query: 242 KPSASVWAALLARCNVH 258
           +P A+V+  LL  C VH
Sbjct: 453 RPHAAVFGTLLGACRVH 466

[Close]

BLAST of Chy4G083640 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.6e-58
Identity = 108/259 (41.70%), Postives = 162/259 (62.55%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           MP R +S+WN MITG  Q GK+  A +LF KMP +D V+W A+I+G+ Q+G S EAL++F
Sbjct: 338 MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLF 397

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
             M+     + N  +F S L  C+ + AL  G+Q+H  + K  Y+    V +AL+ MY K
Sbjct: 398 VQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 457

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CG +E A  +F +  +  +D+VSWN+MIA Y+ HG G  A+  F+ M+  G +PD+ T +
Sbjct: 458 CGSIEEANDLFKE--MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 517

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
           A+LSACSH GLVD+G + F  + +D  +     H+ C+VDL GR G L++A + +K +  
Sbjct: 518 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPF 577

Query: 241 KPSASVWAALLARCNVHGH 260
           +P A++W  LL    VHG+
Sbjct: 578 EPDAAIWGTLLGASRVHGN 593

[Close]

BLAST of Chy4G083640 vs. ExPASy Swiss-Prot
Match: Q9FNN7 (Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E20 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.6e-58
Identity = 110/259 (42.47%), Postives = 166/259 (64.09%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           M +R++  WN MITG  + G ++ A++LF  MP K+V +WT VISG  QNG   EALK+F
Sbjct: 143 MSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMF 202

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
             M+   +VKPN  T VSVL AC+ L  L  G+++     +  + +   V +A I MYSK
Sbjct: 203 LCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSK 262

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CG +++A+++F++     R++ SWNSMI + A HG   +A++LF +M   G +PD VT++
Sbjct: 263 CGMIDVAKRLFEELG-NQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFV 322

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
            LL AC H G+V +G +LF+++     I  + +H+ C++DL GR G+LQEA+D IK + +
Sbjct: 323 GLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPM 382

Query: 241 KPSASVWAALLARCNVHGH 260
           KP A VW  LL  C+ HG+
Sbjct: 383 KPDAVVWGTLLGACSFHGN 400

[Close]

BLAST of Chy4G083640 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.1e-58
Identity = 108/257 (42.02%), Postives = 175/257 (68.09%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           +PE +  SWN +I G ++ GK+  A+ LF KM  K+ ++WT +ISG+VQ   ++EAL++F
Sbjct: 176 IPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLF 235

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
             MQ  ++V+P+  +  + L AC++L AL +G+ IH  ++KT  +  + +   LI+MY+K
Sbjct: 236 HEMQ-NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAK 295

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CGE+E A ++F   +I  + V +W ++I+ YA+HGHG +AIS F EMQ +G +P+ +T+ 
Sbjct: 296 CGEMEEALEVFK--NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFT 355

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
           A+L+ACS+ GLV+EG  +F ++ RD ++K   +H+ C+VDL GR G L EA  FI+ + +
Sbjct: 356 AVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPL 415

Query: 241 KPSASVWAALLARCNVH 258
           KP+A +W ALL  C +H
Sbjct: 416 KPNAVIWGALLKACRIH 429

[Close]

BLAST of Chy4G083640 vs. ExPASy TrEMBL
Match: A0A0A0LCG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822150 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.1e-139
Identity = 247/259 (95.37%), Postives = 251/259 (96.91%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           MPERELSSWN MITG IQNGKL+RAVD FYKM NK+VVTWTAVISGHVQ+GRSEEALKIF
Sbjct: 279 MPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIF 338

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
           + MQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK
Sbjct: 339 SEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 398

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CGELELARKIFDDGSIGHRDVVSWN MIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI
Sbjct: 399 CGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 458

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
           ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGR GRLQEAFDFIKGLEV
Sbjct: 459 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEV 518

Query: 241 KPSASVWAALLARCNVHGH 260
           KPSASVWAALLA CNVHGH
Sbjct: 519 KPSASVWAALLAGCNVHGH 537

[Close]

BLAST of Chy4G083640 vs. ExPASy TrEMBL
Match: A0A5A7UH59 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006890 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 8.9e-137
Identity = 241/259 (93.05%), Postives = 247/259 (95.37%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           MPERELSSWN MITG IQNGKL+RAVDLFYKM NK+VVTWTAVISGHVQ+GRSEEALKIF
Sbjct: 279 MPERELSSWNTMITGFIQNGKLERAVDLFYKMSNKNVVTWTAVISGHVQDGRSEEALKIF 338

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
           + MQAANNVKPNEGTFVSVLGACSKLA LCEGQQIHQ+ISKTVYQEVADVVSALINMYSK
Sbjct: 339 SEMQAANNVKPNEGTFVSVLGACSKLAVLCEGQQIHQVISKTVYQEVADVVSALINMYSK 398

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CGELELARKIFDDGSI HRDVVSWN MIAAYAHHGHGHKAI LFDEMQALGFRPDNVTYI
Sbjct: 399 CGELELARKIFDDGSIDHRDVVSWNGMIAAYAHHGHGHKAICLFDEMQALGFRPDNVTYI 458

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
           ALLSACSHAGLVDEGLKLFENL+RDRSIKLREDHFTCLVDLFGR GRLQEAFDFI GLEV
Sbjct: 459 ALLSACSHAGLVDEGLKLFENLLRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFINGLEV 518

Query: 241 KPSASVWAALLARCNVHGH 260
           KPS SVWAALLA CNVHGH
Sbjct: 519 KPSTSVWAALLAGCNVHGH 537

[Close]

BLAST of Chy4G083640 vs. ExPASy TrEMBL
Match: A0A1S3B8F2 (pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486904 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 8.9e-137
Identity = 241/259 (93.05%), Postives = 247/259 (95.37%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           MPERELSSWN MITG IQNGKL+RAVDLFYKM NK+VVTWTAVISGHVQ+GRSEEALKIF
Sbjct: 279 MPERELSSWNTMITGFIQNGKLERAVDLFYKMSNKNVVTWTAVISGHVQDGRSEEALKIF 338

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
           + MQAANNVKPNEGTFVSVLGACSKLA LCEGQQIHQ+ISKTVYQEVADVVSALINMYSK
Sbjct: 339 SEMQAANNVKPNEGTFVSVLGACSKLAVLCEGQQIHQVISKTVYQEVADVVSALINMYSK 398

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CGELELARKIFDDGSI HRDVVSWN MIAAYAHHGHGHKAI LFDEMQALGFRPDNVTYI
Sbjct: 399 CGELELARKIFDDGSIDHRDVVSWNGMIAAYAHHGHGHKAICLFDEMQALGFRPDNVTYI 458

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
           ALLSACSHAGLVDEGLKLFENL+RDRSIKLREDHFTCLVDLFGR GRLQEAFDFI GLEV
Sbjct: 459 ALLSACSHAGLVDEGLKLFENLLRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFINGLEV 518

Query: 241 KPSASVWAALLARCNVHGH 260
           KPS SVWAALLA CNVHGH
Sbjct: 519 KPSTSVWAALLAGCNVHGH 537

[Close]

BLAST of Chy4G083640 vs. ExPASy TrEMBL
Match: A0A6J1J8B4 (pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111482256 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 7.5e-128
Identity = 225/259 (86.87%), Postives = 242/259 (93.44%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           +PER++ SWN MITG IQNGKL+RAVDLFYKMPNK+VV+WTA+ISGHVQ+G+SEEALKIF
Sbjct: 279 IPERDVPSWNAMITGFIQNGKLERAVDLFYKMPNKNVVSWTAMISGHVQDGQSEEALKIF 338

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
           + MQAANNVKPNEGTFVSVLGACS LA LCEGQQIHQIISK+VYQEVADVVSALI+MYSK
Sbjct: 339 SEMQAANNVKPNEGTFVSVLGACSNLAGLCEGQQIHQIISKSVYQEVADVVSALISMYSK 398

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CGEL++ARKIFDDGS  HRDVVSWN MIAAYAHHGHG+KAI LFDEMQALGF PDNVTYI
Sbjct: 399 CGELDMARKIFDDGSTSHRDVVSWNGMIAAYAHHGHGYKAIRLFDEMQALGFCPDNVTYI 458

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
           ALLSACSHAGLVDEGLK FENLVRD SI LREDHFTCLVDLFGR GRLQEAFDFIKGLE 
Sbjct: 459 ALLSACSHAGLVDEGLKYFENLVRDGSITLREDHFTCLVDLFGRAGRLQEAFDFIKGLED 518

Query: 241 KPSASVWAALLARCNVHGH 260
           KPS+SVWAALLA CNVHG+
Sbjct: 519 KPSSSVWAALLAGCNVHGN 537

[Close]

BLAST of Chy4G083640 vs. ExPASy TrEMBL
Match: A0A6J1F4K7 (pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111442054 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127
Identity = 224/259 (86.49%), Postives = 241/259 (93.05%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           +PER++ SWN MITG IQNGKL+RAVDLFYKMPNK+VV+WTA+ISGHVQ+G+SEEALKIF
Sbjct: 279 IPERDVPSWNAMITGFIQNGKLERAVDLFYKMPNKNVVSWTAMISGHVQDGQSEEALKIF 338

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
           + MQAANNVKPNEGTFVSVLGACS LA LCEGQQIHQIISK+VYQ V DVVSALI+MYSK
Sbjct: 339 SEMQAANNVKPNEGTFVSVLGACSNLAGLCEGQQIHQIISKSVYQGVTDVVSALISMYSK 398

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CGEL++ARKIFDDGS  HRDVVSWN MIAAYAHHGHG+KAI LFDEMQALGFRPDNVTYI
Sbjct: 399 CGELDMARKIFDDGSTSHRDVVSWNGMIAAYAHHGHGYKAIRLFDEMQALGFRPDNVTYI 458

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
           ALLSACSHAGLVDEGLK FENLVRD SI LREDHFTCLVDLFGR GRLQEAFDFIKGLE 
Sbjct: 459 ALLSACSHAGLVDEGLKYFENLVRDGSITLREDHFTCLVDLFGRAGRLQEAFDFIKGLED 518

Query: 241 KPSASVWAALLARCNVHGH 260
           KPS+SVWAALLA CNVHG+
Sbjct: 519 KPSSSVWAALLAGCNVHGN 537

[Close]

BLAST of Chy4G083640 vs. NCBI nr
Match: XP_031739296.1 (pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Cucumis sativus] >XP_031739297.1 pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Cucumis sativus])

HSP 1 Score: 498 bits (1283), Expect = 1.38e-171
Identity = 247/259 (95.37%), Postives = 251/259 (96.91%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           MPERELSSWN MITG IQNGKL+RAVD FYKM NK+VVTWTAVISGHVQ+GRSEEALKIF
Sbjct: 280 MPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIF 339

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
           + MQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK
Sbjct: 340 SEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 399

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CGELELARKIFDDGSIGHRDVVSWN MIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI
Sbjct: 400 CGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 459

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
           ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGR GRLQEAFDFIKGLEV
Sbjct: 460 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEV 519

Query: 241 KPSASVWAALLARCNVHGH 259
           KPSASVWAALLA CNVHGH
Sbjct: 520 KPSASVWAALLAGCNVHGH 538

[Close]

BLAST of Chy4G083640 vs. NCBI nr
Match: XP_008443284.2 (PREDICTED: pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Cucumis melo] >KAA0053867.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25537.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 489 bits (1258), Expect = 8.15e-168
Identity = 241/259 (93.05%), Postives = 247/259 (95.37%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           MPERELSSWN MITG IQNGKL+RAVDLFYKM NK+VVTWTAVISGHVQ+GRSEEALKIF
Sbjct: 279 MPERELSSWNTMITGFIQNGKLERAVDLFYKMSNKNVVTWTAVISGHVQDGRSEEALKIF 338

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
           + MQAANNVKPNEGTFVSVLGACSKLA LCEGQQIHQ+ISKTVYQEVADVVSALINMYSK
Sbjct: 339 SEMQAANNVKPNEGTFVSVLGACSKLAVLCEGQQIHQVISKTVYQEVADVVSALINMYSK 398

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CGELELARKIFDDGSI HRDVVSWN MIAAYAHHGHGHKAI LFDEMQALGFRPDNVTYI
Sbjct: 399 CGELELARKIFDDGSIDHRDVVSWNGMIAAYAHHGHGHKAICLFDEMQALGFRPDNVTYI 458

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
           ALLSACSHAGLVDEGLKLFENL+RDRSIKLREDHFTCLVDLFGR GRLQEAFDFI GLEV
Sbjct: 459 ALLSACSHAGLVDEGLKLFENLLRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFINGLEV 518

Query: 241 KPSASVWAALLARCNVHGH 259
           KPS SVWAALLA CNVHGH
Sbjct: 519 KPSTSVWAALLAGCNVHGH 537

[Close]

BLAST of Chy4G083640 vs. NCBI nr
Match: XP_038906178.1 (pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X2 [Benincasa hispida] >XP_038906179.1 pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 474 bits (1219), Expect = 3.54e-163
Identity = 232/259 (89.58%), Postives = 245/259 (94.59%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           MPER++ SWN MITG IQNGKL+RAVDLFYKMPNK+VVTWTA+ISGHVQ+G+SEEALKIF
Sbjct: 188 MPERDVPSWNTMITGFIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIF 247

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
           + MQAANNVKPNEGTFVSVLGACS LA LCEGQQIHQIISK+VYQEVADVVSALINMYSK
Sbjct: 248 SEMQAANNVKPNEGTFVSVLGACSNLAGLCEGQQIHQIISKSVYQEVADVVSALINMYSK 307

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CGEL + RKIFDDGS+ HRDVVSWN MIAAYAHHGHGH+AI LFDEMQALGFRPDNVTYI
Sbjct: 308 CGELYMGRKIFDDGSMSHRDVVSWNGMIAAYAHHGHGHEAICLFDEMQALGFRPDNVTYI 367

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
           ALLSACSHAGLVDEGLKLFENLVRD SIKLREDHFTCLVDLFGR GRLQEAFDFIKGLEV
Sbjct: 368 ALLSACSHAGLVDEGLKLFENLVRDGSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEV 427

Query: 241 KPSASVWAALLARCNVHGH 259
           KPSASVWAALLA CNVHG+
Sbjct: 428 KPSASVWAALLAGCNVHGN 446

[Close]

BLAST of Chy4G083640 vs. NCBI nr
Match: XP_038906180.1 (pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X3 [Benincasa hispida])

HSP 1 Score: 474 bits (1219), Expect = 1.47e-162
Identity = 232/259 (89.58%), Postives = 245/259 (94.59%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           MPER++ SWN MITG IQNGKL+RAVDLFYKMPNK+VVTWTA+ISGHVQ+G+SEEALKIF
Sbjct: 232 MPERDVPSWNTMITGFIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIF 291

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
           + MQAANNVKPNEGTFVSVLGACS LA LCEGQQIHQIISK+VYQEVADVVSALINMYSK
Sbjct: 292 SEMQAANNVKPNEGTFVSVLGACSNLAGLCEGQQIHQIISKSVYQEVADVVSALINMYSK 351

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CGEL + RKIFDDGS+ HRDVVSWN MIAAYAHHGHGH+AI LFDEMQALGFRPDNVTYI
Sbjct: 352 CGELYMGRKIFDDGSMSHRDVVSWNGMIAAYAHHGHGHEAICLFDEMQALGFRPDNVTYI 411

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
           ALLSACSHAGLVDEGLKLFENLVRD SIKLREDHFTCLVDLFGR GRLQEAFDFIKGLEV
Sbjct: 412 ALLSACSHAGLVDEGLKLFENLVRDGSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEV 471

Query: 241 KPSASVWAALLARCNVHGH 259
           KPSASVWAALLA CNVHG+
Sbjct: 472 KPSASVWAALLAGCNVHGN 490

[Close]

BLAST of Chy4G083640 vs. NCBI nr
Match: XP_038906177.1 (pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 474 bits (1219), Expect = 6.50e-162
Identity = 232/259 (89.58%), Postives = 245/259 (94.59%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           MPER++ SWN MITG IQNGKL+RAVDLFYKMPNK+VVTWTA+ISGHVQ+G+SEEALKIF
Sbjct: 279 MPERDVPSWNTMITGFIQNGKLERAVDLFYKMPNKNVVTWTAMISGHVQDGQSEEALKIF 338

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
           + MQAANNVKPNEGTFVSVLGACS LA LCEGQQIHQIISK+VYQEVADVVSALINMYSK
Sbjct: 339 SEMQAANNVKPNEGTFVSVLGACSNLAGLCEGQQIHQIISKSVYQEVADVVSALINMYSK 398

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CGEL + RKIFDDGS+ HRDVVSWN MIAAYAHHGHGH+AI LFDEMQALGFRPDNVTYI
Sbjct: 399 CGELYMGRKIFDDGSMSHRDVVSWNGMIAAYAHHGHGHEAICLFDEMQALGFRPDNVTYI 458

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
           ALLSACSHAGLVDEGLKLFENLVRD SIKLREDHFTCLVDLFGR GRLQEAFDFIKGLEV
Sbjct: 459 ALLSACSHAGLVDEGLKLFENLVRDGSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEV 518

Query: 241 KPSASVWAALLARCNVHGH 259
           KPSASVWAALLA CNVHG+
Sbjct: 519 KPSASVWAALLAGCNVHGN 537

[Close]

BLAST of Chy4G083640 vs. TAIR 10
Match: AT2G35030.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 313.5 bits (802), Expect = 1.6e-85
Identity = 144/257 (56.03%), Postives = 199/257 (77.43%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           MPER+ +SWN MITG I+N ++ +A  LF +MP K+V++WT +I+G+V+N  +EEAL +F
Sbjct: 259 MPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVF 318

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
           + M    +VKPN GT+VS+L ACS LA L EGQQIHQ+ISK+V+Q+   V SAL+NMYSK
Sbjct: 319 SKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSK 378

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
            GEL  ARK+FD+G +  RD++SWNSMIA YAHHGHG +AI ++++M+  GF+P  VTY+
Sbjct: 379 SGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYL 438

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
            LL ACSHAGLV++G++ F++LVRD S+ LRE+H+TCLVDL GR GRL++  +FI   + 
Sbjct: 439 NLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDA 498

Query: 241 KPSASVWAALLARCNVH 258
           + S S + A+L+ CNVH
Sbjct: 499 RLSRSFYGAILSACNVH 515

[Close]

BLAST of Chy4G083640 vs. TAIR 10
Match: AT4G16835.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 230.7 bits (587), Expect = 1.3e-60
Identity = 115/257 (44.75%), Postives = 170/257 (66.15%), Query Frame = 0


Query: 2   PERELSSWNIMITGLIQNGKLQRAVDLFYKMP-NKDVVTWTAVISGHVQNGRSEEALKIF 61
           P R + +W  MITG ++  K++ A  +F  M  NK++VTW A+ISG+V+N R E+ LK+F
Sbjct: 213 PVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF 272

Query: 62  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 121
             M     ++PN     S L  CS+L+AL  G+QIHQI+SK+        +++LI+MY K
Sbjct: 273 RAM-LEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCK 332

Query: 122 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 181
           CGEL  A K+F+   +  +DVV+WN+MI+ YA HG+  KA+ LF EM     RPD +T++
Sbjct: 333 CGELGDAWKLFE--VMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 392

Query: 182 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 241
           A+L AC+HAGLV+ G+  FE++VRD  ++ + DH+TC+VDL GR G+L+EA   I+ +  
Sbjct: 393 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF 452

Query: 242 KPSASVWAALLARCNVH 258
           +P A+V+  LL  C VH
Sbjct: 453 RPHAAVFGTLLGACRVH 466

[Close]

BLAST of Chy4G083640 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 227.6 bits (579), Expect = 1.1e-59
Identity = 108/259 (41.70%), Postives = 162/259 (62.55%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           MP R +S+WN MITG  Q GK+  A +LF KMP +D V+W A+I+G+ Q+G S EAL++F
Sbjct: 338 MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLF 397

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
             M+     + N  +F S L  C+ + AL  G+Q+H  + K  Y+    V +AL+ MY K
Sbjct: 398 VQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 457

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CG +E A  +F +  +  +D+VSWN+MIA Y+ HG G  A+  F+ M+  G +PD+ T +
Sbjct: 458 CGSIEEANDLFKE--MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 517

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
           A+LSACSH GLVD+G + F  + +D  +     H+ C+VDL GR G L++A + +K +  
Sbjct: 518 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPF 577

Query: 241 KPSASVWAALLARCNVHGH 260
           +P A++W  LL    VHG+
Sbjct: 578 EPDAAIWGTLLGASRVHGN 593

[Close]

BLAST of Chy4G083640 vs. TAIR 10
Match: AT5G08510.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 226.5 bits (576), Expect = 2.5e-59
Identity = 110/259 (42.47%), Postives = 166/259 (64.09%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           M +R++  WN MITG  + G ++ A++LF  MP K+V +WT VISG  QNG   EALK+F
Sbjct: 143 MSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMF 202

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
             M+   +VKPN  T VSVL AC+ L  L  G+++     +  + +   V +A I MYSK
Sbjct: 203 LCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSK 262

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CG +++A+++F++     R++ SWNSMI + A HG   +A++LF +M   G +PD VT++
Sbjct: 263 CGMIDVAKRLFEELG-NQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFV 322

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
            LL AC H G+V +G +LF+++     I  + +H+ C++DL GR G+LQEA+D IK + +
Sbjct: 323 GLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPM 382

Query: 241 KPSASVWAALLARCNVHGH 260
           KP A VW  LL  C+ HG+
Sbjct: 383 KPDAVVWGTLLGACSFHGN 400

[Close]

BLAST of Chy4G083640 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 225.7 bits (574), Expect = 4.3e-59
Identity = 108/257 (42.02%), Postives = 175/257 (68.09%), Query Frame = 0


Query: 1   MPERELSSWNIMITGLIQNGKLQRAVDLFYKMPNKDVVTWTAVISGHVQNGRSEEALKIF 60
           +PE +  SWN +I G ++ GK+  A+ LF KM  K+ ++WT +ISG+VQ   ++EAL++F
Sbjct: 176 IPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLF 235

Query: 61  TGMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 120
             MQ  ++V+P+  +  + L AC++L AL +G+ IH  ++KT  +  + +   LI+MY+K
Sbjct: 236 HEMQ-NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAK 295

Query: 121 CGELELARKIFDDGSIGHRDVVSWNSMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 180
           CGE+E A ++F   +I  + V +W ++I+ YA+HGHG +AIS F EMQ +G +P+ +T+ 
Sbjct: 296 CGEMEEALEVFK--NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFT 355

Query: 181 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRTGRLQEAFDFIKGLEV 240
           A+L+ACS+ GLV+EG  +F ++ RD ++K   +H+ C+VDL GR G L EA  FI+ + +
Sbjct: 356 AVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPL 415

Query: 241 KPSASVWAALLARCNVH 258
           KP+A +W ALL  C +H
Sbjct: 416 KPNAVIWGALLKACRIH 429

The following BLAST results are available for this feature:

BLAST of Chy4G083640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64766	2.2e-84	56.03	Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidop...	[more]
Q9M4P3	1.9e-59	44.75	Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidop...	[more]
Q9SY02	1.6e-58	41.70	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q9FNN7	3.6e-58	42.47	Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	6.1e-58	42.02	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]

BLAST of Chy4G083640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCG2	1.1e-139	95.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822150 PE=4 SV=1	[more]
A0A5A7UH59	8.9e-137	93.05	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B8F2	8.9e-137	93.05	pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Cucumis ...	[more]
A0A6J1J8B4	7.5e-128	86.87	pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Cucurbit...	[more]
A0A6J1F4K7	1.7e-127	86.49	pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Cucurbit...	[more]

BLAST of Chy4G083640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739296.1	1.38e-171	95.37	pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Cucumis sa...	[more]
XP_008443284.2	8.15e-168	93.05	PREDICTED: pentatricopeptide repeat-containing protein At2g35030, mitochondrial ...	[more]
XP_038906178.1	3.54e-163	89.58	pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X2 ...	[more]
XP_038906180.1	1.47e-162	89.58	pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X3 ...	[more]
XP_038906177.1	6.50e-162	89.58	pentatricopeptide repeat-containing protein At2g35030, mitochondrial isoform X1 ...	[more]

BLAST of Chy4G083640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35030.1	1.6e-85	56.03	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G16835.1	1.3e-60	44.75	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02750.1	1.1e-59	41.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G08510.1	2.5e-59	42.47	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	4.3e-59	42.02	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..105 e-value: 2.6E-23 score: 84.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 108..261 e-value: 2.0E-35 score: 124.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 177..205 e-value: 4.0E-4 score: 18.4 coord: 142..175 e-value: 6.2E-10 score: 36.6 coord: 38..73 e-value: 1.6E-7 score: 29.0 coord: 8..37 e-value: 9.4E-6 score: 23.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 139..187 e-value: 2.4E-15 score: 56.4 coord: 35..84 e-value: 3.9E-12 score: 46.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 112..132 e-value: 0.0096 score: 16.1 coord: 215..236 e-value: 0.17 score: 12.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 5..35 score: 9.13082
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 140..174 score: 13.08785
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 175..210 score: 9.393891
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 36..71 score: 10.248873
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 1..259
None	No IPR available	PANTHER	PTHR47925:SF35	BNAA05G08880D PROTEIN	coord: 1..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G083640.1	Chy4G083640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding