Chy4G082580 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTCTATTCAAAATCCTGTGCTCTCCAACCAAGAAACTGTTGTGGATGTTAACGAATTCGTATCTGTTGAAAACCCAGATTCTAAACGCTCCAAGTTTGGATCTTTCTTCAAAAACCCTTACCCTCCTGGGTTTTCCCGAAAGGTAATCACCTTCTTGTATATCACTTATCACTTATGTTTACTTTGTTTAAAATCACTCCAAAACCTGCGTTTATCACTAAAGAATCACTTTATTGTTTAATTTTACACGTTTAAATCATTTTTTCATTCTGATATTCAACAAATCAAAACACTTTACAAGTGGTTTTGAATCGACAAAAGAGATTTTGACTCTTAAACATGTCTATCTCAGTAAAAGTCAATTCAACGATTATGATTTTTTTTCTTTTCCAACAATGATATAGCTGGTGGCGGAGGTGATAGCAACCTATTTGCTAGTGTTTGTGACATGTGGGGCGGCAGCATTGAACGCGAGCGATGCACGGAGAGTGTCGCAGCTTGGTGCTTCAGTTGCAGGTGGATTGATCGTGACTGTGATGATTTACGCTGTCGGACACGTTTCCGGTGCCCATATGAACCCGGCTGTCACCATGGCTTTTGCTGCAACTCGACACTTTCCATGGAAACAGGTATCAACTCTTTTATTCTTCAAATGGTTGAAATTGTCAGTAATATTTTCTTCGTTTAATCAATAACCTAATCATTTCTTCCCACATGTTCTCTAAAATTGTAGGGCGATTATGTCCAAGTATTTTCATTTAAAAAAAAAAAAAATTCAATATCTAACTTGTCTACTATTATTATTATTTTTTCTCTAGACTTAAGTACTAGACATAGAGTTTTGTTTTACTTTTGCCATTAATGCTTTTAGGGTAAGAATATTTATTAAGTGATTAATGAAAAATCAATCACGAGACAACACGGAGATTAATACAAACCATTAGAAAATTGATGGATCAAATTTATACTTTTAGAATTAAGGGATCAAATAAAAAGTTAAATAGAATTTTTTTGAGCTTAAATTTTATTTATGACGAATATATTTGTTTTGTTTATTGTTTATTATTATATATTATTTAACTACTTTCGTAAGCTAGCTAATCGATTAAAAATTAAATAATAACTAGTGCACGATTAATTTAATATGTTAATGATATTATATAGCCTTTTTTTTGTAAGGAAAAAGCCAGATAGTTGCTATTTACAAAAGGAAAAAAGGAAGAACTATTAGTTTATAAAATATCATTAGCAAGTAAATATAATATTAGTTAAACTAATGCTATAATTTAATAATGATCAAATCAACGTATTATAAAACTAAATTTGATACCTCATTTGTTTAAAATTTAATATTTAATATTTAGAGCGGTGCTAAGAATATAGGAACGAGGAGCACCTTGTTCTTTCCATGACTTCAAAATATATTTATATATCAATTTTAAATTGGGGGTTTCAAGTAATCGTCTAACTTTCTTCCAATTTATTAACTTTCTTTTTTAAAAAAACTACTAATCTATATTGTCTCGTGATATATAGGATTCTTCACCCTCCAATTATTATAAAAAATAGAATTAAATATTGTTCAAGTTGAGAATAACCTGTAAATATAGCAAATACAATCCAATAACTGTCTAGGGTTGAAGTATCACAAGGCTTTTAAAAATATGTCGATTTTTCAGATTTTTTTCTACTGATCCCCATTGTTTTTTAATATATTTCTTTAAAAACATTAGTCAAAAGTTTATTGTTGGAAAGAAATAAAAATGTGAGGTGAAAAATGAAAGCACACGAGAGCCATTAACCATGGTTTGGACTATTTATTATGACATTTAAGAGAAGAATTTGGTGGGATTTAAAATTGACCCTTAGCTTCTTCTAATAATTAGTTAGAAAGGAAGTCTAGAAGAATCACTATGTACATATAGGAAAAGGAGTAGAAATGAAATGATGATGAGATAACAAAAAGAGGTAAATGTAAGCCATATTTAGTGGCCACATGATGTAGGGTCAAGGGTTGTCCAAATATTATTCTACATCCATAGCCACAAGGACAAGCATATGTGATCTTTTTATGGCCACAACCTTGGCTTCATTTTGCCGACCAAGGAATTAGATGGGACATTTAGGCAGCATAATTCCAACACTTGAGAAATAGAAGAGATAGAGATAGAGATGTCCACCAAAAAGTTCTTGGCCCATTAGAAGTGGGAAGGTATAGAGAGAGAGCAAAAAAGAACAATACATATCTTCATGTCATGTGTGTTTTTATAGTCAAGATGGCCATCTTTTACTTTATAGATATATTGATATTTCACTTTTTGGAATTCCAATCAAAGCATTCAAAAGTAATAATTTTAAATGTCTAGTCTTGATCTTTTTGATTTTGGTTTAGGTTTTTTTAGGAGGGATTTTTTTGTCTCAACACACTTTAATAATTCTTGGTTTGATTGAGTAGGTTTTGTTAAAGATGTAGATCATATCTAAGTTTATGGGTAAGTCATGCTTGAAGTTTGTGTGTTTAAAACTACATGTAGAATTAATAAGTTTAGTTTGCCAGTTTTTCCACCATTTAATTAAAGTGTCCTTTGTTGTTATTTTGTGTGAAAAAAAATATTTCATCACACAAATCTATGAAACAAAAATCTAATTTGTATTAAACGTGATAAACAAAATTCCATGGTTAAAATTTATATCTATATATAAAAAAAGATGTAGGTCACGAGATAGAGCTAGCAAAATTCGAATTGAAATGAAATTGAATTAACAAAGATATATAAAGATATATAGTAAAAGACGTATTTAACATAACTAGAGAATGCATCATTTTTTGAGTTGTCTCCGTCTATCCACTAATTTAATCTCTTCTAGTATTCTGTTTTTTTTTTTAAAAAAAAAAGCATAATAAATAGGGGATGAAAGTATAGAATTCAAATGATTGTAAAGACAACGCAATAATTTATTTTGATGGATGCATTAATGAGATGTCAAAAATACATGTAGTTTTGTGAATTGAATTGATTGGGAAAGAAAAAGGGAATTTGGAAGATGATTGAAAGTAACACATAAAAGAGAGTGATGTACTATATTGGGTTTGATTGGTAGGTTCCATTGTATGGAGCAGCACAATTGAGTGGAGCAACTTGTGCAGCCTTTACATTGCGCTTATTATTGCATCCAATTAAGCATTTGGGCACAACTACTCCATCAGGGTCTGATTTACAAGCTTTAGTTATGGAGATTGTTGTTACATTCTCTATGATGTTTGTCACTCTTGCCGTTGCAACTGACACCAAAGCAGTAAGATTCTTTCACTTATACCTAAATATATCCCTTTAAATCAAAACTACTTTATTTATTTTAAGTCTTGAAAATTATAGGGAAAACTATTTTTAGAAAATGGATCTGTAATGAAATATGGATAAAAGTAAGTGGGAGCTAGGTTGGAGTCCCCACTCAACATTTAAAAAATGAAAATAAAGATAGAATGTAAATATTTAGAATGCAAAGAAATTAAATGAATGCAGTGAATAATTAATTCAATGTGTTTTTATTAATGTGGGAAAATGGTTGTTTTTGCTTTGGTTTGAGTTTGGCAGGTAGGAGAGCTTGCAGGTATTGCAGTAGGCTCAGCTGTTTGTATCACTTCCATCTTAGCTGGGTGAGTGAGGAAAATATAACATTTTTGGTTTTCCCTTTTTAACACACAAAATTAAAATTCTTTGCTTCAAAATATATTATAATAATAATAATCATAATTAAAAAAACATATTCTTATTTATTTTATTTTTTTCAAAAATACCCTTATTTTCTACATGTTAATACTTTATTGCAAATGTTTAACTTTACAAAACCATGCATGCATAGCAACAATTTTGATTTTAAAAAGTTCAATTTTTGGGAACTTTTTTTTTGTAAACCTCCGTTTTAAAAGAAAATGTTTTGAAAATATAAAGATTTTACATTAAACAAATAGATCTAATAAGCATTTGTGTTAGCAACTATTCAGACCTGTATCAGGAGGGTCAATGAACCCTGTGAGGACTTTAGGACCTGCATTGGCAAGTGATTATTATAAAGGGCTTTGGGTGTACTTTGTTGGGCCGGTTGTTGGAACTCAACTGGGGGCATGGTCATATAAGTTCATACGTGCCAGTGACAAACCTGTGCACTTAATTTCTCCTCATTCTTTTTCACTAAAAATGCGAAGAATGTCGAGATCAGATGTTAGCGAAAGCAATCATTAA ATGAGTTCTATTCAAAATCCTGTGCTCTCCAACCAAGAAACTGTTGTGGATGTTAACGAATTCGTATCTGTTGAAAACCCAGATTCTAAACGCTCCAAGTTTGGATCTTTCTTCAAAAACCCTTACCCTCCTGGGTTTTCCCGAAAGCTGGTGGCGGAGGTGATAGCAACCTATTTGCTAGTGTTTGTGACATGTGGGGCGGCAGCATTGAACGCGAGCGATGCACGGAGAGTGTCGCAGCTTGGTGCTTCAGTTGCAGGTGGATTGATCGTGACTGTGATGATTTACGCTGTCGGACACGTTTCCGGTGCCCATATGAACCCGGCTGTCACCATGGCTTTTGCTGCAACTCGACACTTTCCATGGAAACAGGTTCCATTGTATGGAGCAGCACAATTGAGTGGAGCAACTTGTGCAGCCTTTACATTGCGCTTATTATTGCATCCAATTAAGCATTTGGGCACAACTACTCCATCAGGGTCTGATTTACAAGCTTTAGTTATGGAGATTGTTGTTACATTCTCTATGATGTTTGTCACTCTTGCCGTTGCAACTGACACCAAAGCAGTAGGAGAGCTTGCAGGTATTGCAGTAGGCTCAGCTGTTTGTATCACTTCCATCTTAGCTGGACCTGTATCAGGAGGGTCAATGAACCCTGTGAGGACTTTAGGACCTGCATTGGCAAGTGATTATTATAAAGGGCTTTGGGTGTACTTTGTTGGGCCGGTTGTTGGAACTCAACTGGGGGCATGGTCATATAAGTTCATACGTGCCAGTGACAAACCTGTGCACTTAATTTCTCCTCATTCTTTTTCACTAAAAATGCGAAGAATGTCGAGATCAGATGTTAGCGAAAGCAATCATTAA ATGAGTTCTATTCAAAATCCTGTGCTCTCCAACCAAGAAACTGTTGTGGATGTTAACGAATTCGTATCTGTTGAAAACCCAGATTCTAAACGCTCCAAGTTTGGATCTTTCTTCAAAAACCCTTACCCTCCTGGGTTTTCCCGAAAGCTGGTGGCGGAGGTGATAGCAACCTATTTGCTAGTGTTTGTGACATGTGGGGCGGCAGCATTGAACGCGAGCGATGCACGGAGAGTGTCGCAGCTTGGTGCTTCAGTTGCAGGTGGATTGATCGTGACTGTGATGATTTACGCTGTCGGACACGTTTCCGGTGCCCATATGAACCCGGCTGTCACCATGGCTTTTGCTGCAACTCGACACTTTCCATGGAAACAGGTTCCATTGTATGGAGCAGCACAATTGAGTGGAGCAACTTGTGCAGCCTTTACATTGCGCTTATTATTGCATCCAATTAAGCATTTGGGCACAACTACTCCATCAGGGTCTGATTTACAAGCTTTAGTTATGGAGATTGTTGTTACATTCTCTATGATGTTTGTCACTCTTGCCGTTGCAACTGACACCAAAGCAGTAGGAGAGCTTGCAGGTATTGCAGTAGGCTCAGCTGTTTGTATCACTTCCATCTTAGCTGGACCTGTATCAGGAGGGTCAATGAACCCTGTGAGGACTTTAGGACCTGCATTGGCAAGTGATTATTATAAAGGGCTTTGGGTGTACTTTGTTGGGCCGGTTGTTGGAACTCAACTGGGGGCATGGTCATATAAGTTCATACGTGCCAGTGACAAACCTGTGCACTTAATTTCTCCTCATTCTTTTTCACTAAAAATGCGAAGAATGTCGAGATCAGATGTTAGCGAAAGCAATCATTAA MSSIQNPVLSNQETVVDVNEFVSVENPDSKRSKFGSFFKNPYPPGFSRKLVAEVIATYLLVFVTCGAAALNASDARRVSQLGASVAGGLIVTVMIYAVGHVSGAHMNPAVTMAFAATRHFPWKQVPLYGAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTLAVATDTKAVGELAGIAVGSAVCITSILAGPVSGGSMNPVRTLGPALASDYYKGLWVYFVGPVVGTQLGAWSYKFIRASDKPVHLISPHSFSLKMRRMSRSDVSESNH* Homology
BLAST of Chy4G082580 vs. ExPASy Swiss-Prot
Match: Q19KC1 (Aquaporin NIP2-1 OS=Zea mays OX=4577 GN=NIP2-1 PE=2 SV=2) HSP 1 Score: 321.2 bits (822), Expect = 1.2e-86 Identity = 164/269 (60.97%), Postives = 207/269 (76.95%), Query Frame = 0
BLAST of Chy4G082580 vs. ExPASy Swiss-Prot
Match: Q6Z2T3 (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-1 PE=1 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 1.7e-85 Identity = 160/263 (60.84%), Postives = 204/263 (77.57%), Query Frame = 0
BLAST of Chy4G082580 vs. ExPASy Swiss-Prot
Match: Q9ATN2 (Aquaporin NIP2-2 OS=Zea mays OX=4577 GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 317.0 bits (811), Expect = 2.2e-85 Identity = 158/237 (66.67%), Postives = 191/237 (80.59%), Query Frame = 0
BLAST of Chy4G082580 vs. ExPASy Swiss-Prot
Match: Q67WJ8 (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-2 PE=1 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 4.1e-84 Identity = 166/274 (60.58%), Postives = 204/274 (74.45%), Query Frame = 0
BLAST of Chy4G082580 vs. ExPASy Swiss-Prot
Match: Q9AT74 (Aquaporin NIP2-3 OS=Zea mays OX=4577 GN=NIP2-3 PE=2 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 3.0e-82 Identity = 161/254 (63.39%), Postives = 193/254 (75.98%), Query Frame = 0
BLAST of Chy4G082580 vs. ExPASy TrEMBL
Match: G8XUV3 (Si transport-like protein 1 OS=Cucumis sativus OX=3659 GN=Csa_3G826640 PE=2 SV=1) HSP 1 Score: 550.8 bits (1418), Expect = 3.3e-153 Identity = 286/288 (99.31%), Postives = 286/288 (99.31%), Query Frame = 0
BLAST of Chy4G082580 vs. ExPASy TrEMBL
Match: A0A1L7B7J0 (LSi1 OS=Cucumis sativus var. sativus OX=869827 GN=LSi1 PE=2 SV=1) HSP 1 Score: 550.8 bits (1418), Expect = 3.3e-153 Identity = 286/288 (99.31%), Postives = 286/288 (99.31%), Query Frame = 0
BLAST of Chy4G082580 vs. ExPASy TrEMBL
Match: A0A5D3DQ37 (Aquaporin NIP2-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008030 PE=3 SV=1) HSP 1 Score: 537.0 bits (1382), Expect = 5.0e-149 Identity = 281/288 (97.57%), Postives = 284/288 (98.61%), Query Frame = 0
BLAST of Chy4G082580 vs. ExPASy TrEMBL
Match: A0A1S3B807 (aquaporin NIP2-1-like OS=Cucumis melo OX=3656 GN=LOC103487002 PE=3 SV=1) HSP 1 Score: 537.0 bits (1382), Expect = 5.0e-149 Identity = 281/288 (97.57%), Postives = 284/288 (98.61%), Query Frame = 0
BLAST of Chy4G082580 vs. ExPASy TrEMBL
Match: Q7X9T0 (Nod26-like protein OS=Cucurbita pepo OX=3663 GN=NIP1 PE=2 SV=1) HSP 1 Score: 503.1 bits (1294), Expect = 8.0e-139 Identity = 261/285 (91.58%), Postives = 270/285 (94.74%), Query Frame = 0
BLAST of Chy4G082580 vs. NCBI nr
Match: NP_001267699.1 (aquaporin NIP2-1-like [Cucumis sativus] >ACU29603.1 Si transport-like protein 1 [Cucumis sativus] >AOW42547.1 silicon transporter Lsi1 [Cucumis sativus] >APT69293.1 LSi1 [Cucumis sativus var. sativus] >KGN59570.1 hypothetical protein Csa_001739 [Cucumis sativus]) HSP 1 Score: 553 bits (1425), Expect = 3.52e-198 Identity = 286/288 (99.31%), Postives = 286/288 (99.31%), Query Frame = 0
BLAST of Chy4G082580 vs. NCBI nr
Match: XP_008443411.1 (PREDICTED: aquaporin NIP2-1-like [Cucumis melo] >KAA0053759.1 aquaporin NIP2-1-like [Cucumis melo var. makuwa] >TYK25642.1 aquaporin NIP2-1-like [Cucumis melo var. makuwa]) HSP 1 Score: 539 bits (1389), Expect = 1.04e-192 Identity = 281/288 (97.57%), Postives = 284/288 (98.61%), Query Frame = 0
BLAST of Chy4G082580 vs. NCBI nr
Match: XP_038905688.1 (aquaporin NIP2-1-like [Benincasa hispida]) HSP 1 Score: 529 bits (1363), Expect = 7.16e-188 Identity = 270/285 (94.74%), Postives = 279/285 (97.89%), Query Frame = 0
BLAST of Chy4G082580 vs. NCBI nr
Match: XP_023529347.1 (aquaporin NIP2-1-like [Cucurbita pepo subsp. pepo] >KAG7022218.1 Aquaporin NIP2-1 [Cucurbita argyrosperma subsp. argyrosperma] >CAD67694.1 Nod26-like protein [Cucurbita pepo]) HSP 1 Score: 505 bits (1301), Expect = 2.79e-179 Identity = 261/285 (91.58%), Postives = 270/285 (94.74%), Query Frame = 0
BLAST of Chy4G082580 vs. NCBI nr
Match: XP_022934019.1 (aquaporin NIP2-1-like [Cucurbita moschata] >BAK09175.1 silicon transporter 1 [Cucurbita moschata]) HSP 1 Score: 504 bits (1297), Expect = 1.13e-178 Identity = 260/285 (91.23%), Postives = 269/285 (94.39%), Query Frame = 0
BLAST of Chy4G082580 vs. TAIR 10
Match: AT4G18910.1 (NOD26-like intrinsic protein 1;2 ) HSP 1 Score: 221.1 bits (562), Expect = 1.2e-57 Identity = 119/244 (48.77%), Postives = 161/244 (65.98%), Query Frame = 0
BLAST of Chy4G082580 vs. TAIR 10
Match: AT5G37820.1 (NOD26-like intrinsic protein 4;2 ) HSP 1 Score: 215.3 bits (547), Expect = 6.4e-56 Identity = 119/263 (45.25%), Postives = 166/263 (63.12%), Query Frame = 0
BLAST of Chy4G082580 vs. TAIR 10
Match: AT5G37810.1 (NOD26-like intrinsic protein 4;1 ) HSP 1 Score: 212.6 bits (540), Expect = 4.1e-55 Identity = 115/230 (50.00%), Postives = 152/230 (66.09%), Query Frame = 0
BLAST of Chy4G082580 vs. TAIR 10
Match: AT4G19030.1 (NOD26-like major intrinsic protein 1 ) HSP 1 Score: 211.1 bits (536), Expect = 1.2e-54 Identity = 116/242 (47.93%), Postives = 159/242 (65.70%), Query Frame = 0
BLAST of Chy4G082580 vs. TAIR 10
Match: AT1G31885.1 (NOD26-like intrinsic protein 3;1 ) HSP 1 Score: 204.9 bits (520), Expect = 8.7e-53 Identity = 119/295 (40.34%), Postives = 179/295 (60.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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