Chy4G080540 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCACTATGCGCAACGCCCCAACCAGAGAACATCAGATAGGGAGACATCACAGCTCTCAGAAGGGCGTCGCAACGTCGTGATGGGTGAAGGACATCTTGCGCAGAAGTTTAACTCCGCGCCACTGTGCTAATCTATTTTAGGAAAAAGTTGTAGTTTAGGGTTTACATTCTTTCTATTTGTTTTAGAGTTTTCAGCTACTAGTATCGTTCTTGTTCTTTAGAATTTTTTGGTTTGGAGAGAGGGTTCTGAGAAGATTTCAGTGGGTTTTTATTTTGTGCTTGGAGTCAATTTGAAAGCGTTGAAGAGACGAAATCAACCCAAAAATGTGACCAAAATGTTGGATAACACTTTTCTTTTCCTTTCGTATGTTGGATTCTTTTTTGCATTTTTGCATTCTTGTTATGGTTTTGTTTATGAAAATCATGTTAGACCGAACTTTCATCATTCCATAGCTAGATGAATTATTTAGATAAATGCTAAACACTTTTGTGGATTTTCAATAATGTTAATTTACTTTGTACTTTAATTTCTAGTATTATTGTTTTTAATGCTTTTGAATGTTTGATCAATATTATTGGAATGTTTTTATGATTTAAATTCTTGTTTTAATGATAGGGTTTAGATCAGTTATATTATCGTTCAAACACACGCACGATTAATCGGAAAACAATAGGGAGATTGTATATGAAGAACACTCCTGATCCTTTAATTTGTTTAATTATCTTGTTTTAAAATATTAGTAATTAAGTGATCAAAGAAAATATTGTTTTCAAAAGGGACAATTTGAATCATACTTTGGTCATTTTTGTTGCTTTCGTAGTTTAGTTACTCTATTTGCATCACAATTCCATCACTTAAATAAAATCAAAACAATCTCTAAAGTAGCTCAAGGTTATCAAACCTATTTCTTTAGGACAATAATCGGCCAATGTGGAGTTTTAATCATGTTTGGAACTTTTTCTAATCATTATATTGTTCTTTTAGTTCCAAACAACATCCTCTCAAAATTGTTTTCAAATCAATTATTTCAATTGCTCTCTGGAAGAAAACAATTGCTTCCATACGGGATTTAGTTACATGTATGGTTTTCGAGGGACACAATATTTAGAATACTTCTGTTTATTACTTGATTTACAATATTCACTTGCAATCTATCAAAAGCATTTTATTTCAAACAAATACAGTTTTTAGTCTATCATCTATTTGTCGAAATATTTATAAATTATTTGGTTGTATGACATATTTGTAAGGAGAATTATTTTAAACGACGATAATGTAAAAAAGTATTTACAAATTTATAATCTAAATAAAATAGTCTAATGGGAGCTAGAATAATCTTTTCTTTCCTCAAATATTGATTAATGTCTATTTTGCCTTGATGCGATTGTTTAAATGTATGTATTTTGAGTCACTTTGCACTTCATTGATAAGGTGCGACTATTGATATCGATGGAATGTACTTGTTTGGGTGAAGGTGGTTACGACTTACGTACACATCAAAAAGATGTATCCATTTACGATCCATGCATACTATAAACTTGTTAAAAGTTATGAAAAATTAAAAAGAACATAAAATTTGAAAAGACTACAAGTGTCTACATAAAAAATACAAACTAAATCAGCGATTGATATGTTGATGCATTTTCATAAATTTGCTTTCATGAACTTCTGTTCTCTTCTGATGCTGGGCTTCAGTTTCACCTAATTCTTTATAACTTAAGAATTATATATAAAACATGTGTTTTTTTTGCCACAGAGAGTATCAAAATTTGGTGGTGGTATTATATAATGACTCATTATTGTTACAATCTTTCAAATGATTTTCAGGATCTGTTCAATTTCGACCTCTTGTCTTGAATGCTATAAAAATTGAAAAAATTCTCACAAGTATGTTCATATATTCCCTCCATAAAGCTCTATGTTCTTCGTCAATTTCTTTAACTTAAATTGGTTATAAATCTCGTGACTTACCATGTGCCATTTTTATTTATTGAATCTCAAAGCTAAACAAAATGGGTTTATTCATCCATTATTTATTATCTCTGTTTTTAAAGCAGTTTTATCATCAAATGTATTTGTCACAAATTTGTTTCATTTTTTATATATGTTTGTTTGTGTTAGAAGTTGGAATATGTTTCTTTCTTTAATAACTAAGGGGGCGTTTGGGGGCGTGGAGTGAGTTATTATAATATGTGGGTTATAATAGTTTGTATGTTATTATAGTCTGTGCTTGTGGTGCAGATTATTATAGTTTGAGTTATTGTAATATATGTTTGGACAAGTGAGAATAGTGAAATAGGAGAGTAGGAAATAGTGACATATAGAAGATATTGGGTGAGGAATAGTGAAAAAGGGAGTGGAGAATAAGAGAAATAAAGGGGGAAAAAAAGTTGAATAGTCCTAATTCTAGGATTATGATCATTCTTGGCGCAAACATGGAGTGAGCTAAAATAGTCCACTCCTTCATAATTTGAGGGTCAAACGGTATATTTTTTAACATAGAGTGTAAAACTCATAATCAAAAGATCTTATTTTTAGTACTTTATTCAACCTAGAAAGAGATTTACTCGAATACGTTTACTATTTTTATGTATATTAAAAGACAAGAGTCTTGACAATTATATTTTTTTTTATCGGGAAGAACTACACAAGTTTAATTAAATATATTCATTATTTTTATTCTCTTAAAGGTGTTTTAAAATAATCTATAATAACATAACCATTCAAAATATAATAATAAAAAAAAAACTACATTTCAATTTAATTTCTAACGTACCTCAGATCAAATTTAACAAATTTATATTTGATGAAACTTCATTTTAAAAAATAAAAAACATTTAATTTTATAAAGTTTAATAAACGAAAACAAATGTACTTGAGCTGTTTGTATCTAAGTACATGAGCTTTTGGGTTTAAATTTTCCACTTAAATTCCTAAGTAAAAAAAGACTTGTTTAATTGGATTGCACATTAGTCTAGTCTTGTATCATTGTCTTTTTACCATTATCGTTATCGTTTAGAATGAACTAGTATCATATGTAGTAGGAACATTAATTGTGATAAATTCATAATTATCCTAGTGTAATAGTATTAGAATCTATAAGAAACCAATATCAATCAAATTGCATTTTATTGATTTAAGTATTTAATGCAACTACACGTGTAAATTACAACAAGCATAATCAAACAAAACTCACAACATGGTCACATCATATGATCACAAAATAGAGTTAAGGAGAGCATTATGAAATAGTATGCCCCAACATTCCCTCAATTAGTTACCAACATTCCCCCCATCACTCTTCACGTGGTTGCTGTTGCAGGCAAATGGTTAAGCAACAAAACAACGCATAGTTGCGCCTAAAAAAAGATTCAAATCCCAATGGCTCCATCAAGTTGCTCTCAACGGATCTCACCCATTTATTGAAAAATAATGGAGTTTGTCCCACTGGGCACTGGGGGGGCCATTCAACATCATCTTTCTAACTCTCTCCTTTATCCATTGGATCTCAACAATCAAATCCTCACTCCCCTTCTTCTACTCTAATCTAGGGCTGATTTCCATCCTCCCTCTCCTAATGCTGACCTCGCCGCGCCTCCTTCCCTTCTTCCTCCTCCTCTGCGCCGCCGTCTCCCTCTTCACCGTTTCCGCCACCGACCATATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAATAACCACACCTTCTACGTTGGCGACCTCATCTGTAAGTTATAA ATGAAGCACTATGCGCAACGCCCCAACCAGAGAACATCAGATAGGGAGACATCACAGCTCTCAGAAGGGCGTCGCAACGTCGTGATGGGGCTGATTTCCATCCTCCCTCTCCTAATGCTGACCTCGCCGCGCCTCCTTCCCTTCTTCCTCCTCCTCTGCGCCGCCGTCTCCCTCTTCACCGTTTCCGCCACCGACCATATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAATAACCACACCTTCTACGTTGGCGACCTCATCTGTAAGTTATAA ATGAAGCACTATGCGCAACGCCCCAACCAGAGAACATCAGATAGGGAGACATCACAGCTCTCAGAAGGGCGTCGCAACGTCGTGATGGGGCTGATTTCCATCCTCCCTCTCCTAATGCTGACCTCGCCGCGCCTCCTTCCCTTCTTCCTCCTCCTCTGCGCCGCCGTCTCCCTCTTCACCGTTTCCGCCACCGACCATATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAATAACCACACCTTCTACGTTGGCGACCTCATCTGTAAGTTATAA MKHYAQRPNQRTSDRETSQLSEGRRNVVMGLISILPLLMLTSPRLLPFFLLLCAAVSLFTVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLICKL* Homology
BLAST of Chy4G080540 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.5e-04 Identity = 23/53 (43.40%), Postives = 30/53 (56.60%), Query Frame = 0
BLAST of Chy4G080540 vs. ExPASy TrEMBL
Match: A0A0A0LCI9 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G710810 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 6.5e-24 Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0
BLAST of Chy4G080540 vs. ExPASy TrEMBL
Match: A0A1S3CN34 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103502815 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 9.4e-23 Identity = 54/57 (94.74%), Postives = 54/57 (94.74%), Query Frame = 0
BLAST of Chy4G080540 vs. ExPASy TrEMBL
Match: A0A6J1F2R0 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111441613 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.2e-19 Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0
BLAST of Chy4G080540 vs. ExPASy TrEMBL
Match: A0A6J1J7T1 (lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482049 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.7e-19 Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0
BLAST of Chy4G080540 vs. ExPASy TrEMBL
Match: A0A6S7M4H5 (Phytocyanin domain-containing protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS7864 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 9.4e-15 Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = 0
BLAST of Chy4G080540 vs. NCBI nr
Match: XP_004137655.1 (mavicyanin [Cucumis sativus] >KGN58654.1 hypothetical protein Csa_001798 [Cucumis sativus]) HSP 1 Score: 120 bits (300), Expect = 5.63e-32 Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0
BLAST of Chy4G080540 vs. NCBI nr
Match: XP_008465137.1 (PREDICTED: lamin-like protein [Cucumis melo]) HSP 1 Score: 116 bits (290), Expect = 1.84e-30 Identity = 54/57 (94.74%), Postives = 54/57 (94.74%), Query Frame = 0
BLAST of Chy4G080540 vs. NCBI nr
Match: XP_038903873.1 (lamin-like protein [Benincasa hispida]) HSP 1 Score: 109 bits (272), Expect = 9.96e-28 Identity = 50/54 (92.59%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of Chy4G080540 vs. NCBI nr
Match: XP_022934432.1 (lamin-like protein [Cucurbita moschata]) HSP 1 Score: 105 bits (261), Expect = 4.45e-26 Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0
BLAST of Chy4G080540 vs. NCBI nr
Match: KAG6581622.1 (Lamin-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 105 bits (261), Expect = 4.45e-26 Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0
BLAST of Chy4G080540 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 ) HSP 1 Score: 47.4 bits (111), Expect = 7.9e-06 Identity = 21/44 (47.73%), Postives = 26/44 (59.09%), Query Frame = 0
BLAST of Chy4G080540 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 ) HSP 1 Score: 47.0 bits (110), Expect = 1.0e-05 Identity = 23/53 (43.40%), Postives = 30/53 (56.60%), Query Frame = 0
BLAST of Chy4G080540 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 ) HSP 1 Score: 43.9 bits (102), Expect = 8.7e-05 Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 0
BLAST of Chy4G080540 vs. TAIR 10
Match: AT3G17675.1 (Cupredoxin superfamily protein ) HSP 1 Score: 41.2 bits (95), Expect = 5.7e-04 Identity = 15/32 (46.88%), Postives = 20/32 (62.50%), Query Frame = 0
BLAST of Chy4G080540 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein ) HSP 1 Score: 40.4 bits (93), Expect = 9.7e-04 Identity = 22/55 (40.00%), Postives = 29/55 (52.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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