Chy4G080010 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAAGCCGGAGGCAGTTCTTGGGAAAGAGAATGCTGAGAAGAACAAATACCGTAAAGGCCTGTGGTCCCCGGAGGAGGATGAGAAGCTAATGAGGTATATGTTGAACAATGGGCAGGGCTGTTGGAGTGACATTGCTAAGAATGCAGGGCTTCAGAGATGTGGGAAGAGTTGTCGTCTTCGTTGGATTAATTATCTTAGGCCTGACCTTAAACGCGGAGCTTTCTCTCCTCAGGAAGAAGAGCTTATTGTTCATTTGCATTCCCTTATTGGCAACAGGTCCTCTCTCTCACTCTCTCTCCTTAATTCCTTTTCTTGATACCGAATTGAGATCAGTTTCAAATGAGTTTTTTTTTGGATGAAGAATCATTTCATTCCCAACATTCATGAACCTGATCTCATACTTGTTATCATATGTGTTGACCTTAAAAGTCATGGGTTTAATGTGATATGATTATTTGCTTTATATGTTTTAAACAGGGACATAGCATGGGTATATGTCATATTACATAG ATGAGGAAGCCGGAGGCAGTTCTTGGGAAAGAGAATGCTGAGAAGAACAAATACCGTAAAGGCCTGTGGTCCCCGGAGGAGGATGAGAAGCTAATGAGGTATATGTTGAACAATGGGCAGGGCTGTTGGAGTGACATTGCTAAGAATGCAGGGCTTCAGAGATGTGGGAAGAGTTGTCGTCTTCGTTGGATTAATTATCTTAGGCCTGACCTTAAACGCGGAGCTTTCTCTCCTCAGGAAGAAGAGCTTATTAATCATTTCATTCCCAACATTCATGAACCTGATCTCATACTTGTTATCATATGTGTTGACCTTAAAAGTCATGGGTTTAATGGACATAGCATGGGTATATGTCATATTACATAG ATGAGGAAGCCGGAGGCAGTTCTTGGGAAAGAGAATGCTGAGAAGAACAAATACCGTAAAGGCCTGTGGTCCCCGGAGGAGGATGAGAAGCTAATGAGGTATATGTTGAACAATGGGCAGGGCTGTTGGAGTGACATTGCTAAGAATGCAGGGCTTCAGAGATGTGGGAAGAGTTGTCGTCTTCGTTGGATTAATTATCTTAGGCCTGACCTTAAACGCGGAGCTTTCTCTCCTCAGGAAGAAGAGCTTATTAATCATTTCATTCCCAACATTCATGAACCTGATCTCATACTTGTTATCATATGTGTTGACCTTAAAAGTCATGGGTTTAATGGACATAGCATGGGTATATGTCATATTACATAG MRKPEAVLGKENAEKNKYRKGLWSPEEDEKLMRYMLNNGQGCWSDIAKNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELINHFIPNIHEPDLILVIICVDLKSHGFNGHSMGICHIT* Homology
BLAST of Chy4G080010 vs. ExPASy Swiss-Prot
Match: Q9LXV2 (Transcription factor MYB46 OS=Arabidopsis thaliana OX=3702 GN=MYB46 PE=2 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 1.5e-35 Identity = 67/87 (77.01%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of Chy4G080010 vs. ExPASy Swiss-Prot
Match: Q9C6U1 (Transcription factor MYB83 OS=Arabidopsis thaliana OX=3702 GN=MYB83 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 5.3e-33 Identity = 66/84 (78.57%), Postives = 71/84 (84.52%), Query Frame = 0
BLAST of Chy4G080010 vs. ExPASy Swiss-Prot
Match: Q8VZQ2 (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 4.0e-28 Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of Chy4G080010 vs. ExPASy Swiss-Prot
Match: Q8LPH6 (Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 5.7e-27 Identity = 54/70 (77.14%), Postives = 58/70 (82.86%), Query Frame = 0
BLAST of Chy4G080010 vs. ExPASy Swiss-Prot
Match: Q9SPG3 (Transcription factor MYB26 OS=Arabidopsis thaliana OX=3702 GN=MYB26 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 3.5e-24 Identity = 52/79 (65.82%), Postives = 60/79 (75.95%), Query Frame = 0
BLAST of Chy4G080010 vs. ExPASy TrEMBL
Match: A0A5D3BPM7 (Transcription factor MYB46-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00120 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.3e-42 Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Chy4G080010 vs. ExPASy TrEMBL
Match: A0A1S3CFJ0 (transcription factor MYB46-like OS=Cucumis melo OX=3656 GN=LOC103500311 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.3e-42 Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Chy4G080010 vs. ExPASy TrEMBL
Match: A0A6J1J9A9 (transcription factor MYB46-like OS=Cucurbita maxima OX=3661 GN=LOC111482449 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.5e-41 Identity = 82/86 (95.35%), Postives = 83/86 (96.51%), Query Frame = 0
BLAST of Chy4G080010 vs. ExPASy TrEMBL
Match: A0A6J1F2I1 (myb-related protein 305-like OS=Cucurbita moschata OX=3662 GN=LOC111441550 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.5e-41 Identity = 82/86 (95.35%), Postives = 83/86 (96.51%), Query Frame = 0
BLAST of Chy4G080010 vs. ExPASy TrEMBL
Match: A0A6J1KCL7 (transcription factor MYB46-like OS=Cucurbita maxima OX=3661 GN=LOC111493095 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 9.4e-41 Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = 0
BLAST of Chy4G080010 vs. NCBI nr
Match: XP_004149614.1 (transcription factor MYB46 [Cucumis sativus] >XP_031737713.1 transcription factor MYB46 [Cucumis sativus] >KAE8650933.1 hypothetical protein Csa_001273 [Cucumis sativus]) HSP 1 Score: 182 bits (461), Expect = 3.71e-54 Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Chy4G080010 vs. NCBI nr
Match: XP_008461794.1 (PREDICTED: transcription factor MYB46-like [Cucumis melo] >KAA0048349.1 transcription factor MYB46-like [Cucumis melo var. makuwa] >TYK01115.1 transcription factor MYB46-like [Cucumis melo var. makuwa]) HSP 1 Score: 182 bits (461), Expect = 3.71e-54 Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Chy4G080010 vs. NCBI nr
Match: XP_038905632.1 (transcription factor MYB46-like [Benincasa hispida]) HSP 1 Score: 182 bits (461), Expect = 4.13e-54 Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Chy4G080010 vs. NCBI nr
Match: XP_022983998.1 (transcription factor MYB46-like [Cucurbita maxima]) HSP 1 Score: 177 bits (450), Expect = 1.87e-52 Identity = 82/86 (95.35%), Postives = 83/86 (96.51%), Query Frame = 0
BLAST of Chy4G080010 vs. NCBI nr
Match: XP_023527101.1 (transcription factor MYB46-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 177 bits (450), Expect = 1.97e-52 Identity = 82/86 (95.35%), Postives = 83/86 (96.51%), Query Frame = 0
BLAST of Chy4G080010 vs. TAIR 10
Match: AT5G12870.1 (myb domain protein 46 ) HSP 1 Score: 150.2 bits (378), Expect = 1.1e-36 Identity = 67/87 (77.01%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of Chy4G080010 vs. TAIR 10
Match: AT3G08500.1 (myb domain protein 83 ) HSP 1 Score: 141.7 bits (356), Expect = 3.8e-34 Identity = 66/84 (78.57%), Postives = 71/84 (84.52%), Query Frame = 0
BLAST of Chy4G080010 vs. TAIR 10
Match: AT1G09540.1 (myb domain protein 61 ) HSP 1 Score: 125.6 bits (314), Expect = 2.8e-29 Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of Chy4G080010 vs. TAIR 10
Match: AT4G01680.1 (myb domain protein 55 ) HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28 Identity = 55/70 (78.57%), Postives = 58/70 (82.86%), Query Frame = 0
BLAST of Chy4G080010 vs. TAIR 10
Match: AT4G01680.3 (myb domain protein 55 ) HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28 Identity = 55/70 (78.57%), Postives = 58/70 (82.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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