Chy4G078580 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G078580
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	rop guanine nucleotide exchange factor 12-like
Location	chrH04: 17539267 .. 17540508 (-)
RNA-Seq Expression	Chy4G078580
Synteny	Chy4G078580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTACGAGAAATGGAACAAGATGAAGAGAATTACAGGTCCAAATTGTTCCATTTCAAAGCAATGCAGGAGAATAATAATGCAACCAAACACTCCAAAAGCTTGAGCATGGAGAGTGCAAGTGTCCTGTTTTCTTCAGATAATAATGATTTGTTTTCCAACAGAAGTCAGGGATCGACTCCGACAAGCGATAACATTTCAGACAAACCTCCTATGAATCGACAAGACAAAGGGCCTAAAGCTAAGCTTTCCAGAGATGATGCTGCAACCAAACAGCCTAAAGATCAGCCACCAACAGGTTCTCAAATATATATATATATTTTTCCTGTTTTTGGAATGTTTGATGATGTTTGGAGTGGAGATTTTGATTCACATGATTTTGAGAAAAGGATAATGGGCATCCTAGAGAAGTATTTGAATTGATAAACTATAGCTTTTTACTACTCAAATGAGTTGTGAACATCATTATTGATATTTTTATTCATATGGTTGACATTTTCATTACATCTCGGAAAGAGAATTTTCTCAACGTTTCAATGTCGAATCCTGAAATTAAACTCAGAAATGGATTTGAGCCATTTAATTGCATATGCAAAGTCAACCTATATTATTGTTTGCAGCATTTTTGTTTTGTATGAATTAAAAGACCATTCTTGAGCTTGGTTTGAAAATTTTCTGTTCTTGGATATGATCAGAAATAGAACAGATGAAGGAGCGGTTTGCTAAGTTGCTTTTGGGTGAAGATATGTCTGGTGGAGGAAAGGGTGTTTCATCGGCTTTAGCATTGTCGAATGCAATTACAAATCTTGCAGGTATGTCGTCGTGTATTGATCTTCTGTTTTCTGTCGAGACTTACAATGACTTTGGTTTTACTGTGTTTTCGTCTAGATGTTGTTAAAGGAAGAAATTCTGTAATTACAAACAGAATTCAGGGCAAAATCTTAACAAGTTTTCTAGTTGAATCTAGGGAGATTGTCAAGAGATGATCTTTTTTCATCTTTCTCCTATCATTTTGTAGCTTCTGTGTTTGGGGAACAATGGCGTCTTGAGCCAATGTCAGTAGAGCGAAAAGCAAGGTGGAGAAAAGAGATTGATTTGCTATTATCAGTCACTGATTACATAGTTGAATTTGTTCCTTCCCAACAGAAATCTAAGGATGGAACAAACATGGAGGCAACAATCTCTCTCTCTCTCTCTTTCTCTGACTTCAAAACAAAAACAAGCAGAAGTGCAAGAAGATGA

mRNA sequence

ATGGTACGAGAAATGGAACAAGATGAAGAGAATTACAGGTCCAAATTGTTCCATTTCAAAGCAATGCAGGAGAATAATAATGCAACCAAACACTCCAAAAGCTTGAGCATGGAGAGTGCAAGTGTCCTGTTTTCTTCAGATAATAATGATTTGTTTTCCAACAGAAGTCAGGGATCGACTCCGACAAGCGATAACATTTCAGACAAACCTCCTATGAATCGACAAGACAAAGGGCCTAAAGCTAAGCTTTCCAGAGATGATGCTGCAACCAAACAGCCTAAAGATCAGCCACCAACAGAAATAGAACAGATGAAGGAGCGGTTTGCTAAGTTGCTTTTGGGTGAAGATATGTCTGGTGGAGGAAAGGGTGTTTCATCGGCTTTAGCATTGTCGAATGCAATTACAAATCTTGCAGCTTCTGTGTTTGGGGAACAATGGCGTCTTGAGCCAATGTCAGTAGAGCGAAAAGCAAGGTGGAGAAAAGAGATTGATTTGCTATTATCAGTCACTGATTACATAGTTGAATTTGTTCCTTCCCAACAGAAATCTAAGGATGGAACAAACATGGAGGCAACAATCTCTCTCTCTCTCTCTTTCTCTGACTTCAAAACAAAAACAAGCAGAAGTGCAAGAAGATGA

Coding sequence (CDS)

ATGGTACGAGAAATGGAACAAGATGAAGAGAATTACAGGTCCAAATTGTTCCATTTCAAAGCAATGCAGGAGAATAATAATGCAACCAAACACTCCAAAAGCTTGAGCATGGAGAGTGCAAGTGTCCTGTTTTCTTCAGATAATAATGATTTGTTTTCCAACAGAAGTCAGGGATCGACTCCGACAAGCGATAACATTTCAGACAAACCTCCTATGAATCGACAAGACAAAGGGCCTAAAGCTAAGCTTTCCAGAGATGATGCTGCAACCAAACAGCCTAAAGATCAGCCACCAACAGAAATAGAACAGATGAAGGAGCGGTTTGCTAAGTTGCTTTTGGGTGAAGATATGTCTGGTGGAGGAAAGGGTGTTTCATCGGCTTTAGCATTGTCGAATGCAATTACAAATCTTGCAGCTTCTGTGTTTGGGGAACAATGGCGTCTTGAGCCAATGTCAGTAGAGCGAAAAGCAAGGTGGAGAAAAGAGATTGATTTGCTATTATCAGTCACTGATTACATAGTTGAATTTGTTCCTTCCCAACAGAAATCTAAGGATGGAACAAACATGGAGGCAACAATCTCTCTCTCTCTCTCTTTCTCTGACTTCAAAACAAAAACAAGCAGAAGTGCAAGAAGATGA

Protein sequence

MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGSTPTSDNISDKPPMNRQDKGPKAKLSRDDAATKQPKDQPPTEIEQMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNMEATISLSLSFSDFKTKTSRSARR*

Homology

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BLAST of Chy4G078580 vs. ExPASy Swiss-Prot
Match: Q9CA89 (Rop guanine nucleotide exchange factor 12 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF12 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 8.1e-45
Identity = 114/193 (59.07%), Postives = 141/193 (73.06%), Query Frame = 0


Query: 1   MVREMEQDEENYRSKLFHFK-AMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGS 60
           MVR  EQ++E YRS+LF+FK    +NN+AT+H+KSLS+E+     ++ ++D         
Sbjct: 1   MVRASEQEQETYRSRLFNFKWRNNDNNSATRHNKSLSVETGLDEAATGSHD-------AE 60

Query: 61  TPTSDNISDKPPMNRQ--DKGPKAKLSRDDAATKQPKDQPPTEIEQMKERFAKLLLGEDM 120
             T  + S  PP++R   D+   A L    AA++  + Q   ++EQMKERF+KLLLGED 
Sbjct: 61  PLTIIHPSQGPPLSRSAADEAVLAAL----AASQARERQLLADMEQMKERFSKLLLGEDN 120

Query: 121 SGGGKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFV 180
           SGGGKGVSSALALSNAITNLAASVFGEQ RLEPM  ER+ARWRKEID LLSVTDY+VEF 
Sbjct: 121 SGGGKGVSSALALSNAITNLAASVFGEQRRLEPMPAERRARWRKEIDWLLSVTDYVVEFA 180

Query: 181 PSQQKSKDGTNME 191
           PSQQK+KDGTNME
Sbjct: 181 PSQQKNKDGTNME 182

[Close]

BLAST of Chy4G078580 vs. ExPASy Swiss-Prot
Match: Q9M811 (Rop guanine nucleotide exchange factor 11 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF11 PE=1 SV=2)

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-42
Identity = 112/202 (55.45%), Postives = 137/202 (67.82%), Query Frame = 0


Query: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDN-----NDLFSNR 60
           MV+ MEQ++E Y+S+LFHFK M E N+A++H KS S + A  +  SDN     ND+   R
Sbjct: 1   MVKAMEQEQETYKSRLFHFKNMNE-NSASRHVKSWSSDCAMRMDGSDNLDDDDNDMMMFR 60

Query: 61  SQGSTPTSDNISDKPPM-------NRQDKGPKAKLSRDDAATKQPKDQPPTEIEQMKERF 120
           SQ   P      D+P +       NR DK P+   S    A    +      +EQMKE+F
Sbjct: 61  SQ---PGKCGSVDRPSLPIGGVTPNRNDKLPRVSSSDSMEALIILQ----AAMEQMKEKF 120

Query: 121 AKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLS 180
           +KLLLGEDMSGGGKGVSSALALSNAITNLAAS FGEQ RLEPM+V+RK RWR+EI  L+S
Sbjct: 121 SKLLLGEDMSGGGKGVSSALALSNAITNLAASAFGEQRRLEPMAVDRKTRWRREIGWLIS 180

Query: 181 VTDYIVEFVPSQQKSKDGTNME 191
           V DYIVEF P+QQ +KDGT+ME
Sbjct: 181 VADYIVEFAPTQQTNKDGTSME 194

[Close]

BLAST of Chy4G078580 vs. ExPASy Swiss-Prot
Match: Q9LV40 (Rho guanine nucleotide exchange factor 8 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF8 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.6e-32
Identity = 91/183 (49.73%), Postives = 125/183 (68.31%), Query Frame = 0


Query: 14  SKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGSTPTSDNISDKPPMN 73
           SK F+FK M + +++TK  +S ++    V+ + D++ + SN  +  +  SD+  + P   
Sbjct: 12  SKSFNFKRMFD-SSSTKQQQSQTI----VVENGDSHIVESNTPE--SQNSDSFVESP--- 71

Query: 74  RQDKGPKAKLSRDDAATKQPK--DQPPTEIEQMKERFAKLLLGEDMSGGGKGVSSALALS 133
                 ++ L      T+  K  ++   ++E MK+RFAKLLLGEDMSGGGKGVSSALALS
Sbjct: 72  -----VESSLPMISPLTRPGKRSERQQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALS 131

Query: 134 NAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNMEA 193
           NAITNLAAS+FGEQ +L+PM  +R+ARW+KEID LLSVTD+IVEFVPSQQ SKDG   E 
Sbjct: 132 NAITNLAASIFGEQTKLQPMPQDRQARWKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEI 179

Query: 194 TIS 195
            ++
Sbjct: 192 MVT 179

[Close]

BLAST of Chy4G078580 vs. ExPASy Swiss-Prot
Match: Q9SVQ3 (Rop guanine nucleotide exchange factor 9 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF9 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.8e-31
Identity = 86/165 (52.12%), Postives = 110/165 (66.67%), Query Frame = 0


Query: 36  SMESASVLFSSDNNDLFSNRSQGSTPTSDNISD--KPPMNRQDK--GPKAKLSR--DDAA 95
           S+E    + SS N D   + S G      ++++   P    QD   G   + SR      
Sbjct: 4   SLERGISITSSFNLDRMFDSSPGKEQQQPHLAETTMPESQTQDSLGGSPVETSRPMTSRL 63

Query: 96  TKQPKDQPPTEIEQMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWRLE 155
             + +D+  +E E MK+RF KLLLGEDMSGGGKGVSSALALSNAITNLAAS+FGEQ +L+
Sbjct: 64  ISRRQDKQQSETEMMKDRFTKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQ 123

Query: 156 PMSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNMEATIS 195
           PM+ +R+ARW+KEID LLSVTD+IVEFVPSQQ SK+G   E  ++
Sbjct: 124 PMAPDRRARWKKEIDWLLSVTDHIVEFVPSQQISKEGVCTEIMVT 168

[Close]

BLAST of Chy4G078580 vs. ExPASy Swiss-Prot
Match: F4J1G1 (Rop guanine nucleotide exchange factor 13 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF13 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.2e-29
Identity = 93/218 (42.66%), Postives = 130/218 (59.63%), Query Frame = 0


Query: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNND--LFSNRSQG 60
           MV+  E++ E Y+ KLF  + +++ N++++H K  + +SA  +   D +D  +F   +  
Sbjct: 1   MVKASEKEHEKYKPKLFDLENVKKKNSSSRHFKRWNSDSALRIEDPDIDDGTVFKKTATS 60

Query: 61  STPTSDNI--SDKPPMNRQ--------DKGPKAKLSRDDAATKQPKDQP----------- 120
           S      +   D+ P  R+        D G +  +S      K  +DQ            
Sbjct: 61  SIQPILPVLAMDEQPQPREATDEESQKDSGKREIISFLGYNEKFTRDQVILRFRGLQAKS 120

Query: 121 -----PTEIEQMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWRLEPMS 180
                 TE+EQMK++FAKLLLGEDMSGG KGVSSALALSNAITNLAAS FGE  RLE +S
Sbjct: 121 CYFAYVTELEQMKDKFAKLLLGEDMSGGSKGVSSALALSNAITNLAASAFGEIRRLEAIS 180

Query: 181 VERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNME 191
            ++K RWR+EI  LLSVTD+IVEF P+ Q ++DG++ME
Sbjct: 181 EDKKERWRREIGWLLSVTDHIVEFSPTHQTNEDGSSME 218

[Close]

BLAST of Chy4G078580 vs. ExPASy TrEMBL
Match: A0A1S3BII1 (rop guanine nucleotide exchange factor 12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489945 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.2e-93
Identity = 185/194 (95.36%), Postives = 190/194 (97.94%), Query Frame = 0


Query: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST 60
           MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST
Sbjct: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST 60

Query: 61  PTSDNISDKPPMNRQDKGPKAKLSRDDAATKQPKDQPPTEIEQMKERFAKLLLGEDMSGG 120
           P SDNI++KPPM+RQDKGPKAKLSRDDAA KQPKDQPPTEIEQMKERFAKLLLGEDMSGG
Sbjct: 61  PISDNIAEKPPMSRQDKGPKAKLSRDDAAIKQPKDQPPTEIEQMKERFAKLLLGEDMSGG 120

Query: 121 GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ 180
           GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ
Sbjct: 121 GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ 180

Query: 181 QKSKDGTNMEATIS 195
           QKSKDGTNME  ++
Sbjct: 181 QKSKDGTNMEIMVT 194

[Close]

BLAST of Chy4G078580 vs. ExPASy TrEMBL
Match: A0A5A7U6A7 (Rop guanine nucleotide exchange factor 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G00390 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.7e-85
Identity = 172/185 (92.97%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST 60
           MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST
Sbjct: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST 60

Query: 61  PTSDNISDKPPMNRQDKGPKAKLSRDDAATKQPKDQPPTEIEQMKERFAKLLLGEDMSGG 120
           P SDNI++KPPM+RQDKGPKAKLSRDDAA KQPKDQPPTEIEQMKERFAKLLLGEDMSGG
Sbjct: 61  PISDNIAEKPPMSRQDKGPKAKLSRDDAAIKQPKDQPPTEIEQMKERFAKLLLGEDMSGG 120

Query: 121 GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ 180
           GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEF+   
Sbjct: 121 GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFIMVT 180

Query: 181 QKSKD 186
           ++  D
Sbjct: 181 RQRND 185

[Close]

BLAST of Chy4G078580 vs. ExPASy TrEMBL
Match: A0A5D3CBI9 (Rop guanine nucleotide exchange factor 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G001010 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.1e-83
Identity = 168/181 (92.82%), Postives = 174/181 (96.13%), Query Frame = 0


Query: 5   MEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGSTPTSD 64
           MEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGSTP SD
Sbjct: 1   MEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGSTPISD 60

Query: 65  NISDKPPMNRQDKGPKAKLSRDDAATKQPKDQPPTEIEQMKERFAKLLLGEDMSGGGKGV 124
           NI++KPPM+RQDKGPKAKLSRDDAA KQPKDQPPTEIEQMKERFAKLLLGEDMSGGGKGV
Sbjct: 61  NIAEKPPMSRQDKGPKAKLSRDDAAIKQPKDQPPTEIEQMKERFAKLLLGEDMSGGGKGV 120

Query: 125 SSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSK 184
           SSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEF+   ++  
Sbjct: 121 SSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFIMVTRQRN 180

Query: 185 D 186
           D
Sbjct: 181 D 181

[Close]

BLAST of Chy4G078580 vs. ExPASy TrEMBL
Match: A0A1S3BH13 (rop guanine nucleotide exchange factor 12-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489945 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.3e-64
Identity = 143/194 (73.71%), Postives = 148/194 (76.29%), Query Frame = 0


Query: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST 60
           MVREMEQDEENY                                          RSQGST
Sbjct: 1   MVREMEQDEENY------------------------------------------RSQGST 60

Query: 61  PTSDNISDKPPMNRQDKGPKAKLSRDDAATKQPKDQPPTEIEQMKERFAKLLLGEDMSGG 120
           P SDNI++KPPM+RQDKGPKAKLSRDDAA KQPKDQPPTEIEQMKERFAKLLLGEDMSGG
Sbjct: 61  PISDNIAEKPPMSRQDKGPKAKLSRDDAAIKQPKDQPPTEIEQMKERFAKLLLGEDMSGG 120

Query: 121 GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ 180
           GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ
Sbjct: 121 GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ 152

Query: 181 QKSKDGTNMEATIS 195
           QKSKDGTNME  ++
Sbjct: 181 QKSKDGTNMEIMVT 152

[Close]

BLAST of Chy4G078580 vs. ExPASy TrEMBL
Match: A0A6J1HL16 (rop guanine nucleotide exchange factor 12-like OS=Cucurbita moschata OX=3662 GN=LOC111464520 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.3e-58
Identity = 137/198 (69.19%), Postives = 162/198 (81.82%), Query Frame = 0


Query: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST 60
           M+  MEQ+ E ++SKL HFK   EN+   +H+KSLS+ESAS+L S  + D  ++RSQGST
Sbjct: 1   MIHAMEQEHEGFKSKLCHFKGTHENSG--RHAKSLSIESASMLDSLVDED--TSRSQGST 60

Query: 61  PTSDNISDKP--PMNRQDKGPKAKLSRD-DAAT-KQPKDQPPTEIEQMKERFAKLLLGED 120
           P  +N ++KP  P NR +K  K KL++D DA T K+P+D+   E+EQMKERFAKLLLGED
Sbjct: 61  PVHNNSAEKPLTPTNRPEKSLKLKLTKDEDAVTEKEPRDKKALEMEQMKERFAKLLLGED 120

Query: 121 MSGGGKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEF 180
           MSGGGKGVSSALALSNAITNLAASVFGEQWRLEPMS+ERK RWRKEIDLLLSVTDYIVEF
Sbjct: 121 MSGGGKGVSSALALSNAITNLAASVFGEQWRLEPMSLERKTRWRKEIDLLLSVTDYIVEF 180

Query: 181 VPSQQKSKDGTNMEATIS 195
           VPSQQKSKDGTNME  ++
Sbjct: 181 VPSQQKSKDGTNMEIMVT 194

[Close]

BLAST of Chy4G078580 vs. NCBI nr
Match: XP_011651499.1 (rop guanine nucleotide exchange factor 12 isoform X1 [Cucumis sativus] >KAE8650730.1 hypothetical protein Csa_023418 [Cucumis sativus])

HSP 1 Score: 352 bits (903), Expect = 2.99e-116
Identity = 187/193 (96.89%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST 60
           MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST
Sbjct: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST 60

Query: 61  PTSDNISDKPPMNRQDKGPKAKLSRDDAATKQPKDQPPTEIEQMKERFAKLLLGEDMSGG 120
           PTSDN+SDKPPMNRQDKGPKAKLSRDDAA KQPKDQPPTE EQMKERFAKLLLGEDMSGG
Sbjct: 61  PTSDNVSDKPPMNRQDKGPKAKLSRDDAAIKQPKDQPPTETEQMKERFAKLLLGEDMSGG 120

Query: 121 GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ 180
           GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ
Sbjct: 121 GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ 180

Query: 181 QKSKDGTNMEATI 193
           QKSKDGTNME  +
Sbjct: 181 QKSKDGTNMEIMV 193

[Close]

BLAST of Chy4G078580 vs. NCBI nr
Match: XP_008447513.1 (PREDICTED: rop guanine nucleotide exchange factor 12-like isoform X1 [Cucumis melo])

HSP 1 Score: 347 bits (891), Expect = 1.93e-114
Identity = 185/193 (95.85%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST 60
           MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST
Sbjct: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST 60

Query: 61  PTSDNISDKPPMNRQDKGPKAKLSRDDAATKQPKDQPPTEIEQMKERFAKLLLGEDMSGG 120
           P SDNI++KPPM+RQDKGPKAKLSRDDAA KQPKDQPPTEIEQMKERFAKLLLGEDMSGG
Sbjct: 61  PISDNIAEKPPMSRQDKGPKAKLSRDDAAIKQPKDQPPTEIEQMKERFAKLLLGEDMSGG 120

Query: 121 GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ 180
           GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ
Sbjct: 121 GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ 180

Query: 181 QKSKDGTNMEATI 193
           QKSKDGTNME  +
Sbjct: 181 QKSKDGTNMEIMV 193

[Close]

BLAST of Chy4G078580 vs. NCBI nr
Match: XP_038902752.1 (rop guanine nucleotide exchange factor 12-like [Benincasa hispida])

HSP 1 Score: 335 bits (859), Expect = 1.28e-109
Identity = 179/193 (92.75%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST 60
           MVREMEQDEENYRSKLF+FKA QENNNATKHSKSLSMESA+VLFSSDNN LFSNR+QGST
Sbjct: 1   MVREMEQDEENYRSKLFNFKAFQENNNATKHSKSLSMESATVLFSSDNNYLFSNRNQGST 60

Query: 61  PTSDNISDKPPMNRQDKGPKAKLSRDDAATKQPKDQPPTEIEQMKERFAKLLLGEDMSGG 120
           P +D ISDKPP NRQDKGPKAK+SRDDAA KQPKDQPPTEIEQMKERFAKLLLGEDMSGG
Sbjct: 61  PVNDTISDKPPTNRQDKGPKAKVSRDDAAIKQPKDQPPTEIEQMKERFAKLLLGEDMSGG 120

Query: 121 GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ 180
           GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ
Sbjct: 121 GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ 180

Query: 181 QKSKDGTNMEATI 193
           QKSKDGTNME  +
Sbjct: 181 QKSKDGTNMEIMV 193

[Close]

BLAST of Chy4G078580 vs. NCBI nr
Match: KAA0050788.1 (rop guanine nucleotide exchange factor 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 321 bits (822), Expect = 3.22e-104
Identity = 172/185 (92.97%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST 60
           MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST
Sbjct: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGST 60

Query: 61  PTSDNISDKPPMNRQDKGPKAKLSRDDAATKQPKDQPPTEIEQMKERFAKLLLGEDMSGG 120
           P SDNI++KPPM+RQDKGPKAKLSRDDAA KQPKDQPPTEIEQMKERFAKLLLGEDMSGG
Sbjct: 61  PISDNIAEKPPMSRQDKGPKAKLSRDDAAIKQPKDQPPTEIEQMKERFAKLLLGEDMSGG 120

Query: 121 GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQ 180
           GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEF+   
Sbjct: 121 GKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFIMVT 180

Query: 181 QKSKD 185
           ++  D
Sbjct: 181 RQRND 185

[Close]

BLAST of Chy4G078580 vs. NCBI nr
Match: TYK08558.1 (rop guanine nucleotide exchange factor 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 314 bits (804), Expect = 1.47e-101
Identity = 168/181 (92.82%), Postives = 174/181 (96.13%), Query Frame = 0


Query: 5   MEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGSTPTSD 64
           MEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGSTP SD
Sbjct: 1   MEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGSTPISD 60

Query: 65  NISDKPPMNRQDKGPKAKLSRDDAATKQPKDQPPTEIEQMKERFAKLLLGEDMSGGGKGV 124
           NI++KPPM+RQDKGPKAKLSRDDAA KQPKDQPPTEIEQMKERFAKLLLGEDMSGGGKGV
Sbjct: 61  NIAEKPPMSRQDKGPKAKLSRDDAAIKQPKDQPPTEIEQMKERFAKLLLGEDMSGGGKGV 120

Query: 125 SSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSK 184
           SSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEF+   ++  
Sbjct: 121 SSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFIMVTRQRN 180

[Close]

BLAST of Chy4G078580 vs. TAIR 10
Match: AT1G79860.1 (RHO guanyl-nucleotide exchange factor 12 )

HSP 1 Score: 181.8 bits (460), Expect = 5.8e-46
Identity = 114/193 (59.07%), Postives = 141/193 (73.06%), Query Frame = 0


Query: 1   MVREMEQDEENYRSKLFHFK-AMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGS 60
           MVR  EQ++E YRS+LF+FK    +NN+AT+H+KSLS+E+     ++ ++D         
Sbjct: 1   MVRASEQEQETYRSRLFNFKWRNNDNNSATRHNKSLSVETGLDEAATGSHD-------AE 60

Query: 61  TPTSDNISDKPPMNRQ--DKGPKAKLSRDDAATKQPKDQPPTEIEQMKERFAKLLLGEDM 120
             T  + S  PP++R   D+   A L    AA++  + Q   ++EQMKERF+KLLLGED 
Sbjct: 61  PLTIIHPSQGPPLSRSAADEAVLAAL----AASQARERQLLADMEQMKERFSKLLLGEDN 120

Query: 121 SGGGKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFV 180
           SGGGKGVSSALALSNAITNLAASVFGEQ RLEPM  ER+ARWRKEID LLSVTDY+VEF 
Sbjct: 121 SGGGKGVSSALALSNAITNLAASVFGEQRRLEPMPAERRARWRKEIDWLLSVTDYVVEFA 180

Query: 181 PSQQKSKDGTNME 191
           PSQQK+KDGTNME
Sbjct: 181 PSQQKNKDGTNME 182

[Close]

BLAST of Chy4G078580 vs. TAIR 10
Match: AT1G52240.1 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 149.4 bits (376), Expect = 3.2e-36
Identity = 98/184 (53.26%), Postives = 118/184 (64.13%), Query Frame = 0


Query: 19  FKAMQENNNATKHSKSLSMESASVLFSSDN-----NDLFSNRSQGSTPTSDNISDKPPM- 78
           F      N+A++H KS S + A  +  SDN     ND+   RSQ   P      D+P + 
Sbjct: 82  FNDNMNENSASRHVKSWSSDCAMRMDGSDNLDDDDNDMMMFRSQ---PGKCGSVDRPSLP 141

Query: 79  ------NRQDKGPKAKLSRDDAATKQPKDQPPTEIEQMKERFAKLLLGEDMSGGGKGVSS 138
                 NR DK P+   S    A    +      +EQMKE+F+KLLLGEDMSGGGKGVSS
Sbjct: 142 IGGVTPNRNDKLPRVSSSDSMEALIILQ----AAMEQMKEKFSKLLLGEDMSGGGKGVSS 201

Query: 139 ALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDG 191
           ALALSNAITNLAAS FGEQ RLEPM+V+RK RWR+EI  L+SV DYIVEF P+QQ +KDG
Sbjct: 202 ALALSNAITNLAASAFGEQRRLEPMAVDRKTRWRREIGWLISVADYIVEFAPTQQTNKDG 258

[Close]

BLAST of Chy4G078580 vs. TAIR 10
Match: AT3G24620.1 (RHO guanyl-nucleotide exchange factor 8 )

HSP 1 Score: 139.4 bits (350), Expect = 3.3e-33
Identity = 91/183 (49.73%), Postives = 125/183 (68.31%), Query Frame = 0


Query: 14  SKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNNDLFSNRSQGSTPTSDNISDKPPMN 73
           SK F+FK M + +++TK  +S ++    V+ + D++ + SN  +  +  SD+  + P   
Sbjct: 12  SKSFNFKRMFD-SSSTKQQQSQTI----VVENGDSHIVESNTPE--SQNSDSFVESP--- 71

Query: 74  RQDKGPKAKLSRDDAATKQPK--DQPPTEIEQMKERFAKLLLGEDMSGGGKGVSSALALS 133
                 ++ L      T+  K  ++   ++E MK+RFAKLLLGEDMSGGGKGVSSALALS
Sbjct: 72  -----VESSLPMISPLTRPGKRSERQQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALS 131

Query: 134 NAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNMEA 193
           NAITNLAAS+FGEQ +L+PM  +R+ARW+KEID LLSVTD+IVEFVPSQQ SKDG   E 
Sbjct: 132 NAITNLAASIFGEQTKLQPMPQDRQARWKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEI 179

Query: 194 TIS 195
            ++
Sbjct: 192 MVT 179

[Close]

BLAST of Chy4G078580 vs. TAIR 10
Match: AT4G13240.1 (RHO guanyl-nucleotide exchange factor 9 )

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-32
Identity = 86/165 (52.12%), Postives = 110/165 (66.67%), Query Frame = 0


Query: 36  SMESASVLFSSDNNDLFSNRSQGSTPTSDNISD--KPPMNRQDK--GPKAKLSR--DDAA 95
           S+E    + SS N D   + S G      ++++   P    QD   G   + SR      
Sbjct: 4   SLERGISITSSFNLDRMFDSSPGKEQQQPHLAETTMPESQTQDSLGGSPVETSRPMTSRL 63

Query: 96  TKQPKDQPPTEIEQMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWRLE 155
             + +D+  +E E MK+RF KLLLGEDMSGGGKGVSSALALSNAITNLAAS+FGEQ +L+
Sbjct: 64  ISRRQDKQQSETEMMKDRFTKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQ 123

Query: 156 PMSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNMEATIS 195
           PM+ +R+ARW+KEID LLSVTD+IVEFVPSQQ SK+G   E  ++
Sbjct: 124 PMAPDRRARWKKEIDWLLSVTDHIVEFVPSQQISKEGVCTEIMVT 168

[Close]

BLAST of Chy4G078580 vs. TAIR 10
Match: AT3G16130.1 (RHO guanyl-nucleotide exchange factor 13 )

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-30
Identity = 93/218 (42.66%), Postives = 130/218 (59.63%), Query Frame = 0


Query: 1   MVREMEQDEENYRSKLFHFKAMQENNNATKHSKSLSMESASVLFSSDNND--LFSNRSQG 60
           MV+  E++ E Y+ KLF  + +++ N++++H K  + +SA  +   D +D  +F   +  
Sbjct: 1   MVKASEKEHEKYKPKLFDLENVKKKNSSSRHFKRWNSDSALRIEDPDIDDGTVFKKTATS 60

Query: 61  STPTSDNI--SDKPPMNRQ--------DKGPKAKLSRDDAATKQPKDQP----------- 120
           S      +   D+ P  R+        D G +  +S      K  +DQ            
Sbjct: 61  SIQPILPVLAMDEQPQPREATDEESQKDSGKREIISFLGYNEKFTRDQVILRFRGLQAKS 120

Query: 121 -----PTEIEQMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWRLEPMS 180
                 TE+EQMK++FAKLLLGEDMSGG KGVSSALALSNAITNLAAS FGE  RLE +S
Sbjct: 121 CYFAYVTELEQMKDKFAKLLLGEDMSGGSKGVSSALALSNAITNLAASAFGEIRRLEAIS 180

Query: 181 VERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNME 191
            ++K RWR+EI  LLSVTD+IVEF P+ Q ++DG++ME
Sbjct: 181 EDKKERWRREIGWLLSVTDHIVEFSPTHQTNEDGSSME 218

The following BLAST results are available for this feature:

BLAST of Chy4G078580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA89	8.1e-45	59.07	Rop guanine nucleotide exchange factor 12 OS=Arabidopsis thaliana OX=3702 GN=ROP...	[more]
Q9M811	1.3e-42	55.45	Rop guanine nucleotide exchange factor 11 OS=Arabidopsis thaliana OX=3702 GN=ROP...	[more]
Q9LV40	4.6e-32	49.73	Rho guanine nucleotide exchange factor 8 OS=Arabidopsis thaliana OX=3702 GN=ROPG...	[more]
Q9SVQ3	1.8e-31	52.12	Rop guanine nucleotide exchange factor 9 OS=Arabidopsis thaliana OX=3702 GN=ROPG...	[more]
F4J1G1	2.2e-29	42.66	Rop guanine nucleotide exchange factor 13 OS=Arabidopsis thaliana OX=3702 GN=ROP...	[more]

BLAST of Chy4G078580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BII1	2.2e-93	95.36	rop guanine nucleotide exchange factor 12-like isoform X1 OS=Cucumis melo OX=365...	[more]
A0A5A7U6A7	1.7e-85	92.97	Rop guanine nucleotide exchange factor 12-like isoform X1 OS=Cucumis melo var. m...	[more]
A0A5D3CBI9	2.1e-83	92.82	Rop guanine nucleotide exchange factor 12-like isoform X1 OS=Cucumis melo var. m...	[more]
A0A1S3BH13	1.3e-64	73.71	rop guanine nucleotide exchange factor 12-like isoform X2 OS=Cucumis melo OX=365...	[more]
A0A6J1HL16	1.3e-58	69.19	rop guanine nucleotide exchange factor 12-like OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Chy4G078580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651499.1	2.99e-116	96.89	rop guanine nucleotide exchange factor 12 isoform X1 [Cucumis sativus] >KAE86507...	[more]
XP_008447513.1	1.93e-114	95.85	PREDICTED: rop guanine nucleotide exchange factor 12-like isoform X1 [Cucumis me...	[more]
XP_038902752.1	1.28e-109	92.75	rop guanine nucleotide exchange factor 12-like [Benincasa hispida]	[more]
KAA0050788.1	3.22e-104	92.97	rop guanine nucleotide exchange factor 12-like isoform X1 [Cucumis melo var. mak...	[more]
TYK08558.1	1.47e-101	92.82	rop guanine nucleotide exchange factor 12-like isoform X1 [Cucumis melo var. mak...	[more]

BLAST of Chy4G078580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79860.1	5.8e-46	59.07	RHO guanyl-nucleotide exchange factor 12	[more]
AT1G52240.1	3.2e-36	53.26	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G24620.1	3.3e-33	49.73	RHO guanyl-nucleotide exchange factor 8	[more]
AT4G13240.1	1.3e-32	52.12	RHO guanyl-nucleotide exchange factor 9	[more]
AT3G16130.1	1.5e-30	42.66	RHO guanyl-nucleotide exchange factor 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005512	PRONE domain	PFAM	PF03759	PRONE	coord: 100..193 e-value: 6.6E-49 score: 166.7
IPR005512	PRONE domain	PROSITE	PS51334	PRONE	coord: 91..212 score: 36.13295
None	No IPR available	GENE3D	1.20.58.2010	PRONE domain, subdomain 1	coord: 91..206 e-value: 3.2E-54 score: 185.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..69
None	No IPR available	PANTHER	PTHR33101:SF45	ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 11	coord: 6..191
IPR038937	Rop guanine nucleotide exchange factor	PANTHER	PTHR33101	ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1	coord: 6..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G078580.1	Chy4G078580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050790	regulation of catalytic activity
molecular_function	GO:0005085	guanyl-nucleotide exchange factor activity