Chy4G078060 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G078060
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Nucleolar protein 10
Location	chrH04: 16679814 .. 16682509 (-)
RNA-Seq Expression	Chy4G078060
Synteny	Chy4G078060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCTTCAGTTTTACATAAACGACAATGGTGATAAAGTCTACACCACAAAGGTTTTTCTTTCTTGTTTCTTCTTTTGCTCTTTGTGTTGAAGTTAATGGATATCATATCTTTTGAGTATTGGGGTTGTACTATTTTTGACAGCGTCTGCTGCGTATCAGATAAGCAGTGTTATATGGGGTCCTTGATTTTTAAGATAGTTAAAGATTGCCGAGTTAATGACCATCAGTTTTGGAGACTGGACTAGTTCTATTTGTGCTGACCTTCTTTAGAAACATAGGCTACCGTTATTAAGTGCGAGTAGTCTGTGTAGTTGCAATTAATTTATGTACCCATGAAATGATTGATTAAATCTATAGGATACCTTTGCTTAGAGTGTCTCAATTTTACAGGAAGTTTCTGTTAAGGCTTTGAGCTTTGTTCCAATAGCTTGTAATCCTCCCTTCTTTACTTTACCATATCACGATAGTAGTTTAGAATTCCCTTCGCCCGTTCCTTGACCATGAAGGAGTTTTAGATTTTAGGCTTTTGATGCCATTCTTTCGTTTACCAAGGATGCTCTTTCATTATCACGTGCCATTTTCTTGGGAAAACTGTAACAACCCGAATGTTTTATTGAATGTCATGGAAGTGATTAAACAAAACTAAGGTCAAGGATTCAATCCATTATGGCCACTCCTAGGAATTTCCTACGAGTTTTTTTGACACCCAAATGATAAAGGGTCAGGTGGGTTGTCCCTTACATTTGCTTGGTGTGTGTAAGCTGATCCGAAAACTCATAGATATAAAAAAAAACTGAAAACGAAAAGTAAATAATTATTACTTGATCGAATAATAAAGCTTAAAATTCAAAGCCAAGTCCATCACCAAAATGTAAAGGACTAGGCAGTGGTATGAATTAACCCAAATACTATGCACAGAAGCTTAATCTAACGTAAAAACTACTTTAATGAAAACTAAAGTCATATGATTATGAACCAGCAAATTTTCTTGAATCCCCCCAGAAGACACCAATCCATTAGTCACTGCAAGAACTATTGCTTGCACTTTCATTTCATAACAGTTTAAAAACAAAGATGAGTACAAAAATACTAATGTGTAATTTCCTAGCGATTTATATCTTGGACTGTAACCTAAAACATTCACTAGACAGTTAGTCTTATTTCGTAAAATTAGATCCTTGCCATTGATAACCTGGACAGGAACCTCCTCATAATTCAAATCTTCTTTCACTTGCAATGGTGTATGGCTTAACTTGGGAGACATTTGCAATATACTTCCGAAGTATGGAGGTACGGGAAGTATTATGGATTGAATCTAAGACAGGCAGTAAGGCTAAGCGATATGCCAGTATACCCACCTTTTCCAAATTCTCAAAAGTTCCAAAAAGTCTTAGGCTGAGCTTCCCTTTCTTCCCAAAGCTCAAGATTCCTTTCAACCACAAGACTATACCATATCTTCAACTTTTAAAATTTAGTTATTTTCTTCCGACTGCTGACTTTGAGCTATCTTCCTTTTCTACTTAACCGAGTCAAGACCTCATTAGATATTTGCACTGACTCAGATCCCAAAATCGAGCTCTCTCCCACTTCAGTCGAATTGGTTGGTGACCTACACTTATCCGTAGGGTGCAATGAAAGGGGCCATTCCGATAGTTGTTTGATAGATATTATTATAACTAAACCGTATTAGATGGAAAATGTTTCTCCCAGCTTCCCTGGAAGTTCAAAGCTTAAACTCGAAGCATATCCTACACAATTTGAACTGTCCTTTCTGACTGACCCATCTGCGGGTGGAACAAGATACTGAAATCAAGTCTTGTGTCTAGAGCCTTTTCCATACTTTTCCAAAGTTTGGAAGTGAACTTTGGAACTTGTTCTGACAGTGTAGTCTATGTCTAGCAATCTTGTTCTGACACCTTGGATCATGTTTAGACCAAGTGTCTATAAAATACAACTGAAATAGGTCCTGCACATACGTCTTCACTTGCTTGATAAACTGAGTATCAAAAACAAAACAAAAGAGAAAAACTAGCTTGATAAGTCATTGCTAATTGCCCTTAACTGCTTGTAACTTCTTTTGTGCAGACAATTTTATGCTAACTTATCTGTTTCGTATTTTTCCTTGTACAGAAGGAATCTCCTCTAGGTTTGGCCACGCAATCTGCTCATCCAGGTAATTTTTTTTTTTTTTTTTGCATTATTTGGCTAGTTGTGCCCCACTTCTAGCAATATCAATGTTCCTGTTAGGGAGAAAGACCATGTTCTAATGTCATTTTTTTCGTATAACAAGGGAATTGGTTGAACATTATACATGGTCTATTTCAGTTGTAATTTTCACCGTGGCTGAGGCTATTGTGAAGATTGGAATTATACATTCGTGAGAATGGAAATGCACTGTTGATATACAACATTTATCATTGTAGAAGAGGATAATATCATTGGTCACTTATCTCTTTAGAGATACCATCGTTTGTTCTCTATCTATATTAATTGAATTAATAAAGATATTGCCTGATAGGCTGCCTCTTCTATGTGGTCATGGTTTTAGCAGTTTTGGGGATTTCTGTTAACATGTTTTACATTTTCTGACTGCAGCTCGTTTCTCCCCTGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCAGCCACCTCCAAAGTACTGA

mRNA sequence

ATGTATCTTCAGTTTTACATAAACGACAATGGTGATAAAGTCTACACCACAAAGAAGGAATCTCCTCTAGGTTTGGCCACGCAATCTGCTCATCCAGCTCGTTTCTCCCCTGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCAGCCACCTCCAAAGTACTGA

Coding sequence (CDS)

ATGTATCTTCAGTTTTACATAAACGACAATGGTGATAAAGTCTACACCACAAAGAAGGAATCTCCTCTAGGTTTGGCCACGCAATCTGCTCATCCAGCTCGTTTCTCCCCTGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCAGCCACCTCCAAAGTACTGA

Protein sequence

MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY*

Homology

[Close]

BLAST of Chy4G078060 vs. ExPASy Swiss-Prot
Match: Q93XX8 (H/ACA ribonucleoprotein complex subunit 3-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g20490 PE=3 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 1.7e-25
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQ YIN+ G+KVYTTKKESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  
Sbjct: 1  MYLQCYINEKGEKVYTTKKESPLGLATESAHPARFSPDDKYSKQRVLLKKRFGLLPTQNA 60

Query: 61 PPKY 65
          P +Y
Sbjct: 61 PLQY 64

[Close]

BLAST of Chy4G078060 vs. ExPASy Swiss-Prot
Match: Q6DRH5 (H/ACA ribonucleoprotein complex subunit 3 OS=Danio rerio OX=7955 GN=nop10 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 6.2e-20
Identity = 44/62 (70.97%), Postives = 51/62 (82.26%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          M+LQFY+N+NG++VYT KK  P G  T SAHPARFSPDDK+SR RV +KKRFGLL TQQP
Sbjct: 1  MFLQFYLNENGERVYTLKKVDPSGQPTSSAHPARFSPDDKFSRHRVTIKKRFGLLLTQQP 60

Query: 61 PP 63
           P
Sbjct: 61 RP 62

[Close]

BLAST of Chy4G078060 vs. ExPASy Swiss-Prot
Match: Q9NPE3 (H/ACA ribonucleoprotein complex subunit 3 OS=Homo sapiens OX=9606 GN=NOP10 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.5e-18
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          M+LQ+Y+N+ GD+VYT KK  P+G  T SAHPARFSPDDKYSR R+ +KKRF +L TQQP
Sbjct: 1  MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60

Query: 61 PP 63
           P
Sbjct: 61 RP 62

[Close]

BLAST of Chy4G078060 vs. ExPASy Swiss-Prot
Match: Q9CQS2 (H/ACA ribonucleoprotein complex subunit 3 OS=Mus musculus OX=10090 GN=Nop10 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.5e-18
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          M+LQ+Y+N+ GD+VYT KK  P+G  T SAHPARFSPDDKYSR R+ +KKRF +L TQQP
Sbjct: 1  MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60

Query: 61 PP 63
           P
Sbjct: 61 RP 62

[Close]

BLAST of Chy4G078060 vs. ExPASy Swiss-Prot
Match: Q9V5P6 (H/ACA ribonucleoprotein complex subunit 3 OS=Drosophila melanogaster OX=7227 GN=CG7637 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.0e-18
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYL + IN+NGD+VYT KK +  G  T SAHPARFSP+DKYSRQR+ +KKRFGLL TQ+P
Sbjct: 1  MYLMYTINENGDRVYTLKKRTEDGRPTLSAHPARFSPEDKYSRQRLTIKKRFGLLLTQKP 60

Query: 61 PPKY 65
           P Y
Sbjct: 61 EPIY 64

[Close]

BLAST of Chy4G078060 vs. ExPASy TrEMBL
Match: A0A1S3BHD2 (Nucleolar protein 10 OS=Cucumis melo OX=3656 GN=LOC103489864 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.6e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]

BLAST of Chy4G078060 vs. ExPASy TrEMBL
Match: A0A2P2IS35 (Nucleolar protein 10 OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.6e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]

BLAST of Chy4G078060 vs. ExPASy TrEMBL
Match: A0A6P4CV10 (Nucleolar protein 10 OS=Arachis duranensis OX=130453 GN=LOC107481354 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.8e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINDNGDKVYTTKKE+PLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKETPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]

BLAST of Chy4G078060 vs. ExPASy TrEMBL
Match: A0A445DPP9 (Nucleolar protein 10 OS=Arachis hypogaea OX=3818 GN=Ahy_A03g011132 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.8e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINDNGDKVYTTKKE+PLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKETPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]

BLAST of Chy4G078060 vs. ExPASy TrEMBL
Match: A0A7J7CYK9 (Nucleolar protein 10 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW12G00152 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.5e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYIN+NGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]

BLAST of Chy4G078060 vs. NCBI nr
Match: XP_008447412.1 (PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis melo] >XP_016900440.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis melo])

HSP 1 Score: 137 bits (346), Expect = 6.05e-41
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 64
          PPKY
Sbjct: 61 PPKY 64

[Close]

BLAST of Chy4G078060 vs. NCBI nr
Match: XP_015957125.1 (H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis duranensis] >XP_015968038.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis duranensis] >XP_016190259.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis ipaensis] >XP_016207587.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis ipaensis] >XP_025603224.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis hypogaea] >XP_025638752.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis hypogaea] >XP_025663306.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis hypogaea] >XP_025690500.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis hypogaea] >XP_038888268.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Benincasa hispida] >QHO59290.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis hypogaea] >RYR65157.1 hypothetical protein Ahy_A03g011132 [Arachis hypogaea])

HSP 1 Score: 136 bits (343), Expect = 1.74e-40
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINDNGDKVYTTKKE+PLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKETPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 64
          PPKY
Sbjct: 61 PPKY 64

[Close]

BLAST of Chy4G078060 vs. NCBI nr
Match: XP_011651438.1 (H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis sativus] >XP_021665893.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Hevea brasiliensis] >XP_027352960.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Abrus precatorius] >XP_031738537.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis sativus] >XP_038718649.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Tripterygium wilfordii] >PIN05065.1 H/ACA snoRNP complex, subunit NOP10 [Handroanthus impetiginosus] >KAE8650652.1 hypothetical protein Csa_011605 [Cucumis sativus] >KAF5738956.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Tripterygium wilfordii])

HSP 1 Score: 136 bits (342), Expect = 2.47e-40
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYIN+NGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 64
          PPKY
Sbjct: 61 PPKY 64

[Close]

BLAST of Chy4G078060 vs. NCBI nr
Match: XP_027917459.1 (H/ACA ribonucleoprotein complex subunit 3-like protein [Vigna unguiculata])

HSP 1 Score: 135 bits (341), Expect = 3.51e-40
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRV LKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVTLKKRFGLLPTQQP 60

Query: 61 PPKY 64
          PPKY
Sbjct: 61 PPKY 64

[Close]

BLAST of Chy4G078060 vs. NCBI nr
Match: XP_009410656.1 (PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Musa acuminata subsp. malaccensis] >XP_009410663.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Musa acuminata subsp. malaccensis] >CAG1859462.1 unnamed protein product [Musa acuminata subsp. malaccensis])

HSP 1 Score: 135 bits (340), Expect = 4.98e-40
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYIN+NGDKVYTTKKESPLG+ATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINENGDKVYTTKKESPLGMATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 64
          PPKY
Sbjct: 61 PPKY 64

[Close]

BLAST of Chy4G078060 vs. TAIR 10
Match: AT2G20490.1 (nucleolar RNA-binding Nop10p family protein )

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-26
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQ YIN+ G+KVYTTKKESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  
Sbjct: 1  MYLQCYINEKGEKVYTTKKESPLGLATESAHPARFSPDDKYSKQRVLLKKRFGLLPTQNA 60

Query: 61 PPKY 65
          P +Y
Sbjct: 61 PLQY 64

[Close]

BLAST of Chy4G078060 vs. TAIR 10
Match: AT2G20490.2 (nucleolar RNA-binding Nop10p family protein )

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-24
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQ YIN+ G+KVYTT KESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  
Sbjct: 1  MYLQCYINEKGEKVYTT-KESPLGLATESAHPARFSPDDKYSKQRVLLKKRFGLLPTQNA 60

Query: 61 PPKY 65
          P +Y
Sbjct: 61 PLQY 63

The following BLAST results are available for this feature:

BLAST of Chy4G078060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93XX8	1.7e-25	84.38	H/ACA ribonucleoprotein complex subunit 3-like protein OS=Arabidopsis thaliana O...	[more]
Q6DRH5	6.2e-20	70.97	H/ACA ribonucleoprotein complex subunit 3 OS=Danio rerio OX=7955 GN=nop10 PE=3 S...	[more]
Q9NPE3	1.5e-18	66.13	H/ACA ribonucleoprotein complex subunit 3 OS=Homo sapiens OX=9606 GN=NOP10 PE=1 ...	[more]
Q9CQS2	1.5e-18	66.13	H/ACA ribonucleoprotein complex subunit 3 OS=Mus musculus OX=10090 GN=Nop10 PE=3...	[more]
Q9V5P6	2.0e-18	67.19	H/ACA ribonucleoprotein complex subunit 3 OS=Drosophila melanogaster OX=7227 GN=...	[more]

BLAST of Chy4G078060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHD2	2.6e-29	100.00	Nucleolar protein 10 OS=Cucumis melo OX=3656 GN=LOC103489864 PE=3 SV=1	[more]
A0A2P2IS35	2.6e-29	100.00	Nucleolar protein 10 OS=Rhizophora mucronata OX=61149 PE=3 SV=1	[more]
A0A6P4CV10	5.8e-29	98.44	Nucleolar protein 10 OS=Arachis duranensis OX=130453 GN=LOC107481354 PE=3 SV=1	[more]
A0A445DPP9	5.8e-29	98.44	Nucleolar protein 10 OS=Arachis hypogaea OX=3818 GN=Ahy_A03g011132 PE=3 SV=1	[more]
A0A7J7CYK9	7.5e-29	98.44	Nucleolar protein 10 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW12G00152 PE=...	[more]

BLAST of Chy4G078060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447412.1	6.05e-41	100.00	PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis melo]...	[more]
XP_015957125.1	1.74e-40	98.44	H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis duranensis] >XP_...	[more]
XP_011651438.1	2.47e-40	98.44	H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis sativus] >XP_021...	[more]
XP_027917459.1	3.51e-40	98.44	H/ACA ribonucleoprotein complex subunit 3-like protein [Vigna unguiculata]	[more]
XP_009410656.1	4.98e-40	96.88	PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Musa acuminat...	[more]

BLAST of Chy4G078060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20490.1	1.2e-26	84.38	nucleolar RNA-binding Nop10p family protein	[more]
AT2G20490.2	1.1e-24	82.81	nucleolar RNA-binding Nop10p family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007264	H/ACA ribonucleoprotein complex, subunit Nop10	PFAM	PF04135	Nop10p	coord: 3..52 e-value: 3.8E-19 score: 68.5
IPR007264	H/ACA ribonucleoprotein complex, subunit Nop10	PANTHER	PTHR13305	RIBOSOME BIOGENESIS PROTEIN NOP10	coord: 1..64
None	No IPR available	GENE3D	2.20.28.40	H/ACA ribonucleoprotein complex, subunit Nop10	coord: 10..54 e-value: 1.8E-14 score: 55.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..40
None	No IPR available	PANTHER	PTHR13305:SF5	NUCLEOLAR RNA-BINDING NOP10P-LIKE PROTEIN	coord: 1..64
IPR036756	H/ACA ribonucleoprotein complex, subunit Nop10 superfamily	SUPERFAMILY	144210	Nop10-like SnoRNP	coord: 3..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G078060.1	Chy4G078060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010197	polar nucleus fusion
biological_process	GO:0031118	rRNA pseudouridine synthesis
biological_process	GO:0031120	snRNA pseudouridine synthesis
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0031429	box H/ACA snoRNP complex
cellular_component	GO:0090661	box H/ACA telomerase RNP complex
cellular_component	GO:0015030	Cajal body
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0034513	box H/ACA snoRNA binding
molecular_function	GO:0070034	telomerase RNA binding
molecular_function	GO:0030515	snoRNA binding