Chy4G077680 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G077680
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	bet1-like SNARE 1-1
Location	chrH04: 15487755 .. 15489893 (-)
RNA-Seq Expression	Chy4G077680
Synteny	Chy4G077680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGCGAGAAGGTTTTATCTTGAACCTTTCAATACTCCCTTTTATGTTTCTTTCCTATTAAGCAATCCACGAGGGTCGCCGCTGTTTTTCAGAAATTCTACTGGGTTTTGTTAGTTTGTTGGAAATTTAAATTTATGATTCGTGGTCGGGTTGCATTATTATAGAGTAGTGGGATCATGATAGGACGATGACTCTATGAATTTGAGTATGTTTTTGGTAAGGGGGTTTCAATTTGCATTATTTTTATGCATTTCAAATTTTCTACATCTGAAGAGTACTTTTCTAGCTTATTTCTCTTGCACATACTTTAGCTGGTGGTTTTATAATGATCACACATTCGTAATTTTGCGCTCCGGTTCTATTTTATCTTCAAGAATTTCTTCATTCTGTTTGTGATGCTTCATTCTGATGTTATCTTGAAATTCAAGGTTTCTAATTTTACCCTTTATGCTATGTTTTGACTTTCTGTGCCTGTACTCGAATAAGTCATATTCTTAAGTGATTTAACATTAACACCTTGTAATATTTTGGATAATTAGCTATGTTGGAAATGAATTAGTATCTTGAATTATCAGGATAGATTAATTTTGATGGCATGTTTATGTTGGAAATGAACTTCATTTCCTATAACTTAATTGATCTTTGGCAGTGAGTATGGTAGGCGTATTGTCATTTACTGGTTTTCAATTCTTTAGGTCTGGTTTCATAACCATTTGATTTTTGGTTTTCAAATTTTGAAAGTTAAGCTTATAAACATGAAGACCCCTTCCATCTCTAAATTTCTTGCTTTGTTACCCTACTTCTTACCAATCTTTTAAAAAACTACGCCAAAATTTGATACTTAAAAGAAAATAGTTGTTGTATTTGAAATTTCGATAAGAATTCAACTATTGTACTTAATGACTTATGTAAACCATGTTAAGAAATGGAGAGTAAATAAGCTTAATTTTCAAAAACAAAAAAACAAAATGATTATGGGTCTTGGTCCTCAGTTTTTATGTTTTCAAGTAAATTTCAACCTTAAAGATGAATGGAAACTCTGAAAGTCCTTTTTATTTACCCATAAATGGAGGAATATGTGTTTACAGTTGCAAGTTAGACTTTTATCAAATGAATTTTAGGTTGATCTTCCTAAGTGCCGATCGTTCTTCTTGTAATATGATTTTTTGGAGTGCAGGGAACTCCGCAACAATAGAGTTGCTCTCTTTGATGGCATTGAGGAGGGTGGTGTTAGGGCCTCACCTTCCTACTCCTCCCATGAAATTGAGGAGCATGATAATGAAGCAGCATTGGAAGGCTTGCAAGACAGAGTCCTCCTGTTGAAGAGGGTATTACATTCTTATCCGGTCTCCGTCATTAATCTTAGATGTTCGTTTGTCGGAAAGAAATAGAGAAAAAGTTATGTACCTATAATATGCCACAATTATTTCGAGGACTTTTTCCACCCATAATCTGCTGCAATTTTTGTTGAGAATGGATTTTGTGCCTATAATATAAGGCAATTATTGTCAAGAATGACATCTGCACCTACGATATGCTGCAATTATTGTTGAGAACAAATTTTGTTTCTACAATATGGTGCAATTTATGACAACGTAGAAAAGACTTTCTGACATGTGTGACTATATATTGTTCAAAAAACGCATGAGAGAATTTTTAACTAAATATTTGTTATTAATGGAAAACGCATGATGGTCGGATCTTGTATGTGTGTATATATTTTCCCAAATCGAAAACGTATTGAAAGATGTTATTGTAACAGTTGACAGGTGACATAAATGAGGAGGTTGAGAGTCACAACCGCATGCTTGATAGGATGGTATGTCAGCTCCAACTATCTTACACAGTTCTTCGTGTAATTGCCAAGGCTAAATTTCTTGCACATTTTGGTTTAGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCAGGCACTATGGATCGATTCAAGACGGTATGACCATTATTTTCTCAAGAACAATTCATTCCCACACTATTTTGACATTCCTTTTCATCGTTTTCGACATTAAATATGATTTGTTTAGGTATTTGATCCGAAGTCGAGGCCGAAGATGTTCTCACTAGTCGCACTTTTCGTGACAATTTTCTTCATCGTGTACTATCTCACAAGGTAA

mRNA sequence

ATGAACGCGAGAAGGGAACTCCGCAACAATAGAGTTGCTCTCTTTGATGGCATTGAGGAGGGTGGTGTTAGGGCCTCACCTTCCTACTCCTCCCATGAAATTGAGGAGCATGATAATGAAGCAGCATTGGAAGGCTTGCAAGACAGAGTCCTCCTGTTGAAGAGGTTGACAGGTGACATAAATGAGGAGGTTGAGAGTCACAACCGCATGCTTGATAGGATGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCAGGCACTATGGATCGATTCAAGACGGTATTTGATCCGAAGTCGAGGCCGAAGATGTTCTCACTAGTCGCACTTTTCGTGACAATTTTCTTCATCGTGTACTATCTCACAAGGTAA

Coding sequence (CDS)

ATGAACGCGAGAAGGGAACTCCGCAACAATAGAGTTGCTCTCTTTGATGGCATTGAGGAGGGTGGTGTTAGGGCCTCACCTTCCTACTCCTCCCATGAAATTGAGGAGCATGATAATGAAGCAGCATTGGAAGGCTTGCAAGACAGAGTCCTCCTGTTGAAGAGGTTGACAGGTGACATAAATGAGGAGGTTGAGAGTCACAACCGCATGCTTGATAGGATGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCAGGCACTATGGATCGATTCAAGACGGTATTTGATCCGAAGTCGAGGCCGAAGATGTTCTCACTAGTCGCACTTTTCGTGACAATTTTCTTCATCGTGTACTATCTCACAAGGTAA

Protein sequence

MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYYLTR*

Homology

[Close]

BLAST of Chy4G077680 vs. ExPASy Swiss-Prot
Match: Q9M2J9 (Bet1-like SNARE 1-1 OS=Arabidopsis thaliana OX=3702 GN=BET11 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 8.1e-45
Identity = 92/123 (74.80%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 1   MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60
           MN RRE R  R +LFDGIEEGG+RA+ SY SHEI EH+NE ALEGLQDRV+LLKRL+GDI
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSY-SHEINEHENERALEGLQDRVILLKRLSGDI 60

Query: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120
           NEEV++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KS  +M +LVA FV +F ++YY
Sbjct: 61  NEEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 122

[Close]

BLAST of Chy4G077680 vs. ExPASy Swiss-Prot
Match: Q94CG2 (Bet1-like SNARE 1-2 OS=Arabidopsis thaliana OX=3702 GN=BET12 PE=2 SV=4)

HSP 1 Score: 138.7 bits (348), Expect = 4.6e-32
Identity = 74/126 (58.73%), Postives = 96/126 (76.19%), Query Frame = 0


Query: 1   MNARRELRNNRVALF---DGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLT 60
           MN RRE R +R +LF   DG+EEG +RAS SY+    +E DN+ ALE LQDRV  LKR+T
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAH---DERDNDEALENLQDRVSFLKRVT 60

Query: 61  GDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFI 120
           GDI+EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+ KS  K   L+A FV +F I
Sbjct: 61  GDIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLI 120

Query: 121 VYYLTR 124
           +YYL R
Sbjct: 121 MYYLIR 123

[Close]

BLAST of Chy4G077680 vs. ExPASy Swiss-Prot
Match: O35152 (BET1-like protein OS=Rattus norvegicus OX=10116 GN=Bet1l PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-06
Identity = 34/100 (34.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 24  RASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRG 83
           RA  S +  EI + +N+   + L  +V  LK L  DI+ + E  NR LD M +D  S  G
Sbjct: 6   RAQSSGAVEEIVDRENKRMADSLASKVTRLKSLALDIDRDTEDQNRYLDGMDSDFTSVTG 65

Query: 84  VLSGTMDRFKTV--FDPKSRPKMFSLVALFVTIFFIVYYL 122
           +L+G++ RF TV      +R  +  +  + +  FFI+ YL
Sbjct: 66  LLTGSVKRFSTVARSGRDTRKLLCGMAVVLIVAFFILSYL 105

[Close]

BLAST of Chy4G077680 vs. ExPASy Swiss-Prot
Match: O15155 (BET1 homolog OS=Homo sapiens OX=9606 GN=BET1 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.4e-06
Identity = 34/115 (29.57%), Postives = 61/115 (53.04%), Query Frame = 0


Query: 11  RVALFDGIEEGGV-RASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNR 70
           R  L +G+  G       + S +   E +NE   E L+ +V  +K L+ +I  EV++ N+
Sbjct: 3   RAGLGEGVPPGNYGNYGYANSGYSACEEENERLTESLRSKVTAIKSLSIEIGHEVKTQNK 62

Query: 71  MLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALF-VTIFFIVYYLTR 124
           +L  M +  DS+ G L  TM + K +    S+ K+   + LF + +FFI+Y++ +
Sbjct: 63  LLAEMDSQFDSTTGFLGKTMGKLK-ILSRGSQTKLLCYMMLFSLFVFFIIYWIIK 116

[Close]

BLAST of Chy4G077680 vs. ExPASy Swiss-Prot
Match: Q5RBX2 (BET1-like protein OS=Pongo abelii OX=9601 GN=BET1L PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.7e-06
Identity = 34/103 (33.01%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 24  RASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRG 83
           RA    +  EI + +N+   + L  +V  LK L  DI+++ E  NR LD M +D  S  G
Sbjct: 6   RAQSPGAVEEILDRENKRMADNLASKVTRLKSLALDIDKDAEDQNRYLDGMDSDFTSMTG 65

Query: 84  VLSGTMDRFKTVF-DPKSRPKMF--SLVALFVTIFFIVYYLTR 124
           +L+G++ RF T+    +   K+     V L V  F + Y+L+R
Sbjct: 66  LLTGSVKRFSTMARSGRDNRKLLCGMAVGLIVAFFILSYFLSR 108

[Close]

BLAST of Chy4G077680 vs. ExPASy TrEMBL
Match: A0A0A0LBA5 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398950 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 5.4e-60
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60
           MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI
Sbjct: 1   MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60

Query: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120
           NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY
Sbjct: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Chy4G077680 vs. ExPASy TrEMBL
Match: A0A5A7VLV2 (Bet1-like SNARE 1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003400 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60
           MNARRELRNNRVALFDGIEEGGVRASPSY+SHEIEEHDNEAALEGLQDRVLLLKRLTGDI
Sbjct: 1   MNARRELRNNRVALFDGIEEGGVRASPSYTSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60

Query: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120
           NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY
Sbjct: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Chy4G077680 vs. ExPASy TrEMBL
Match: A0A1S3BYS3 (bet1-like SNARE 1-1 OS=Cucumis melo OX=3656 GN=LOC103494910 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60
           MNARRELRNNRVALFDGIEEGGVRASPSY+SHEIEEHDNEAALEGLQDRVLLLKRLTGDI
Sbjct: 1   MNARRELRNNRVALFDGIEEGGVRASPSYTSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60

Query: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120
           NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY
Sbjct: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Chy4G077680 vs. ExPASy TrEMBL
Match: A0A6J1HRZ5 (bet1-like SNARE 1-1 OS=Cucurbita maxima OX=3661 GN=LOC111466952 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 120/123 (97.56%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60
           MNARRELRNNRVALFDGIEEGGVRAS SYSSHEIEEHDNEAAL GLQDRVLLLKRLTGDI
Sbjct: 1   MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDI 60

Query: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120
           NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFV IFFIVYY
Sbjct: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVAIFFIVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Chy4G077680 vs. ExPASy TrEMBL
Match: A0A6J1HIJ8 (bet1-like SNARE 1-1 OS=Cucurbita moschata OX=3662 GN=LOC111463905 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 120/123 (97.56%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60
           MNARRELRNNRVALFDGIEEGGVRAS SYSSHEIEEHDNEAAL GLQDRVLLLKRLTGDI
Sbjct: 1   MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDI 60

Query: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120
           NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFV IFFIVYY
Sbjct: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVAIFFIVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Chy4G077680 vs. NCBI nr
Match: XP_004151976.1 (bet1-like SNARE 1-1 [Cucumis sativus] >XP_031737674.1 bet1-like SNARE 1-1 [Cucumis sativus] >KGN57937.1 hypothetical protein Csa_009991 [Cucumis sativus])

HSP 1 Score: 240 bits (613), Expect = 7.82e-80
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60
           MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI
Sbjct: 1   MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60

Query: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120
           NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY
Sbjct: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120

Query: 121 LTR 123
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Chy4G077680 vs. NCBI nr
Match: XP_008454511.1 (PREDICTED: bet1-like SNARE 1-1 [Cucumis melo] >KAA0066289.1 bet1-like SNARE 1-1 [Cucumis melo var. makuwa])

HSP 1 Score: 239 bits (610), Expect = 2.24e-79
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60
           MNARRELRNNRVALFDGIEEGGVRASPSY+SHEIEEHDNEAALEGLQDRVLLLKRLTGDI
Sbjct: 1   MNARRELRNNRVALFDGIEEGGVRASPSYTSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60

Query: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120
           NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY
Sbjct: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120

Query: 121 LTR 123
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Chy4G077680 vs. NCBI nr
Match: XP_022963635.1 (bet1-like SNARE 1-1 [Cucurbita moschata] >XP_022967416.1 bet1-like SNARE 1-1 [Cucurbita maxima] >XP_023553595.1 bet1-like SNARE 1-1 [Cucurbita pepo subsp. pepo] >KAG6571509.1 Bet1-like SNARE 1-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011257.1 Bet1-like SNARE 1-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 233 bits (593), Expect = 8.79e-77
Identity = 120/123 (97.56%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60
           MNARRELRNNRVALFDGIEEGGVRAS SYSSHEIEEHDNEAAL GLQDRVLLLKRLTGDI
Sbjct: 1   MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDI 60

Query: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120
           NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFV IFFIVYY
Sbjct: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVAIFFIVYY 120

Query: 121 LTR 123
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Chy4G077680 vs. NCBI nr
Match: XP_038887294.1 (bet1-like SNARE 1-1 [Benincasa hispida] >XP_038887295.1 bet1-like SNARE 1-1 [Benincasa hispida])

HSP 1 Score: 232 bits (591), Expect = 1.77e-76
Identity = 119/123 (96.75%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60
           MNARRELRNNRVALFDGIEEGGVRAS SYSSHEIEEHDNEAAL+GLQDRVLLLKRLTGDI
Sbjct: 1   MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALDGLQDRVLLLKRLTGDI 60

Query: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120
           NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKMFSLVALFV IFFIVYY
Sbjct: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVAIFFIVYY 120

Query: 121 LTR 123
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Chy4G077680 vs. NCBI nr
Match: XP_022146012.1 (bet1-like SNARE 1-1 [Momordica charantia] >XP_022146013.1 bet1-like SNARE 1-1 [Momordica charantia])

HSP 1 Score: 231 bits (588), Expect = 5.09e-76
Identity = 118/123 (95.93%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60
           MNARRE+RNNRVALFDGIEEGGVRAS S+SSHEIEEHDNEAALEGLQDRVLLLKRLTGDI
Sbjct: 1   MNARREMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60

Query: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120
           NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKMFSLVALFV IFFIVYY
Sbjct: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVAIFFIVYY 120

Query: 121 LTR 123
           LTR
Sbjct: 121 LTR 123

[Close]

BLAST of Chy4G077680 vs. TAIR 10
Match: AT3G58170.1 (BET1P/SFT1P-like protein 14A )

HSP 1 Score: 181.0 bits (458), Expect = 5.7e-46
Identity = 92/123 (74.80%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 1   MNARRELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDI 60
           MN RRE R  R +LFDGIEEGG+RA+ SY SHEI EH+NE ALEGLQDRV+LLKRL+GDI
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSY-SHEINEHENERALEGLQDRVILLKRLSGDI 60

Query: 61  NEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYY 120
           NEEV++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KS  +M +LVA FV +F ++YY
Sbjct: 61  NEEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 122

[Close]

BLAST of Chy4G077680 vs. TAIR 10
Match: AT4G14455.1 (Target SNARE coiled-coil domain protein )

HSP 1 Score: 138.7 bits (348), Expect = 3.3e-33
Identity = 74/126 (58.73%), Postives = 96/126 (76.19%), Query Frame = 0


Query: 1   MNARRELRNNRVALF---DGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLT 60
           MN RRE R +R +LF   DG+EEG +RAS SY+    +E DN+ ALE LQDRV  LKR+T
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAH---DERDNDEALENLQDRVSFLKRVT 60

Query: 61  GDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFI 120
           GDI+EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+ KS  K   L+A FV +F I
Sbjct: 61  GDIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLI 120

Query: 121 VYYLTR 124
           +YYL R
Sbjct: 121 MYYLIR 123

The following BLAST results are available for this feature:

BLAST of Chy4G077680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2J9	8.1e-45	74.80	Bet1-like SNARE 1-1 OS=Arabidopsis thaliana OX=3702 GN=BET11 PE=1 SV=1	[more]
Q94CG2	4.6e-32	58.73	Bet1-like SNARE 1-2 OS=Arabidopsis thaliana OX=3702 GN=BET12 PE=2 SV=4	[more]
O35152	1.9e-06	34.00	BET1-like protein OS=Rattus norvegicus OX=10116 GN=Bet1l PE=1 SV=1	[more]
O15155	7.4e-06	29.57	BET1 homolog OS=Homo sapiens OX=9606 GN=BET1 PE=1 SV=1	[more]
Q5RBX2	9.7e-06	33.01	BET1-like protein OS=Pongo abelii OX=9601 GN=BET1L PE=3 SV=1	[more]

BLAST of Chy4G077680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBA5	5.4e-60	100.00	t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=365...	[more]
A0A5A7VLV2	1.2e-59	99.19	Bet1-like SNARE 1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G0...	[more]
A0A1S3BYS3	1.2e-59	99.19	bet1-like SNARE 1-1 OS=Cucumis melo OX=3656 GN=LOC103494910 PE=4 SV=1	[more]
A0A6J1HRZ5	1.1e-57	97.56	bet1-like SNARE 1-1 OS=Cucurbita maxima OX=3661 GN=LOC111466952 PE=4 SV=1	[more]
A0A6J1HIJ8	1.1e-57	97.56	bet1-like SNARE 1-1 OS=Cucurbita moschata OX=3662 GN=LOC111463905 PE=4 SV=1	[more]

BLAST of Chy4G077680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151976.1	7.82e-80	100.00	bet1-like SNARE 1-1 [Cucumis sativus] >XP_031737674.1 bet1-like SNARE 1-1 [Cucum...	[more]
XP_008454511.1	2.24e-79	99.19	PREDICTED: bet1-like SNARE 1-1 [Cucumis melo] >KAA0066289.1 bet1-like SNARE 1-1 ...	[more]
XP_022963635.1	8.79e-77	97.56	bet1-like SNARE 1-1 [Cucurbita moschata] >XP_022967416.1 bet1-like SNARE 1-1 [Cu...	[more]
XP_038887294.1	1.77e-76	96.75	bet1-like SNARE 1-1 [Benincasa hispida] >XP_038887295.1 bet1-like SNARE 1-1 [Ben...	[more]
XP_022146012.1	5.09e-76	95.93	bet1-like SNARE 1-1 [Momordica charantia] >XP_022146013.1 bet1-like SNARE 1-1 [M...	[more]

BLAST of Chy4G077680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58170.1	5.7e-46	74.80	BET1P/SFT1P-like protein 14A	[more]
AT4G14455.1	3.3e-33	58.73	Target SNARE coiled-coil domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 28..95 e-value: 6.9E-4 score: 28.9
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 33..95 score: 11.846307
None	No IPR available	GENE3D	1.20.5.110		coord: 41..102 e-value: 2.3E-14 score: 55.1
None	No IPR available	PANTHER	PTHR12791:SF46	BET1-LIKE SNARE 1-1	coord: 1..123
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 29..95
IPR039897	BET1-like protein	PANTHER	PTHR12791	GOLGI SNARE BET1-RELATED	coord: 1..123
IPR039899	BET1, SNARE domain	CDD	cd15853	SNARE_Bet1	coord: 36..94 e-value: 4.04788E-20 score: 75.2318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G077680.1	Chy4G077680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0030173	integral component of Golgi membrane