Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTCGAAGAAAAGTCTAGCAAGCAATCTAATAATCAAGAGGTCAGAAACACGGGAAGTTCATCTGAAAGAGATACACAAGTGGTCCGCTCCGATGGTCATGTGTCGGAGCAAGCCCAGGTCAACCCTTTATCCTACAATGAGGGTGAACCTTGCTCTGTTCGAGTGACATCTTTGGAATAGAGGACTTTAATTACTTCTTCAATGGAAAGGAAATACCCATGACCACCAAAAATATTGAGATTATGCTCGGTATATTACTTGAAGAAAACCAGAGAAGAGAAAGGTTAATGGAAGAAGCTGAAAAGAGACAAAAGGAAGATGATGAAAAAGCGAGGAAAGAGCAGCCAGATAAGGAGAGAGAAAAGAAAGAGCAATTAGAAAAAAATGAAGAAGTGAAAAATGAAAAAGAA mRNA sequence ATGGTCGAAGAAAAGTCTAGCAAGCAATCTAATAATCAAGAGGTCAGAAACACGGGAAGTTCATCTGAAAGAGATACACAAGTGGTCCGCTCCGATGGTCATGTGTCGGAGCAAGCCCAGGTCAACCCTTTATCCTACAATGAGGGTGAACCTTGCTCTGTTCGAGTGACATCTTTGGAATAGAGGACTTTAATTACTTCTTCAATGGAAAGGAAATACCCATGACCACCAAAAATATTGAGATTATGCTCGGTATATTACTTGAAGAAAACCAGAGAAGAGAAAGGTTAATGGAAGAAGCTGAAAAGAGACAAAAGGAAGATGATGAAAAAGCGAGGAAAGAGCAGCCAGATAAGGAGAGAGAAAAGAAAGAGCAATTAGAAAAAAATGAAGAAGTGAAAAATGAAAAAGAA Coding sequence (CDS) ATGGTCGAAGAAAAGTCTAGCAAGCAATCTAATAATCAAGAGGTCAGAAACACGGGAAGTTCATCTGAAAGAGATACACAAGTGGTCCGCTCCGATGGTCATGTGTCGGAGCAAGCCCAGGTCAACCCTTTATCCTACAATGAGGGTGAACCTTGCTCTGTTCGAGTGACATCTTTGGAATAGAGGACTTTAATTACTTCTTCAATGGAAAGGAAATACCCATGACCACCAAAAATATTGAGATTATGCTCGGTATATTACTTGAAGAAAACCAGAGAAGAGAAAGGTTAATGGAAGAAGCTGAAAAGAGACAAAAGGAAGATGATGAAAAAGCGAGGAAAGAGCAGCCAGATAAGGAGAGAGAAAAGAAAGAGCAATTAGAAAAAAATGAAGAAGTGAAAAATGAAAAAGAA Protein sequence MVEEKSSKQSNNQEVRNTGSSSERDTQVVRSDGHVSEQAQVNPLSYNEGEPCSVRVTSLE*RTLITSSMERKYP*PPKILRLCSVYYLKKTREEKG*WKKLKRDKRKMMKKRGKSSQIRREKRKSN*KKMKK*KMKKX
Homology
BLAST of Chy4G076840 vs. NCBI nr
Match: KGN58057.2 (hypothetical protein Csa_011332 [Cucumis sativus]) HSP 1 Score: 68.2 bits (165), Expect = 1.70e-11 Identity = 42/62 (67.74%), Postives = 44/62 (70.97%), Query Frame = 0
Query: 1 MVEEKSSKQSNNQEVRNTGSSSERDTQVVRSDGHVSEQAQVNPLSYNEGEP--CSVRVTS 60
MVEEKSSKQSN QEVRN GSSSERD GHVSEQAQVNPL YNEG CS +
Sbjct: 1 MVEEKSSKQSNKQEVRNMGSSSERD-------GHVSEQAQVNPLPYNEGATLSCSSEIFG 55
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KGN58057.2 | 1.70e-11 | 67.74 | hypothetical protein Csa_011332 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 116..132 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..51 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 99..132 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 98..132 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..47 |
Relationships
The following mRNA feature(s) are a part of this gene:
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