Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGATCAGTAAGGTTCTCGTTGCAATCCTCATGGTCTCTGCAATGGCAATGGCATTTCTGGAAAATGTTGAAGGAGGAAGAGAGATGGCTCTGAAGAAACCAACTGCAAAAACTTATTCCCAAGAATTAGATGAAAATTATGAAGGATACAAACCCAAGGAGGATTACGAGGGATACAAACCCAAGGAGGATTATGAGGGATACAAACCCAAGGAGGATTACGAATGTGATGGATACAAATACAACGACAAAGATTGCTATGAATATGGCAACTGTGACAAATCTCCCTACAACGAGGACATCGACCATCAATACAACTGGGGTCCGTATAAGAAACCGATAGCAAAGCCGAAGGAGATGGCCAAAAAGTATGGAGTTCACCAGAGCTACCCCTGA
mRNA sequence
ATGACGATCAGTAAGGTTCTCGTTGCAATCCTCATGGTCTCTGCAATGGCAATGGCATTTCTGGAAAATGTTGAAGGAGGAAGAGAGATGGCTCTGAAGAAACCAACTGCAAAAACTTATTCCCAAGAATTAGATGAAAATTATGAAGGATACAAACCCAAGGAGGATTACGAGGGATACAAACCCAAGGAGGATTATGAGGGATACAAACCCAAGGAGGATTACGAATGTGATGGATACAAATACAACGACAAAGATTGCTATGAATATGGCAACTGTGACAAATCTCCCTACAACGAGGACATCGACCATCAATACAACTGGGGTCCGTATAAGAAACCGATAGCAAAGCCGAAGGAGATGGCCAAAAAGTATGGAGTTCACCAGAGCTACCCCTGA
Coding sequence (CDS)
ATGACGATCAGTAAGGTTCTCGTTGCAATCCTCATGGTCTCTGCAATGGCAATGGCATTTCTGGAAAATGTTGAAGGAGGAAGAGAGATGGCTCTGAAGAAACCAACTGCAAAAACTTATTCCCAAGAATTAGATGAAAATTATGAAGGATACAAACCCAAGGAGGATTACGAGGGATACAAACCCAAGGAGGATTATGAGGGATACAAACCCAAGGAGGATTACGAATGTGATGGATACAAATACAACGACAAAGATTGCTATGAATATGGCAACTGTGACAAATCTCCCTACAACGAGGACATCGACCATCAATACAACTGGGGTCCGTATAAGAAACCGATAGCAAAGCCGAAGGAGATGGCCAAAAAGTATGGAGTTCACCAGAGCTACCCCTGA
Protein sequence
MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGYKPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDIDHQYNWGPYKKPIAKPKEMAKKYGVHQSYP*
Homology
BLAST of Chy4G075480 vs. ExPASy TrEMBL
Match:
A0A0A0L8T2 (Seed nucellus-specific protein OS=Cucumis sativus OX=3659 GN=Csa_3G630260 PE=4 SV=1)
HSP 1 Score: 263.1 bits (671), Expect = 6.4e-67
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0
Query: 1 MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY
Sbjct: 1 MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
Query: 61 KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDIDHQYNWGPYKKPIAKPKE 120
KPKEDYEGYKPKEDYECDGYKY+DKDCYEYGNCDKSPYNEDIDHQYNWGP KKPIAKPKE
Sbjct: 61 KPKEDYEGYKPKEDYECDGYKYSDKDCYEYGNCDKSPYNEDIDHQYNWGPNKKPIAKPKE 120
Query: 121 MAKKYGVHQSYP 133
MAKKYG HQSYP
Sbjct: 121 MAKKYGAHQSYP 132
BLAST of Chy4G075480 vs. ExPASy TrEMBL
Match:
A0A5A7VLH5 (Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00080 PE=4 SV=1)
HSP 1 Score: 223.8 bits (569), Expect = 4.3e-55
Identity = 110/132 (83.33%), Postives = 116/132 (87.88%), Query Frame = 0
Query: 1 MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
MTISKVL+AIL+VSA+AM LENVEGGREMA KKPTAKTY QELD+N YEGY
Sbjct: 1 MTISKVLIAILVVSAVAMTLLENVEGGREMAPKKPTAKTYPQELDDN---------YEGY 60
Query: 61 KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDIDHQYNWGPYKKPIAKPKE 120
KPKEDYEGYKPKEDYECDGYKY DKDCYEYGNCDKSPYNED+DHQYNWGPYKKPI KPKE
Sbjct: 61 KPKEDYEGYKPKEDYECDGYKYKDKDCYEYGNCDKSPYNEDVDHQYNWGPYKKPITKPKE 120
Query: 121 MAKKYGVHQSYP 133
M +KYGVHQSYP
Sbjct: 121 MGEKYGVHQSYP 123
BLAST of Chy4G075480 vs. ExPASy TrEMBL
Match:
O22351 (Seed nucellus-specific protein OS=Citrullus lanatus OX=3654 GN=WM403 PE=4 SV=1)
HSP 1 Score: 158.7 bits (400), Expect = 1.7e-35
Identity = 83/131 (63.36%), Postives = 95/131 (72.52%), Query Frame = 0
Query: 3 ISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGYKP 62
+ KVLVA+L++SA+AMA LENVEGGREM LK+ TA Y L+E
Sbjct: 4 VGKVLVAMLVISAIAMALLENVEGGREMGLKEATANAYPHVLNEK--------------- 63
Query: 63 KEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYN-EDIDHQYNWGPYKKPIAKPKEM 122
YEGYKPKEDYECDGYKY DK+CYEYGNCDKSPYN E+ D QYN PYKKPI KPKEM
Sbjct: 64 ---YEGYKPKEDYECDGYKYKDKNCYEYGNCDKSPYNEEEDDRQYNGSPYKKPIPKPKEM 116
Query: 123 AKKYGVHQSYP 133
A+KYGVH ++P
Sbjct: 124 ARKYGVHHNFP 116
BLAST of Chy4G075480 vs. ExPASy TrEMBL
Match:
A0A0A0KAR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109680 PE=4 SV=1)
HSP 1 Score: 122.1 bits (305), Expect = 1.8e-24
Identity = 68/134 (50.75%), Postives = 85/134 (63.43%), Query Frame = 0
Query: 1 MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
MT K LVA+L S +AM F+ENVEG R+M LK+ T Q L+E E Y
Sbjct: 2 MTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKME----------Y 61
Query: 61 KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPY--NEDIDHQYNWGPYKKPIAKP 120
P ED +Y+CDGYKY DKDCY+YGNCDKSPY ++D D QYNW YK P+ KP
Sbjct: 62 NPNED--------EYDCDGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKP 117
Query: 121 KEMAKKYGVHQSYP 133
KE+ +KY VH+++P
Sbjct: 122 KEVDEKYKVHKNFP 117
BLAST of Chy4G075480 vs. ExPASy TrEMBL
Match:
A0A5D3CS37 (Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00050 PE=4 SV=1)
HSP 1 Score: 112.1 bits (279), Expect = 1.8e-21
Identity = 64/125 (51.20%), Postives = 78/125 (62.40%), Query Frame = 0
Query: 1 MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
M I K LVA+L +S + M F+ENVEGGREM LK+ T + Y G+
Sbjct: 2 MMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEAT------------------KAYNGH 61
Query: 61 KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDIDHQYNWGPYKKPIAKPKE 120
E+ + YKPKE+ CDGYKY DKDCYEYGNC KSPY + D QYNW + KP+ KPKE
Sbjct: 62 VSNENVD-YKPKEEDGCDGYKYKDKDCYEYGNCGKSPYPDYDDGQYNWNSHMKPVPKPKE 107
Query: 121 MAKKY 126
M +KY
Sbjct: 122 MDEKY 107
BLAST of Chy4G075480 vs. NCBI nr
Match:
KAE8650853.1 (hypothetical protein Csa_001704, partial [Cucumis sativus])
HSP 1 Score: 242 bits (618), Expect = 1.95e-80
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0
Query: 1 MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY
Sbjct: 1 MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
Query: 61 KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDIDHQYNWGPYKKPIAKPKE 120
KPKEDYEGYKPKEDYECDGYKY+DKDCYEYGNCDKSPYNEDIDHQYNWGP KKPIAKPKE
Sbjct: 61 KPKEDYEGYKPKEDYECDGYKYSDKDCYEYGNCDKSPYNEDIDHQYNWGPNKKPIAKPKE 120
Query: 121 MAK 123
MAK
Sbjct: 121 MAK 123
BLAST of Chy4G075480 vs. NCBI nr
Match:
KAA0068070.1 (Seed nucellus-specific protein [Cucumis melo var. makuwa] >TYK26054.1 Seed nucellus-specific protein [Cucumis melo var. makuwa])
HSP 1 Score: 222 bits (566), Expect = 1.66e-72
Identity = 110/132 (83.33%), Postives = 116/132 (87.88%), Query Frame = 0
Query: 1 MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
MTISKVL+AIL+VSA+AM LENVEGGREMA KKPTAKTY QELD+NYEGYK
Sbjct: 1 MTISKVLIAILVVSAVAMTLLENVEGGREMAPKKPTAKTYPQELDDNYEGYK-------- 60
Query: 61 KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDIDHQYNWGPYKKPIAKPKE 120
PKEDYEGYKPKEDYECDGYKY DKDCYEYGNCDKSPYNED+DHQYNWGPYKKPI KPKE
Sbjct: 61 -PKEDYEGYKPKEDYECDGYKYKDKDCYEYGNCDKSPYNEDVDHQYNWGPYKKPITKPKE 120
Query: 121 MAKKYGVHQSYP 132
M +KYGVHQSYP
Sbjct: 121 MGEKYGVHQSYP 123
BLAST of Chy4G075480 vs. NCBI nr
Match:
AAB82329.1 (seed nucellus-specific protein [Citrullus lanatus])
HSP 1 Score: 157 bits (398), Expect = 5.27e-47
Identity = 83/131 (63.36%), Postives = 95/131 (72.52%), Query Frame = 0
Query: 3 ISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGYKP 62
+ KVLVA+L++SA+AMA LENVEGGREM LK+ TA Y L+E YEGYK
Sbjct: 4 VGKVLVAMLVISAIAMALLENVEGGREMGLKEATANAYPHVLNEKYEGYK---------- 63
Query: 63 KEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDID-HQYNWGPYKKPIAKPKEM 122
PKEDYECDGYKY DK+CYEYGNCDKSPYNE+ D QYN PYKKPI KPKEM
Sbjct: 64 --------PKEDYECDGYKYKDKNCYEYGNCDKSPYNEEEDDRQYNGSPYKKPIPKPKEM 116
Query: 123 AKKYGVHQSYP 132
A+KYGVH ++P
Sbjct: 124 ARKYGVHHNFP 116
BLAST of Chy4G075480 vs. NCBI nr
Match:
KGN46573.1 (hypothetical protein Csa_005092 [Cucumis sativus])
HSP 1 Score: 120 bits (302), Expect = 2.15e-32
Identity = 68/134 (50.75%), Postives = 85/134 (63.43%), Query Frame = 0
Query: 1 MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
MT K LVA+L S +AM F+ENVEG R+M LK+ T Q L+E E Y
Sbjct: 2 MTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKME----------Y 61
Query: 61 KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYN--EDIDHQYNWGPYKKPIAKP 120
P ED +Y+CDGYKY DKDCY+YGNCDKSPY+ +D D QYNW YK P+ KP
Sbjct: 62 NPNED--------EYDCDGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKP 117
Query: 121 KEMAKKYGVHQSYP 132
KE+ +KY VH+++P
Sbjct: 122 KEVDEKYKVHKNFP 117
BLAST of Chy4G075480 vs. NCBI nr
Match:
TYK14008.1 (Seed nucellus-specific protein [Cucumis melo var. makuwa])
HSP 1 Score: 112 bits (279), Expect = 5.91e-29
Identity = 64/125 (51.20%), Postives = 78/125 (62.40%), Query Frame = 0
Query: 1 MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
M I K LVA+L +S + M F+ENVEGGREM LK+ T + Y G+ E+ +
Sbjct: 2 MMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEAT---------KAYNGHVSNENVD-- 61
Query: 61 KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDIDHQYNWGPYKKPIAKPKE 120
YKPKE+ CDGYKY DKDCYEYGNC KSPY + D QYNW + KP+ KPKE
Sbjct: 62 --------YKPKEEDGCDGYKYKDKDCYEYGNCGKSPYPDYDDGQYNWNSHMKPVPKPKE 107
Query: 121 MAKKY 125
M +KY
Sbjct: 122 MDEKY 107
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L8T2 | 6.4e-67 | 97.73 | Seed nucellus-specific protein OS=Cucumis sativus OX=3659 GN=Csa_3G630260 PE=4 S... | [more] |
A0A5A7VLH5 | 4.3e-55 | 83.33 | Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
O22351 | 1.7e-35 | 63.36 | Seed nucellus-specific protein OS=Citrullus lanatus OX=3654 GN=WM403 PE=4 SV=1 | [more] |
A0A0A0KAR7 | 1.8e-24 | 50.75 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109680 PE=4 SV=1 | [more] |
A0A5D3CS37 | 1.8e-21 | 51.20 | Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
Match Name | E-value | Identity | Description | |
KAE8650853.1 | 1.95e-80 | 98.37 | hypothetical protein Csa_001704, partial [Cucumis sativus] | [more] |
KAA0068070.1 | 1.66e-72 | 83.33 | Seed nucellus-specific protein [Cucumis melo var. makuwa] >TYK26054.1 Seed nucel... | [more] |
AAB82329.1 | 5.27e-47 | 63.36 | seed nucellus-specific protein [Citrullus lanatus] | [more] |
KGN46573.1 | 2.15e-32 | 50.75 | hypothetical protein Csa_005092 [Cucumis sativus] | [more] |
TYK14008.1 | 5.91e-29 | 51.20 | Seed nucellus-specific protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |