Chy4G075480 (gene) Cucumber (hystrix) v1

Overview
NameChy4G075480
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSeed nucellus-specific protein
LocationchrH04: 10817092 .. 10817490 (+)
RNA-Seq ExpressionChy4G075480
SyntenyChy4G075480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGATCAGTAAGGTTCTCGTTGCAATCCTCATGGTCTCTGCAATGGCAATGGCATTTCTGGAAAATGTTGAAGGAGGAAGAGAGATGGCTCTGAAGAAACCAACTGCAAAAACTTATTCCCAAGAATTAGATGAAAATTATGAAGGATACAAACCCAAGGAGGATTACGAGGGATACAAACCCAAGGAGGATTATGAGGGATACAAACCCAAGGAGGATTACGAATGTGATGGATACAAATACAACGACAAAGATTGCTATGAATATGGCAACTGTGACAAATCTCCCTACAACGAGGACATCGACCATCAATACAACTGGGGTCCGTATAAGAAACCGATAGCAAAGCCGAAGGAGATGGCCAAAAAGTATGGAGTTCACCAGAGCTACCCCTGA

mRNA sequence

ATGACGATCAGTAAGGTTCTCGTTGCAATCCTCATGGTCTCTGCAATGGCAATGGCATTTCTGGAAAATGTTGAAGGAGGAAGAGAGATGGCTCTGAAGAAACCAACTGCAAAAACTTATTCCCAAGAATTAGATGAAAATTATGAAGGATACAAACCCAAGGAGGATTACGAGGGATACAAACCCAAGGAGGATTATGAGGGATACAAACCCAAGGAGGATTACGAATGTGATGGATACAAATACAACGACAAAGATTGCTATGAATATGGCAACTGTGACAAATCTCCCTACAACGAGGACATCGACCATCAATACAACTGGGGTCCGTATAAGAAACCGATAGCAAAGCCGAAGGAGATGGCCAAAAAGTATGGAGTTCACCAGAGCTACCCCTGA

Coding sequence (CDS)

ATGACGATCAGTAAGGTTCTCGTTGCAATCCTCATGGTCTCTGCAATGGCAATGGCATTTCTGGAAAATGTTGAAGGAGGAAGAGAGATGGCTCTGAAGAAACCAACTGCAAAAACTTATTCCCAAGAATTAGATGAAAATTATGAAGGATACAAACCCAAGGAGGATTACGAGGGATACAAACCCAAGGAGGATTATGAGGGATACAAACCCAAGGAGGATTACGAATGTGATGGATACAAATACAACGACAAAGATTGCTATGAATATGGCAACTGTGACAAATCTCCCTACAACGAGGACATCGACCATCAATACAACTGGGGTCCGTATAAGAAACCGATAGCAAAGCCGAAGGAGATGGCCAAAAAGTATGGAGTTCACCAGAGCTACCCCTGA

Protein sequence

MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGYKPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDIDHQYNWGPYKKPIAKPKEMAKKYGVHQSYP*
Homology
BLAST of Chy4G075480 vs. ExPASy TrEMBL
Match: A0A0A0L8T2 (Seed nucellus-specific protein OS=Cucumis sativus OX=3659 GN=Csa_3G630260 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.4e-67
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0

Query: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
           MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY
Sbjct: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60

Query: 61  KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDIDHQYNWGPYKKPIAKPKE 120
           KPKEDYEGYKPKEDYECDGYKY+DKDCYEYGNCDKSPYNEDIDHQYNWGP KKPIAKPKE
Sbjct: 61  KPKEDYEGYKPKEDYECDGYKYSDKDCYEYGNCDKSPYNEDIDHQYNWGPNKKPIAKPKE 120

Query: 121 MAKKYGVHQSYP 133
           MAKKYG HQSYP
Sbjct: 121 MAKKYGAHQSYP 132

BLAST of Chy4G075480 vs. ExPASy TrEMBL
Match: A0A5A7VLH5 (Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00080 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.3e-55
Identity = 110/132 (83.33%), Postives = 116/132 (87.88%), Query Frame = 0

Query: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
           MTISKVL+AIL+VSA+AM  LENVEGGREMA KKPTAKTY QELD+N         YEGY
Sbjct: 1   MTISKVLIAILVVSAVAMTLLENVEGGREMAPKKPTAKTYPQELDDN---------YEGY 60

Query: 61  KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDIDHQYNWGPYKKPIAKPKE 120
           KPKEDYEGYKPKEDYECDGYKY DKDCYEYGNCDKSPYNED+DHQYNWGPYKKPI KPKE
Sbjct: 61  KPKEDYEGYKPKEDYECDGYKYKDKDCYEYGNCDKSPYNEDVDHQYNWGPYKKPITKPKE 120

Query: 121 MAKKYGVHQSYP 133
           M +KYGVHQSYP
Sbjct: 121 MGEKYGVHQSYP 123

BLAST of Chy4G075480 vs. ExPASy TrEMBL
Match: O22351 (Seed nucellus-specific protein OS=Citrullus lanatus OX=3654 GN=WM403 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.7e-35
Identity = 83/131 (63.36%), Postives = 95/131 (72.52%), Query Frame = 0

Query: 3   ISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGYKP 62
           + KVLVA+L++SA+AMA LENVEGGREM LK+ TA  Y   L+E                
Sbjct: 4   VGKVLVAMLVISAIAMALLENVEGGREMGLKEATANAYPHVLNEK--------------- 63

Query: 63  KEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYN-EDIDHQYNWGPYKKPIAKPKEM 122
              YEGYKPKEDYECDGYKY DK+CYEYGNCDKSPYN E+ D QYN  PYKKPI KPKEM
Sbjct: 64  ---YEGYKPKEDYECDGYKYKDKNCYEYGNCDKSPYNEEEDDRQYNGSPYKKPIPKPKEM 116

Query: 123 AKKYGVHQSYP 133
           A+KYGVH ++P
Sbjct: 124 ARKYGVHHNFP 116

BLAST of Chy4G075480 vs. ExPASy TrEMBL
Match: A0A0A0KAR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109680 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.8e-24
Identity = 68/134 (50.75%), Postives = 85/134 (63.43%), Query Frame = 0

Query: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
           MT  K LVA+L  S +AM F+ENVEG R+M LK+ T     Q L+E  E          Y
Sbjct: 2   MTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKME----------Y 61

Query: 61  KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPY--NEDIDHQYNWGPYKKPIAKP 120
            P ED        +Y+CDGYKY DKDCY+YGNCDKSPY  ++D D QYNW  YK P+ KP
Sbjct: 62  NPNED--------EYDCDGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKP 117

Query: 121 KEMAKKYGVHQSYP 133
           KE+ +KY VH+++P
Sbjct: 122 KEVDEKYKVHKNFP 117

BLAST of Chy4G075480 vs. ExPASy TrEMBL
Match: A0A5D3CS37 (Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00050 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.8e-21
Identity = 64/125 (51.20%), Postives = 78/125 (62.40%), Query Frame = 0

Query: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
           M I K LVA+L +S + M F+ENVEGGREM LK+ T                  + Y G+
Sbjct: 2   MMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEAT------------------KAYNGH 61

Query: 61  KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDIDHQYNWGPYKKPIAKPKE 120
              E+ + YKPKE+  CDGYKY DKDCYEYGNC KSPY +  D QYNW  + KP+ KPKE
Sbjct: 62  VSNENVD-YKPKEEDGCDGYKYKDKDCYEYGNCGKSPYPDYDDGQYNWNSHMKPVPKPKE 107

Query: 121 MAKKY 126
           M +KY
Sbjct: 122 MDEKY 107

BLAST of Chy4G075480 vs. NCBI nr
Match: KAE8650853.1 (hypothetical protein Csa_001704, partial [Cucumis sativus])

HSP 1 Score: 242 bits (618), Expect = 1.95e-80
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0

Query: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
           MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY
Sbjct: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60

Query: 61  KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDIDHQYNWGPYKKPIAKPKE 120
           KPKEDYEGYKPKEDYECDGYKY+DKDCYEYGNCDKSPYNEDIDHQYNWGP KKPIAKPKE
Sbjct: 61  KPKEDYEGYKPKEDYECDGYKYSDKDCYEYGNCDKSPYNEDIDHQYNWGPNKKPIAKPKE 120

Query: 121 MAK 123
           MAK
Sbjct: 121 MAK 123

BLAST of Chy4G075480 vs. NCBI nr
Match: KAA0068070.1 (Seed nucellus-specific protein [Cucumis melo var. makuwa] >TYK26054.1 Seed nucellus-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 222 bits (566), Expect = 1.66e-72
Identity = 110/132 (83.33%), Postives = 116/132 (87.88%), Query Frame = 0

Query: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
           MTISKVL+AIL+VSA+AM  LENVEGGREMA KKPTAKTY QELD+NYEGYK        
Sbjct: 1   MTISKVLIAILVVSAVAMTLLENVEGGREMAPKKPTAKTYPQELDDNYEGYK-------- 60

Query: 61  KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDIDHQYNWGPYKKPIAKPKE 120
            PKEDYEGYKPKEDYECDGYKY DKDCYEYGNCDKSPYNED+DHQYNWGPYKKPI KPKE
Sbjct: 61  -PKEDYEGYKPKEDYECDGYKYKDKDCYEYGNCDKSPYNEDVDHQYNWGPYKKPITKPKE 120

Query: 121 MAKKYGVHQSYP 132
           M +KYGVHQSYP
Sbjct: 121 MGEKYGVHQSYP 123

BLAST of Chy4G075480 vs. NCBI nr
Match: AAB82329.1 (seed nucellus-specific protein [Citrullus lanatus])

HSP 1 Score: 157 bits (398), Expect = 5.27e-47
Identity = 83/131 (63.36%), Postives = 95/131 (72.52%), Query Frame = 0

Query: 3   ISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGYKP 62
           + KVLVA+L++SA+AMA LENVEGGREM LK+ TA  Y   L+E YEGYK          
Sbjct: 4   VGKVLVAMLVISAIAMALLENVEGGREMGLKEATANAYPHVLNEKYEGYK---------- 63

Query: 63  KEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDID-HQYNWGPYKKPIAKPKEM 122
                   PKEDYECDGYKY DK+CYEYGNCDKSPYNE+ D  QYN  PYKKPI KPKEM
Sbjct: 64  --------PKEDYECDGYKYKDKNCYEYGNCDKSPYNEEEDDRQYNGSPYKKPIPKPKEM 116

Query: 123 AKKYGVHQSYP 132
           A+KYGVH ++P
Sbjct: 124 ARKYGVHHNFP 116

BLAST of Chy4G075480 vs. NCBI nr
Match: KGN46573.1 (hypothetical protein Csa_005092 [Cucumis sativus])

HSP 1 Score: 120 bits (302), Expect = 2.15e-32
Identity = 68/134 (50.75%), Postives = 85/134 (63.43%), Query Frame = 0

Query: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
           MT  K LVA+L  S +AM F+ENVEG R+M LK+ T     Q L+E  E          Y
Sbjct: 2   MTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKME----------Y 61

Query: 61  KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYN--EDIDHQYNWGPYKKPIAKP 120
            P ED        +Y+CDGYKY DKDCY+YGNCDKSPY+  +D D QYNW  YK P+ KP
Sbjct: 62  NPNED--------EYDCDGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKP 117

Query: 121 KEMAKKYGVHQSYP 132
           KE+ +KY VH+++P
Sbjct: 122 KEVDEKYKVHKNFP 117

BLAST of Chy4G075480 vs. NCBI nr
Match: TYK14008.1 (Seed nucellus-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 112 bits (279), Expect = 5.91e-29
Identity = 64/125 (51.20%), Postives = 78/125 (62.40%), Query Frame = 0

Query: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60
           M I K LVA+L +S + M F+ENVEGGREM LK+ T         + Y G+   E+ +  
Sbjct: 2   MMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEAT---------KAYNGHVSNENVD-- 61

Query: 61  KPKEDYEGYKPKEDYECDGYKYNDKDCYEYGNCDKSPYNEDIDHQYNWGPYKKPIAKPKE 120
                   YKPKE+  CDGYKY DKDCYEYGNC KSPY +  D QYNW  + KP+ KPKE
Sbjct: 62  --------YKPKEEDGCDGYKYKDKDCYEYGNCGKSPYPDYDDGQYNWNSHMKPVPKPKE 107

Query: 121 MAKKY 125
           M +KY
Sbjct: 122 MDEKY 107

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L8T26.4e-6797.73Seed nucellus-specific protein OS=Cucumis sativus OX=3659 GN=Csa_3G630260 PE=4 S... [more]
A0A5A7VLH54.3e-5583.33Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
O223511.7e-3563.36Seed nucellus-specific protein OS=Citrullus lanatus OX=3654 GN=WM403 PE=4 SV=1[more]
A0A0A0KAR71.8e-2450.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109680 PE=4 SV=1[more]
A0A5D3CS371.8e-2151.20Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
Match NameE-valueIdentityDescription
KAE8650853.11.95e-8098.37hypothetical protein Csa_001704, partial [Cucumis sativus][more]
KAA0068070.11.66e-7283.33Seed nucellus-specific protein [Cucumis melo var. makuwa] >TYK26054.1 Seed nucel... [more]
AAB82329.15.27e-4763.36seed nucellus-specific protein [Citrullus lanatus][more]
KGN46573.12.15e-3250.75hypothetical protein Csa_005092 [Cucumis sativus][more]
TYK14008.15.91e-2951.20Seed nucellus-specific protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G075480.1Chy4G075480.1mRNA