Chy4G075430 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G075430
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Spc97 / Spc98 family of spindle pole body (SBP) component
Location	chrH04: 10734166 .. 10736375 (-)
RNA-Seq Expression	Chy4G075430
Synteny	Chy4G075430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGTAAGTTCATTTGGAAACAGAGTTTCTTTCTCGTTATTCCGATAATGTTTGCATTTGTTGTTGATTTGTTGAATCCCTTTGCCTATGTGCTAACTTGCTCATGAAAATCCGAGCATTCTTCTTGTGGATGTTGTATACCTACAATGTTTCTTGTTCTTTTTAAACTTTTTTTTTCTTGGAAAGGATTAATATCTTCTACTTGACCTCGATTGATAACAATGGACGATGATATTGTTTAGTATCCTCATGTTTTGCTGAAATTACGGACATTATGAGCTGTGCGGATTTTTCTTCTTATTTTGATGTATGAGAATTTTTTACTATCATTTTCCAATCATTTTTATTGACACAGTATTATGATGTATGTGGCAGGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAGAAATTTAATTTGAGAACGCTACGTGCTATTGGTATGTTGCATTTATTCCAATTGTATTACCTCTAGTTATGCCTTTTGTCTATTAAGTCATTATTTTAAGCATAGCTAGGTGGACAAGACACCCATTGTCATCCCAAAAGTCAACAATTCAATTCTTCACCCACCCTATTGAGCTAAAACAAAAATATGAATCTCGCTCCTATATTAGTTGTTGAACCGGTTACCATTCAATCCAAATGTCAATATATTTGATCTCCCACTCTTACACTGTTGAACTAGGGAAAATAATTGTCCAGAAAGTAGGTGTAAATTCTCTCTTGGCATCATTATCATACATCCACTCTGTTAGCTATCTTCCATATTAGTTGCTGAACTAATTTTGTATTTCTCATGCTATAAATGTAGGGTTTGTTTTGATGGAACATCTTAAAGGAAAACTTAGGACATCAGATGTTTCAGATCTGTCTCGATCTACCTTAAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATTTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGTTGGTACCATTTACAAGTAGTTGTGTTTGTATTGTTCAAGACCACATTTTGGGAAGAATAGTGAAATGTCATAAAAAACTTTTGACAACTACATTAACCTTTTGGTATTCGTAAAGTCTTCTATTCATATGAATTTTCACGATAGCACTTATGATTGGATAAATAAGTAGTAGATTAGTTTGATCATTTCCGTTCCTAATATTTTTGCTCAGTACTCTGGAGTGGTGGTTGTTTCCATTGTGTTTTCTTATTACGGCACTAGATAGGTGTTTAGAATCATGTTGGAAAGATGTGAGGCCTCATGATCATAAGATACATGAGTTACTTCTCTCATAGTCAATTGGTATAGAGATGAACGTATTCATGTTTATCTTATATGAAATTAAATATATGAAGTCCCGTCAAGTATTTGTTCCAAAAAAGAAAAAAAGAAAAAGACAAAATTTGACCCAAGAAAGGTGAACCCAAAGAGATCTTGAGAGAGGGAGGTATATAGAGGATCTTGCATTAGAAAAACTTACCATGAGATACTCTACTCATTATCAACTAATTTTAGATGGATACCATTTTTATCTATTAATTGGAAGTTTGGAGAAGTACTTTCTTTCTCGCCCCCTACATTCTATCGTTTTCTGCCTTCCTCGAGTGGTCAGATTCATTCGTTCTATTTACATTTGTAGATTTACTAATTCAAATGAATGGTATCATTTGAGACCGTCTCAATAAATAATGGTTAAGAGGTCAAAGATTCAATTGATGGTGGCTACCTACCTAGAAATTAGTTTCCTACGAGTTTTCTTGACACTCAAATGTTGTAGGACTAGACAGGTTGTTTTGTGAGATTAGTCGAGGTGCACGTAAGCTAGTCTAGACACCCAAAGATATAAAAAAACGCATGGTATCATTTGAATTGAACCTTATTATAATTTCGTGTAGGGAACTGTTCTTAATGACTTGCACATTGTGCTTTAGTTTAATTTTGTGCTTCTCAATTTGCATTCCCAACTTTTGAACTCATATTTCTCGTCTTCTTTTCCTTCTCTCCTCTGTCTTTCTAGGCCACGGGAAAAGGTTGATTCGAGTTACAAGAACAGCAAGTCGTGA

mRNA sequence

ATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAGAAATTTAATTTGAGAACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAAAACTTAGGACATCAGATGTTTCAGATCTGTCTCGATCTACCTTAAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATTTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGCCACGGGAAAAGGTTGATTCGAGTTACAAGAACAGCAAGTCGTGA

Coding sequence (CDS)

ATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAGAAATTTAATTTGAGAACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAAAACTTAGGACATCAGATGTTTCAGATCTGTCTCGATCTACCTTAAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATTTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGCCACGGGAAAAGGTTGATTCGAGTTACAAGAACAGCAAGTCGTGA

Protein sequence

MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFNLRTLRAIGFVLMEHLKGKLRTSDVSDLSRSTLNACNLLDSNLEKILSIDEIMASICSDRRKKPGKRPREKVDSSYKNSKS*

Homology

[Close]

BLAST of Chy4G075430 vs. ExPASy TrEMBL
Match: A0A0A0LBP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G633280 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57
Identity = 126/135 (93.33%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFNLRTLRA 60
           MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKF+LRTLRA
Sbjct: 59  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRA 118

Query: 61  IGFVLMEHLKGKLRTSDVSDLSRSTLNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120
           IGFVLMEHLKGKLRTSDVSDLS+ST NACNLLDSNLEKILSIDEIMASICSDRRKKPGKR
Sbjct: 119 IGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 178

Query: 121 PREKVDSSY-KNSKS 135
            REKVD SY KN KS
Sbjct: 179 SREKVDLSYKKNGKS 193

[Close]

BLAST of Chy4G075430 vs. ExPASy TrEMBL
Match: A0A0A0KW48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166940 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 8.8e-56
Identity = 118/132 (89.39%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFNLRTLRA 60
           MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKF+L+  RA
Sbjct: 180 MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 239

Query: 61  IGFVLMEHLKGKLRTSDVSDLSRSTLNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120
           IGFVLMEHLKG+LRTSDVSDLS+S LNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR
Sbjct: 240 IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 299

Query: 121 PREKVDSSYKNS 133
           P+EKVDS YK +
Sbjct: 300 PQEKVDSRYKKN 311

[Close]

BLAST of Chy4G075430 vs. ExPASy TrEMBL
Match: A0A1S3CBX7 (uncharacterized protein LOC103499220 OS=Cucumis melo OX=3656 GN=LOC103499220 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.2e-54
Identity = 115/126 (91.27%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFNLRTLRA 60
           MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKF+L+TLR 
Sbjct: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRT 60

Query: 61  IGFVLMEHLKGKLRTSDVSDLSRSTLNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120
           IGFVLMEHLKG+LRTSDV+DLS+S LNACNLLDSNLEK L IDEIM SIC DRRKKPGKR
Sbjct: 61  IGFVLMEHLKGELRTSDVTDLSQSALNACNLLDSNLEKSLPIDEIMTSICLDRRKKPGKR 120

Query: 121 PREKVD 127
           PREKVD
Sbjct: 121 PREKVD 126

[Close]

BLAST of Chy4G075430 vs. ExPASy TrEMBL
Match: A0A1S3BQH9 (uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.7e-54
Identity = 116/124 (93.55%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFNLRTLRA 60
           MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKF+L+TLRA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 61  IGFVLMEHLKGKLRTSDVSDLSRS-TLNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKG+LRTSDVSDLS+S TLNACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RPRE 124
           RPR+
Sbjct: 121 RPRK 124

[Close]

BLAST of Chy4G075430 vs. ExPASy TrEMBL
Match: A0A5A7UQA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001160 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.1e-53
Identity = 114/124 (91.94%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFNLRTLRA 60
           MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKF+L+TLRA
Sbjct: 60  MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 119

Query: 61  IGFVLMEHLKGKLRTSDVSDLSRS-TLNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKG+LRTSDVSDLS+S TLNACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 120 IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 179

Query: 121 RPRE 124
           R ++
Sbjct: 180 RGKK 183

[Close]

BLAST of Chy4G075430 vs. NCBI nr
Match: XP_011651663.2 (uncharacterized protein LOC101210446 [Cucumis sativus] >XP_011651665.2 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_011651666.2 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_011651667.2 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738444.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738445.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738446.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738447.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738449.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738450.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738451.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738452.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738453.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738454.1 uncharacterized protein LOC101210446 [Cucumis sativus] >XP_031738455.1 uncharacterized protein LOC101210446 [Cucumis sativus] >KAE8650857.1 hypothetical protein Csa_002034 [Cucumis sativus])

HSP 1 Score: 236 bits (603), Expect = 6.12e-78
Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFNLRTLRA 60
           MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKF+LRTLRA
Sbjct: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRA 60

Query: 61  IGFVLMEHLKGKLRTSDVSDLSRSTLNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120
           IGFVLMEHLKGKLRTSDVSDLS+ST NACNLLDSNLEKILSIDEIMASICSDRRKKPGKR
Sbjct: 61  IGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120

Query: 121 PREKVDSSYK 130
            REKVD SYK
Sbjct: 121 SREKVDLSYK 130

[Close]

BLAST of Chy4G075430 vs. NCBI nr
Match: XP_011653427.1 (uncharacterized protein LOC105435221 [Cucumis sativus])

HSP 1 Score: 225 bits (574), Expect = 1.61e-73
Identity = 118/130 (90.77%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFNLRTLRA 60
           MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKF+L+  RA
Sbjct: 1   MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60

Query: 61  IGFVLMEHLKGKLRTSDVSDLSRSTLNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120
           IGFVLMEHLKG+LRTSDVSDLS+S LNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120

Query: 121 PREKVDSSYK 130
           P+EKVDS YK
Sbjct: 121 PQEKVDSRYK 130

[Close]

BLAST of Chy4G075430 vs. NCBI nr
Match: KGN53863.2 (hypothetical protein Csa_019174 [Cucumis sativus])

HSP 1 Score: 225 bits (574), Expect = 1.27e-71
Identity = 118/130 (90.77%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFNLRTLRA 60
           MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKF+L+  RA
Sbjct: 135 MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 194

Query: 61  IGFVLMEHLKGKLRTSDVSDLSRSTLNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120
           IGFVLMEHLKG+LRTSDVSDLS+S LNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR
Sbjct: 195 IGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 254

Query: 121 PREKVDSSYK 130
           P+EKVDS YK
Sbjct: 255 PQEKVDSRYK 264

[Close]

BLAST of Chy4G075430 vs. NCBI nr
Match: XP_008460383.1 (PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460384.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460385.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460387.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460388.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460389.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460390.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_016902549.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo])

HSP 1 Score: 220 bits (561), Expect = 1.40e-71
Identity = 115/126 (91.27%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFNLRTLRA 60
           MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKF+L+TLR 
Sbjct: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRT 60

Query: 61  IGFVLMEHLKGKLRTSDVSDLSRSTLNACNLLDSNLEKILSIDEIMASICSDRRKKPGKR 120
           IGFVLMEHLKG+LRTSDV+DLS+S LNACNLLDSNLEK L IDEIM SIC DRRKKPGKR
Sbjct: 61  IGFVLMEHLKGELRTSDVTDLSQSALNACNLLDSNLEKSLPIDEIMTSICLDRRKKPGKR 120

Query: 121 PREKVD 126
           PREKVD
Sbjct: 121 PREKVD 126

[Close]

BLAST of Chy4G075430 vs. NCBI nr
Match: XP_008450999.1 (PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo])

HSP 1 Score: 219 bits (559), Expect = 2.25e-71
Identity = 116/124 (93.55%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFNLRTLRA 60
           MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKF+L+TLRA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 61  IGFVLMEHLKGKLRTSDVSDLSRS-TLNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKG+LRTSDVSDLS+S TLNACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RPRE 123
           RPR+
Sbjct: 121 RPRK 124

[Close]

BLAST of Chy4G075430 vs. TAIR 10
Match: AT1G80245.1 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 115.9 bits (289), Expect = 2.5e-26
Identity = 61/128 (47.66%), Postives = 89/128 (69.53%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFNLRTLRA 60
           MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KF+L+ LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMEHLKGKLRTSDVSDLSRST------LNACNLLDSNLEKILSIDEIMASICSDRR 120
           +G VLMEH   + R  + + L+ S       L+ CNLL ++++  + I+EI+  IC ++ 
Sbjct: 61  LGLVLMEH--ARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKS 120

Query: 121 KKPGKRPR 123
           KK  ++ R
Sbjct: 121 KKKARKRR 126

[Close]

BLAST of Chy4G075430 vs. TAIR 10
Match: AT1G80245.2 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 115.9 bits (289), Expect = 2.5e-26
Identity = 61/128 (47.66%), Postives = 89/128 (69.53%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFNLRTLRA 60
           MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KF+L+ LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMEHLKGKLRTSDVSDLSRST------LNACNLLDSNLEKILSIDEIMASICSDRR 120
           +G VLMEH   + R  + + L+ S       L+ CNLL ++++  + I+EI+  IC ++ 
Sbjct: 61  LGLVLMEH--ARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKS 120

Query: 121 KKPGKRPR 123
           KK  ++ R
Sbjct: 121 KKKARKRR 126

[Close]

BLAST of Chy4G075430 vs. TAIR 10
Match: AT1G80245.3 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 115.9 bits (289), Expect = 2.5e-26
Identity = 61/128 (47.66%), Postives = 89/128 (69.53%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFNLRTLRA 60
           MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KF+L+ LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMEHLKGKLRTSDVSDLSRST------LNACNLLDSNLEKILSIDEIMASICSDRR 120
           +G VLMEH   + R  + + L+ S       L+ CNLL ++++  + I+EI+  IC ++ 
Sbjct: 61  LGLVLMEH--ARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKS 120

Query: 121 KKPGKRPR 123
           KK  ++ R
Sbjct: 121 KKKARKRR 126

[Close]

BLAST of Chy4G075430 vs. TAIR 10
Match: AT4G00695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-24
Identity = 64/130 (49.23%), Postives = 95/130 (73.08%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFNLRTLR 60
           MEE ++ILKNNR +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KF+L+ LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFVLMEHLKGK------LRTSDVSDLSRSTLNACNLLDSNLEKILSIDEIMASICSDR 120
           ++G VLME+++ +      L  S V +L  S L++CNLL ++++  + I+EI+  IC+ +
Sbjct: 61  SLGLVLMEYVRKRVEDDTSLAPSVVQEL--SLLDSCNLLKTHVDDTVDIEEILTDICNKK 120

Query: 121 -RKKPGKRPR 123
            +KK  KR R
Sbjct: 121 SKKKTRKRSR 128

[Close]

BLAST of Chy4G075430 vs. TAIR 10
Match: AT4G00695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-24
Identity = 64/130 (49.23%), Postives = 95/130 (73.08%), Query Frame = 0


Query: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFNLRTLR 60
           MEE ++ILKNNR +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KF+L+ LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFVLMEHLKGK------LRTSDVSDLSRSTLNACNLLDSNLEKILSIDEIMASICSDR 120
           ++G VLME+++ +      L  S V +L  S L++CNLL ++++  + I+EI+  IC+ +
Sbjct: 61  SLGLVLMEYVRKRVEDDTSLAPSVVQEL--SLLDSCNLLKTHVDDTVDIEEILTDICNKK 120

Query: 121 -RKKPGKRPR 123
            +KK  KR R
Sbjct: 121 SKKKTRKRSR 128

The following BLAST results are available for this feature:

BLAST of Chy4G075430 vs.


Match Name	E-value	Identity	Description

BLAST of Chy4G075430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBP9	1.2e-57	93.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G633280 PE=4 SV=1	[more]
A0A0A0KW48	8.8e-56	89.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166940 PE=3 SV=1	[more]
A0A1S3CBX7	2.2e-54	91.27	uncharacterized protein LOC103499220 OS=Cucumis melo OX=3656 GN=LOC103499220 PE=...	[more]
A0A1S3BQH9	3.7e-54	93.55	uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=...	[more]
A0A5A7UQA1	9.1e-53	91.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Chy4G075430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651663.2	6.12e-78	96.15	uncharacterized protein LOC101210446 [Cucumis sativus] >XP_011651665.2 uncharact...	[more]
XP_011653427.1	1.61e-73	90.77	uncharacterized protein LOC105435221 [Cucumis sativus]	[more]
KGN53863.2	1.27e-71	90.77	hypothetical protein Csa_019174 [Cucumis sativus]	[more]
XP_008460383.1	1.40e-71	91.27	PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo] >XP_008460384.1 P...	[more]
XP_008450999.1	2.25e-71	93.55	PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo]	[more]

BLAST of Chy4G075430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80245.1	2.5e-26	47.66	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT1G80245.2	2.5e-26	47.66	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT1G80245.3	2.5e-26	47.66	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT4G00695.1	2.3e-24	49.23	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ...	[more]
AT4G00695.2	2.3e-24	49.23	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..134
None	No IPR available	PANTHER	PTHR48237	GAMMA-TUBULIN COMPLEX COMPONENT	coord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G075430.1	Chy4G075430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005319	lipid transporter activity