Chy4G074080 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGACACAGACACAAAGCGAGCATGGTTACGTTAGTCCAATAATGATGATGCCAGCATTTGGAACGATATATCATGATTCATGTAACACCCCAAAATTTTCAAGATATTTCGTTATCATTTTATTAATTTTGGGTGTTATTTTGTGAAATGGTTTTAATTTTTGTGGAAAGTAAAGTATTTTGGAAAGATGTGGGGTTAATGGTTGAAAATTGGTAATACTATTGTTATCATTATTAATTATTAAGGAAAGATATGTTATAAGGGATATTAATGAGGAGAGAGGGAAAATTAAATAGGAATAGGAAAAGATGAAGGAAAAGAGGAGTTATTTGTGGAAAATTAGATAATAATAATAATAATGGTATTAATGTTATTATTATTATTAGTATTTTACATATTAAATACACCCTCGGGATGCTTGCCATAGTTACAATTCATCTTCTTCCTCACAAAGAACCCTAGCCGTCACAAAGAAACCCTAGCCGCCGCGAACACCACCACGACGACGGCCGTCGGACGAAGTCGTTCGCCTCGCGTCTCAGTCGGCCAGCCGCACGCTTCCAGCCGCCAGCGTCTAGCCGCACGGGTTCCGGCCTCCAGCGTCCAGCCGCACGAGTTCCAGCCTCACTGGTCCACGCGTCCGTCCTCACCGAGCCGCACGCGTCCAGCCGCCAACGTCCAGCCGCAAGCGTCCGTTTTCACCAAGCCGTACGGGCCGTCTTCGTCCGTACGTAAGCGGTAAAGCCTCAAGGTCCGAGCCGAGCCTCTGCATCAAGCCACTTGAGCTATTTTCATTTGGTTCAAGCCATTCCTTGTTGTGGAGTCACTTTGGTGAGTTGGACTATTATCGATTGTGATGGTACTCCCATTAATTGCCTATTCTATTCTGAATAAATAAAGTTATGGATTTAAGTGGATCTATGTTTTCTTGAAGGAACGAATATAGTTGGAGGAACTGAGACTGTGAATTGTTTCACTTAGGGTTGTGTTGGATTCAACCCTAATCTTCGGGATTGAGTATTGGGAGGAATTGACGGTCAACCAGTGAATTATTTTTAGCGGATCTTCAAGTAAGAGAATTTTTCCCTTTTTGCCTGAGATGCATATTATTGATGCATTATGTGATTATATGTATCTATGAGATTGTGTATGTTGAGCTGAATGTTGATTTTATGATGAGCATGTATAGCCTATGGTGTTCTGTTGGTCTGCTGGTTAGAGTCGTACCACGAGGGGTCCGTTAAGGCCATCCCATATATATGTTTGAGTATTACTGAGACGTGATTCGACGGGATCACTTACAGCCCGACTCTCCTTTAGGGTGACTCCTTCGGGATCACCGAGAGCCCAGTTCAGTCCCGGTGGGACTACTGGATAGCGTGCGTTCGGGAGCACCATAGAGCGTGGTACCTTATTGCAGGACTCTAGCAAGAGACTAACAACACCTAGGGAGACTAAGTACGGGTCTCTTACTGAGTATAATTTTATATACTCATTCTCTCAAATGTTTTAATTTTTCAGGTAAAGATAAAGGCAAGGGCAAGTTGGCGAATGACAAGAAGTGATCGTGGTTCGCCATAGGAAATAATTCAGTTTTTCCGCATTTATGATTCAAGAATTATTCTTTTTAGAACTTTAGAACTTTAATTATTTTAAAATTATTTCTTTTATTTTTATGGGCCCAAATCGGTATTTTATTTTATTATTCTCATTACTTATTTATTTAAATATTTCTCAAAACTTATAAAAAAATTAATTTGCCTTTAAAAAAAAAAAAAAAAACTACATTTTATTTAAACAGTAATGATCCCAACCTTCTAAGAAGGTTGGGGTGTTATAATTCAGGAGTCGGTCAATCATCAGACTTTGGAACAAGATATTATAATTCTGAGGCAGATCCATCATTAAACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCATCTTTAACATGCATGGTCACGGGTGCGGTGTGGAAAACATAATGAACATTTGTACTACGAAGTGCCTGCAGCAGTACCCGAGCAATTAGATAAGCAACAACAACAAGAGAATCAAGAAGAAATACAACAACAAAGAGTTCAGAGTCGACGATGACAACCAACTAAAAATCGTCGACGTCTAGGTTGTGGAACACATTGATCTTTTTTTTCATTAAATAAAAATTGTTAAATTATTGTATTAGACATTTTGTTCCATCTTTTAATTATTTTCCAATCAAAAACACTTACTACAAATTTACGTCCTTCAATTAATACAAAACTAGTGAATTACAACAATAAATATCCATAAATTAGAAAATTAAGTAAACATAAATTGAAAAATTAAAGAAAAAAGTTGAACAAAATTTCATCAATTTAAAAATACAATGAATATACATTTTCAATAAGTTTCAATAACAATAAAATTGGTTTTCATAAAAATTAATTAAAAAAAGATTATTTTCAAATTAAATTAAATGGTGTGAAAATGAAAAAAATGAAAAAAGAAATATAAAGGGCGAGTCTCGCCCTATGAAAGAGAAAGAAAAAAAATAAAACTTTGGTAATTGATGATTAGTTTGAAAACATCAACATTTTGGTAATTAATTTGAGAAAATGAATTATTAATATAATTTTGCCTATAGTGTAGGGTCTATGAATATAATCTAAATCTAACCAATATACTGATAATATTTTAATTAACTTTGGTAACAAAAAAAATTGTAACAACTAATTTTAATCAACAAAATATTTCGTACACATTGATATTTTTTTTATTAAATAAAAATTATTAAATTATTGTATTAGACATTCTATTTAATCTTTTAATTATTTTCAAATAAAAAACACTTACTACAAGTTTATGGTCTTCAATTAATACAACACTAATCGATTACAATGATAAATATCAATAAATTAAAAAATTATCGTAAACATAAATTTAACAATTAAAGAAAAAAAACTGAACGAAATTTCATTAGTTTAAAAATACAATGGATATATTTTTTTAACAAATTTAAATAACAATAAAATTGATTTTAAAACAAATAAATTTTTGTCATTAGAGAGAAAAATAAATTGATATTAAATTTTAAAAATAGAATTTAATTTGTTAACAAAATAAAATTTATTTGTTATATAAAATAAAAGTTGATCTTAAAATTACTTTGAATTATTCAATTGCGTTAAAAAAAAAAAGAAATAGAGACTTGCCCTCTGAAAGAGAAAAAAAAAATTAAACATAGGGCGAGTCTTGAATTATTAATATAATTTTTCACCCTATGAAAGAGAAAAGGACTCACCCTATGAGAGAGAAAAAGAAAAATGTTAAAATAGCTATATTTTGGTAATTAATTTGAAAACAACTATATTTTGGTAATTAGTTTTAAAAATGGGGAATTTTTAAAAACAGTAGATTTTACAAAATATTTACAACCTATAGTAAATTCTATCCCTGATAGTCATTGATATGCTATAATGATAGAATACTATCAGTGATAGAATCCAA GTGACACAGACACAAAGCGAGCATGGTTACGTTAGTCCAATAATGATGATGCCAGCATTTGGAACGATATATCATGATTCATGAGTCGGTCAATCATCAGACTTTGGAACAAGATATTATAATTCTGAGGCAGATCCATCATTAAACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCATCTTTAACATGCATGGTCACGGGTGCGGTGTGGAAAACATAATGAACATTTGTACTACGAAGTGCCTGCAGCAGTACCCGAGCAATTAGATAAGCAACAACAACAAGAGAAATCCAA GTGACACAGACACAAAGCGAGCATGGTTACGTTAGTCCAATAATGATGATGCCAGCATTTGGAACGATATATCATGATTCATGAGTCGGTCAATCATCAGACTTTGGAACAAGATATTATAATTCTGAGGCAGATCCATCATTAAACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCATCTTTAACATGCATGGTCACGGGTGCGGTGTGGAAAACATAATGAACATTTGTACTACGAAGTGCCTGCAGCAGTACCCGAGCAATTAGATAAGCAACAACAACAAGAGAAATCCAA VTQTQSEHGYVSPIMMMPAFGTIYHDS*VGQSSDFGTRYYNSEADPSLNFGQQYYDLGSDPSSLTCMVTGAVWKT**TFVLRSACSSTRAIR*ATTTREIQ Homology
BLAST of Chy4G074080 vs. ExPASy TrEMBL
Match: A0A5A7U558 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00220 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 7.6e-20 Identity = 52/64 (81.25%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of Chy4G074080 vs. ExPASy TrEMBL
Match: A0A5D3BUX8 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00210 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.7e-19 Identity = 51/64 (79.69%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of Chy4G074080 vs. ExPASy TrEMBL
Match: A0A5A7SU33 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00810 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 6.4e-19 Identity = 50/64 (78.12%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of Chy4G074080 vs. ExPASy TrEMBL
Match: A0A5A7U5S8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00410 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 6.4e-19 Identity = 50/63 (79.37%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of Chy4G074080 vs. ExPASy TrEMBL
Match: A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 6.4e-19 Identity = 50/64 (78.12%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of Chy4G074080 vs. NCBI nr
Match: KAA0050314.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK03531.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 104 bits (259), Expect = 1.02e-25 Identity = 51/64 (79.69%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of Chy4G074080 vs. NCBI nr
Match: KAA0050408.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa] >TYJ97999.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 105 bits (263), Expect = 2.93e-25 Identity = 52/64 (81.25%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of Chy4G074080 vs. NCBI nr
Match: KAA0047564.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK14961.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 99.4 bits (246), Expect = 2.95e-24 Identity = 49/64 (76.56%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of Chy4G074080 vs. NCBI nr
Match: TYK04066.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 98.2 bits (243), Expect = 3.24e-24 Identity = 48/63 (76.19%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of Chy4G074080 vs. NCBI nr
Match: KAA0051233.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 102 bits (254), Expect = 1.40e-23 Identity = 50/63 (79.37%), Postives = 53/63 (84.13%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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