Chy4G070920 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G070920
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	myosin-11
Location	chrH04: 3300821 .. 3312481 (-)
RNA-Seq Expression	Chy4G070920
Synteny	Chy4G070920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACGACGATTACAATGACCTTGACATGGGGTTCTCACTCTCTGTCCTTTATGCTTTTTCTCCAATCCATTTTATGTTGTTCCTCTGCTCAACTGGTTTCTTAGAAAATTTGTCAAATGCAAAACCCTAATCTCGATACTAAAGTTCATTCTTTCAACTCCAGTTCATAATGGATTTATAGGCCTCTTGCTGCATGTGCATCCACATGAAATCTTCATTAGGAACTTCCATGAATTACTGAGGCTTCTATTCGCTTTATTCCCTGTTTTTTATGCCCCCTTTTCTTTTGCATAAAAAACTCAGCCCTGCTTCTAGAATACAGATTGCTGTACCAGCTTTATTTATTTATTATTTTGTCTGTTAAGTTAGTCACTGAGATACCATGGGTTAGTGCTTTGCAATTTGCATCACGTTTTTCTTTATTTTTTGTTAAATGAGTTTTATTAATCGTGCAAAATGTACACATGGAAAGCAGATAAATGAAATATAATTGTAAAAACTATTCATGAGGATTTGAATTCCAACTCTTGAGCCTATGGACAGTGATTTGTTATTTGAATTGGATATACTAATATTTCATTCTTAGTTATTGTTTTGACCACACTGCCCACTGGTATTATCTTGGTTTGTGAAAGGCCCTTATATTTTCATTTAGGATGATTTGAAGGTGCAAATATCTTTCAGCTCTTATATTAATAAGGGGTTTTTGCTGCAGATATGAGGATGAGCCACAAGAACCCGAGATTGAGGTAAGAAATAATTAATTAGTTCGAGTATTTTTGAAAGAAAGTGCACTACTGATCTTTTTGCAGTTGATTAATTATAGTGAAACTGTGAATGATGTATAGGAAGGTGCTGAAGAAGAATTGGATACTAACACTGATGATGTTCCTGGTGAACCCGTTGAAGCAGAGGAAAAGGAAGATGAAGAACCTGTTGAACGTGTGCGTAAAACCTCAAAATTTATGACTAAGTATGAACGTGCTAGAATTTTGGGTACACGCGCCCTCCAAATCAGGTTCTCTTTTTTTTTTATATTTGTTTCATCTAATTTTTGCATTCATCAAGTTTGTCAATGATTTGATGATTCTTTTTCCTTTTGAGCAGCATGAATGCTCCTGTGATGGTTGAGTTGGAGGGTGAGACTGATCCACTTGAGGTTAGATTTTGAAATGTTAAGCTAATCTATGAAAAGCTTTCTTATGGTTTTTGCATTCAGTAGATGTATTTTAGTTTCCCCATATGTCCTATATGTTTATGATGGTTGGTATGCGTATGCATACATGGAAGTAAAAGGTTAACTTACAATCCTACAAAATTGCAAGTTAGGGGTTAAAATGAATTTTTTCAAATAATCAATTTTTTAAAAATCTGAAGAGGCTTATGTGTCGAGGCAAGGCTCTAAAGTTTAGTACCTTCATTCAACCATAAGAGGGTTATGCCTCTCATAGAAGAAGTTTATGTCTTTGTGAAAGCTCATTCTCTCTTAGAAGAAGTTTAGGTCTATGTGAAAGTTCATCCTCTCGTAGAAGAAGTTTAGGTCTATGTGAAAGTTCATCCTCTCGTAGAAGAAGTTTGTCTTTGTGAAAGCTCATCGAGACTGAAAATCTCTAGGCCTCGTCTAGTAGTTAATCAATCATACTAATGATAACATTATCATAGAACCCGAATATATTGAAAGAATAAAGGTGAACGATAATGAAAATACAAGATGAATTAAGTGTTCATGGTACTTGACTCTCCCAATCTTGAGATACTCTCAAGCCCTACTTCATATACCAAAATATTGCTCACCTTCTCCATACGCCTCCCCTTTATTTATAGCCAACTTCCCTAACATACTCTCGAACTAATTCCTAATATACTCATAATATTCCTTTAATACCTTACTGTCGTTATCGGCCCCTAAAACACCCTATGTCATCAAGGTGTGGGTAGCAAACCTTTTTTTCAGCCTTGGAATTAATGTGGGCTTCAATCAATTCCTTTGAACTCAATATGCATCCCACAGACCAAAACCATGTGCCTCTGATTTTCCAACATTTGGTCCCACCACCCAGATCTGCATGTGGGCATCAGTTAGTTTGCACATCTCTTCACGCAAATTGCTTCTTCCTCAAGATGCACGGAATCTGCCCCTTCCCCATGATTGCTTCTCCAGCCACCGTAGAACAACATTTTTTGATGTGATCAGCACCTCTGACCACTATGACTCATCATCATTTGCCATATACAGTATTTTTTACCACTGTAGCGGAGCCTTGTTTGCCATAGAAGCGGGGCAGTTGCTCCCTCAGCATTCTTCCTGTCTTCAACTAGCATGATTGTTAGCGAGTCCTTCTGCCATCTTCTCTTCATCTACTGACCCTTTGTCATCTCAGCCAATCAACAGCTGACAACTTCTTTCTTCATTAGGTTGTCCATTTGTTTTGCTAATCATTGGATAATCGAAAAGTTCTGCCATCATTTCCTCTTCGATTTCCTTTTCCTCTTTCTTGTTCCGTTCTTTCACCAGCTGTGTTGCTTCTCTGACCTCAACGAGCCTTTTCTCCATCTATCTCGATTCTTTTTCTTTTTAGTATGTTTATCCTTCTTTTGTTCTTCTTGCTGCTTTCTTTTCTTTACATATTTATTTTTCCTCTGCCAATTTTGCTTTGTTTTCCTTGGGTCTGCTGCTCTTATTCTATTCTGGTTGTATTTGAAGTTTCGCACCTCTGTCAACGATTCAAGTTTGACAGCCTTTTGTTCTTGAGTTTCTGTATCTTGAAGGTTTCTCGAGATGCTTACATTTGATCGATTTCTTTTCAATTAGATATTGGTTCCACTGTTTCCAACAGAATGACTCTTCTTTCACTTCTTCTACATTCAATAAGACTCTTGATTCTTTGTTTCCTTTCTTTGCGAATTTGATTTCCTTTTTTCTCCCTATTGCAGTCTCTCCCCTCTCTTTGAGAAACTCTCATTTATATGACCCCTGCTTTTCTTCCTCTTGTTGAATTCAGAATATGGATTCCATCTCATTCATCGATCCATCCAAAGAACCATATCCATCAACAGTCTCTTCGTAACTTTGCATCTAACTCCATGGAATCAAACAACTCTGCACCAAATTGATAGAATTCGAATCTATTGAAAGATGAATGATAATAAAAATAAAAGATAAACCAAGAGTTCAATGTACTTGGACCCTCCCAATTTCTCAAGCCGTAATTCGTTTTCCAAAATATTGCTTACCTTCTCCATTCCCCTCGGCCCTCCCCTCTATTTATAACCAACTTCATTAACTCCCTTTCTAATTACTAATATAACCCTAATATTCCTCAAATACTAACCCTATCGTATTAAAGATGTCTTTTTAGAATTATTTATCAAGTCAAAATATGAGGTTATTTTATTTATTTATTTTCTTACCAACACTTTTATATGAGTATAATGTTTTGCAATATTTGGTCATACTAATTTAGAATTTGTAAAATGTTGCCTTTTAGCATTTTAAAACATCGCAAAAGGTAGGGTATAATTGAAAAGAACTTCAAGTTTAAAGGTAATTTGTATATAGACTGTCTAGTGTATAAAATTTTCAACTAACCCATGATGAACCAAGATAATTTGTTGGATGACATTCATGAGTTTCGTTTACTTAGTTGCTAAAACTGGTAGTACTGTTTACTGTTTGTATTTAATAGCTTATGCTTTTCTGGAGAATAAGGATTTATGCTTTTCTATTATTCTTGTAGATGTCAATTTCATGCTTTTCCATTATTCTCTTACATGTCAATTCTCATCTAATCCTGTGCTGTCTTAGATTGCAATGAAGGAACTTCGTGAGCGGAAGATACCCTTCACCATCCGTCGCTACTTGCCAGATGGAAGGTTAGATTTGCTTCTTAGATGTCTTTTATCTTTAATGTTCGGAATGGATTCATCTGCTAAGGGGCACAATGATTTGCATCTAAGTACGATATTTGAATTTTTAGCCGAATTCTAAAAATAAAAACAAATTTTTAATAACTATTTTTTCTTTTTAGTTTTCAAATATTGGCTTGGTTTTTAAAACCATTGGTTAAAAGTAGATAACAAAGGAAGAAATTTGGAGGTGAAAGTAGTGCCTATAGGCTTAATTTCAAAAAACAAAAACAAGAAATAAAGTGGTTACAAAATGAGCCTAAGTTTGCACTTGTAAAGCATTACTGAAATTCAGAGGTAAAACAGGCGTTTGTTTAATTTCCAAAAACAATACTAGACAATCAAATAATTACCAAGCATGGCCTTAGTTTCTAGTTTTGAAATTTGGTCAAAGTATTGAAATGTTTAATTAGAAAATATGAAAACCATGATAAAGAAGTTGTAACGAAACAAACACAATTTTAAAAAACCAAAAACCAAATAGTTCAAATGGTGTTATCAAATGAGATCTAAGTGTAGCTAACTTGTTTGGTTTCTATAACTCTACCAAGAAGTTTTAGTTTGTTTCTAAAACAACTTCCGTATAAGCGAAATTTGTTTATGTTAATTTTGATCAGTTATGAAGACTGGGGCGTTGATGAACTGATTGTGGAGGACTCTTGGAAGAGGCAAGTTGGTGGTGCTTGAATTTTGATGTTTTTGTGAGATAATATAGCTTTTCTGTCAATTGCATAGCATAGCCGATTTGTTCGCTCCTTTAATCAACTTGTGAATGTTGTGGTCGTTGCATAACTTATCTATAATATTGGAATGAAATCACTTTTGAGAAACAAGCATTTCTTGTTTGTTTATAACTAAACATGCCATTAACACTTGAATAGCGTTCATTAACCAAAAACTTTGTGTCTTAATTGCTCTTTCTGACTTCTAAAGAAGAATACAAATTTGTTTAAAAAAGATTTAAAAGTACTTCTGTTGTGTTGTCGACTTGTGTTTGCTTTATGTTATGATTCGGTTTTGGTAAGGTCTACGTTGGTCTTGATTTTCATTTTTATACGGAAATTCCCTTGTATTATTTCTTTAGGTGTTTTTAGGTTTCATTTTGTGTTAATTTAACCTTTTTACCCTTCTTTCAATTTTAATTTTTTTTTTCTTATTAACATTATTTTTTAAATTTTGAATTATTTTTTTTGTTATTTATTAATTTTGGTTGATATTTATTCGATATTTCAATTTTTATTTTTAAATTTTAGGAGATTTTATTTGTTTATTTTTTCTTATTCTTGGTGAGAATTGATCACCTTTTCCTTGATAATCTTCTTCCTTCTTTTTCAATATAGTACAAGATGCATAAATAATGTGTAATATTTTGTGGTTTTTTTTTATGAACAAACTTGGGTCATTTTTTAAAGTAGCAAAATAAATTAAAATATTTATAAGCTATAGCAAAATTTTGAATATGGTTGTCTATCAATGTCATTAATAGAATCACTGTACATCAGTGATGGACAACGATACTAATTATTTTGAGTGAGGCTTTTTTCCACATGTGGGGGAGTTATTTTGATAATTTTACTTAACTCAGATGTTAACAAAAAGTCATATGATATTTTCTTTAAAAGAAAATGAACAGTTTGAGTCATTCATCTAGTGCATCCATTATTTTCTCATTTTAAGCTATTTTCTTTATGTAACTATTTCTTATTCTCTATAAAAACCCTTTTTTTTTTTTTTGAAAAGGAGCCTTTCGAGAAGTTCTTATCTCGGAGAAACTTTTAGTAAAGTAAATGAGAAAAGATTTCGAGGGTAAAATAATAGCTAAAAACGAGAAAGTTTGGATAACAACGTAGTCAAATCTATTTGTTTGGATAATCATTTTAGGTTAATTGTAGTAGATATGAGTGTTCAAATACTCGACAATTCGAATAACTCGATCTACTCAATCCGAATTATAAATGTTGGATTTGGTTGATTTTTTTTTTTTTTTTAAAATTTTGGATTAAGTTGGGTTTGGGTTACATTTTTTAAAATCTAGTTGACTCAACTCAGCTCAAATTTCTAATATTATTAAAATATATATTACAACTTATAAATATTATAATTCATACATATTATTATCATCTTTTTTGTAAGTTAGTAATAAATATGATGAATTTTGATATTTAACATTTAAGTTTTATTAAGTTTTAGTTATTAAAACGTGTCGTAAACAAATTTAAGTATATTGAATCAATAAATAATATATTTAAAAAAAGAAAAGAAAAGAAATAAATAATCCGACAATTCAAAATTCGTGTTGATAAAAAAAAAATCACCCATTTACACTCCTAATAATAGATAATAATTTTAGAAATAATAAATGTAATTTTTTAAAAATAAACATAACAAAATATATAATATGAATGGTATTATTTACAAATTTGTCCCATAGATTAAAAGAAACTATAATATACATATAAATGAAATAGTATAGTATTAGGGGATCCGACCTTGTGAGTTGATACACCCCAAGAGGGGACACCGAAAAATGAAATGATATGGTAATGGTTGTAATGTAATAAAACGATGTATATATTTATTATTAAGAACGTGTGTGTCAGCCGAGCCTATTATTGTGGCTCCAAAAACGTGTGGCCTTCAATCTTCACACGTGTTTGGCACACCACCTTCCATACAATAAATATTCTTCCAACATAATTAATTATATATATAAATGAAAACTATACCTTTTCTTTATCTCTTTGTTTCTAAAGCATTTAAAATAACTTAAAGTTACCCACCCAAAATCTAAACAAATAAAGAGGTTTAAATAGGTTGGATTAATGAGATTTTGTAAGATCAACCCAAATGAGATTTTGCAATCGGACCGAATCCTTACCGTTTGAGTTGGATAGTCTAAGTTGTTTAAGTTATCGAATTATTTGAACATAAGTATAAATAAGATTGTTTTGAAAATACAATTGTCTGAGTCTATCATATAGATTTTTATGTATTTATAATTTTTTTTTAAGATTTTGTTATTTAAAATAACTTTTTTTTATTAAATATTTTGTCAAAATAAATATAACTTCAATATCGAAATTAAGAGGTTGGATTATTTTAGGGAAATTTTTAAAAATAGTAGATTTTACAAAATATTTATAACCTATAGCAAATTCTATAATTGATAGTCATTGATATGCTATAGTGATAAAAGTTTATCAGTGAGAATCCAAAATTTTGTTATAACTTGTAAATATTTTAATTTATTTTACTATTTTTAAAAATTTCATATTATTTTATTCGTGGTTTTTTTTTTCCTCGCGAAAAAGAACCTCTATTATATTCCTTTCTATAAATTTAAAAGCATATTTATATTCTACTTTATCTTGCACAAAAATCATCAACATCAACGTTATTATTATATTTTCACTATTATCATTATAGAACATATTATATTTTAGTCATCATTTAAGGCTGTGTCGAGTTGTAGACGGAAGAAATAGATATTATAAGAATGTGGAAAGACGTGAGTATTAATACCACTATGTTATTACTCTTTTTAAGGTCATTATTTTTAAAACAGTTATTGTTTGCATTCTCAAAGAAACTTCATATTATCAAATAAATATCAACATAAATTTTTTCCTTAAAATTTTTACTTAAAATATCATTTTAGTTCATTTCTTCTTTAAAATATGGAAAAAAAAATTAAAACTATTTACAAAATATAGAAAAATCTATTCAATTCAACATATTTTATTTACTTTGTTGTATTTTATATATTTATTTAGTGTATTTTCTAACCTAAACATTATTATTATTGAATTAAATATGATTAAAAAAATTAACTTTAAAAAACTAACCACTATTTCTAATTAGATATCAAACAAATGTTTGATTTTTAGTGGTTGCATTTGCATTTGTTTTTTTTCTAATTATTAAAAACCATATGAAATTTAAATTTAGGATTTATTCAACAAATTCAAAATAAAAGATGATTAATTAAATGTTTTTATTTCTCAAAAGAACTAAATATGTAATAGTATTGCCACGTGGCATAACACGAATGGTTAAGGTATTATAAATCCAAAAAAGAAAGCGGACCAAAATTGGTGCAAGTTAGAAGAAGCTAAAATACGCCTCCTACCATTTTTCTTTCCCTCCTTTCATTTGCTTTTCTTTGTCTCCAATTGCTTTCCTTCAACAACACTCTCTTTTTGCCTTCTCTCCTCACCTCTCATTTGTTTCTGCTCTTTCATGATCTGCCATGAAACCTTAGGGCTCTACTACTTGATCCTCTCGTGACTTTGAAACTGAATTCCCTCTTCATTTTTATGCCTTCCTTTCTCAGATTGATTCCCTAACCAACAACAATTCGTCTTTCTTTGTGCACGGATGTGCTCCACCGGCGTTTCATGGCGTCTCCGGCGGCTACTCATCTCAACTTCTCCAACTCTTCCTCTATCTCCCAGTCTCAGGTCCTCTTCTTTTCTATTCTTATAGTTTGTTTTACTCTTTCTTGAAGTCCGGGAAATTTTTATGTCGTTTTTGGCTTTGAGTTTATTAGCCTGGATTTTCCTGGAGTTCTTCGGATGTTTTGGTTTTTTATTTTTTTTTAATATATGGCGAAGTTACTAGAGTTGTTATTTAGAAGGAGATGAACTTCTTGGACCGATGAAGATTGAAGTATATTATCGAACTCTTTTTTTTTTTTACTTCTATTTTCTTGACATGTTATTACATTTGGATTTCTGTTTTCGAATGATTTGGATCGATATTAACTTCTTGGACCCATTAAGATTTGAAGTATATTTTAGAATTCATTTTTTACTTATATCTTCACATTTTGATTTCGGTAGTAGATTTGTTACCGAATGATTTGTATCGAAATTAACTTCTTGAACTGATAAAGATTTGAAGTATATTTTAGAACTCATTTTTTACTTGTATCTTCACATTTTGATTTCGGTTGTAGATTGTTGTTGAATGATTTGTATTGATATTAACTTCTTGAACTGATAAAGATGTGAAATATATTTAGAACTCATTTTTTACTTGTATCTTCACATTTTGAGTTCGGTAGTGGATTGTTGTGGAATGATTTTGGATTGATATTAACTTCTTGGACCGATAAAGATTTTGAAGTATATTTTAGAACTTCTTTTAGGAAATTTTTTTGTCGTTGTTGTGTTATTACAGTCGAATGATTGATGTGCACATTTCTCTCCCTCTTACTTTTACAATTTACACTACTGTAGGGATCGTTTATGTCCATACAAATCCTAGTTTGATTAATTGTATTTCCTAATATGCATTTTTTGTCAATTGATTCTCTTTCTATTAGCTGTAGGAATCTTTTGCTTTGTTTCTGTTCATGTCTGCTTTTGATCATTTTATGTAACTTGAAAGTAATTTGAACTAGATAGTCATGGTTTTCTCTATTATTTCACTAGAATTTCCGAAAGTAATTCTGTTGCATTTGGTTTACTGTGTATAGAGGTCATCTCTGAGGTTCAGTAGGAATCGGACAAATTTTTTTTATAGCACAAATCAGAAGAGAAGATCTCATCCCCTGAAGGTTGTCCAGTCAGTCCTGAATAACTGCAAGTCAAATTTAAACGACAATGGAGCAAATGAAGAAGCAAAACTGCTTCTGGAGAGATTGTATGCTCAAACACAGAGATTGGAAGAACATGTAAGCAAAGATCCTCACTTCCCACAAGATGTATGGCTAGGGCTCAGTCTTGAAAATTTCGAGTCTGATCTCCAGGCTGCATTGGCAGTATTGAAAAAGAAAGAAGAAGATCTACAAGATGCAGAAAGAACGATTCTACTAGAACGAAGTCAATTAAACAATGCGAGGGAGAAGTTGGAGAAGCAGGAGGAAGAAATTACTGTTGCTTATCGTAAACAGCAAGAATTAGAAGATGAGCTTAAAGAGGCAAATCTAAACTTAGCTTCTCAAGCTAGACTGATTGACGAATTAAAACTTCAAATTAGGGAGAAAGACGAGGGGATTGCTGCAGTTGAGTCTGCCCTTGCTTTGAAAGAAGATGAGTTGAAGAGAATGAGAGCTGATTTGGCTATGAAGAGTGAAGAAGCTTTCAAGACAAACTGTGAACTTAAATCTAAGTCCCAGCTTCTGACGGAAGCCAACGAAGTCGTGAAAAGACAAGAAGTTGAGCTACAAATGCTTAAAAGGACTGTGGTGGAGAAAGAAAAAGAACTTGAACTTTCTGTAAAGCTGCAAAAACTTGAAGTGGAGAGACTGGAAGTTGTAGAGAAAAATTTGGAGAAGAGGACCATGGAATGGTTGTTAGCACAGGAGGAATTGAAGAAAACGAGAAAGGAGGCATCTAAGAAAACAGTAGAGATGAATAAAACCGTGAACGACTTAAACCGAGTAAAGAAGCTTCTCGCCGATGTAAAAAGTGAGTTGGTTTCCTCTCAAAAGTCTCTTGTGTCCTCCAGAAAGAAAATTGAAGAACAAGAAGATATTCTTGAGAGGCAAATGGCAGAACTTGAAGAACAAAATAAGGGTATCAATGCATATATGTCGAGTTTAAAAGATGCTCAAATCGAAGTAGAGAGTGAAAGAGTAAAGCTTAGATTCGTAGAGGCCCATAACAAGGAGCTCGAGGGTGATTTGGTGAAGGAAAAGGAGCTCACTGATGAGCTACAGCAACAACTGAAGAGAGAGAAATCCTATCTCCAGCAGGCAACTGAGGAGAAATCACTTCTACAGAACGAGCTAGAGCATAAACGTATCGAGTTCGAGAAAACTCACAAACTCCTTCAAGACAAAGCGTCGGAGTTGGTCGAGGCCAAGTTAGAAATCCAGCATTTGAAATCCAAACAGGTTTCTCTTCAACTTCTTCTAGAGGAGAAAGACTTGGAAATACTTGATGCACAAAAGAAAATCGAGAATTTAAATCAGGAAATCATTGAGCTACAAACACTTATGAGTAGTAAAGAGGCCCAGCTTGATCAGACAAATGCTATGCTGAAAGAGAAAGATGAACGTGTTGAGATAATGCAGAACGAACTAAACGATACAAAGCTGAAAATTTCCGAAGCTGAAGCAGCAGTAGAACACATTGTGGATCTCACAAATAAATTGGTGATCTCCATCAAAGACGGCGACGAAGACGATGTTTTGAAACTGAACGAAAACCTTAGCCTCAATCTACAGCAGCAGTTATTCAAGAAACCTACCGATAACATAAGATTACAGAAGAAACAGCTCGAAACCGAGCTAGAACTCACCAAGGAAAGCTTGAGACGTAAAGAAATGGAGATTCTAGCTGCAGAAAGAGCCCTGACCGTTAAAGACGAGGAACTAAAAACGGTTCAGGAAAGATTAGATGGAAAGGAGAAAGAATTCGAGAAGATGAAGGAAGAGATGGATGAAGAAGGCAAGCATCTGAGGGAGCAATACACATTGGCACAAGACAATGTTGGAGGAGACTTGGCAATTGAAAGGCTTCAATTTGAAGCTGCTCAGTTAGAGGTCGAAGCAGCTACTAGCGCTCTTCAAAAACTCACGGACATGAGCCGAGATCTTCTGAATAAAGCTGGTCGTAGCCTCGAGGCCGATATCGGATCAAGAAGCATTCGCATTCAGCAGCACGACGACGATAACAACGGCGTGAATGGCATTGATAATAGTAACTCAAGATTCAGTGAAGTGAAGGTAGAAGTTTCCCGTCTTTCATCTCTAACTGAACAGCTCTTGAAGGAAGCTGGTATATTTGTTGATGCGGATTAG

mRNA sequence

ATGGCGGACGACGATTACAATGACCTTGACATGGGATATGAGGATGAGCCACAAGAACCCGAGATTGAGGAAGGTGCTGAAGAAGAATTGGATACTAACACTGATGATGTTCCTGGTGAACCCGTTGAAGCAGAGGAAAAGGAAGATGAAGAACCTGTTGAACGTGTGCGTAAAACCTCAAAATTTATGACTAAGTATGAACGTGCTAGAATTTTGGGTACACGCGCCCTCCAAATCAGCATGAATGCTCCTGTGATGGTTGAGTTGGAGGGTGAGACTGATCCACTTGAGATTGCAATGAAGGAACTTCGTGAGCGGAAGATACCCTTCACCATCCGTCGCTACTTGCCAGATGGAAGTTATGAAGACTGGGGCGTTGATGAACTGATTGTGGAGGACTCTTGGAAGAGGCAAAGGTCATCTCTGAGGTTCAGTAGGAATCGGACAAATTTTTTTTATAGCACAAATCAGAAGAGAAGATCTCATCCCCTGAAGGTTGTCCAGTCAGTCCTGAATAACTGCAAGTCAAATTTAAACGACAATGGAGCAAATGAAGAAGCAAAACTGCTTCTGGAGAGATTGTATGCTCAAACACAGAGATTGGAAGAACATGTAAGCAAAGATCCTCACTTCCCACAAGATGTATGGCTAGGGCTCAGTCTTGAAAATTTCGAGTCTGATCTCCAGGCTGCATTGGCAGTATTGAAAAAGAAAGAAGAAGATCTACAAGATGCAGAAAGAACGATTCTACTAGAACGAAGTCAATTAAACAATGCGAGGGAGAAGTTGGAGAAGCAGGAGGAAGAAATTACTGTTGCTTATCGTAAACAGCAAGAATTAGAAGATGAGCTTAAAGAGGCAAATCTAAACTTAGCTTCTCAAGCTAGACTGATTGACGAATTAAAACTTCAAATTAGGGAGAAAGACGAGGGGATTGCTGCAGTTGAGTCTGCCCTTGCTTTGAAAGAAGATGAGTTGAAGAGAATGAGAGCTGATTTGGCTATGAAGAGTGAAGAAGCTTTCAAGACAAACTGTGAACTTAAATCTAAGTCCCAGCTTCTGACGGAAGCCAACGAAGTCGTGAAAAGACAAGAAGTTGAGCTACAAATGCTTAAAAGGACTGTGGTGGAGAAAGAAAAAGAACTTGAACTTTCTGTAAAGCTGCAAAAACTTGAAGTGGAGAGACTGGAAGTTGTAGAGAAAAATTTGGAGAAGAGGACCATGGAATGGTTGTTAGCACAGGAGGAATTGAAGAAAACGAGAAAGGAGGCATCTAAGAAAACAGTAGAGATGAATAAAACCGTGAACGACTTAAACCGAGTAAAGAAGCTTCTCGCCGATGTAAAAAGTGAGTTGGTTTCCTCTCAAAAGTCTCTTGTGTCCTCCAGAAAGAAAATTGAAGAACAAGAAGATATTCTTGAGAGGCAAATGGCAGAACTTGAAGAACAAAATAAGGGTATCAATGCATATATGTCGAGTTTAAAAGATGCTCAAATCGAAGTAGAGAGTGAAAGAGTAAAGCTTAGATTCGTAGAGGCCCATAACAAGGAGCTCGAGGGTGATTTGGTGAAGGAAAAGGAGCTCACTGATGAGCTACAGCAACAACTGAAGAGAGAGAAATCCTATCTCCAGCAGGCAACTGAGGAGAAATCACTTCTACAGAACGAGCTAGAGCATAAACGTATCGAGTTCGAGAAAACTCACAAACTCCTTCAAGACAAAGCGTCGGAGTTGGTCGAGGCCAAGTTAGAAATCCAGCATTTGAAATCCAAACAGGTTTCTCTTCAACTTCTTCTAGAGGAGAAAGACTTGGAAATACTTGATGCACAAAAGAAAATCGAGAATTTAAATCAGGAAATCATTGAGCTACAAACACTTATGAGTAGTAAAGAGGCCCAGCTTGATCAGACAAATGCTATGCTGAAAGAGAAAGATGAACGTGTTGAGATAATGCAGAACGAACTAAACGATACAAAGCTGAAAATTTCCGAAGCTGAAGCAGCAGTAGAACACATTGTGGATCTCACAAATAAATTGGTGATCTCCATCAAAGACGGCGACGAAGACGATGTTTTGAAACTGAACGAAAACCTTAGCCTCAATCTACAGCAGCAGTTATTCAAGAAACCTACCGATAACATAAGATTACAGAAGAAACAGCTCGAAACCGAGCTAGAACTCACCAAGGAAAGCTTGAGACGTAAAGAAATGGAGATTCTAGCTGCAGAAAGAGCCCTGACCGTTAAAGACGAGGAACTAAAAACGGTTCAGGAAAGATTAGATGGAAAGGAGAAAGAATTCGAGAAGATGAAGGAAGAGATGGATGAAGAAGGCAAGCATCTGAGGGAGCAATACACATTGGCACAAGACAATGTTGGAGGAGACTTGGCAATTGAAAGGCTTCAATTTGAAGCTGCTCAGTTAGAGGTCGAAGCAGCTACTAGCGCTCTTCAAAAACTCACGGACATGAGCCGAGATCTTCTGAATAAAGCTGGTCGTAGCCTCGAGGCCGATATCGGATCAAGAAGCATTCGCATTCAGCAGCACGACGACGATAACAACGGCGTGAATGGCATTGATAATAGTAACTCAAGATTCAGTGAAGTGAAGGTAGAAGTTTCCCGTCTTTCATCTCTAACTGAACAGCTCTTGAAGGAAGCTGGTATATTTGTTGATGCGGATTAG

Coding sequence (CDS)

ATGGCGGACGACGATTACAATGACCTTGACATGGGATATGAGGATGAGCCACAAGAACCCGAGATTGAGGAAGGTGCTGAAGAAGAATTGGATACTAACACTGATGATGTTCCTGGTGAACCCGTTGAAGCAGAGGAAAAGGAAGATGAAGAACCTGTTGAACGTGTGCGTAAAACCTCAAAATTTATGACTAAGTATGAACGTGCTAGAATTTTGGGTACACGCGCCCTCCAAATCAGCATGAATGCTCCTGTGATGGTTGAGTTGGAGGGTGAGACTGATCCACTTGAGATTGCAATGAAGGAACTTCGTGAGCGGAAGATACCCTTCACCATCCGTCGCTACTTGCCAGATGGAAGTTATGAAGACTGGGGCGTTGATGAACTGATTGTGGAGGACTCTTGGAAGAGGCAAAGGTCATCTCTGAGGTTCAGTAGGAATCGGACAAATTTTTTTTATAGCACAAATCAGAAGAGAAGATCTCATCCCCTGAAGGTTGTCCAGTCAGTCCTGAATAACTGCAAGTCAAATTTAAACGACAATGGAGCAAATGAAGAAGCAAAACTGCTTCTGGAGAGATTGTATGCTCAAACACAGAGATTGGAAGAACATGTAAGCAAAGATCCTCACTTCCCACAAGATGTATGGCTAGGGCTCAGTCTTGAAAATTTCGAGTCTGATCTCCAGGCTGCATTGGCAGTATTGAAAAAGAAAGAAGAAGATCTACAAGATGCAGAAAGAACGATTCTACTAGAACGAAGTCAATTAAACAATGCGAGGGAGAAGTTGGAGAAGCAGGAGGAAGAAATTACTGTTGCTTATCGTAAACAGCAAGAATTAGAAGATGAGCTTAAAGAGGCAAATCTAAACTTAGCTTCTCAAGCTAGACTGATTGACGAATTAAAACTTCAAATTAGGGAGAAAGACGAGGGGATTGCTGCAGTTGAGTCTGCCCTTGCTTTGAAAGAAGATGAGTTGAAGAGAATGAGAGCTGATTTGGCTATGAAGAGTGAAGAAGCTTTCAAGACAAACTGTGAACTTAAATCTAAGTCCCAGCTTCTGACGGAAGCCAACGAAGTCGTGAAAAGACAAGAAGTTGAGCTACAAATGCTTAAAAGGACTGTGGTGGAGAAAGAAAAAGAACTTGAACTTTCTGTAAAGCTGCAAAAACTTGAAGTGGAGAGACTGGAAGTTGTAGAGAAAAATTTGGAGAAGAGGACCATGGAATGGTTGTTAGCACAGGAGGAATTGAAGAAAACGAGAAAGGAGGCATCTAAGAAAACAGTAGAGATGAATAAAACCGTGAACGACTTAAACCGAGTAAAGAAGCTTCTCGCCGATGTAAAAAGTGAGTTGGTTTCCTCTCAAAAGTCTCTTGTGTCCTCCAGAAAGAAAATTGAAGAACAAGAAGATATTCTTGAGAGGCAAATGGCAGAACTTGAAGAACAAAATAAGGGTATCAATGCATATATGTCGAGTTTAAAAGATGCTCAAATCGAAGTAGAGAGTGAAAGAGTAAAGCTTAGATTCGTAGAGGCCCATAACAAGGAGCTCGAGGGTGATTTGGTGAAGGAAAAGGAGCTCACTGATGAGCTACAGCAACAACTGAAGAGAGAGAAATCCTATCTCCAGCAGGCAACTGAGGAGAAATCACTTCTACAGAACGAGCTAGAGCATAAACGTATCGAGTTCGAGAAAACTCACAAACTCCTTCAAGACAAAGCGTCGGAGTTGGTCGAGGCCAAGTTAGAAATCCAGCATTTGAAATCCAAACAGGTTTCTCTTCAACTTCTTCTAGAGGAGAAAGACTTGGAAATACTTGATGCACAAAAGAAAATCGAGAATTTAAATCAGGAAATCATTGAGCTACAAACACTTATGAGTAGTAAAGAGGCCCAGCTTGATCAGACAAATGCTATGCTGAAAGAGAAAGATGAACGTGTTGAGATAATGCAGAACGAACTAAACGATACAAAGCTGAAAATTTCCGAAGCTGAAGCAGCAGTAGAACACATTGTGGATCTCACAAATAAATTGGTGATCTCCATCAAAGACGGCGACGAAGACGATGTTTTGAAACTGAACGAAAACCTTAGCCTCAATCTACAGCAGCAGTTATTCAAGAAACCTACCGATAACATAAGATTACAGAAGAAACAGCTCGAAACCGAGCTAGAACTCACCAAGGAAAGCTTGAGACGTAAAGAAATGGAGATTCTAGCTGCAGAAAGAGCCCTGACCGTTAAAGACGAGGAACTAAAAACGGTTCAGGAAAGATTAGATGGAAAGGAGAAAGAATTCGAGAAGATGAAGGAAGAGATGGATGAAGAAGGCAAGCATCTGAGGGAGCAATACACATTGGCACAAGACAATGTTGGAGGAGACTTGGCAATTGAAAGGCTTCAATTTGAAGCTGCTCAGTTAGAGGTCGAAGCAGCTACTAGCGCTCTTCAAAAACTCACGGACATGAGCCGAGATCTTCTGAATAAAGCTGGTCGTAGCCTCGAGGCCGATATCGGATCAAGAAGCATTCGCATTCAGCAGCACGACGACGATAACAACGGCGTGAATGGCATTGATAATAGTAACTCAAGATTCAGTGAAGTGAAGGTAGAAGTTTCCCGTCTTTCATCTCTAACTGAACAGCTCTTGAAGGAAGCTGGTATATTTGTTGATGCGGATTAG

Protein sequence

MADDDYNDLDMGYEDEPQEPEIEEGAEEELDTNTDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQRSSLRFSRNRTNFFYSTNQKRRSHPLKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQTQRLEEHVSKDPHFPQDVWLGLSLENFESDLQAALAVLKKKEEDLQDAERTILLERSQLNNAREKLEKQEEEITVAYRKQQELEDELKEANLNLASQARLIDELKLQIREKDEGIAAVESALALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLKRTVVEKEKELELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKTRKEASKKTVEMNKTVNDLNRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQNKGINAYMSSLKDAQIEVESERVKLRFVEAHNKELEGDLVKEKELTDELQQQLKREKSYLQQATEEKSLLQNELEHKRIEFEKTHKLLQDKASELVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKIENLNQEIIELQTLMSSKEAQLDQTNAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTNKLVISIKDGDEDDVLKLNENLSLNLQQQLFKKPTDNIRLQKKQLETELELTKESLRRKEMEILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDNVGGDLAIERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQHDDDNNGVNGIDNSNSRFSEVKVEVSRLSSLTEQLLKEAGIFVDAD*

Homology

[Close]

BLAST of Chy4G070920 vs. ExPASy Swiss-Prot
Match: Q9FJ98 (DNA-directed RNA polymerases II, IV and V subunit 6A OS=Arabidopsis thaliana OX=3702 GN=NRPB6A PE=1 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 2.3e-56
Identity = 116/140 (82.86%), Postives = 129/140 (92.14%), Query Frame = 0


Query: 1   MADDDYNDL-DMGYEDEPQEPEIEEGAEEELD-TNTDDVPGEPVEAEEKEDEEPVERVRK 60
           MAD+DYND+ D+GYEDEP EPEIEEG EE+++    DDV GEP+EAE+K + EPV+R RK
Sbjct: 1   MADEDYNDVDDLGYEDEPAEPEIEEGVEEDVEMKENDDVNGEPIEAEDKVETEPVQRPRK 60

Query: 61  TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 120
           TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPD
Sbjct: 61  TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPD 120

Query: 121 GSYEDWGVDELIVEDSWKRQ 139
           GS+E+WGVDELIVEDSWKRQ
Sbjct: 121 GSFEEWGVDELIVEDSWKRQ 140

[Close]

BLAST of Chy4G070920 vs. ExPASy Swiss-Prot
Match: Q9SJ96 (DNA-directed RNA polymerases II and V subunit 6B OS=Arabidopsis thaliana OX=3702 GN=NRPB6B PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 6.2e-54
Identity = 114/140 (81.43%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MADDDYNDL-DMGYEDEPQEPEIEEGAEEELD-TNTDDVPGEPVEAEEKEDEEPVERVRK 60
           MADDDYN++ D+GYEDEP EPEIEEG EE+ D    DDV  +P+E E+K + EPV+R RK
Sbjct: 1   MADDDYNEVDDLGYEDEPAEPEIEEGVEEDADIKENDDVNVDPLETEDKVETEPVQRPRK 60

Query: 61  TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 120
           TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPD
Sbjct: 61  TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPD 120

Query: 121 GSYEDWGVDELIVEDSWKRQ 139
            SYE+WGVDELIVEDSWKRQ
Sbjct: 121 MSYEEWGVDELIVEDSWKRQ 140

[Close]

BLAST of Chy4G070920 vs. ExPASy Swiss-Prot
Match: Q32PE0 (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Bos taurus OX=9913 GN=POLR2F PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.6e-28
Identity = 80/131 (61.07%), Postives = 95/131 (72.52%), Query Frame = 0


Query: 4   DDYNDLDMGYEDEPQEPEIEEGAEEELDTNTDDVP-GEPVEAEEKEDEEPVERVRKTSKF 63
           DD++D++   EDE  +    E AEEE   N + +P GE  +A +K         R T+ +
Sbjct: 11  DDFDDVE---EDEGLDD--LENAEEEGQVNVEILPSGERPQANQK---------RITTPY 70

Query: 64  MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 123
           MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP  IRRYLPDGSYE
Sbjct: 71  MTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYE 127

Query: 124 DWGVDELIVED 134
           DWGVDELI+ D
Sbjct: 131 DWGVDELIITD 127

[Close]

BLAST of Chy4G070920 vs. ExPASy Swiss-Prot
Match: P61219 (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Mus musculus OX=10090 GN=Polr2f PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.6e-28
Identity = 80/131 (61.07%), Postives = 95/131 (72.52%), Query Frame = 0


Query: 4   DDYNDLDMGYEDEPQEPEIEEGAEEELDTNTDDVP-GEPVEAEEKEDEEPVERVRKTSKF 63
           DD++D++   EDE  +    E AEEE   N + +P GE  +A +K         R T+ +
Sbjct: 11  DDFDDVE---EDEGLDD--LENAEEEGQENVEILPSGERPQANQK---------RITTPY 70

Query: 64  MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 123
           MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP  IRRYLPDGSYE
Sbjct: 71  MTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYE 127

Query: 124 DWGVDELIVED 134
           DWGVDELI+ D
Sbjct: 131 DWGVDELIISD 127

[Close]

BLAST of Chy4G070920 vs. ExPASy Swiss-Prot
Match: O88828 (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Rattus norvegicus OX=10116 GN=Polr2f PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.6e-28
Identity = 80/131 (61.07%), Postives = 95/131 (72.52%), Query Frame = 0


Query: 4   DDYNDLDMGYEDEPQEPEIEEGAEEELDTNTDDVP-GEPVEAEEKEDEEPVERVRKTSKF 63
           DD++D++   EDE  +    E AEEE   N + +P GE  +A +K         R T+ +
Sbjct: 11  DDFDDVE---EDEGLDD--LENAEEEGQENVEILPSGERPQANQK---------RITTPY 70

Query: 64  MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 123
           MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP  IRRYLPDGSYE
Sbjct: 71  MTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYE 127

Query: 124 DWGVDELIVED 134
           DWGVDELI+ D
Sbjct: 131 DWGVDELIISD 127

[Close]

BLAST of Chy4G070920 vs. ExPASy TrEMBL
Match: A0A0A0LDN9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G877610 PE=4 SV=1)

HSP 1 Score: 1295.8 bits (3352), Expect = 0.0e+00
Identity = 735/757 (97.09%), Postives = 744/757 (98.28%), Query Frame = 0


Query: 138 QRSSLRFSRNRTNFFYSTNQKRRSHPLKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQ 197
           QRSSLRF RNRTNFFYSTNQKRRSH LKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQ
Sbjct: 21  QRSSLRFGRNRTNFFYSTNQKRRSHSLKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQ 80

Query: 198 TQRLEEHVSKDPHFPQDVWLGLSLENFESDLQAALAVLKKKEEDLQDAERTILLERSQLN 257
           TQRLEEHVSKDPHFPQDVWLGLSLEN ESDLQAALAVLKKKEEDLQDAERTILLERSQLN
Sbjct: 81  TQRLEEHVSKDPHFPQDVWLGLSLENLESDLQAALAVLKKKEEDLQDAERTILLERSQLN 140

Query: 258 NAREKLEKQEEEITVAYRKQQELEDELKEANLNLASQARLIDELKLQIREKDEGIAAVES 317
           NAREKLEKQEEEITVAYRKQQELEDELKEANLNL SQ RLIDELKLQI EKDEGIAAVES
Sbjct: 141 NAREKLEKQEEEITVAYRKQQELEDELKEANLNLVSQTRLIDELKLQIMEKDEGIAAVES 200

Query: 318 ALALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLKRTVVE 377
           ALALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLK+TVVE
Sbjct: 201 ALALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLKKTVVE 260

Query: 378 KEKELELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKTRKEASKKTVEMNKTVND 437
           KEKE ELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKT+KEASKKTVEMNKTVND
Sbjct: 261 KEKEFELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKTKKEASKKTVEMNKTVND 320

Query: 438 LNRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQNKGINAYMSSLKDA 497
            NRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQ KGINAYMSSLKDA
Sbjct: 321 FNRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQKKGINAYMSSLKDA 380

Query: 498 QIEVESERVKLRFVEAHNKELEGDLVKEKELTDELQQQLKREKSYLQQATEEKSLLQNEL 557
           QIEVESERVKLRF+EAHNKELEGDLVKEKELTDELQQQL+REKS+LQQATEEKSLLQNEL
Sbjct: 381 QIEVESERVKLRFIEAHNKELEGDLVKEKELTDELQQQLEREKSFLQQATEEKSLLQNEL 440

Query: 558 EHKRIEFEKTHKLLQDKASELVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKIENLN 617
           EHKRIEFEKTHKLLQDKAS LVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKI+NLN
Sbjct: 441 EHKRIEFEKTHKLLQDKASALVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKIQNLN 500

Query: 618 QEIIELQTLMSSKEAQLDQTNAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTN 677
           QEIIELQTLMSSKEAQLDQT AMLKEKDERVE MQNELNDTKLKISEAEAAVEHIVDLTN
Sbjct: 501 QEIIELQTLMSSKEAQLDQTTAMLKEKDERVETMQNELNDTKLKISEAEAAVEHIVDLTN 560

Query: 678 KLVISIKDGDEDDVLKLNENLSLNLQQQLFKKPTDNIRLQKKQLETELELTKESLRRKEM 737
           KLVISIKDGDE DVLKLNENLSLNLQQQLFKKPTDNIRLQKKQLETELELTKESLRRKEM
Sbjct: 561 KLVISIKDGDEYDVLKLNENLSLNLQQQLFKKPTDNIRLQKKQLETELELTKESLRRKEM 620

Query: 738 EILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDNVGGDLA 797
           EILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDNVGGDLA
Sbjct: 621 EILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDNVGGDLA 680

Query: 798 IERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQHDDDNNGVN 857
           IERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQHDDDNNGVN
Sbjct: 681 IERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQHDDDNNGVN 740

Query: 858 GIDNSNSRFSEVKVEVSRLSSLTEQLLKEAGIFVDAD 895
           GIDN+NSRF+EVKVEVSRLSSLTEQLLKEAGIF+DAD
Sbjct: 741 GIDNNNSRFNEVKVEVSRLSSLTEQLLKEAGIFLDAD 777

[Close]

BLAST of Chy4G070920 vs. ExPASy TrEMBL
Match: A0A5A7T7H9 (Putative leucine-rich repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003770 PE=4 SV=1)

HSP 1 Score: 1220.7 bits (3157), Expect = 0.0e+00
Identity = 704/764 (92.15%), Postives = 729/764 (95.42%), Query Frame = 0


Query: 139 RSSLRFSRNRTNFFYSTNQKRRSHPLKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQT 198
           RSSLRFSRNR  F YSTNQKRRSHPLKVVQSVLNNCKSNLNDNGA+EEAKLLLERLYAQT
Sbjct: 18  RSSLRFSRNRIKFCYSTNQKRRSHPLKVVQSVLNNCKSNLNDNGASEEAKLLLERLYAQT 77

Query: 199 QRLEEHVSKDPHFPQDVWLGLSLENFESDLQAALAVLKKKEEDLQDAERTILLERSQLNN 258
           QRLEEHVSKDPHFP+DVWLGLSLEN ESDLQAALAVLKKKEEDLQDA+RTILLERSQLNN
Sbjct: 78  QRLEEHVSKDPHFPRDVWLGLSLENLESDLQAALAVLKKKEEDLQDAKRTILLERSQLNN 137

Query: 259 AREKLEKQEEEITVAYRKQQELEDELKEANLNLASQARLIDELKLQIREKDEGIAAVESA 318
           AREKLEKQEEEITVAYRKQQELEDELK+ANLNLASQARLIDELKLQIREKDEGIAAVESA
Sbjct: 138 AREKLEKQEEEITVAYRKQQELEDELKQANLNLASQARLIDELKLQIREKDEGIAAVESA 197

Query: 319 LALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLKRTVVEK 378
           LALKEDELKRM ADLAMKSEEA KTNCELKSKSQLLTEAN+VVKRQEVELQMLK+ VVEK
Sbjct: 198 LALKEDELKRMGADLAMKSEEALKTNCELKSKSQLLTEANKVVKRQEVELQMLKKAVVEK 257

Query: 379 EKELELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKTRKEASKKTVEMNKTVNDL 438
           EKELELSVKLQKLE+ER+EVVEKNLEKRTMEWLLAQEELKK +KEASK+TVEMNKTVND 
Sbjct: 258 EKELELSVKLQKLEMERVEVVEKNLEKRTMEWLLAQEELKKMKKEASKQTVEMNKTVNDF 317

Query: 439 NRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQNKGINAYMSSLKDAQ 498
           NRVKKLLADVKSELVSSQKSLVSSRKKIEEQED L+RQMAELEEQ KGIN YMSSLKDAQ
Sbjct: 318 NRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDFLKRQMAELEEQKKGINTYMSSLKDAQ 377

Query: 499 IEVESERVKLRFVEAHNKELEGDLVKEKELTDELQQQLKREKSYLQQATEEKSLLQNELE 558
           IEVESERVKLRFVEAHNKELE DL+KEKELTDELQQQLKREKSYLQQATEEKSLLQNELE
Sbjct: 378 IEVESERVKLRFVEAHNKELERDLLKEKELTDELQQQLKREKSYLQQATEEKSLLQNELE 437

Query: 559 HKRIEFEKTHKLLQDKASELVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKIENLNQ 618
           HK IEFEKTHKLLQDKASELVEAKLEIQHLKS+QVSLQLLLEEKDLEILDAQKKIENLNQ
Sbjct: 438 HKHIEFEKTHKLLQDKASELVEAKLEIQHLKSQQVSLQLLLEEKDLEILDAQKKIENLNQ 497

Query: 619 EIIELQTLMSSKEAQLDQTNAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTNK 678
           EIIELQTLMSSKEAQLDQT AMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTNK
Sbjct: 498 EIIELQTLMSSKEAQLDQTTAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTNK 557

Query: 679 LVISIKDGDEDD-VLKLNENLSLNLQQQLFKKPTDNIRLQKKQLETELELTKESLRRKEM 738
           LVISIKDGD+D+ VLKLNENLSLNLQQQLFKKPTDN+RLQKKQLETELELTKESLRRKEM
Sbjct: 558 LVISIKDGDDDNSVLKLNENLSLNLQQQLFKKPTDNLRLQKKQLETELELTKESLRRKEM 617

Query: 739 EILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDN------ 798
           EILAAER+LTVKDEELKTVQERL+ KEKEFEKMKEEMDEE KH    +TL QDN      
Sbjct: 618 EILAAERSLTVKDEELKTVQERLEAKEKEFEKMKEEMDEETKH----HTLPQDNAGGEDN 677

Query: 799 -VGGDLAIERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQHD 858
            +GGDL IERLQFEAAQLE+EAATSALQKLTDMSRDLLNKAGRSLEADI SRSI IQQHD
Sbjct: 678 KIGGDLEIERLQFEAAQLEIEAATSALQKLTDMSRDLLNKAGRSLEADIESRSIHIQQHD 737

Query: 859 DDNNGVNGIDNSNSRFSEVKVEVSRLSSLTEQLLKEAGIFVDAD 895
           D N+GV+ IDN+NSRF+EVKVEVSRLSSLTEQLLKEAGIFVDAD
Sbjct: 738 DYNDGVDDIDNNNSRFNEVKVEVSRLSSLTEQLLKEAGIFVDAD 777

[Close]

BLAST of Chy4G070920 vs. ExPASy TrEMBL
Match: A0A1S3CSI3 (putative leucine-rich repeat-containing protein DDB_G0290503 OS=Cucumis melo OX=3656 GN=LOC103503836 PE=4 SV=1)

HSP 1 Score: 1217.2 bits (3148), Expect = 0.0e+00
Identity = 704/765 (92.03%), Postives = 728/765 (95.16%), Query Frame = 0


Query: 138 QRSSLRFSRNRTNFFYSTNQKRRSHPLKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQ 197
           QRSSLRFSRNR  F YSTNQKRRSHPLKVVQSVLNN KSNLNDNGA+EEAKLLLERLYAQ
Sbjct: 22  QRSSLRFSRNRIKFCYSTNQKRRSHPLKVVQSVLNNFKSNLNDNGASEEAKLLLERLYAQ 81

Query: 198 TQRLEEHVSKDPHFPQDVWLGLSLENFESDLQAALAVLKKKEEDLQDAERTILLERSQLN 257
           TQRLEEHVSKDPHFP+DVWLGLSLEN ESDLQAALAVLKKKEEDLQDAERTILLERSQLN
Sbjct: 82  TQRLEEHVSKDPHFPRDVWLGLSLENLESDLQAALAVLKKKEEDLQDAERTILLERSQLN 141

Query: 258 NAREKLEKQEEEITVAYRKQQELEDELKEANLNLASQARLIDELKLQIREKDEGIAAVES 317
           NAREKLEKQEEEITVAYRKQQELEDELK+ANLNLASQARLIDELKLQIREKDEGIAAVES
Sbjct: 142 NAREKLEKQEEEITVAYRKQQELEDELKQANLNLASQARLIDELKLQIREKDEGIAAVES 201

Query: 318 ALALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLKRTVVE 377
           ALALKEDELKRM ADLAMKSEEA KTNCELKSKSQLLTEAN+VVKRQEVELQMLK+ VVE
Sbjct: 202 ALALKEDELKRMGADLAMKSEEALKTNCELKSKSQLLTEANKVVKRQEVELQMLKKAVVE 261

Query: 378 KEKELELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKTRKEASKKTVEMNKTVND 437
           KEKELELSVKLQKLE+ER+EVVEKNLEKRTMEWLLAQEELKK +KEASK+TVEMNKTVND
Sbjct: 262 KEKELELSVKLQKLEMERVEVVEKNLEKRTMEWLLAQEELKKMKKEASKQTVEMNKTVND 321

Query: 438 LNRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQNKGINAYMSSLKDA 497
            NRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDIL+RQMAELEEQ KGIN YMSSLKDA
Sbjct: 322 FNRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILKRQMAELEEQKKGINTYMSSLKDA 381

Query: 498 QIEVESERVKLRFVEAHNKELEGDLVKEKELTDELQQQLKREKSYLQQATEEKSLLQNEL 557
           QIEVESERVKLRFVEAHNKELE DL+KEKELTDELQQQLKREKS LQQATEEKSLLQNEL
Sbjct: 382 QIEVESERVKLRFVEAHNKELERDLLKEKELTDELQQQLKREKSDLQQATEEKSLLQNEL 441

Query: 558 EHKRIEFEKTHKLLQDKASELVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKIENLN 617
           EHK IEFEKTHKLLQDKASELVEAKLEIQHLKS+QVSLQLLLEEKDLEILDAQKKIENLN
Sbjct: 442 EHKHIEFEKTHKLLQDKASELVEAKLEIQHLKSQQVSLQLLLEEKDLEILDAQKKIENLN 501

Query: 618 QEIIELQTLMSSKEAQLDQTNAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTN 677
           QEIIELQTLMSSKEAQLDQT AMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTN
Sbjct: 502 QEIIELQTLMSSKEAQLDQTTAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTN 561

Query: 678 KLVISIKDGDEDD-VLKLNENLSLNLQQQLFKKPTDNIRLQKKQLETELELTKESLRRKE 737
           KLVISIKDGD+DD VLKLNENLSLNLQQQLFKKPTDN+RLQKKQLETELELTKESLR KE
Sbjct: 562 KLVISIKDGDDDDSVLKLNENLSLNLQQQLFKKPTDNLRLQKKQLETELELTKESLRHKE 621

Query: 738 MEILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDN----- 797
           MEILAAER+LTVKDEELKTVQERL+ KEKEFEKMKEEMDEE KH    +TL QDN     
Sbjct: 622 MEILAAERSLTVKDEELKTVQERLEAKEKEFEKMKEEMDEETKH----HTLPQDNAGGED 681

Query: 798 --VGGDLAIERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQH 857
             +GGDL IERLQFEAAQLE+EAATSALQKLTDMSRDLLNKAGRSLEADI SRSI IQQH
Sbjct: 682 NKIGGDLEIERLQFEAAQLEIEAATSALQKLTDMSRDLLNKAGRSLEADIESRSIHIQQH 741

Query: 858 DDDNNGVNGIDNSNSRFSEVKVEVSRLSSLTEQLLKEAGIFVDAD 895
           DD N+G++ IDN+NSRF+EVKVEVSRLSSLTEQLLKEAGIFVDAD
Sbjct: 742 DDYNDGIDDIDNNNSRFNEVKVEVSRLSSLTEQLLKEAGIFVDAD 782

[Close]

BLAST of Chy4G070920 vs. ExPASy TrEMBL
Match: A0A6J1IMM0 (myosin-11 OS=Cucurbita maxima OX=3661 GN=LOC111476606 PE=4 SV=1)

HSP 1 Score: 1046.6 bits (2705), Expect = 6.0e-302
Identity = 623/764 (81.54%), Postives = 673/764 (88.09%), Query Frame = 0


Query: 138 QRSSLRFSRNRTNFFYSTNQKRRSHPLKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQ 197
           +RSSLR +RN+T F  ST ++RRSH LKVVQSVLN  KSNLNDNGA+EEAKLLLERLYAQ
Sbjct: 21  KRSSLRLTRNQTKFTSSTTRERRSHSLKVVQSVLNTSKSNLNDNGASEEAKLLLERLYAQ 80

Query: 198 TQRLEEHVSKDPHFPQDVWLGLSLENFESDLQAALAVLKKKEEDLQDAERTILLERSQLN 257
           TQRLEEHVSKD H PQDVWLGLSLEN ES LQAALAVLKKKEEDLQDAERTIL ERSQLN
Sbjct: 81  TQRLEEHVSKDSHSPQDVWLGLSLENLESGLQAALAVLKKKEEDLQDAERTILSERSQLN 140

Query: 258 NAREKLEKQEEEITVAYRKQQELEDELKEANLNLASQARLIDELKLQIREKDEGIAAVES 317
           NAREKLEKQEEEIT AY KQQELEDELK+ANLNLASQAR IDELKLQIREKDE IAAVES
Sbjct: 141 NAREKLEKQEEEITAAYHKQQELEDELKQANLNLASQARQIDELKLQIREKDERIAAVES 200

Query: 318 ALALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLKRTVVE 377
            L LKEDELK+MRADLA KSEEA KT+ ELKSKS+LL EANEVVKRQE EL+MLK+ V+E
Sbjct: 201 TLTLKEDELKKMRADLAKKSEEAIKTDSELKSKSKLLNEANEVVKRQEFELEMLKKAVLE 260

Query: 378 KEKELELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKTRKEASKKTVEMNKTVND 437
           KE+ELE SVKLQKLE E+L+VVEKNLEKRT EWLL QEELKK RKEASKK V MNKTVND
Sbjct: 261 KEQELEASVKLQKLEEEKLKVVEKNLEKRTTEWLLVQEELKKLRKEASKKAVGMNKTVND 320

Query: 438 LNRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQNKGINAYMSSLKDA 497
            NRVKKLLAD KSELVSSQKSLVS+RKKIEEQEDIL +QM ELEEQ KGINAYMSSL+DA
Sbjct: 321 FNRVKKLLADAKSELVSSQKSLVSARKKIEEQEDILGKQMTELEEQKKGINAYMSSLEDA 380

Query: 498 QIEVESERVKLRFVEAHNKELEGDLVKEKELTDELQQQLKREKSYLQQATEEKSLLQNEL 557
           QIE+ESERVKLR  EA NKELE  L  EKELTDEL+QQLK+EKS LQQ TEEKSLLQ EL
Sbjct: 381 QIEIESERVKLRVAEAQNKELERVLFMEKELTDELRQQLKKEKSNLQQVTEEKSLLQKEL 440

Query: 558 EHKRIEFEKTHKLLQDKASELVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKIENLN 617
           +HK IEFEKTH LLQDK+SELVEA LEIQ LKS+QVSLQLLLEEKDLEI DAQKKIE LN
Sbjct: 441 KHKHIEFEKTHNLLQDKSSELVEANLEIQRLKSQQVSLQLLLEEKDLEIHDAQKKIEILN 500

Query: 618 QEIIELQTLMSSKEAQLDQTNAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTN 677
           QEIIELQT+MSSKEAQL QT  MLKEKDE V+IMQNELNDTKLKISEAEA V HIVDLTN
Sbjct: 501 QEIIELQTIMSSKEAQLSQTTVMLKEKDECVQIMQNELNDTKLKISEAEAVVGHIVDLTN 560

Query: 678 KLVISIKDGDEDDVLKLNENLSLNLQQQLFKKPT-DNIRLQKKQLETELELTKESLRRKE 737
           KLVISI DGD +DV +LN++LS+NLQQQ FK+PT DN+ LQKKQ+ETELELTKESLR+KE
Sbjct: 561 KLVISINDGD-NDVSELNDDLSINLQQQFFKQPTDDNMGLQKKQIETELELTKESLRQKE 620

Query: 738 MEILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDNVG-GD 797
           MEI AAERALTVKDEELKTV+ERLD KEKEFE M+EEM EE   LR+ Y LA+D+VG GD
Sbjct: 621 MEIQAAERALTVKDEELKTVRERLDTKEKEFENMREEMGEEANDLRKLYALAEDSVGVGD 680

Query: 798 LAIERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQHDDDNNG 857
           LAIERLQ EAAQLEVEAATSALQKLTD+SR+LLNKA  SLE DI +RSI  Q HDDDN+ 
Sbjct: 681 LAIERLQIEAAQLEVEAATSALQKLTDISRELLNKASHSLEGDIDTRSIHFQLHDDDNDV 740

Query: 858 VN-----GIDNSNSRFSEVKVEVSRLSSLTEQLLKEAGIFVDAD 895
            +     GIDN++ RF+EVK+EVSRLSSLTEQLLKEAGIFVDAD
Sbjct: 741 DDTRIGGGIDNNSQRFNEVKLEVSRLSSLTEQLLKEAGIFVDAD 783

[Close]

BLAST of Chy4G070920 vs. ExPASy TrEMBL
Match: A0A6J1FCM9 (myosin-11-like OS=Cucurbita moschata OX=3662 GN=LOC111442800 PE=4 SV=1)

HSP 1 Score: 1043.5 bits (2697), Expect = 5.1e-301
Identity = 622/765 (81.31%), Postives = 672/765 (87.84%), Query Frame = 0


Query: 138 QRSSLRFSRNRTNFFYSTNQKRRSHPLKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQ 197
           +RSSLR +RN+T F  ST ++RRSH LKVVQSVLN  KSNLNDNGA+EEAKLLLERLYAQ
Sbjct: 21  KRSSLRLTRNQTKFTSSTTRERRSHSLKVVQSVLNTSKSNLNDNGASEEAKLLLERLYAQ 80

Query: 198 TQRLEEHVSKDPHFPQDVWLGLSLENFESDLQAALAVLKKKEEDLQDAERTILLERSQLN 257
           TQRLEEHVSKD H PQDVWLGLSLEN ES LQAAL VLKKKEEDLQDAERTIL ERSQLN
Sbjct: 81  TQRLEEHVSKDSHSPQDVWLGLSLENLESGLQAALTVLKKKEEDLQDAERTILSERSQLN 140

Query: 258 NAREKLEKQEEEITVAYRKQQELEDELKEANLNLASQARLIDELKLQIREKDEGIAAVES 317
           NAREKLEKQEEEIT AY KQQELEDELK+ANLNLASQAR IDELKLQIREKDE IAAVES
Sbjct: 141 NAREKLEKQEEEITAAYHKQQELEDELKQANLNLASQARQIDELKLQIREKDERIAAVES 200

Query: 318 ALALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLKRTVVE 377
            L LKEDEL +MRADLA KSEEA KT+ ELKSKS+LL EANEVVKRQE ELQMLK  V+E
Sbjct: 201 TLTLKEDELTKMRADLAKKSEEAIKTDSELKSKSKLLNEANEVVKRQEFELQMLKNAVLE 260

Query: 378 KEKELELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKTRKEASKKTVEMNKTVND 437
           KE+ELE+SVKLQKLE E+LEVVEKNLEKRT EWLL QE+LKK RKE+SKK VEMNKTVND
Sbjct: 261 KEQELEVSVKLQKLEEEKLEVVEKNLEKRTTEWLLVQEDLKKLRKESSKKAVEMNKTVND 320

Query: 438 LNRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQNKGINAYMSSLKDA 497
            NRVKKLLAD KSELVSSQKSLVS+RKKIEEQEDIL +QM ELEEQ KGINAYMSSL+DA
Sbjct: 321 FNRVKKLLADAKSELVSSQKSLVSARKKIEEQEDILGKQMTELEEQKKGINAYMSSLEDA 380

Query: 498 QIEVESERVKLRFVEAHNKELEGDLVKEKELTDELQQQLKREKSYLQQATEEKSLLQNEL 557
           QIE+ESERVKLR  +A NKELE  L  EKELTDELQQQLK+EKS LQQ TEEKS+LQ EL
Sbjct: 381 QIEIESERVKLRVAQAQNKELERVLFMEKELTDELQQQLKKEKSNLQQVTEEKSILQKEL 440

Query: 558 EHKRIEFEKTHKLLQDKASELVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKIENLN 617
           EHK IEFEKTH LLQ KASELVEA LEIQ LKS+QVSLQLLLEEKDLEI DAQKKIE LN
Sbjct: 441 EHKHIEFEKTHNLLQGKASELVEANLEIQRLKSQQVSLQLLLEEKDLEIHDAQKKIEILN 500

Query: 618 QEIIELQTLMSSKEAQLDQTNAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTN 677
           +EIIELQTLMSSKEAQL QT  MLKEKDE V+IMQNELNDTKLKISEAEA V HIVDLTN
Sbjct: 501 EEIIELQTLMSSKEAQLSQTTVMLKEKDECVQIMQNELNDTKLKISEAEAVVGHIVDLTN 560

Query: 678 KLVISIKDGDEDDVLKLNENLSLNLQQQLFKKPT-DNIRLQKKQLETELELTKESLRRKE 737
           KLV+SI DGD DD  +LN++LS+NLQQQ FK+PT DN+ LQKKQLETELELTKESLR+KE
Sbjct: 561 KLVMSINDGD-DDASELNDDLSINLQQQFFKQPTDDNMGLQKKQLETELELTKESLRQKE 620

Query: 738 MEILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDNVG-GD 797
           MEI AAERALTVKDEELKTV+ERLD KEK+ E MKEEMDEE K LR+ Y LA+D+VG GD
Sbjct: 621 MEIQAAERALTVKDEELKTVRERLDTKEKDLENMKEEMDEEAKDLRKLYALAEDSVGVGD 680

Query: 798 LAIERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQHDDD-NN 857
           LAIE+LQ EAAQLEVEAATSALQKLTD+SR+LLNKA  SL+ DI +RSI  Q HDDD +N
Sbjct: 681 LAIEKLQIEAAQLEVEAATSALQKLTDISRELLNKASHSLKGDIDTRSIHFQLHDDDSDN 740

Query: 858 GVN-----GIDNSNSRFSEVKVEVSRLSSLTEQLLKEAGIFVDAD 895
            V+     GIDN++ RF+EVK+EVSRLSSLTEQLLKEAGIFVDAD
Sbjct: 741 DVDTRIGGGIDNNSQRFNEVKLEVSRLSSLTEQLLKEAGIFVDAD 784

[Close]

BLAST of Chy4G070920 vs. NCBI nr
Match: XP_004136356.1 (putative leucine-rich repeat-containing protein DDB_G0290503 [Cucumis sativus] >KGN60090.1 hypothetical protein Csa_002237 [Cucumis sativus])

HSP 1 Score: 1295 bits (3350), Expect = 0.0
Identity = 735/757 (97.09%), Postives = 744/757 (98.28%), Query Frame = 0


Query: 138 QRSSLRFSRNRTNFFYSTNQKRRSHPLKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQ 197
           QRSSLRF RNRTNFFYSTNQKRRSH LKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQ
Sbjct: 21  QRSSLRFGRNRTNFFYSTNQKRRSHSLKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQ 80

Query: 198 TQRLEEHVSKDPHFPQDVWLGLSLENFESDLQAALAVLKKKEEDLQDAERTILLERSQLN 257
           TQRLEEHVSKDPHFPQDVWLGLSLEN ESDLQAALAVLKKKEEDLQDAERTILLERSQLN
Sbjct: 81  TQRLEEHVSKDPHFPQDVWLGLSLENLESDLQAALAVLKKKEEDLQDAERTILLERSQLN 140

Query: 258 NAREKLEKQEEEITVAYRKQQELEDELKEANLNLASQARLIDELKLQIREKDEGIAAVES 317
           NAREKLEKQEEEITVAYRKQQELEDELKEANLNL SQ RLIDELKLQI EKDEGIAAVES
Sbjct: 141 NAREKLEKQEEEITVAYRKQQELEDELKEANLNLVSQTRLIDELKLQIMEKDEGIAAVES 200

Query: 318 ALALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLKRTVVE 377
           ALALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLK+TVVE
Sbjct: 201 ALALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLKKTVVE 260

Query: 378 KEKELELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKTRKEASKKTVEMNKTVND 437
           KEKE ELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKT+KEASKKTVEMNKTVND
Sbjct: 261 KEKEFELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKTKKEASKKTVEMNKTVND 320

Query: 438 LNRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQNKGINAYMSSLKDA 497
            NRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQ KGINAYMSSLKDA
Sbjct: 321 FNRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQKKGINAYMSSLKDA 380

Query: 498 QIEVESERVKLRFVEAHNKELEGDLVKEKELTDELQQQLKREKSYLQQATEEKSLLQNEL 557
           QIEVESERVKLRF+EAHNKELEGDLVKEKELTDELQQQL+REKS+LQQATEEKSLLQNEL
Sbjct: 381 QIEVESERVKLRFIEAHNKELEGDLVKEKELTDELQQQLEREKSFLQQATEEKSLLQNEL 440

Query: 558 EHKRIEFEKTHKLLQDKASELVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKIENLN 617
           EHKRIEFEKTHKLLQDKAS LVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKI+NLN
Sbjct: 441 EHKRIEFEKTHKLLQDKASALVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKIQNLN 500

Query: 618 QEIIELQTLMSSKEAQLDQTNAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTN 677
           QEIIELQTLMSSKEAQLDQT AMLKEKDERVE MQNELNDTKLKISEAEAAVEHIVDLTN
Sbjct: 501 QEIIELQTLMSSKEAQLDQTTAMLKEKDERVETMQNELNDTKLKISEAEAAVEHIVDLTN 560

Query: 678 KLVISIKDGDEDDVLKLNENLSLNLQQQLFKKPTDNIRLQKKQLETELELTKESLRRKEM 737
           KLVISIKDGDE DVLKLNENLSLNLQQQLFKKPTDNIRLQKKQLETELELTKESLRRKEM
Sbjct: 561 KLVISIKDGDEYDVLKLNENLSLNLQQQLFKKPTDNIRLQKKQLETELELTKESLRRKEM 620

Query: 738 EILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDNVGGDLA 797
           EILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDNVGGDLA
Sbjct: 621 EILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDNVGGDLA 680

Query: 798 IERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQHDDDNNGVN 857
           IERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQHDDDNNGVN
Sbjct: 681 IERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQHDDDNNGVN 740

Query: 858 GIDNSNSRFSEVKVEVSRLSSLTEQLLKEAGIFVDAD 894
           GIDN+NSRF+EVKVEVSRLSSLTEQLLKEAGIF+DAD
Sbjct: 741 GIDNNNSRFNEVKVEVSRLSSLTEQLLKEAGIFLDAD 777

[Close]

BLAST of Chy4G070920 vs. NCBI nr
Match: KAA0038818.1 (putative leucine-rich repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1219 bits (3154), Expect = 0.0
Identity = 704/764 (92.15%), Postives = 729/764 (95.42%), Query Frame = 0


Query: 139 RSSLRFSRNRTNFFYSTNQKRRSHPLKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQT 198
           RSSLRFSRNR  F YSTNQKRRSHPLKVVQSVLNNCKSNLNDNGA+EEAKLLLERLYAQT
Sbjct: 18  RSSLRFSRNRIKFCYSTNQKRRSHPLKVVQSVLNNCKSNLNDNGASEEAKLLLERLYAQT 77

Query: 199 QRLEEHVSKDPHFPQDVWLGLSLENFESDLQAALAVLKKKEEDLQDAERTILLERSQLNN 258
           QRLEEHVSKDPHFP+DVWLGLSLEN ESDLQAALAVLKKKEEDLQDA+RTILLERSQLNN
Sbjct: 78  QRLEEHVSKDPHFPRDVWLGLSLENLESDLQAALAVLKKKEEDLQDAKRTILLERSQLNN 137

Query: 259 AREKLEKQEEEITVAYRKQQELEDELKEANLNLASQARLIDELKLQIREKDEGIAAVESA 318
           AREKLEKQEEEITVAYRKQQELEDELK+ANLNLASQARLIDELKLQIREKDEGIAAVESA
Sbjct: 138 AREKLEKQEEEITVAYRKQQELEDELKQANLNLASQARLIDELKLQIREKDEGIAAVESA 197

Query: 319 LALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLKRTVVEK 378
           LALKEDELKRM ADLAMKSEEA KTNCELKSKSQLLTEAN+VVKRQEVELQMLK+ VVEK
Sbjct: 198 LALKEDELKRMGADLAMKSEEALKTNCELKSKSQLLTEANKVVKRQEVELQMLKKAVVEK 257

Query: 379 EKELELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKTRKEASKKTVEMNKTVNDL 438
           EKELELSVKLQKLE+ER+EVVEKNLEKRTMEWLLAQEELKK +KEASK+TVEMNKTVND 
Sbjct: 258 EKELELSVKLQKLEMERVEVVEKNLEKRTMEWLLAQEELKKMKKEASKQTVEMNKTVNDF 317

Query: 439 NRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQNKGINAYMSSLKDAQ 498
           NRVKKLLADVKSELVSSQKSLVSSRKKIEEQED L+RQMAELEEQ KGIN YMSSLKDAQ
Sbjct: 318 NRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDFLKRQMAELEEQKKGINTYMSSLKDAQ 377

Query: 499 IEVESERVKLRFVEAHNKELEGDLVKEKELTDELQQQLKREKSYLQQATEEKSLLQNELE 558
           IEVESERVKLRFVEAHNKELE DL+KEKELTDELQQQLKREKSYLQQATEEKSLLQNELE
Sbjct: 378 IEVESERVKLRFVEAHNKELERDLLKEKELTDELQQQLKREKSYLQQATEEKSLLQNELE 437

Query: 559 HKRIEFEKTHKLLQDKASELVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKIENLNQ 618
           HK IEFEKTHKLLQDKASELVEAKLEIQHLKS+QVSLQLLLEEKDLEILDAQKKIENLNQ
Sbjct: 438 HKHIEFEKTHKLLQDKASELVEAKLEIQHLKSQQVSLQLLLEEKDLEILDAQKKIENLNQ 497

Query: 619 EIIELQTLMSSKEAQLDQTNAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTNK 678
           EIIELQTLMSSKEAQLDQT AMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTNK
Sbjct: 498 EIIELQTLMSSKEAQLDQTTAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTNK 557

Query: 679 LVISIKDGDEDD-VLKLNENLSLNLQQQLFKKPTDNIRLQKKQLETELELTKESLRRKEM 738
           LVISIKDGD+D+ VLKLNENLSLNLQQQLFKKPTDN+RLQKKQLETELELTKESLRRKEM
Sbjct: 558 LVISIKDGDDDNSVLKLNENLSLNLQQQLFKKPTDNLRLQKKQLETELELTKESLRRKEM 617

Query: 739 EILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDN------ 798
           EILAAER+LTVKDEELKTVQERL+ KEKEFEKMKEEMDEE KH    +TL QDN      
Sbjct: 618 EILAAERSLTVKDEELKTVQERLEAKEKEFEKMKEEMDEETKH----HTLPQDNAGGEDN 677

Query: 799 -VGGDLAIERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQHD 858
            +GGDL IERLQFEAAQLE+EAATSALQKLTDMSRDLLNKAGRSLEADI SRSI IQQHD
Sbjct: 678 KIGGDLEIERLQFEAAQLEIEAATSALQKLTDMSRDLLNKAGRSLEADIESRSIHIQQHD 737

Query: 859 DDNNGVNGIDNSNSRFSEVKVEVSRLSSLTEQLLKEAGIFVDAD 894
           D N+GV+ IDN+NSRF+EVKVEVSRLSSLTEQLLKEAGIFVDAD
Sbjct: 738 DYNDGVDDIDNNNSRFNEVKVEVSRLSSLTEQLLKEAGIFVDAD 777

[Close]

BLAST of Chy4G070920 vs. NCBI nr
Match: XP_008466422.1 (PREDICTED: putative leucine-rich repeat-containing protein DDB_G0290503 [Cucumis melo])

HSP 1 Score: 1216 bits (3145), Expect = 0.0
Identity = 704/765 (92.03%), Postives = 728/765 (95.16%), Query Frame = 0


Query: 138 QRSSLRFSRNRTNFFYSTNQKRRSHPLKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQ 197
           QRSSLRFSRNR  F YSTNQKRRSHPLKVVQSVLNN KSNLNDNGA+EEAKLLLERLYAQ
Sbjct: 22  QRSSLRFSRNRIKFCYSTNQKRRSHPLKVVQSVLNNFKSNLNDNGASEEAKLLLERLYAQ 81

Query: 198 TQRLEEHVSKDPHFPQDVWLGLSLENFESDLQAALAVLKKKEEDLQDAERTILLERSQLN 257
           TQRLEEHVSKDPHFP+DVWLGLSLEN ESDLQAALAVLKKKEEDLQDAERTILLERSQLN
Sbjct: 82  TQRLEEHVSKDPHFPRDVWLGLSLENLESDLQAALAVLKKKEEDLQDAERTILLERSQLN 141

Query: 258 NAREKLEKQEEEITVAYRKQQELEDELKEANLNLASQARLIDELKLQIREKDEGIAAVES 317
           NAREKLEKQEEEITVAYRKQQELEDELK+ANLNLASQARLIDELKLQIREKDEGIAAVES
Sbjct: 142 NAREKLEKQEEEITVAYRKQQELEDELKQANLNLASQARLIDELKLQIREKDEGIAAVES 201

Query: 318 ALALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLKRTVVE 377
           ALALKEDELKRM ADLAMKSEEA KTNCELKSKSQLLTEAN+VVKRQEVELQMLK+ VVE
Sbjct: 202 ALALKEDELKRMGADLAMKSEEALKTNCELKSKSQLLTEANKVVKRQEVELQMLKKAVVE 261

Query: 378 KEKELELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKTRKEASKKTVEMNKTVND 437
           KEKELELSVKLQKLE+ER+EVVEKNLEKRTMEWLLAQEELKK +KEASK+TVEMNKTVND
Sbjct: 262 KEKELELSVKLQKLEMERVEVVEKNLEKRTMEWLLAQEELKKMKKEASKQTVEMNKTVND 321

Query: 438 LNRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQNKGINAYMSSLKDA 497
            NRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDIL+RQMAELEEQ KGIN YMSSLKDA
Sbjct: 322 FNRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILKRQMAELEEQKKGINTYMSSLKDA 381

Query: 498 QIEVESERVKLRFVEAHNKELEGDLVKEKELTDELQQQLKREKSYLQQATEEKSLLQNEL 557
           QIEVESERVKLRFVEAHNKELE DL+KEKELTDELQQQLKREKS LQQATEEKSLLQNEL
Sbjct: 382 QIEVESERVKLRFVEAHNKELERDLLKEKELTDELQQQLKREKSDLQQATEEKSLLQNEL 441

Query: 558 EHKRIEFEKTHKLLQDKASELVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKIENLN 617
           EHK IEFEKTHKLLQDKASELVEAKLEIQHLKS+QVSLQLLLEEKDLEILDAQKKIENLN
Sbjct: 442 EHKHIEFEKTHKLLQDKASELVEAKLEIQHLKSQQVSLQLLLEEKDLEILDAQKKIENLN 501

Query: 618 QEIIELQTLMSSKEAQLDQTNAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTN 677
           QEIIELQTLMSSKEAQLDQT AMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTN
Sbjct: 502 QEIIELQTLMSSKEAQLDQTTAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTN 561

Query: 678 KLVISIKDGDEDD-VLKLNENLSLNLQQQLFKKPTDNIRLQKKQLETELELTKESLRRKE 737
           KLVISIKDGD+DD VLKLNENLSLNLQQQLFKKPTDN+RLQKKQLETELELTKESLR KE
Sbjct: 562 KLVISIKDGDDDDSVLKLNENLSLNLQQQLFKKPTDNLRLQKKQLETELELTKESLRHKE 621

Query: 738 MEILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDN----- 797
           MEILAAER+LTVKDEELKTVQERL+ KEKEFEKMKEEMDEE KH    +TL QDN     
Sbjct: 622 MEILAAERSLTVKDEELKTVQERLEAKEKEFEKMKEEMDEETKH----HTLPQDNAGGED 681

Query: 798 --VGGDLAIERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQH 857
             +GGDL IERLQFEAAQLE+EAATSALQKLTDMSRDLLNKAGRSLEADI SRSI IQQH
Sbjct: 682 NKIGGDLEIERLQFEAAQLEIEAATSALQKLTDMSRDLLNKAGRSLEADIESRSIHIQQH 741

Query: 858 DDDNNGVNGIDNSNSRFSEVKVEVSRLSSLTEQLLKEAGIFVDAD 894
           DD N+G++ IDN+NSRF+EVKVEVSRLSSLTEQLLKEAGIFVDAD
Sbjct: 742 DDYNDGIDDIDNNNSRFNEVKVEVSRLSSLTEQLLKEAGIFVDAD 782

[Close]

BLAST of Chy4G070920 vs. NCBI nr
Match: XP_038898436.1 (myosin-11 [Benincasa hispida])

HSP 1 Score: 1137 bits (2940), Expect = 0.0
Identity = 667/770 (86.62%), Postives = 699/770 (90.78%), Query Frame = 0


Query: 136 KRQRSSLRFSRNRTNFFYSTNQKRRSHPLKVVQSVLNNCKSNLNDNGANEEAKLLLERLY 195
           + +R SLR SRNRT F  ST QKRRSH LKVVQSVLNNCKSNLNDNGA+EEAKLLLERLY
Sbjct: 19  RSKRLSLRLSRNRTKFITSTTQKRRSHSLKVVQSVLNNCKSNLNDNGASEEAKLLLERLY 78

Query: 196 AQTQRLEEHVSKDPHFPQDVWLGLSLENFESDLQAALAVLKKKEEDLQDAERTILLERSQ 255
           AQTQRLEEHV+KDPH PQDVWLGLSLEN ESDLQAALAVLKKKEEDLQDAERTILLERSQ
Sbjct: 79  AQTQRLEEHVNKDPHSPQDVWLGLSLENLESDLQAALAVLKKKEEDLQDAERTILLERSQ 138

Query: 256 LNNAREKLEKQEEEITVAYRKQQELEDELKEANLNLASQARLIDELKLQIREKDEGIAAV 315
           LNNAREKLEKQEEE+T AY KQQ+LEDELK+ANL+LASQAR IDELKLQIREKD GIAAV
Sbjct: 139 LNNAREKLEKQEEELTAAYHKQQKLEDELKQANLDLASQARQIDELKLQIREKDGGIAAV 198

Query: 316 ESALALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLKRTV 375
           ESAL LKEDELKRMR DLA KSEEA KT+ ELKSKSQLLTEA EVVKRQEVELQMLK+ V
Sbjct: 199 ESALTLKEDELKRMRDDLAKKSEEAVKTDFELKSKSQLLTEAIEVVKRQEVELQMLKKAV 258

Query: 376 VEKEKELELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKTRKEASKKTVEMNKTV 435
           +EKEKELELSVKLQKLE ERLEVVEKNLE RTMEWLLAQEELKK RKE SKK VEMNKTV
Sbjct: 259 LEKEKELELSVKLQKLEEERLEVVEKNLENRTMEWLLAQEELKKMRKEGSKKAVEMNKTV 318

Query: 436 NDLNRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQNKGINAYMSSLK 495
           ND NRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDIL RQMAELEEQ KGINAYMSSLK
Sbjct: 319 NDFNRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILGRQMAELEEQKKGINAYMSSLK 378

Query: 496 DAQIEVESERVKLRFVEAHNKELEGDLVKEKELTDELQQQLKREKSYLQQATEEKSLLQN 555
           DAQIEVESERVKLR  EAHNKELE DL+ EKELTDELQQQLK+EKSYLQQ TEEKSLLQ 
Sbjct: 379 DAQIEVESERVKLRVAEAHNKELECDLLMEKELTDELQQQLKKEKSYLQQETEEKSLLQK 438

Query: 556 ELEHKRIEFEKTHKLLQDKASELVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKIEN 615
           ELEHK IEFEKTH LLQDKASELVEAKLEIQHLKS+QVSLQLLLEEKDLEILDAQKKIE 
Sbjct: 439 ELEHKHIEFEKTHTLLQDKASELVEAKLEIQHLKSEQVSLQLLLEEKDLEILDAQKKIEE 498

Query: 616 LNQEIIELQTLMSSKEAQLDQTNAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDL 675
           LNQEIIELQTLMS KEAQL+QT AMLKEKDE V+IMQNELNDTKLKISEAEAAVEHIVDL
Sbjct: 499 LNQEIIELQTLMSIKEAQLNQTTAMLKEKDECVQIMQNELNDTKLKISEAEAAVEHIVDL 558

Query: 676 TNKLVISIKDGDEDDVLKLNENLSLNLQQQLFKKPTDNIRLQKKQLETELELTKESLRRK 735
           TNKLVISIK GD++DVL LN +LSLNLQQQLF KPTDN++LQKKQLETELELTKESLR+K
Sbjct: 559 TNKLVISIKGGDDNDVLNLNNDLSLNLQQQLFMKPTDNMKLQKKQLETELELTKESLRQK 618

Query: 736 EMEILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDNVGG- 795
           EMEILAAERALTVKDEELKTVQERLD KEKEFEKMKEEMDEE K  R+ YTLAQDNVGG 
Sbjct: 619 EMEILAAERALTVKDEELKTVQERLDAKEKEFEKMKEEMDEEAKDTRKLYTLAQDNVGGE 678

Query: 796 -----DLAIERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQH 855
                D AI RLQ EAAQLEVEAATSALQKLTDMSR+LLNKA  SLE DIGSRSI IQQH
Sbjct: 679 DNNIEDFAIGRLQVEAAQLEVEAATSALQKLTDMSRELLNKASHSLEVDIGSRSIHIQQH 738

Query: 856 DDDNNGVNG-----IDNSNSRFSEVKVEVSRLSSLTEQLLKEAGIFVDAD 894
           +DD + V+      +DN+N+RF+EVKVEVSRLSSLTEQLLKEAGIFVDA+
Sbjct: 739 NDDEDDVDAGTGGWVDNNNTRFNEVKVEVSRLSSLTEQLLKEAGIFVDAN 788

[Close]

BLAST of Chy4G070920 vs. NCBI nr
Match: XP_023535359.1 (myosin-11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1058 bits (2736), Expect = 0.0
Identity = 630/766 (82.25%), Postives = 675/766 (88.12%), Query Frame = 0


Query: 138 QRSSLRFSRNRTNFFYSTNQKRRSHPLKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQ 197
           +RSSLR +RN+T F  ST ++RRSH LKVVQSVLN  KSNLNDNGA+EEAKLLLERLYAQ
Sbjct: 21  KRSSLRLTRNQTKFTSSTTRERRSHSLKVVQSVLNTSKSNLNDNGASEEAKLLLERLYAQ 80

Query: 198 TQRLEEHVSKDPHFPQDVWLGLSLENFESDLQAALAVLKKKEEDLQDAERTILLERSQLN 257
           TQRLEEHVSKD H PQDVWLGLSLEN ES LQAALAVLKKKEEDLQDAERTIL ERSQLN
Sbjct: 81  TQRLEEHVSKDSHSPQDVWLGLSLENLESGLQAALAVLKKKEEDLQDAERTILSERSQLN 140

Query: 258 NAREKLEKQEEEITVAYRKQQELEDELKEANLNLASQARLIDELKLQIREKDEGIAAVES 317
           NAREKLEKQEEEIT AY KQQELEDELK+ANLNLASQAR IDELKLQIREKDE IAAVES
Sbjct: 141 NAREKLEKQEEEITAAYHKQQELEDELKQANLNLASQARQIDELKLQIREKDERIAAVES 200

Query: 318 ALALKEDELKRMRADLAMKSEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLKRTVVE 377
            L LKEDELK+MRADLA KSEEA KT+ ELKSKS+LL EANEVVKRQE ELQMLK+ V+E
Sbjct: 201 TLTLKEDELKKMRADLAKKSEEAIKTDSELKSKSKLLNEANEVVKRQEFELQMLKKAVLE 260

Query: 378 KEKELELSVKLQKLEVERLEVVEKNLEKRTMEWLLAQEELKKTRKEASKKTVEMNKTVND 437
           KE+ELE SVKLQKLE E+LEVVEKNLEKRT EWLL QEELKK RKE+SKK VEMNKTVND
Sbjct: 261 KEQELEASVKLQKLEEEKLEVVEKNLEKRTTEWLLVQEELKKLRKESSKKAVEMNKTVND 320

Query: 438 LNRVKKLLADVKSELVSSQKSLVSSRKKIEEQEDILERQMAELEEQNKGINAYMSSLKDA 497
            NRVKKLLAD KSELVSSQKSLVS+RKKIEEQEDIL +QM ELEEQ KGINAYMSSL+DA
Sbjct: 321 FNRVKKLLADAKSELVSSQKSLVSARKKIEEQEDILGKQMTELEEQKKGINAYMSSLEDA 380

Query: 498 QIEVESERVKLRFVEAHNKELEGDLVKEKELTDELQQQLKREKSYLQQATEEKSLLQNEL 557
           QIE+ESERVKLR  EA NKELE  L  EKELTDELQQQLK+EKS LQ+ TEEKSLLQ EL
Sbjct: 381 QIEIESERVKLRVAEAQNKELERVLFMEKELTDELQQQLKKEKSNLQKVTEEKSLLQKEL 440

Query: 558 EHKRIEFEKTHKLLQDKASELVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKIENLN 617
           EHK IEFEKTH LLQDKASELVEA LEIQ LKS+QVSLQLLLEEKDLEI DAQKKIE LN
Sbjct: 441 EHKHIEFEKTHNLLQDKASELVEADLEIQRLKSQQVSLQLLLEEKDLEIHDAQKKIEILN 500

Query: 618 QEIIELQTLMSSKEAQLDQTNAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTN 677
           +EIIELQTLMSSKEA L QT  MLKEKDE V+IMQNELNDTKLKISEAEA V HIVDLTN
Sbjct: 501 EEIIELQTLMSSKEAMLSQTTVMLKEKDECVQIMQNELNDTKLKISEAEAVVGHIVDLTN 560

Query: 678 KLVISIKDGDEDDVLKLNENLSLNLQQQLFKKPTD-NIRLQKKQLETELELTKESLRRKE 737
           KLVISI DGD DDV +LN+NLS+NLQQQ FK+PTD N+ LQKKQLETELELTKESLR+KE
Sbjct: 561 KLVISINDGD-DDVSELNDNLSINLQQQFFKQPTDDNMGLQKKQLETELELTKESLRQKE 620

Query: 738 MEILAAERALTVKDEELKTVQERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDNVG-GD 797
           MEI AAERALTVKDEELKTV+ERLD KEKEFE MKEEMDEE K LR+ Y LA+D+VG GD
Sbjct: 621 MEIQAAERALTVKDEELKTVRERLDTKEKEFENMKEEMDEEAKDLRKLYALAEDSVGVGD 680

Query: 798 LAIERLQFEAAQLEVEAATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQHDDDNNG 857
           LAIE+LQ EAAQLEVEAATSALQKLTD+SR+LLNKA  SLE D+ +RSI  Q +DDDNN 
Sbjct: 681 LAIEKLQIEAAQLEVEAATSALQKLTDISRELLNKASHSLEGDVDTRSIHFQLYDDDNND 740

Query: 858 VN-------GIDNSNSRFSEVKVEVSRLSSLTEQLLKEAGIFVDAD 894
            +       GIDN++ RF+EVK+EVSRLSSLTEQLLKEAGIFVDAD
Sbjct: 741 DDVDTRIGGGIDNNSQRFNEVKLEVSRLSSLTEQLLKEAGIFVDAD 785

[Close]

BLAST of Chy4G070920 vs. TAIR 10
Match: AT4G32190.1 (Myosin heavy chain-related protein )

HSP 1 Score: 574.7 bits (1480), Expect = 1.3e-163
Identity = 365/737 (49.53%), Postives = 520/737 (70.56%), Query Frame = 0


Query: 158 KRRSHPLKVVQSVLNNCKSNLNDNGANEEAKLLLERLYAQTQRLEEHVSKDPHFPQDVWL 217
           +R+ H L  VQSVL+N + N+NDNG+ E A +L ++L+A+T RLE   ++   +P D  L
Sbjct: 43  RRKRHLLLSVQSVLHNTRPNINDNGSAESANVLFDKLFARTHRLERQTNQHSVYPDDDDL 102

Query: 218 GLS-LENFESDLQAALAVLKKKEEDLQDAERTILLERSQLNNAREKLEKQEEEITVAYRK 277
             S L   ESDL+AAL  L K+EEDL DAER +L ++++LN A+E+LEK+E+ I+ A  K
Sbjct: 103 PYSNLGVLESDLEAALVALLKREEDLHDAERKLLSDKNKLNRAKEELEKREKTISEASLK 162

Query: 278 QQELEDELKEANLNLASQARLIDELKLQIREKDEGIAAVESALALKEDELKRMRADLAMK 337
            + L++ELK AN+ LASQAR I+ELK ++RE+DE  AA++S+L LKE+EL++MR ++A +
Sbjct: 163 HESLQEELKRANVELASQAREIEELKHKLRERDEERAALQSSLTLKEEELEKMRQEIANR 222

Query: 338 SEEAFKTNCELKSKSQLLTEANEVVKRQEVELQMLKRTVVEKEKELELSVKLQKLEVERL 397
           S+E      E +SKSQLL++ANEVVKRQE E+  L+R + EKE+ELE+S   +KLE E+L
Sbjct: 223 SKEVSMAISEFESKSQLLSKANEVVKRQEGEIYALQRALEEKEEELEISKATKKLEQEKL 282

Query: 398 EVVEKNLEKRTMEWLLAQEELKKTRKEASKKTVEMNKTVNDLNRVKKLLADVKSELVSSQ 457
              E NL+K+T EWL+AQ+E+ K ++E  K+  E N+T+ D  +VKKLL DV+ EL+SS+
Sbjct: 283 RETEANLKKQTEEWLIAQDEVNKLKEETVKRLGEANETMEDFMKVKKLLTDVRFELISSR 342

Query: 458 KSLVSSRKKIEEQEDILERQMAELEEQNKGINAYMSSLKDAQIEVESERVKLRFVEAHNK 517
           ++LV SR+++EE+E +LE+Q+ ELEEQ K + +YM SL+DA  EVESERVKLR VEA N 
Sbjct: 343 EALVFSREQMEEKELLLEKQLEELEEQRKSVLSYMQSLRDAHTEVESERVKLRVVEAKNF 402

Query: 518 ELEGDLVKEKELTDELQQQLKREKSYLQQATEEKSLLQNELEHKRIEFEKTHKLLQDKAS 577
            LE ++  +KEL ++L+++L++EK  L+ A  + S++Q+EL  K   F+ +  LLQ+K S
Sbjct: 403 ALEREISVQKELLEDLREELQKEKPLLELAMHDISVIQDELYKKANAFQVSQNLLQEKES 462

Query: 578 ELVEAKLEIQHLKSKQVSLQLLLEEKDLEILDAQKKIENLNQEIIELQTLMSSKEAQLDQ 637
            LVEAKLEIQHLKS+Q SL+LLL+EKD E+ +A+ K+  +NQE+ EL+ LM S+E QL +
Sbjct: 463 SLVEAKLEIQHLKSEQASLELLLQEKDEELAEARNKLGEVNQEVTELKALMISREDQLME 522

Query: 638 TNAMLKEKDERVEIMQNELNDTKLKISEAEAAVEHIVDLTNKLVISIKDGDEDDVLKLNE 697
              MLKEKD  +  ++ EL  +KLK++EAE  VE I +LTN+L++S  +G   + +++N 
Sbjct: 523 ATEMLKEKDVHLHRIEGELGSSKLKVTEAEMVVERIAELTNRLLMSTTNGQNQNAMRINN 582

Query: 698 NLSLNLQQQLFKKPTDNIRLQKKQLETELELTKESLRRKEMEILAAERALTVKDEELKTV 757
            +S++  QQ  +KP D+  ++ K+L  EL  T+E+LR KEME+LA +RALT KDEE+  V
Sbjct: 583 EISIDSMQQPLEKPHDDYGMENKRLVMELSFTRENLRMKEMEVLAVQRALTFKDEEINVV 642

Query: 758 QERLDGKEKEFEKMKEEMDEEGKHLREQYTLAQDNVG----GDLAIERLQFEAAQLEVEA 817
             RL+ KE+E +K+KEE   + + L+  Y LAQ+ VG    GDLAIE LQ EAA LEVEA
Sbjct: 643 MGRLEAKEQELKKLKEETINDSEDLKVLYALAQERVGEKTMGDLAIEMLQLEAANLEVEA 702

Query: 818 ATSALQKLTDMSRDLLNKAGRSLEADIGSRSIRIQQHDDDNNGVNGIDNSNSRFSEVKVE 877
           ATSALQKL  MS +LL +A  S+EAD     +  + +          + SN    EVK E
Sbjct: 703 ATSALQKLAKMSTELLTQADMSIEADTTHTVMPERGYS---------EGSNECLGEVKTE 762

Query: 878 VSRLSSLTEQLLKEAGI 890
           V RL SLTE+LL+ AGI
Sbjct: 763 VVRLWSLTEKLLENAGI 770

[Close]

BLAST of Chy4G070920 vs. TAIR 10
Match: AT5G51940.1 (RNA polymerase Rpb6 )

HSP 1 Score: 222.2 bits (565), Expect = 1.6e-57
Identity = 116/140 (82.86%), Postives = 129/140 (92.14%), Query Frame = 0


Query: 1   MADDDYNDL-DMGYEDEPQEPEIEEGAEEELD-TNTDDVPGEPVEAEEKEDEEPVERVRK 60
           MAD+DYND+ D+GYEDEP EPEIEEG EE+++    DDV GEP+EAE+K + EPV+R RK
Sbjct: 1   MADEDYNDVDDLGYEDEPAEPEIEEGVEEDVEMKENDDVNGEPIEAEDKVETEPVQRPRK 60

Query: 61  TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 120
           TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPD
Sbjct: 61  TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPD 120

Query: 121 GSYEDWGVDELIVEDSWKRQ 139
           GS+E+WGVDELIVEDSWKRQ
Sbjct: 121 GSFEEWGVDELIVEDSWKRQ 140

[Close]

BLAST of Chy4G070920 vs. TAIR 10
Match: AT2G04630.1 (RNA polymerase Rpb6 )

HSP 1 Score: 214.2 bits (544), Expect = 4.4e-55
Identity = 114/140 (81.43%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MADDDYNDL-DMGYEDEPQEPEIEEGAEEELD-TNTDDVPGEPVEAEEKEDEEPVERVRK 60
           MADDDYN++ D+GYEDEP EPEIEEG EE+ D    DDV  +P+E E+K + EPV+R RK
Sbjct: 1   MADDDYNEVDDLGYEDEPAEPEIEEGVEEDADIKENDDVNVDPLETEDKVETEPVQRPRK 60

Query: 61  TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 120
           TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPD
Sbjct: 61  TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPD 120

Query: 121 GSYEDWGVDELIVEDSWKRQ 139
            SYE+WGVDELIVEDSWKRQ
Sbjct: 121 MSYEEWGVDELIVEDSWKRQ 140

[Close]

BLAST of Chy4G070920 vs. TAIR 10
Match: AT5G27220.1 (Frigida-like protein )

HSP 1 Score: 48.1 bits (113), Expect = 4.2e-05
Identity = 130/592 (21.96%), Postives = 261/592 (44.09%), Query Frame = 0


Query: 235 LKKKEEDLQDAERTILLERSQLNNAREKLEKQEEEITVAYRKQQELE-------DELKEA 294
           LK   E L+   R ++L+  +L N    LE++ + +  A  +  +LE        E++E 
Sbjct: 48  LKSASEKLELRFRELVLKEVELQNRSFALEERAKVVEAAEAEMGDLEMKASGFRSEVEEK 107

Query: 295 NLNLASQARLIDELKLQIREKDEGIAAVESALALKEDELKRMRADLAMKSEEAFKTNCEL 354
              L    + ++E  ++ R K   ++ +        + L++ + DL +K E       EL
Sbjct: 108 REELGCLRKSLEECSVEERSKRGQLSEI-------VELLRKSQVDLDLKGE-------EL 167

Query: 355 KSKSQLLTEANEVVKRQEVELQMLKRTVVEKEKELELSVKLQKLEVERLEVVEKNLEKRT 414
           +     L      VK ++  L+       E E+E+E   K   L + ++   +K +E R+
Sbjct: 168 RQMVTHLERYRVEVKEEKEHLRRTDNGRRELEEEIERKTKDLTLVMNKIVDCDKRIETRS 227

Query: 415 MEWLLAQEELKKTRKEASKKTVEMNKTVNDLNRVKKLLA-------DVKSELVSSQKSLV 474
           +E +  Q E++   K+  +  +++ K   D+N  KK L         ++ E+    K L 
Sbjct: 228 LELIKTQGEVELKEKQLDQMKIDLEKYCVDVNAEKKNLGRTQTHRRKLEEEIERKTKDLT 287

Query: 475 SSRKKIEEQEDILERQMAELEEQNKGINAYMSSLKDAQIEVESERVKLRFVEAHNKELEG 534
               KI E E + ER+  EL +    +      L+   I++E  R ++  V  H   LE 
Sbjct: 288 LVMDKIAECEKLFERRSLELIKTQGEVELKGKQLEQMDIDLERHRGEVNVVMEH---LEK 347

Query: 535 DLVKEKELTDELQQQLKREKSYLQQATEEKSLLQNELEHKRIEFEKTHKLLQDKASELVE 594
              + +EL +E++++ K   + L +  E    +  EL  + +  ++  KLL  ++SELV 
Sbjct: 348 SQTRSRELAEEIERKRKELTAVLDKTAEYGKTI--ELVEEELALQQ--KLLDIRSSELVS 407

Query: 595 AKLEIQHLKSKQVSLQL-LLEEKDLEILDAQKKIENLNQEIIELQTLMSSKEAQLDQTNA 654
            K E+  L     SL L L+   + E+ +  ++IE+  +E+ +++ L+  +    +    
Sbjct: 408 KKKELDGL-----SLDLELVNSLNNELKETVQRIESKGKELEDMERLIQERSGHNESIKL 467

Query: 655 MLKEKDERVEIMQNELND-----------------TKLKISEAEAAVEHIVDLTNKLVIS 714
           +L+E  E + I +   N+                 T  ++SE + + +  +D T K    
Sbjct: 468 LLEEHSEELAIKEERHNEIAEAVRKLSLEIVSKEKTIQQLSEKQHSKQTKLDSTEK---C 527

Query: 715 IKDGDEDDVLKLNENLSLNLQQQLFKKPTDNIRLQKKQL--------------------E 774
           +++   + V K NE  S+   +  +++   N  +++K+L                    E
Sbjct: 528 LEETTAELVSKENELCSV---KDTYRECLQNWEIKEKELKSFQEEVKKIQDSLKDFQSKE 587

The following BLAST results are available for this feature:

BLAST of Chy4G070920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ98	2.3e-56	82.86	DNA-directed RNA polymerases II, IV and V subunit 6A OS=Arabidopsis thaliana OX=...	[more]
Q9SJ96	6.2e-54	81.43	DNA-directed RNA polymerases II and V subunit 6B OS=Arabidopsis thaliana OX=3702...	[more]
Q32PE0	2.6e-28	61.07	DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Bos taurus OX=9913...	[more]
P61219	2.6e-28	61.07	DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Mus musculus OX=10...	[more]
O88828	2.6e-28	61.07	DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Rattus norvegicus ...	[more]

BLAST of Chy4G070920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDN9	0.0e+00	97.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G877610 PE=4 SV=1	[more]
A0A5A7T7H9	0.0e+00	92.15	Putative leucine-rich repeat-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3CSI3	0.0e+00	92.03	putative leucine-rich repeat-containing protein DDB_G0290503 OS=Cucumis melo OX=...	[more]
A0A6J1IMM0	6.0e-302	81.54	myosin-11 OS=Cucurbita maxima OX=3661 GN=LOC111476606 PE=4 SV=1	[more]
A0A6J1FCM9	5.1e-301	81.31	myosin-11-like OS=Cucurbita moschata OX=3662 GN=LOC111442800 PE=4 SV=1	[more]

BLAST of Chy4G070920 vs. NCBI nr


Match Name	Identity	Description
XP_004136356.1	97.09	putative leucine-rich repeat-containing protein DDB_G0290503 [Cucumis sativus] >...	[more]
KAA0038818.1	92.15	putative leucine-rich repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008466422.1	92.03	PREDICTED: putative leucine-rich repeat-containing protein DDB_G0290503 [Cucumis...	[more]
XP_038898436.1	86.62	myosin-11 [Benincasa hispida]	[more]
XP_023535359.1	82.25	myosin-11-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy4G070920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32190.1	1.3e-163	49.53	Myosin heavy chain-related protein	[more]
AT5G51940.1	1.6e-57	82.86	RNA polymerase Rpb6	[more]
AT2G04630.1	4.4e-55	81.43	RNA polymerase Rpb6	[more]
AT5G27220.1	4.2e-05	21.96	Frigida-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 571..591
None	No IPR available	COILS	Coil	Coil	coord: 386..406
None	No IPR available	COILS	Coil	Coil	coord: 312..339
None	No IPR available	COILS	Coil	Coil	coord: 599..668
None	No IPR available	COILS	Coil	Coil	coord: 221..304
None	No IPR available	COILS	Coil	Coil	coord: 803..823
None	No IPR available	COILS	Coil	Coil	coord: 711..791
None	No IPR available	COILS	Coil	Coil	coord: 515..563
None	No IPR available	COILS	Coil	Coil	coord: 184..204
None	No IPR available	COILS	Coil	Coil	coord: 459..497
None	No IPR available	COILS	Coil	Coil	coord: 354..381
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR23160	SYNAPTONEMAL COMPLEX PROTEIN-RELATED	coord: 149..889
None	No IPR available	PANTHER	PTHR23160:SF19	MYOSIN HEAVY CHAIN-RELATED PROTEIN	coord: 149..889
IPR006110	RNA polymerase, subunit omega/K/RPB6	SMART	SM01409	RNA_pol_Rpb6_2	coord: 57..110 e-value: 4.7E-6 score: 36.1
IPR006110	RNA polymerase, subunit omega/K/RPB6	PFAM	PF01192	RNA_pol_Rpb6	coord: 59..110 e-value: 1.1E-14 score: 54.1
IPR028363	DNA-directed RNA polymerase, subunit RPB6	PIRSF	PIRSF500154	RPB6	coord: 494..585 e-value: 730.0 score: -1.8 coord: 728..792 e-value: 880.0 score: -2.1 coord: 664..748 e-value: 1500.0 score: -2.8 coord: 226..308 e-value: 710.0 score: -1.8 coord: 393..518 e-value: 1800.0 score: -3.1 coord: 1..133 e-value: 2.9E-53 score: 177.7 coord: 600..685 e-value: 690.0 score: -1.7
IPR012293	RNA polymerase subunit, RPB6/omega	GENE3D	3.90.940.10		coord: 3..133 e-value: 1.6E-48 score: 165.9
IPR006111	Archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit	PIRSF	PIRSF000778	RpoK/RPB6	coord: 232..302 e-value: 1000.0 score: -2.4 coord: 1..133 e-value: 2.2E-46 score: 155.2 coord: 735..807 e-value: 1500.0 score: -3.0 coord: 324..584 e-value: 3800.0 score: -11.4 coord: 605..679 e-value: 1000.0 score: -2.4
IPR006111	Archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit	HAMAP	MF_00192	RNApol_arch_K	coord: 61..116 score: 18.504309
IPR020708	DNA-directed RNA polymerase, 14-18kDa subunit, conserved site	PROSITE	PS01111	RNA_POL_K_14KD	coord: 64..78
IPR036161	RPB6/omega subunit-like superfamily	SUPERFAMILY	63562	RPB6/omega subunit-like	coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G070920.1	Chy4G070920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0010581	regulation of starch biosynthetic process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005665	RNA polymerase II, core complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity