Chy4G070640 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G070640
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	V-type proton ATPase subunit c
Location	chrH04: 3091120 .. 3092467 (+)
RNA-Seq Expression	Chy4G070640
Synteny	Chy4G070640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCATCTCTAAGCTCTTGGTCCCACGCCCTCGTCAGAATCTCCCCTTACACCTTCTCTGCCGTCGGCATTGCCATTTCCATCGGCGTTTCTGTCCTCGGAGCCGCCTGGTATTCTCTTCTTCAACCTCCTTTTTTTTTGTTTCTTCCATTTATAGCCTTACTCTCTCTCTCTCTTCAACTTCTTCCCATTCATGAGCTTTCATATCTCTAATTCTGGAATTGTTGTTATGTTATCTCAGGGGAATCTACATAACCGGAAGTAGTCTGATCGGTGCTGCAATCAAAGCTCCGCGTATTACCTCCAAGAATTTAATTAGGTAACAAATCTCAATCCCGAGTTTATGTTTCCTTATTGGATGTACGTGGAGTTTGATGGAGTTTAAACAAATTCTAATTGCTGAGTTCTGATTTCACTCTTCGTAGTGTTGTGTTTTGACTTGTTCCGAGAAGATTGATCAACTGAAGATAGGATGAAACTTTCTGTTGTTTTATGGTGTCTGATTGATTGAGATTATACTCATGCTTTTGAATCTCAAATTTCTTTTCCATGGTTGGGCTTTGTTATGATATTATCATTTGTTGATTCGAACGGTGCTTTCCACAGTGATTACTACTTTTCAACCTGTGCAATATGTTAAATGTCTTTGCCATCTATAGTGTTAACAAGTATCTAGTACAGGTCATGTTAAATATCTTTGTCATCTCTGTAGTGTTAACAAGTAACAAGTAGTATCCAGAGGTGGTTTAGAATGTCGTGAAGATTGATGTGTCTTTCTGCTCGTCAATCACTAGACCTTTTTGTAATTAGGTATTGGTCTTGTTTGAAGATTTGAGTCTTTTGTAATTAATATGAAGTTTTGACTGTCTTAATGAATGGTTCTTCTCTCTCTTTCAGTGTAATTTTCTGTGAAGCTGTGGCTATATATGGTGTCATTGTGGCCATCATTTTACAAACAAAACTGGAGAGTGTTCCAGCATCTCAAATCTATACTCCTGAGTCTCTAACAGCAGGATATTCAATCTTTGCCTCTGGGATTATTGTCGGCTTTTCTAACTTGTTCTGCGGGTTTGATTCTTCGTCTTTAAACCTTTCCTTTTCTTTAGTAGAATGAAAGAAGAAAAACCCATCAACTGAAAAAATTTAACGGGGAGATATGTTTTGTTTGTAAAGGTTATGTGTAGGGATTATTGGAAGCAGTTGTGCATTGTCTGATGCTCAAAACTCATCTCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGATTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTGCAAAATCAATTTAA

mRNA sequence

ATGGCAGCATCTCTAAGCTCTTGGTCCCACGCCCTCGTCAGAATCTCCCCTTACACCTTCTCTGCCGTCGGCATTGCCATTTCCATCGGCGTTTCTGTCCTCGGAGCCGCCTGGGGAATCTACATAACCGGAAGTAGTCTGATCGGTGCTGCAATCAAAGCTCCGCGTATTACCTCCAAGAATTTAATTAGTGTAATTTTCTGTGAAGCTGTGGCTATATATGGTGTCATTGTGGCCATCATTTTACAAACAAAACTGGAGAGTGTTCCAGCATCTCAAATCTATACTCCTGAGTCTCTAACAGCAGGATATTCAATCTTTGCCTCTGGGATTATTGTCGGCTTTTCTAACTTGTTCTGCGGGTTATGTGTAGGGATTATTGGAAGCAGTTGTGCATTGTCTGATGCTCAAAACTCATCTCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGATTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTGCAAAATCAATTTAA

Coding sequence (CDS)

ATGGCAGCATCTCTAAGCTCTTGGTCCCACGCCCTCGTCAGAATCTCCCCTTACACCTTCTCTGCCGTCGGCATTGCCATTTCCATCGGCGTTTCTGTCCTCGGAGCCGCCTGGGGAATCTACATAACCGGAAGTAGTCTGATCGGTGCTGCAATCAAAGCTCCGCGTATTACCTCCAAGAATTTAATTAGTGTAATTTTCTGTGAAGCTGTGGCTATATATGGTGTCATTGTGGCCATCATTTTACAAACAAAACTGGAGAGTGTTCCAGCATCTCAAATCTATACTCCTGAGTCTCTAACAGCAGGATATTCAATCTTTGCCTCTGGGATTATTGTCGGCTTTTCTAACTTGTTCTGCGGGTTATGTGTAGGGATTATTGGAAGCAGTTGTGCATTGTCTGATGCTCAAAACTCATCTCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGATTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTGCAAAATCAATTTAA

Protein sequence

MAASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKSI*

Homology

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BLAST of Chy4G070640 vs. ExPASy Swiss-Prot
Match: Q9SZY7 (V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE=1 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.6e-76
Identity = 155/170 (91.18%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 6   SSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV 65
           SSW  ALVRISPYTFSA+GIAISIGVSVLGAAWGIYITGSSLIGAAI+APRITSKNLISV
Sbjct: 11  SSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISV 70

Query: 66  IFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFCGLCVG 125
           IFCEAVAIYGVIVAIILQTKLESVP+S++Y  ESL AGY+IFASGIIVGF+NL CGLCVG
Sbjct: 71  IFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVG 130

Query: 126 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 176
           IIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 131 IIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

[Close]

BLAST of Chy4G070640 vs. ExPASy Swiss-Prot
Match: Q9SLA2 (V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE=1 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.6e-76
Identity = 156/175 (89.14%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 1   MAASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 60
           +A   SSW  ALVRISPYTFSA+GIAISIGVSVLGAAWGIYITGSSLIGAAI+APRITSK
Sbjct: 4   VAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSK 63

Query: 61  NLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFC 120
           NLISVIFCEAVAIYGVIVAIILQTKLESVP+S++Y  ESL AGY+IFASGIIVGF+NL C
Sbjct: 64  NLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVC 123

Query: 121 GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 176
           GLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 124 GLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

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BLAST of Chy4G070640 vs. ExPASy Swiss-Prot
Match: P23968 (V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VMA16 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-46
Identity = 96/160 (60.00%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 12  LVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 71
           L+R SPY ++ +GIA+ +G+SV+GAAWGI+ITGSS+IGA ++APRIT+KNLIS+IFCE V
Sbjct: 51  LLRTSPYMWANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISIIFCEVV 110

Query: 72  AIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFCGLCVGIIGSSC 131
           AIYG+I+AI+  +KL    A  +Y+  +L  GYS+F +GI VG SNL CG+ VGI G++ 
Sbjct: 111 AIYGLIIAIVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGITGATA 170

Query: 132 ALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQAT 172
           A+SDA +S+LFVKILVIEIFGS LGL G+IVG++M+ +A+
Sbjct: 171 AISDAADSALFVKILVIEIFGSILGLLGLIVGLLMAGKAS 210

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BLAST of Chy4G070640 vs. ExPASy Swiss-Prot
Match: Q91V37 (V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6v0b PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-44
Identity = 94/160 (58.75%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 12  LVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 71
           L   SP+ +S +GI ++I +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 72  AIYGVIVAIILQTKLESVPASQ--IYTPESLTAGYSIFASGIIVGFSNLFCGLCVGIIGS 131
           AIYG+I+AI++    E   A++       +  AGYS+F +G+ VG SNLFCG+CVGI+GS
Sbjct: 101 AIYGIIMAIVISNMAEPFSATEPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 132 SCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 170
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

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BLAST of Chy4G070640 vs. ExPASy Swiss-Prot
Match: Q2TA24 (V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-44
Identity = 94/160 (58.75%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 12  LVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 71
           L   SP+ +S +GI ++I +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 72  AIYGVIVAIILQTKLESVPAS--QIYTPESLTAGYSIFASGIIVGFSNLFCGLCVGIIGS 131
           AIYG+I+AI++    E   A+  +     +  AGYS+F +G+ VG SNLFCG+CVGI+GS
Sbjct: 101 AIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 132 SCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 170
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

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BLAST of Chy4G070640 vs. ExPASy TrEMBL
Match: A0A0A0LGQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878880 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.7e-84
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MAASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 60
           MAASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK
Sbjct: 1   MAASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 60

Query: 61  NLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFC 120
           NLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFC
Sbjct: 61  NLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFC 120

Query: 121 GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKSI 178
           GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK I
Sbjct: 121 GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 177

[Close]

BLAST of Chy4G070640 vs. ExPASy TrEMBL
Match: A0A5D3E5L5 (V-type proton ATPase subunit c''1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007260 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 171/176 (97.16%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 2   AASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN 61
           A+SLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN
Sbjct: 3   ASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN 62

Query: 62  LISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFCG 121
           LISVIFCEAVAIYGVIVAIILQTKLESV ASQI+TPESLTAGYSIFASGIIVGF+NLFCG
Sbjct: 63  LISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCG 122

Query: 122 LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKSI 178
           LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK I
Sbjct: 123 LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178

[Close]

BLAST of Chy4G070640 vs. ExPASy TrEMBL
Match: A0A1S3CR34 (V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103503804 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 171/176 (97.16%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 2   AASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN 61
           A+SLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN
Sbjct: 3   ASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN 62

Query: 62  LISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFCG 121
           LISVIFCEAVAIYGVIVAIILQTKLESV ASQI+TPESLTAGYSIFASGIIVGF+NLFCG
Sbjct: 63  LISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCG 122

Query: 122 LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKSI 178
           LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK I
Sbjct: 123 LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178

[Close]

BLAST of Chy4G070640 vs. ExPASy TrEMBL
Match: A9PD21 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G248700 PE=2 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.2e-79
Identity = 164/172 (95.35%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 6   SSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV 65
           SSWSHALVRISPYTFSAVGIAI+IGVSVLGAAWGIYITGSSLIGAA+KAPRITSKNLISV
Sbjct: 3   SSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAVKAPRITSKNLISV 62

Query: 66  IFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFCGLCVG 125
           IFCEAVAIYGVIVAIILQTKLESVPASQIY PESL AGY+IFASGIIVGF+NLFCGLCVG
Sbjct: 63  IFCEAVAIYGVIVAIILQTKLESVPASQIYDPESLRAGYAIFASGIIVGFANLFCGLCVG 122

Query: 126 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKSI 178
           IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPA+S+
Sbjct: 123 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPARSV 174

[Close]

BLAST of Chy4G070640 vs. ExPASy TrEMBL
Match: A0A6J1ITC9 (V-type proton ATPase subunit c''2 OS=Cucurbita maxima OX=3661 GN=LOC111480416 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79
Identity = 164/177 (92.66%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 1   MAASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 60
           MA  L SWSHALVRISPYTFSAVGIAI+IG+SVLGAAWGIYITGSSLIGAAIKAPRITSK
Sbjct: 6   MAGDLRSWSHALVRISPYTFSAVGIAIAIGISVLGAAWGIYITGSSLIGAAIKAPRITSK 65

Query: 61  NLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFC 120
           NLISVIFCEAVAIYGVIVAIILQTKLESVPAS+IY PESL AGYSIFASGIIVGF+NL C
Sbjct: 66  NLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGFANLVC 125

Query: 121 GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKSI 178
           GLCVG+IGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK++
Sbjct: 126 GLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKAV 182

[Close]

BLAST of Chy4G070640 vs. NCBI nr
Match: XP_004136340.1 (V-type proton ATPase subunit c''2 [Cucumis sativus] >KGN60119.1 hypothetical protein Csa_002152 [Cucumis sativus])

HSP 1 Score: 323 bits (827), Expect = 1.04e-110
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MAASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 60
           MAASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK
Sbjct: 1   MAASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 60

Query: 61  NLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFC 120
           NLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFC
Sbjct: 61  NLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFC 120

Query: 121 GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKSI 177
           GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK I
Sbjct: 121 GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 177

[Close]

BLAST of Chy4G070640 vs. NCBI nr
Match: XP_008466380.1 (PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo] >KAA0038796.1 V-type proton ATPase subunit c''1 [Cucumis melo var. makuwa] >TYK31417.1 V-type proton ATPase subunit c''1 [Cucumis melo var. makuwa])

HSP 1 Score: 314 bits (804), Expect = 3.45e-107
Identity = 171/176 (97.16%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 2   AASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN 61
           A+SLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN
Sbjct: 3   ASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN 62

Query: 62  LISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFCG 121
           LISVIFCEAVAIYGVIVAIILQTKLESV ASQI+TPESLTAGYSIFASGIIVGF+NLFCG
Sbjct: 63  LISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCG 122

Query: 122 LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKSI 177
           LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK I
Sbjct: 123 LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178

[Close]

BLAST of Chy4G070640 vs. NCBI nr
Match: XP_038898797.1 (V-type proton ATPase subunit c''2 isoform X2 [Benincasa hispida])

HSP 1 Score: 310 bits (794), Expect = 1.33e-105
Identity = 168/177 (94.92%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MAASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 60
           MAASLSSWSHALVRISPYTFSAVGIAI+IGVSVLGAAWGIYITGSSLIGAAIKAPRITSK
Sbjct: 6   MAASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 65

Query: 61  NLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFC 120
           NLISVIFCEAVAIYGVIVAIILQTKLESV ASQI+ PESLTAGYSIF+SGIIVGF+NL C
Sbjct: 66  NLISVIFCEAVAIYGVIVAIILQTKLESVSASQIHAPESLTAGYSIFSSGIIVGFANLVC 125

Query: 121 GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKSI 177
           GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK++
Sbjct: 126 GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKAV 182

[Close]

BLAST of Chy4G070640 vs. NCBI nr
Match: XP_002308639.1 (V-type proton ATPase subunit c''2 [Populus trichocarpa] >ABK94274.1 unknown [Populus trichocarpa] >PNT33615.1 hypothetical protein POPTR_006G248700 [Populus trichocarpa] >PNT33616.1 hypothetical protein POPTR_006G248700 [Populus trichocarpa])

HSP 1 Score: 307 bits (787), Expect = 1.17e-104
Identity = 164/172 (95.35%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 6   SSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV 65
           SSWSHALVRISPYTFSAVGIAI+IGVSVLGAAWGIYITGSSLIGAA+KAPRITSKNLISV
Sbjct: 3   SSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAVKAPRITSKNLISV 62

Query: 66  IFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFCGLCVG 125
           IFCEAVAIYGVIVAIILQTKLESVPASQIY PESL AGY+IFASGIIVGF+NLFCGLCVG
Sbjct: 63  IFCEAVAIYGVIVAIILQTKLESVPASQIYDPESLRAGYAIFASGIIVGFANLFCGLCVG 122

Query: 126 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKSI 177
           IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPA+S+
Sbjct: 123 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPARSV 174

[Close]

BLAST of Chy4G070640 vs. NCBI nr
Match: XP_023523441.1 (V-type proton ATPase subunit c''2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307 bits (786), Expect = 2.20e-104
Identity = 165/177 (93.22%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 1   MAASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 60
           MA  L SWSHALVRISPYTFSAVGIAI+IGVSVLGAAWGIYITGSSLIGAAIKAPRITSK
Sbjct: 6   MAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 65

Query: 61  NLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFC 120
           NLISVIFCEAVAIYGVIVAIILQTKLESVPAS+IY PESL AGYSIFASGIIVGF+NL C
Sbjct: 66  NLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGFANLVC 125

Query: 121 GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKSI 177
           GLCVG+IGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK++
Sbjct: 126 GLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKAV 182

[Close]

BLAST of Chy4G070640 vs. TAIR 10
Match: AT2G25610.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 286.2 bits (731), Expect = 1.8e-77
Identity = 156/175 (89.14%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 1   MAASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 60
           +A   SSW  ALVRISPYTFSA+GIAISIGVSVLGAAWGIYITGSSLIGAAI+APRITSK
Sbjct: 4   VAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSK 63

Query: 61  NLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFC 120
           NLISVIFCEAVAIYGVIVAIILQTKLESVP+S++Y  ESL AGY+IFASGIIVGF+NL C
Sbjct: 64  NLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVC 123

Query: 121 GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 176
           GLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 124 GLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

[Close]

BLAST of Chy4G070640 vs. TAIR 10
Match: AT4G32530.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 286.2 bits (731), Expect = 1.8e-77
Identity = 155/170 (91.18%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 6   SSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV 65
           SSW  ALVRISPYTFSA+GIAISIGVSVLGAAWGIYITGSSLIGAAI+APRITSKNLISV
Sbjct: 11  SSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISV 70

Query: 66  IFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFCGLCVG 125
           IFCEAVAIYGVIVAIILQTKLESVP+S++Y  ESL AGY+IFASGIIVGF+NL CGLCVG
Sbjct: 71  IFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVG 130

Query: 126 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 176
           IIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 131 IIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

[Close]

BLAST of Chy4G070640 vs. TAIR 10
Match: AT4G32530.2 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 270.4 bits (690), Expect = 1.0e-72
Identity = 155/200 (77.50%), Postives = 163/200 (81.50%), Query Frame = 0


Query: 6   SSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV 65
           SSW  ALVRISPYTFSA+GIAISIGVSVLGAAWGIYITGSSLIGAAI+APRITSKNLISV
Sbjct: 11  SSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISV 70

Query: 66  IFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFCG---- 125
           IFCEAVAIYGVIVAIILQTKLESVP+S++Y  ESL AGY+IFASGIIVGF+NL CG    
Sbjct: 71  IFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGSVST 130

Query: 126 --------------------------LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSAL 176
                                     LCVGIIGSSCALSDAQNS+LFVKILVIEIFGSAL
Sbjct: 131 LFSFLTVLVFGFHCQICNRGPHFSCRLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSAL 190

[Close]

BLAST of Chy4G070640 vs. TAIR 10
Match: AT1G75630.1 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 )

HSP 1 Score: 82.4 bits (202), Expect = 4.0e-16
Identity = 51/151 (33.77%), Postives = 90/151 (59.60%), Query Frame = 0


Query: 20  FSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79
           F  +G A ++  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 15  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 74

Query: 80  IILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFCGLCVGIIGSSCALSDAQNS 139
           +I+ T +   P ++ Y    L  GY+  +SG+  G + L  G+ +GI+G +   ++AQ  
Sbjct: 75  VIISTGIN--PKAKSY---YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 134

Query: 140 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 171
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 135 KLFVGMILILIFAEALALYGLIVGIILSSRA 160

[Close]

BLAST of Chy4G070640 vs. TAIR 10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 82.4 bits (202), Expect = 4.0e-16
Identity = 51/151 (33.77%), Postives = 90/151 (59.60%), Query Frame = 0


Query: 20  FSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79
           F  +G A ++  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 14  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 73

Query: 80  IILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFCGLCVGIIGSSCALSDAQNS 139
           +I+ T +   P ++ Y    L  GY+  +SG+  G + L  G+ +GI+G +   ++AQ  
Sbjct: 74  VIISTGIN--PKAKSY---YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 133

Query: 140 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 171
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 134 KLFVGMILILIFAEALALYGLIVGIILSSRA 159

The following BLAST results are available for this feature:

BLAST of Chy4G070640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZY7	2.6e-76	91.18	V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE...	[more]
Q9SLA2	2.6e-76	89.14	V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE...	[more]
P23968	1.6e-46	60.00	V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508...	[more]
Q91V37	1.2e-44	58.75	V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6...	[more]
Q2TA24	1.5e-44	58.75	V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B...	[more]

BLAST of Chy4G070640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGQ0	2.7e-84	99.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878880 PE=3 SV=1	[more]
A0A5D3E5L5	1.2e-81	97.16	V-type proton ATPase subunit c''1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CR34	1.2e-81	97.16	V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103503804 PE=3 S...	[more]
A9PD21	1.2e-79	95.35	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G248700 PE=2 ...	[more]
A0A6J1ITC9	2.0e-79	92.66	V-type proton ATPase subunit c''2 OS=Cucurbita maxima OX=3661 GN=LOC111480416 PE...	[more]

BLAST of Chy4G070640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136340.1	1.04e-110	99.44	V-type proton ATPase subunit c''2 [Cucumis sativus] >KGN60119.1 hypothetical pro...	[more]
XP_008466380.1	3.45e-107	97.16	PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo] >KAA0038796.1 V-type...	[more]
XP_038898797.1	1.33e-105	94.92	V-type proton ATPase subunit c''2 isoform X2 [Benincasa hispida]	[more]
XP_002308639.1	1.17e-104	95.35	V-type proton ATPase subunit c''2 [Populus trichocarpa] >ABK94274.1 unknown [Pop...	[more]
XP_023523441.1	2.20e-104	93.22	V-type proton ATPase subunit c''2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy4G070640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25610.1	1.8e-77	89.14	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G32530.1	1.8e-77	91.18	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G32530.2	1.0e-72	77.50	ATPase, F0/V0 complex, subunit C protein	[more]
AT1G75630.1	4.0e-16	33.77	vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4	[more]
AT1G19910.1	4.0e-16	33.77	ATPase, F0/V0 complex, subunit C protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000245	V-ATPase proteolipid subunit	PRINTS	PR00122	VACATPASE	coord: 145..168 score: 47.15 coord: 118..144 score: 35.96 coord: 62..86 score: 34.11 coord: 36..60 score: 23.26
None	No IPR available	GENE3D	1.20.120.610		coord: 18..173 e-value: 1.2E-52 score: 179.5
None	No IPR available	PANTHER	PTHR10263:SF56	V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT	coord: 5..174
None	No IPR available	PANTHER	PTHR10263	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	coord: 5..174
None	No IPR available	CDD	cd18178	ATP-synt_Vo_c_ATP6F_rpt2	coord: 102..166 e-value: 2.08653E-25 score: 91.0291
None	No IPR available	CDD	cd18177	ATP-synt_Vo_c_ATP6F_rpt1	coord: 20..82 e-value: 1.50036E-26 score: 93.8663
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 24..82 e-value: 2.1E-14 score: 53.5 coord: 107..166 e-value: 1.6E-10 score: 41.1
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 16..85
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 99..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G070640.1	Chy4G070640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
molecular_function	GO:0015078	proton transmembrane transporter activity