Chy4G069870 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G069870
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	S-protein homolog
Location	chrH04: 2379412 .. 2379876 (-)
RNA-Seq Expression	Chy4G069870
Synteny	Chy4G069870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAATCAAAAAGGTGGGAAAGGTCGAAGATATGGAAGCTCTCAAATATATAGCAATCGTTGGTGTAATTTTAGCATTGATTGACGAATGCAATGGGCAACCTGGTGCAGAGGTTCCATTGAGTTCATGGAAAATTAATATTTTGAACGAGATGACCAAAGACTCATTGTTTCTTCATTGTAAATCTAAAGATGATGATTTAGGTGCACGGAATTTAGGTATAAAGCAACAATTTTCATGGATTTTCAAGGAAAATTTATGGCAAACAACACTGTATTGGTGTGATATGCACAATGCCAATAGTCATGCTTCATTTAACGTATTTTGGCCCGAAAAATCCGGTTGGCTTGCTTTTAGATGTCAACTTAGAAACTGCATTTGGTCGGCTCGAGATGATGGAATTTACTTGAAGACCAACCCTCATAATACTTTTGAGCTCATACATACTTGGGAACCCAGAATGTGA

mRNA sequence

AGAATCAAAAAGGTGGGAAAGGTCGAAGATATGGAAGCTCTCAAATATATAGCAATCGTTGGTGTAATTTTAGCATTGATTGACGAATGCAATGGGCAACCTGGTGCAGAGGTTCCATTGAGTTCATGGAAAATTAATATTTTGAACGAGATGACCAAAGACTCATTGTTTCTTCATTGTAAATCTAAAGATGATGATTTAGGTGCACGGAATTTAGGTATAAAGCAACAATTTTCATGGATTTTCAAGGAAAATTTATGGCAAACAACACTGTATTGGTGTGATATGCACAATGCCAATAGTCATGCTTCATTTAACGTATTTTGGCCCGAAAAATCCGGTTGGCTTGCTTTTAGATGTCAACTTAGAAACTGCATTTGGTCGGCTCGAGATGATGGAATTTACTTGAAGACCAACCCTCATAATACTTTTGAGCTCATACATACTTGGGAACCCAGAATGTGA

Coding sequence (CDS)

AGAATCAAAAAGGTGGGAAAGGTCGAAGATATGGAAGCTCTCAAATATATAGCAATCGTTGGTGTAATTTTAGCATTGATTGACGAATGCAATGGGCAACCTGGTGCAGAGGTTCCATTGAGTTCATGGAAAATTAATATTTTGAACGAGATGACCAAAGACTCATTGTTTCTTCATTGTAAATCTAAAGATGATGATTTAGGTGCACGGAATTTAGGTATAAAGCAACAATTTTCATGGATTTTCAAGGAAAATTTATGGCAAACAACACTGTATTGGTGTGATATGCACAATGCCAATAGTCATGCTTCATTTAACGTATTTTGGCCCGAAAAATCCGGTTGGCTTGCTTTTAGATGTCAACTTAGAAACTGCATTTGGTCGGCTCGAGATGATGGAATTTACTTGAAGACCAACCCTCATAATACTTTTGAGCTCATACATACTTGGGAACCCAGAATGTGA

Protein sequence

RIKKVGKVEDMEALKYIAIVGVILALIDECNGQPGAEVPLSSWKINILNEMTKDSLFLHCKSKDDDLGARNLGIKQQFSWIFKENLWQTTLYWCDMHNANSHASFNVFWPEKSGWLAFRCQLRNCIWSARDDGIYLKTNPHNTFELIHTWEPRM*

Homology

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BLAST of Chy4G069870 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24
Identity = 48/113 (42.48%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 40  LSSWKINILNEMTK-DSLFLHCKSKDDDLGARNLGIKQQFSWIFKENLWQTTLYWCDMHN 99
           +S W++ ++N +T  ++LF+HCKSK+DDLG  NL  + +FSW F EN+  +T +WC M+ 
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 100 ANSHASFNVFWPEKSGWLAFRCQLRNCIWSARDDGIYLKTNPHNTFELIHTWE 152
            N H + NVFW +    L  RC  +NCIW+A+ DG+YL  +      L   WE
Sbjct: 98  DNGHMNVNVFWDDVI--LFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]

BLAST of Chy4G069870 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-21
Identity = 44/113 (38.94%), Postives = 69/113 (61.06%), Query Frame = 0


Query: 40  LSSWKINILNEMTK-DSLFLHCKSKDDDLGARNLGIKQQFSWIFKENLWQTTLYWCDMHN 99
           +S W++ + N +T  ++LF+HCKSK++DLG  NL    +FSW F EN+  +TL+WC M  
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 100 ANSHASFNVFWPEKSGWLAFRCQLRNCIWSARDDGIYLKTNPHNTFELIHTWE 152
            + H +  VFW +    L  RC  +NC+W+A++DG+YL  +      L   W+
Sbjct: 98  DDGHMNVKVFWDDVI--LFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Chy4G069870 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.3e-11
Identity = 34/113 (30.09%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 39  PLSSWKINILNEMTKD-SLFLHCKSKDDDLGARNLGIKQQFSWIFKENLWQTTLYWCDMH 98
           P S   + I N++    +L  HCKSKDDDLG R L   + +S+ F    +  TLY+C   
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 99  NANSHASFNVFWPEKSGWLAFRCQLRNCIWSARDDGIYLKTNPHNTFELIHTW 151
             N   SF+++   +      +C+   C+W  R +G     +    F+L + W
Sbjct: 104 WPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Chy4G069870 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-10
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 46  NILNEMTKDSLFLHCKSKDDDLGARNLGIKQQFSWIFKENLWQTTLYWCDMHNANSHASF 105
           N LN   K+ L +HCKSK++D+G + L I +  S+ FK N W TT +WC+++    +  +
Sbjct: 30  NELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRY 89

Query: 106 NVFWPEKSGWLAFRCQLRNCIWSARDDGIY 136
                 ++  L F     +  W ARDDGIY
Sbjct: 90  RGITAYQAIGL-FAKDGSSYNWLARDDGIY 118

[Close]

BLAST of Chy4G069870 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 27/89 (30.34%), Postives = 48/89 (53.93%), Query Frame = 0


Query: 45  INILNEMTKDSLFLHCKSKDDDLGARNLGIKQQFSWIFKENLWQTTLYWCDMHNANSHAS 104
           + + N +    L +HCKSK DDLG   +  KQ++ + F+ NLW++TL++C     +   S
Sbjct: 31  VTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKS 90

Query: 105 FNVFWPEKSGWLAFRCQLRNCIWSARDDG 134
           F+++  ++   +   CQ     W  + DG
Sbjct: 91  FDIYDAQRDQGICDDCQ-----WEIKPDG 114

[Close]

BLAST of Chy4G069870 vs. ExPASy TrEMBL
Match: A0A6J1L0E8 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111497942 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33
Identity = 64/143 (44.76%), Postives = 91/143 (63.64%), Query Frame = 0


Query: 15  KYIAIVGVILALIDECNGQPGAE----VPLSSWKINILNEMTKDSLFLHCKSKDDDLGAR 74
           +++     +L L+     QP A     VP+  W+++++N +   +LF+HCKSKDDDLG  
Sbjct: 52  RHLKAAAFLLGLLASALTQPLAMALGIVPIQKWRVHVVNRLNNATLFVHCKSKDDDLGFH 111

Query: 75  NL-GIKQQFSWIFKENLWQTTLYWCDMHNANSHASFNVFWPEKSG-WLAFRCQLRNCIWS 134
           NL GI  +F W FK NLW TTL+WC +   N++ SF  FW EK+  WL +RC  RNCIW+
Sbjct: 112 NLVGIGSEFQWSFKNNLWATTLFWCLLRKPNAYVSFEAFWIEKTHIWLNYRCYGRNCIWT 171

Query: 135 ARDDGIYLKTNPHNTFELIHTWE 152
           A+DDG+YL+ NP    E +H W+
Sbjct: 172 AKDDGVYLRNNPDGVDERVHKWK 194

[Close]

BLAST of Chy4G069870 vs. ExPASy TrEMBL
Match: A0A6J1H9E9 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460817 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33
Identity = 64/146 (43.84%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 12  EALKYIAIVGVILALIDECNGQPGAE----VPLSSWKINILNEMTKDSLFLHCKSKDDDL 71
           E  +++     +L L+     QP A     VP+ +W+++++N +   +LF+HCKSKDDDL
Sbjct: 49  EKKRHLKAAAFLLGLLASALTQPLAMAIGIVPIQNWRVHVVNRLNNATLFVHCKSKDDDL 108

Query: 72  GARNL-GIKQQFSWIFKENLWQTTLYWCDMHNANSHASFNVFWPEKSG-WLAFRCQLRNC 131
           G  NL G+  +F W FK NLW TTL+WC +   N++ SF  FW EK+  WL +RC   NC
Sbjct: 109 GFHNLVGVGSEFQWSFKNNLWATTLFWCLLRKPNAYVSFEAFWIEKTHIWLNYRCHGGNC 168

Query: 132 IWSARDDGIYLKTNPHNTFELIHTWE 152
           IW+ARDDG+YL+ NP +  E +H W+
Sbjct: 169 IWTARDDGVYLRNNPDSVDERVHKWK 194

[Close]

BLAST of Chy4G069870 vs. ExPASy TrEMBL
Match: A0A6J1ESA0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111437334 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 9.2e-33
Identity = 62/118 (52.54%), Postives = 80/118 (67.80%), Query Frame = 0


Query: 35  GAEVPLSSWKINILNEMTKDSLFLHCKSKDDDLGARNLGIKQQFSWIFKENLWQTTLYWC 94
           GA VP  SW++ I+N+ +K  L +HCKS DDDLGA  + +   + W FK NLW +T +WC
Sbjct: 17  GAPVPFGSWRVVIINDQSKAQLNVHCKSGDDDLGAHIIKVADDYDWKFKVNLWGSTRFWC 76

Query: 95  DMHNANSHASFNVFWPE-KSGWLAFRCQLRNCIWSARDDGIYLKTNPHNTFELIHTWE 152
              + N H SF+VFWPE  S WL  RC   +CIW A+D+GIYLK +P NTFELIH W+
Sbjct: 77  TFDSQNGHLSFDVFWPEGDSTWLLERCGYGSCIWVAKDEGIYLKNDPRNTFELIHKWK 134

[Close]

BLAST of Chy4G069870 vs. ExPASy TrEMBL
Match: A0A1S4E390 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 2.3e-31
Identity = 67/147 (45.58%), Postives = 93/147 (63.27%), Query Frame = 0


Query: 7   KVEDMEALKYIAIVGVILALIDECNGQPGAEVPLSSWKINILNEMTKD-SLFLHCKSKDD 66
           K+E M ++K   +V   L ++     +P   + L  W I+I+N ++ D +LF+HC+SKDD
Sbjct: 25  KLETMRSMKNHFLVFCFLFVLSLAIVKPTKAIGLERWHIHIVNGLSNDQNLFVHCQSKDD 84

Query: 67  DLGARNLGIKQQFSWIFKENLWQTTLYWCDMHNANSHA-SFNVFWPE-KSGWLAFRCQLR 126
           DLG R L +  +F+W FK N W TTL+WC +   N+ + SF  FW E KS WL +RC   
Sbjct: 85  DLGKRYLSVGTEFNWTFKINFWDTTLFWCYLQKPNAESVSFEAFWVERKSIWLFYRCFKS 144

Query: 127 NCIWSARDDGIYLKTNPHNTFELIHTW 151
           NCIW+A+DDGIYLK NP N   L+H W
Sbjct: 145 NCIWTAKDDGIYLKDNPANRDALVHNW 171

[Close]

BLAST of Chy4G069870 vs. ExPASy TrEMBL
Match: A0A6J5VTZ1 (S-protein homolog OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51617 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 8.6e-31
Identity = 64/143 (44.76%), Postives = 88/143 (61.54%), Query Frame = 0


Query: 16  YIAIVGVILALIDECN--GQPGAEVPLSSWKINILNEM-TKDSLFLHCKSKDDDLGARNL 75
           + AI    LAL    N   Q     P++ W ++++N+M    +L  HCKSKDDDLG R++
Sbjct: 18  FAAIFLAALALPCHANSANQTNLGYPINKWVVHVVNQMGASKALVAHCKSKDDDLGIRDV 77

Query: 76  GIKQQFSWIFKENLWQTTLYWCDMHNANSHASFNVFWPE---KSGWLAFRCQLRNCIWSA 135
               +F+W FKEN   TTL+WC++HN + HA+F VFW E   KS WL +RC  + C W A
Sbjct: 78  PPGNEFNWSFKENFGGTTLFWCNIHNNHQHANFQVFWHEDETKSSWLHYRCNWKECFWVA 137

Query: 136 RDDGIYLKTNPHNTFELIHTWEP 153
           +DDGIY++  P +  EL H WEP
Sbjct: 138 KDDGIYIRNTPESRDELQHQWEP 160

[Close]

BLAST of Chy4G069870 vs. NCBI nr
Match: KGN60342.2 (hypothetical protein Csa_002569, partial [Cucumis sativus])

HSP 1 Score: 302 bits (773), Expect = 3.14e-103
Identity = 141/154 (91.56%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   RIKKVGKVEDMEALKYIAIVGVILALIDECNGQPGAEVPLSSWKINILNEMTKDSLFLHC 60
           R K V KVEDMEALKYIAIV VILALI ECNGQPGAEVPLSSWKINILNEMTKD+LFL C
Sbjct: 1   RNKAVAKVEDMEALKYIAIVCVILALIGECNGQPGAEVPLSSWKINILNEMTKDTLFLQC 60

Query: 61  KSKDDDLGARNLGIKQQFSWIFKENLWQTTLYWCDMHNANSHASFNVFWPEKSGWLAFRC 120
           KSKDDDLGA+NLG+KQQFSW FKENLWQTTLYWC MHNA SHASFNVFWPEKSGWLAFRC
Sbjct: 61  KSKDDDLGAQNLGVKQQFSWSFKENLWQTTLYWCYMHNAESHASFNVFWPEKSGWLAFRC 120

Query: 121 QLRNCIWSARDDGIYLKTNPHNTFELIHTWEPRM 154
           QLRNCIWSARDDGIYLKTNPHNTFELIHTWEP M
Sbjct: 121 QLRNCIWSARDDGIYLKTNPHNTFELIHTWEPGM 154

[Close]

BLAST of Chy4G069870 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 291 bits (744), Expect = 5.90e-99
Identity = 134/144 (93.06%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 11  MEALKYIAIVGVILALIDECNGQPGAEVPLSSWKINILNEMTKDSLFLHCKSKDDDLGAR 70
           MEALKYIAIV VILALI ECNGQPGAEVPLSSWKINILNEMTKD+LFL CKSKDDDLGA+
Sbjct: 1   MEALKYIAIVCVILALIGECNGQPGAEVPLSSWKINILNEMTKDTLFLQCKSKDDDLGAQ 60

Query: 71  NLGIKQQFSWIFKENLWQTTLYWCDMHNANSHASFNVFWPEKSGWLAFRCQLRNCIWSAR 130
           NLG+KQQFSW FKENLWQTTLYWC MHNA SHASFNVFWPEKSGWLAFRCQLRNCIWSAR
Sbjct: 61  NLGVKQQFSWSFKENLWQTTLYWCYMHNAESHASFNVFWPEKSGWLAFRCQLRNCIWSAR 120

Query: 131 DDGIYLKTNPHNTFELIHTWEPRM 154
           DDGIYLKTNPHNTFELIHTWEP M
Sbjct: 121 DDGIYLKTNPHNTFELIHTWEPGM 144

[Close]

BLAST of Chy4G069870 vs. NCBI nr
Match: KAE8651384.1 (hypothetical protein Csa_001671 [Cucumis sativus])

HSP 1 Score: 291 bits (744), Expect = 7.77e-98
Identity = 130/146 (89.04%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 9   EDMEALKYIAIVGVILALIDECNGQPGAEVPLSSWKINILNEMTKDSLFLHCKSKDDDLG 68
           +DMEALKYIA+VGVILALI ECNGQPGAEVPLSSWK+NILNEMTKDSLF+ CKSKDDDLG
Sbjct: 74  QDMEALKYIAVVGVILALIGECNGQPGAEVPLSSWKVNILNEMTKDSLFIRCKSKDDDLG 133

Query: 69  ARNLGIKQQFSWIFKENLWQTTLYWCDMHNANSHASFNVFWPEKSGWLAFRCQLRNCIWS 128
           A+NLG+KQQFSW FKENLWQTTLYWC MHNA SHASFNV+WPE+SGWLAFRCQLRNCIWS
Sbjct: 134 AQNLGVKQQFSWSFKENLWQTTLYWCYMHNAKSHASFNVYWPERSGWLAFRCQLRNCIWS 193

Query: 129 ARDDGIYLKTNPHNTFELIHTWEPRM 154
           ARDDGIYLKTN HNT+ELIHTWEP M
Sbjct: 194 ARDDGIYLKTNTHNTYELIHTWEPGM 219

[Close]

BLAST of Chy4G069870 vs. NCBI nr
Match: XP_004136435.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 287 bits (735), Expect = 1.39e-97
Identity = 129/144 (89.58%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 11  MEALKYIAIVGVILALIDECNGQPGAEVPLSSWKINILNEMTKDSLFLHCKSKDDDLGAR 70
           MEALKYIA+VGVILALI ECNGQPGAEVPLSSWK+NILNEMTKDSLF+ CKSKDDDLGA+
Sbjct: 1   MEALKYIAVVGVILALIGECNGQPGAEVPLSSWKVNILNEMTKDSLFIRCKSKDDDLGAQ 60

Query: 71  NLGIKQQFSWIFKENLWQTTLYWCDMHNANSHASFNVFWPEKSGWLAFRCQLRNCIWSAR 130
           NLG+KQQFSW FKENLWQTTLYWC MHNA SHASFNV+WPE+SGWLAFRCQLRNCIWSAR
Sbjct: 61  NLGVKQQFSWSFKENLWQTTLYWCYMHNAKSHASFNVYWPERSGWLAFRCQLRNCIWSAR 120

Query: 131 DDGIYLKTNPHNTFELIHTWEPRM 154
           DDGIYLKTN HNT+ELIHTWEP M
Sbjct: 121 DDGIYLKTNTHNTYELIHTWEPGM 144

[Close]

BLAST of Chy4G069870 vs. NCBI nr
Match: KAE8652336.1 (hypothetical protein Csa_021865 [Cucumis sativus])

HSP 1 Score: 148 bits (373), Expect = 1.22e-42
Identity = 61/111 (54.95%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 41  SSWKINILNEMTKDSLFLHCKSKDDDLGARNLGIKQQFSWIFKENLWQTTLYWCDMHNAN 100
           S W ++I N     +L  HCKSKDDDLGA+ L +K Q+SW FKEN+WQTTL+WCD  + N
Sbjct: 20  SDWVVSIHNFQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSLN 79

Query: 101 SHASFNVFWPEKSGWLAFRCQLRNCIWSARDDGIYLKTNPHNTFELIHTWE 151
            HASF VFWPEK  WL +RC   NC W+A +DG +L   P   FE +H WE
Sbjct: 80  GHASFEVFWPEKGEWLEYRCDYGNCTWAATNDGFFLANIPERKFEFMHYWE 130

[Close]

BLAST of Chy4G069870 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-25
Identity = 48/113 (42.48%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 40  LSSWKINILNEMTK-DSLFLHCKSKDDDLGARNLGIKQQFSWIFKENLWQTTLYWCDMHN 99
           +S W++ ++N +T  ++LF+HCKSK+DDLG  NL  + +FSW F EN+  +T +WC M+ 
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 100 ANSHASFNVFWPEKSGWLAFRCQLRNCIWSARDDGIYLKTNPHNTFELIHTWE 152
            N H + NVFW +    L  RC  +NCIW+A+ DG+YL  +      L   WE
Sbjct: 98  DNGHMNVNVFWDDVI--LFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]

BLAST of Chy4G069870 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 104.4 bits (259), Expect = 8.5e-23
Identity = 44/113 (38.94%), Postives = 69/113 (61.06%), Query Frame = 0


Query: 40  LSSWKINILNEMTK-DSLFLHCKSKDDDLGARNLGIKQQFSWIFKENLWQTTLYWCDMHN 99
           +S W++ + N +T  ++LF+HCKSK++DLG  NL    +FSW F EN+  +TL+WC M  
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 100 ANSHASFNVFWPEKSGWLAFRCQLRNCIWSARDDGIYLKTNPHNTFELIHTWE 152
            + H +  VFW +    L  RC  +NC+W+A++DG+YL  +      L   W+
Sbjct: 98  DDGHMNVKVFWDDVI--LFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Chy4G069870 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12
Identity = 34/113 (30.09%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 39  PLSSWKINILNEMTKD-SLFLHCKSKDDDLGARNLGIKQQFSWIFKENLWQTTLYWCDMH 98
           P S   + I N++    +L  HCKSKDDDLG R L   + +S+ F    +  TLY+C   
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 99  NANSHASFNVFWPEKSGWLAFRCQLRNCIWSARDDGIYLKTNPHNTFELIHTW 151
             N   SF+++   +      +C+   C+W  R +G     +    F+L + W
Sbjct: 104 WPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Chy4G069870 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 69.3 bits (168), Expect = 3.0e-12
Identity = 36/111 (32.43%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 26  LIDECNGQPGAEVPLSSWKINILNEMTKDSLF-LHCKSKDDDLGARNLGIKQQFSWIFKE 85
           +I  C G   A   +   K+ + N++    L  +HC+SKDDDLG   L I Q + + F +
Sbjct: 10  VIGLCIGVSNAFHEIGESKVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGD 69

Query: 86  NLWQTTLYWCDMHNANSHASFNVFWPEKSGWLAFRCQLRNCIWSARDDGIY 136
           N+WQTT + C M    +      F   ++ W   +    +C W  R+DGIY
Sbjct: 70  NIWQTTSFSCQMDQGPNFKHHLDFVAYETSW--SKALEASCKWIGREDGIY 118

[Close]

BLAST of Chy4G069870 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-11
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 46  NILNEMTKDSLFLHCKSKDDDLGARNLGIKQQFSWIFKENLWQTTLYWCDMHNANSHASF 105
           N LN   K+ L +HCKSK++D+G + L I +  S+ FK N W TT +WC+++    +  +
Sbjct: 30  NELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRY 89

Query: 106 NVFWPEKSGWLAFRCQLRNCIWSARDDGIY 136
                 ++  L F     +  W ARDDGIY
Sbjct: 90  RGITAYQAIGL-FAKDGSSYNWLARDDGIY 118

The following BLAST results are available for this feature:

BLAST of Chy4G069870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	2.0e-24	42.48	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	1.2e-21	38.94	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F4JLQ5	3.3e-11	30.09	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9LW22	2.8e-10	36.67	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
O23020	1.2e-08	30.34	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]

BLAST of Chy4G069870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0E8	3.2e-33	44.76	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111497942 PE=3 SV=1	[more]
A0A6J1H9E9	3.2e-33	43.84	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460817 PE=3 SV=1	[more]
A0A6J1ESA0	9.2e-33	52.54	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111437334 PE=3 SV=1	[more]
A0A1S4E390	2.3e-31	45.58	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1	[more]
A0A6J5VTZ1	8.6e-31	44.76	S-protein homolog OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51617 PE=3 SV=1	[more]

BLAST of Chy4G069870 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60342.2	3.14e-103	91.56	hypothetical protein Csa_002569, partial [Cucumis sativus]	[more]
XP_004136434.3	5.90e-99	93.06	S-protein homolog 1-like [Cucumis sativus]	[more]
KAE8651384.1	7.77e-98	89.04	hypothetical protein Csa_001671 [Cucumis sativus]	[more]
XP_004136435.1	1.39e-97	89.58	S-protein homolog 1-like [Cucumis sativus]	[more]
KAE8652336.1	1.22e-42	54.95	hypothetical protein Csa_021865 [Cucumis sativus]	[more]

BLAST of Chy4G069870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	1.4e-25	42.48	S-protein homologue 1	[more]
AT4G29035.1	8.5e-23	38.94	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	2.3e-12	30.09	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	3.0e-12	32.43	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	2.0e-11	36.67	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 45..150 e-value: 1.6E-24 score: 86.4
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 15..151
None	No IPR available	PANTHER	PTHR31232:SF93	BINDING PROTEIN, PUTATIVE-RELATED	coord: 15..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G069870.1	Chy4G069870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006974	cellular response to DNA damage stimulus
cellular_component	GO:0110165	cellular anatomical entity