Chy4G068100 (gene) Cucumber (hystrix) v1

Overview
NameChy4G068100
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH04: 898058 .. 899435 (-)
RNA-Seq ExpressionChy4G068100
SyntenyChy4G068100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCATGAACTGCCTTACATGCCAAGCCCTTCCAAGAACCCAATCTGATAGGGAGAATCATGGTTATGAAACCCCCTCTACTAGAGGTAAATCATGTTGTCTATATGTTCCGCGGAGGTGGTCGACCGAGTTGACTCCTCCATTATCGTACGATTCGATCAAAATCGATGATGATGATCATATTAGCTCTTCTGATGTTCGTAAGAAGGCTAGGACTCGTCGTGTTCGTAGTGAATGCGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCAGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGGTCAAAAGAAAGGGAGATTCCATTGAGGTTCCATTTTTGTTCATTTTCCCCCCTCTCACTCATGATCTCTTTGCTTCTCTCTCTCTCTTTTTTTTTATTTTTTTAATTCTCATTTATGTGTTTGTAATTTTCTTGTGTTTATAATTCATTTTAAGTTTTAATGTAAATTGGGAAGTGAATAATAATGAATAACTTAAGGTGGGAAATGAGATTTTTATTGATGATATGATTAATTCACTCATTTGCAAACCAATATTCTTTATATAGATAGAAAATTTTGGATCTTAAGTAATTCATACAACTTTCTTTTCTGATTGATCTAATAGAATAGTCTTCCACTTCAATAATTGATATATATGTTCAAATAGTCACTTTTTTTTTTTATTTCAATTTAAATAAAATATATACAATAAAAAATAGTTTTTTTATAAGAATAATAAAAAAACAAAATATTTTCACATTTTTTAAGGGAAGATATTTTGTCAATTTTGTTCTTTTTTACAATTCCGAAAGAAATCACTCATCAACCTATCACCATTCAACGAATGTTAAACAAAAAATTAAGTTGTTTTAAAGGGAGTATGTTAGATTTTAGTGATAATGTACTAGCATTTCATGGTACTTGAATGACTAGTTGGAATTCTTACATATGTGTAGATATCTGTCTTCCTTTTCTATATTAACAAAACTAACAACTAAAATTAGTACAATGATGGTTTTTAAAGATAATCGTAGCTATGAGTAATTTTGGTTATTTAGGAGTTTAATTAATTTGAAAACTTATGAGTCTGATGTGATGATTATCTAAACGAAATTATGTTATGGAAGGAATAAATTTGTAATGTCCTAAACAGATGAGAGGTACCCGAATGAATTGCATGACTACATTCAAATGAGAAAGGTTATGAGAATATAAAAGTATGATTAAGAAAGAGATTAAAAGAATTATACTAATGGAAGTTAAAATGTTTATCAATAGTGTACTTGACTTGGAACAATCTTCCGAGAGTTAGTACATCGTGGGGTGTAGGAGAAGTGTTTGAGTCATCAAATGCATGTTAA

mRNA sequence

ATGACCATGAACTGCCTTACATGCCAAGCCCTTCCAAGAACCCAATCTGATAGGGAGAATCATGGTTATGAAACCCCCTCTACTAGAGGTAAATCATGTTGTCTATATGTTCCGCGGAGGTGGTCGACCGAGTTGACTCCTCCATTATCGTACGATTCGATCAAAATCGATGATGATGATCATATTAGCTCTTCTGATGTTCGTAAGAAGGCTAGGACTCGTCGTGTTCGTAGTGAATGCGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCAGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGTGTACTTGACTTGGAACAATCTTCCGAGAGTTAGTACATCGTGGGGTGTAGGAGAAGTGTTTGAGTCATCAAATGCATGTTAA

Coding sequence (CDS)

ATGACCATGAACTGCCTTACATGCCAAGCCCTTCCAAGAACCCAATCTGATAGGGAGAATCATGGTTATGAAACCCCCTCTACTAGAGGTAAATCATGTTGTCTATATGTTCCGCGGAGGTGGTCGACCGAGTTGACTCCTCCATTATCGTACGATTCGATCAAAATCGATGATGATGATCATATTAGCTCTTCTGATGTTCGTAAGAAGGCTAGGACTCGTCGTGTTCGTAGTGAATGCGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCAGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGTGTACTTGACTTGGAACAATCTTCCGAGAGTTAGTACATCGTGGGGTGTAGGAGAAGTGTTTGAGTCATCAAATGCATGTTAA

Protein sequence

MTMNCLTCQALPRTQSDRENHGYETPSTRGKSCCLYVPRRWSTELTPPLSYDSIKIDDDDHISSSDVRKKARTRRVRSECGGNEPRLVRSSGMRRDWSFEDLGLRVYLTWNNLPRVSTSWGVGEVFESSNAC*
Homology
BLAST of Chy4G068100 vs. ExPASy TrEMBL
Match: A0A0A0LEC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902280 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 4.2e-50
Identity = 98/105 (93.33%), Postives = 100/105 (95.24%), Query Frame = 0

Query: 1   MTMNCLTCQALPRTQSDRENHGYETPSTRGKSCCLYVPRRWSTELTPPLSYDSIKIDDDD 60
           MTMNCLTCQALPRTQSDREN GYETPSTRGKSCCLYVPRRWSTELT P SYDSIKIDDD 
Sbjct: 1   MTMNCLTCQALPRTQSDRENRGYETPSTRGKSCCLYVPRRWSTELTTPSSYDSIKIDDDH 60

Query: 61  HISSSDVRKKARTRRVRSECGGNEPRLVRSSGMRRDWSFEDLGLR 106
           HISSS+V KKARTRRVRSECGGNEP+LVRSSGMRRDWSFEDLGLR
Sbjct: 61  HISSSNVHKKARTRRVRSECGGNEPKLVRSSGMRRDWSFEDLGLR 105

BLAST of Chy4G068100 vs. ExPASy TrEMBL
Match: A0A5A7T546 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001040 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.7e-38
Identity = 86/107 (80.37%), Postives = 94/107 (87.85%), Query Frame = 0

Query: 1   MTMNCLTCQALPRTQSDRE-NHGYETPSTRGKSCCLYVPRRWSTELTPPLSYDSIKIDDD 60
           MTMNCLTCQALPRTQSDRE NHGYETPS+RGKSCCLYVPRRWS ELTP   ++ IK+D+D
Sbjct: 1   MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP---HNPIKLDED 60

Query: 61  DHISSSDVRKKARTRRVRS-ECGGNEPRLVRSSGMRRDWSFEDLGLR 106
             ISSSD+ KK R+RR RS + GGNEPRLVRSSGMRRDWSFEDLGLR
Sbjct: 61  --ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLR 102

BLAST of Chy4G068100 vs. ExPASy TrEMBL
Match: A0A5D3E5T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004480 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.3e-37
Identity = 84/105 (80.00%), Postives = 92/105 (87.62%), Query Frame = 0

Query: 3   MNCLTCQALPRTQSDRE-NHGYETPSTRGKSCCLYVPRRWSTELTPPLSYDSIKIDDDDH 62
           MNCLTCQALPRTQSDRE NHGYETPS+RGKSCCLYVPRRWS ELTP   ++ IK+D+D  
Sbjct: 1   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP---HNPIKLDED-- 60

Query: 63  ISSSDVRKKARTRRVRS-ECGGNEPRLVRSSGMRRDWSFEDLGLR 106
           ISSSD+ KK R+RR RS + GGNEPRLVRSSGMRRDWSFEDLGLR
Sbjct: 61  ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLR 100

BLAST of Chy4G068100 vs. ExPASy TrEMBL
Match: A0A1S3CRL3 (uncharacterized protein LOC103503546 OS=Cucumis melo OX=3656 GN=LOC103503546 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.3e-37
Identity = 84/105 (80.00%), Postives = 92/105 (87.62%), Query Frame = 0

Query: 3   MNCLTCQALPRTQSDRE-NHGYETPSTRGKSCCLYVPRRWSTELTPPLSYDSIKIDDDDH 62
           MNCLTCQALPRTQSDRE NHGYETPS+RGKSCCLYVPRRWS ELTP   ++ IK+D+D  
Sbjct: 1   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP---HNPIKLDED-- 60

Query: 63  ISSSDVRKKARTRRVRS-ECGGNEPRLVRSSGMRRDWSFEDLGLR 106
           ISSSD+ KK R+RR RS + GGNEPRLVRSSGMRRDWSFEDLGLR
Sbjct: 61  ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLR 100

BLAST of Chy4G068100 vs. ExPASy TrEMBL
Match: A0A6J1DZN2 (uncharacterized protein LOC111026067 OS=Momordica charantia OX=3673 GN=LOC111026067 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.5e-23
Identity = 72/120 (60.00%), Postives = 79/120 (65.83%), Query Frame = 0

Query: 1   MTMNCLTCQALPRTQSDREN-----HGYETPST--RGKSCCLYVPRRWSTELTPPLSYDS 60
           M+MNCLTCQALPRTQSDREN     + YET S+  RGKSCCL+V RRWS ELT P SY  
Sbjct: 1   MSMNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELT-PTSYGH 60

Query: 61  IKIDDDDHISSSDVR-----KKARTRRVRSECGG---NEPRLVRSSGMRRDWSFEDLGLR 106
           IK   D+       R     KK + R +RS       NEPRLVRSSGMRRDWSFEDL LR
Sbjct: 61  IKTTADNAREGCSSRKSFSDKKVKDRYLRSGSMNEKENEPRLVRSSGMRRDWSFEDLRLR 119

BLAST of Chy4G068100 vs. NCBI nr
Match: KGN60385.1 (hypothetical protein Csa_002007 [Cucumis sativus])

HSP 1 Score: 206 bits (525), Expect = 2.14e-66
Identity = 98/105 (93.33%), Postives = 100/105 (95.24%), Query Frame = 0

Query: 1   MTMNCLTCQALPRTQSDRENHGYETPSTRGKSCCLYVPRRWSTELTPPLSYDSIKIDDDD 60
           MTMNCLTCQALPRTQSDREN GYETPSTRGKSCCLYVPRRWSTELT P SYDSIKIDDD 
Sbjct: 1   MTMNCLTCQALPRTQSDRENRGYETPSTRGKSCCLYVPRRWSTELTTPSSYDSIKIDDDH 60

Query: 61  HISSSDVRKKARTRRVRSECGGNEPRLVRSSGMRRDWSFEDLGLR 105
           HISSS+V KKARTRRVRSECGGNEP+LVRSSGMRRDWSFEDLGLR
Sbjct: 61  HISSSNVHKKARTRRVRSECGGNEPKLVRSSGMRRDWSFEDLGLR 105

BLAST of Chy4G068100 vs. NCBI nr
Match: XP_031737602.1 (uncharacterized protein LOC116402474 [Cucumis sativus])

HSP 1 Score: 202 bits (515), Expect = 6.72e-65
Identity = 96/103 (93.20%), Postives = 98/103 (95.15%), Query Frame = 0

Query: 3   MNCLTCQALPRTQSDRENHGYETPSTRGKSCCLYVPRRWSTELTPPLSYDSIKIDDDDHI 62
           MNCLTCQALPRTQSDREN GYETPSTRGKSCCLYVPRRWSTELT P SYDSIKIDDD HI
Sbjct: 1   MNCLTCQALPRTQSDRENRGYETPSTRGKSCCLYVPRRWSTELTTPSSYDSIKIDDDHHI 60

Query: 63  SSSDVRKKARTRRVRSECGGNEPRLVRSSGMRRDWSFEDLGLR 105
           SSS+V KKARTRRVRSECGGNEP+LVRSSGMRRDWSFEDLGLR
Sbjct: 61  SSSNVHKKARTRRVRSECGGNEPKLVRSSGMRRDWSFEDLGLR 103

BLAST of Chy4G068100 vs. NCBI nr
Match: XP_038887010.1 (uncharacterized protein LOC120077178 [Benincasa hispida])

HSP 1 Score: 172 bits (437), Expect = 4.87e-53
Identity = 87/105 (82.86%), Postives = 94/105 (89.52%), Query Frame = 0

Query: 1   MTMNCLTCQALPRTQSDRENHGYETPSTRGKSCCLYVPRRWSTELTPPLSYDSIKIDDDD 60
           M+MNCLTCQALPRTQSDRENHGYET S+RGKSCCLYV RRWS ELTPP SY+SIK DDD 
Sbjct: 1   MSMNCLTCQALPRTQSDRENHGYETSSSRGKSCCLYVSRRWSAELTPP-SYESIKNDDD- 60

Query: 61  HISSSDVRKKARTRRVRSECGGNEPRLVRSSGMRRDWSFEDLGLR 105
            ISSS ++KKA+ RRV S+CG NEPRLVRSSGMRRDWSFEDLGLR
Sbjct: 61  -ISSS-LQKKAKNRRVHSDCGRNEPRLVRSSGMRRDWSFEDLGLR 101

BLAST of Chy4G068100 vs. NCBI nr
Match: KAA0038574.1 (uncharacterized protein E6C27_scaffold92G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 167 bits (423), Expect = 7.04e-51
Identity = 86/107 (80.37%), Postives = 94/107 (87.85%), Query Frame = 0

Query: 1   MTMNCLTCQALPRTQSDREN-HGYETPSTRGKSCCLYVPRRWSTELTPPLSYDSIKIDDD 60
           MTMNCLTCQALPRTQSDREN HGYETPS+RGKSCCLYVPRRWS ELTP   ++ IK+D+D
Sbjct: 1   MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP---HNPIKLDED 60

Query: 61  DHISSSDVRKKARTRRVRS-ECGGNEPRLVRSSGMRRDWSFEDLGLR 105
             ISSSD+ KK R+RR RS + GGNEPRLVRSSGMRRDWSFEDLGLR
Sbjct: 61  --ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLR 102

BLAST of Chy4G068100 vs. NCBI nr
Match: XP_008465978.2 (PREDICTED: uncharacterized protein LOC103503546 [Cucumis melo] >TYK31168.1 uncharacterized protein E5676_scaffold455G004480 [Cucumis melo var. makuwa])

HSP 1 Score: 163 bits (413), Expect = 2.21e-49
Identity = 84/105 (80.00%), Postives = 92/105 (87.62%), Query Frame = 0

Query: 3   MNCLTCQALPRTQSDREN-HGYETPSTRGKSCCLYVPRRWSTELTPPLSYDSIKIDDDDH 62
           MNCLTCQALPRTQSDREN HGYETPS+RGKSCCLYVPRRWS ELTP   ++ IK+D+D  
Sbjct: 1   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP---HNPIKLDED-- 60

Query: 63  ISSSDVRKKARTRRVRS-ECGGNEPRLVRSSGMRRDWSFEDLGLR 105
           ISSSD+ KK R+RR RS + GGNEPRLVRSSGMRRDWSFEDLGLR
Sbjct: 61  ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLR 100

BLAST of Chy4G068100 vs. TAIR 10
Match: AT5G46770.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 9.3e-10
Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = 0

Query: 1   MTMNCLTCQALPRTQSDRE-------NHGYETPSTRGKSCCL--YVPRRWSTELTPPLSY 60
           M++NCL+CQALPRT S+++           E  +  GK+CC+     R WS  L+P + Y
Sbjct: 1   MSLNCLSCQALPRTDSNKDVDLSGPGPPRVEINNVLGKTCCVNPIGGRNWSGNLSPRI-Y 60

Query: 61  DSIKIDDDDHISSSDVRKKARTRRVRSECGGN---------EPRLVRSSGMRRDWSFEDL 103
           + I              KK    R+    G +         +P+LVRS+G+RR+WSFE+L
Sbjct: 61  EKIGRPGSSLAHKMKKVKKIHHVRLSGPVGSSPSNVPTRPEQPKLVRSTGVRRNWSFENL 119

BLAST of Chy4G068100 vs. TAIR 10
Match: AT2G35215.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46770.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 4.8e-06
Identity = 33/102 (32.35%), Postives = 49/102 (48.04%), Query Frame = 0

Query: 1   MTMNCLTCQALPRTQSDRENHGYETPSTRGKSCCLYVPRRWSTELTPPLSYDSIKIDDDD 60
           M++NCL C  L RT SDR+    +  S +           ++T     +  +   +    
Sbjct: 1   MSLNCLACHILQRTDSDRDMGSRKDSSFK---------ENFATSAFEKMVRNRSSLPVVR 60

Query: 61  HISSSDVRKKARTRRVRSECGGNEPRLVRSSGMRRDWSFEDL 103
            ++    R  +    V  E   +EP+LVRSSG+RRDWSFEDL
Sbjct: 61  RVNKGHRRLYSADIMVYGEL--DEPKLVRSSGIRRDWSFEDL 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LEC04.2e-5093.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902280 PE=4 SV=1[more]
A0A5A7T5463.7e-3880.37Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3E5T45.3e-3780.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CRL35.3e-3780.00uncharacterized protein LOC103503546 OS=Cucumis melo OX=3656 GN=LOC103503546 PE=... [more]
A0A6J1DZN21.5e-2360.00uncharacterized protein LOC111026067 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
Match NameE-valueIdentityDescription
KGN60385.12.14e-6693.33hypothetical protein Csa_002007 [Cucumis sativus][more]
XP_031737602.16.72e-6593.20uncharacterized protein LOC116402474 [Cucumis sativus][more]
XP_038887010.14.87e-5382.86uncharacterized protein LOC120077178 [Benincasa hispida][more]
KAA0038574.17.04e-5180.37uncharacterized protein E6C27_scaffold92G001040 [Cucumis melo var. makuwa][more]
XP_008465978.22.21e-4980.00PREDICTED: uncharacterized protein LOC103503546 [Cucumis melo] >TYK31168.1 uncha... [more]
Match NameE-valueIdentityDescription
AT5G46770.19.3e-1034.17unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
AT2G35215.14.8e-0632.35unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..85
NoneNo IPR availablePANTHERPTHR36019PLANT/PROTEINcoord: 1..102

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G068100.1Chy4G068100.1mRNA