Chy4G068100 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCATGAACTGCCTTACATGCCAAGCCCTTCCAAGAACCCAATCTGATAGGGAGAATCATGGTTATGAAACCCCCTCTACTAGAGGTAAATCATGTTGTCTATATGTTCCGCGGAGGTGGTCGACCGAGTTGACTCCTCCATTATCGTACGATTCGATCAAAATCGATGATGATGATCATATTAGCTCTTCTGATGTTCGTAAGAAGGCTAGGACTCGTCGTGTTCGTAGTGAATGCGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCAGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGGTCAAAAGAAAGGGAGATTCCATTGAGGTTCCATTTTTGTTCATTTTCCCCCCTCTCACTCATGATCTCTTTGCTTCTCTCTCTCTCTTTTTTTTTATTTTTTTAATTCTCATTTATGTGTTTGTAATTTTCTTGTGTTTATAATTCATTTTAAGTTTTAATGTAAATTGGGAAGTGAATAATAATGAATAACTTAAGGTGGGAAATGAGATTTTTATTGATGATATGATTAATTCACTCATTTGCAAACCAATATTCTTTATATAGATAGAAAATTTTGGATCTTAAGTAATTCATACAACTTTCTTTTCTGATTGATCTAATAGAATAGTCTTCCACTTCAATAATTGATATATATGTTCAAATAGTCACTTTTTTTTTTTATTTCAATTTAAATAAAATATATACAATAAAAAATAGTTTTTTTATAAGAATAATAAAAAAACAAAATATTTTCACATTTTTTAAGGGAAGATATTTTGTCAATTTTGTTCTTTTTTACAATTCCGAAAGAAATCACTCATCAACCTATCACCATTCAACGAATGTTAAACAAAAAATTAAGTTGTTTTAAAGGGAGTATGTTAGATTTTAGTGATAATGTACTAGCATTTCATGGTACTTGAATGACTAGTTGGAATTCTTACATATGTGTAGATATCTGTCTTCCTTTTCTATATTAACAAAACTAACAACTAAAATTAGTACAATGATGGTTTTTAAAGATAATCGTAGCTATGAGTAATTTTGGTTATTTAGGAGTTTAATTAATTTGAAAACTTATGAGTCTGATGTGATGATTATCTAAACGAAATTATGTTATGGAAGGAATAAATTTGTAATGTCCTAAACAGATGAGAGGTACCCGAATGAATTGCATGACTACATTCAAATGAGAAAGGTTATGAGAATATAAAAGTATGATTAAGAAAGAGATTAAAAGAATTATACTAATGGAAGTTAAAATGTTTATCAATAGTGTACTTGACTTGGAACAATCTTCCGAGAGTTAGTACATCGTGGGGTGTAGGAGAAGTGTTTGAGTCATCAAATGCATGTTAA ATGACCATGAACTGCCTTACATGCCAAGCCCTTCCAAGAACCCAATCTGATAGGGAGAATCATGGTTATGAAACCCCCTCTACTAGAGGTAAATCATGTTGTCTATATGTTCCGCGGAGGTGGTCGACCGAGTTGACTCCTCCATTATCGTACGATTCGATCAAAATCGATGATGATGATCATATTAGCTCTTCTGATGTTCGTAAGAAGGCTAGGACTCGTCGTGTTCGTAGTGAATGCGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCAGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGTGTACTTGACTTGGAACAATCTTCCGAGAGTTAGTACATCGTGGGGTGTAGGAGAAGTGTTTGAGTCATCAAATGCATGTTAA ATGACCATGAACTGCCTTACATGCCAAGCCCTTCCAAGAACCCAATCTGATAGGGAGAATCATGGTTATGAAACCCCCTCTACTAGAGGTAAATCATGTTGTCTATATGTTCCGCGGAGGTGGTCGACCGAGTTGACTCCTCCATTATCGTACGATTCGATCAAAATCGATGATGATGATCATATTAGCTCTTCTGATGTTCGTAAGAAGGCTAGGACTCGTCGTGTTCGTAGTGAATGCGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCAGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGTGTACTTGACTTGGAACAATCTTCCGAGAGTTAGTACATCGTGGGGTGTAGGAGAAGTGTTTGAGTCATCAAATGCATGTTAA MTMNCLTCQALPRTQSDRENHGYETPSTRGKSCCLYVPRRWSTELTPPLSYDSIKIDDDDHISSSDVRKKARTRRVRSECGGNEPRLVRSSGMRRDWSFEDLGLRVYLTWNNLPRVSTSWGVGEVFESSNAC* Homology
BLAST of Chy4G068100 vs. ExPASy TrEMBL
Match: A0A0A0LEC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902280 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 4.2e-50 Identity = 98/105 (93.33%), Postives = 100/105 (95.24%), Query Frame = 0
BLAST of Chy4G068100 vs. ExPASy TrEMBL
Match: A0A5A7T546 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001040 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 3.7e-38 Identity = 86/107 (80.37%), Postives = 94/107 (87.85%), Query Frame = 0
BLAST of Chy4G068100 vs. ExPASy TrEMBL
Match: A0A5D3E5T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004480 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 5.3e-37 Identity = 84/105 (80.00%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Chy4G068100 vs. ExPASy TrEMBL
Match: A0A1S3CRL3 (uncharacterized protein LOC103503546 OS=Cucumis melo OX=3656 GN=LOC103503546 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 5.3e-37 Identity = 84/105 (80.00%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Chy4G068100 vs. ExPASy TrEMBL
Match: A0A6J1DZN2 (uncharacterized protein LOC111026067 OS=Momordica charantia OX=3673 GN=LOC111026067 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.5e-23 Identity = 72/120 (60.00%), Postives = 79/120 (65.83%), Query Frame = 0
BLAST of Chy4G068100 vs. NCBI nr
Match: KGN60385.1 (hypothetical protein Csa_002007 [Cucumis sativus]) HSP 1 Score: 206 bits (525), Expect = 2.14e-66 Identity = 98/105 (93.33%), Postives = 100/105 (95.24%), Query Frame = 0
BLAST of Chy4G068100 vs. NCBI nr
Match: XP_031737602.1 (uncharacterized protein LOC116402474 [Cucumis sativus]) HSP 1 Score: 202 bits (515), Expect = 6.72e-65 Identity = 96/103 (93.20%), Postives = 98/103 (95.15%), Query Frame = 0
BLAST of Chy4G068100 vs. NCBI nr
Match: XP_038887010.1 (uncharacterized protein LOC120077178 [Benincasa hispida]) HSP 1 Score: 172 bits (437), Expect = 4.87e-53 Identity = 87/105 (82.86%), Postives = 94/105 (89.52%), Query Frame = 0
BLAST of Chy4G068100 vs. NCBI nr
Match: KAA0038574.1 (uncharacterized protein E6C27_scaffold92G001040 [Cucumis melo var. makuwa]) HSP 1 Score: 167 bits (423), Expect = 7.04e-51 Identity = 86/107 (80.37%), Postives = 94/107 (87.85%), Query Frame = 0
BLAST of Chy4G068100 vs. NCBI nr
Match: XP_008465978.2 (PREDICTED: uncharacterized protein LOC103503546 [Cucumis melo] >TYK31168.1 uncharacterized protein E5676_scaffold455G004480 [Cucumis melo var. makuwa]) HSP 1 Score: 163 bits (413), Expect = 2.21e-49 Identity = 84/105 (80.00%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Chy4G068100 vs. TAIR 10
Match: AT5G46770.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 9.3e-10 Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = 0
BLAST of Chy4G068100 vs. TAIR 10
Match: AT2G35215.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46770.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 4.8e-06 Identity = 33/102 (32.35%), Postives = 49/102 (48.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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