Chy4G067710 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G067710
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Allyl alcohol dehydrogenase-like protein
Location	chrH04: 572013 .. 574507 (+)
RNA-Seq Expression	Chy4G067710
Synteny	Chy4G067710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTTCTCTCCTGGTGGAAAGGCCAATCTCCGCCATCAGACTCCACTTCCAAGCCCCCGCAGCCTCCTCCCAAGAACCTCTCTCAGCCTGCCGAAGTCCCCGGTCTCAATGGCGCCCTCCAAGTCCCCCGACCAGATGCCTCTGTCACCATCTTCGAGTTCGGCTCCGTCTCCTCTTCCTCCGATAAGGTCACTCTCACCGGTTACTGCCCTGTCTCAGACGAATTCGAGCCCTGCCGCTGGGAGATTCTGCCGGCAAGCGACTCCAATGCGCCTCTTTTTCGTGTTGTCTTCTGAGGATGCTTGAGAATGTAAGTTAAATTCAAAGTTTATAAACGATTATTCTAGCAGAGAGAGCTTTGTGAATTACGACCTCGTTGAGGAGACTTTGGATTTTCCTTTCGCATATAATTGACTTTTCTTTTTTACTTGTCTTCTGGTTTTTTTTTAAAAATATTCTTGCTTCTTTCTCTTTCTTCGTGGATTCCTTTCCCATTTTCTGCTGTTCACAATTTGATATCGTCTTTTTTATCATTGAAAAAGAAATCTACTGCATTTGCGTTTGCATTCGCATATCTGTTGGTAGTAGAAATTGGGGCAACTGAGTATTTATCCTCATTTCTTAATTTAGGGCAGGTTTAGAGTTCAAGCATGCTTGGGTAAATTATTTTGCAATAGTTAATGGTTAAAATAACTTGTCAGTAAAACATGTTTTCAATCCTTCCAAACCAATTGGGATGATATGAAAACTACATATATGTAAAACTTTGAGTGATTAAAAGTACTGAAAAAAAAAGTGATTTTAACAAGTACCCATGATTCTAGTGTATGCTTGGTTATGTAATGGTGTATAAGAGATTGAAAGCTTCTTGTTTGTGAAAACCAATTTTTCCTTTGCTCAATGAAATCTTGCTTTTCTATTCTGTGAGAAAGAACCCTCTAAGCCATGATTCTGACCCGACTTCGAAATTTAGATTTATCAATTGATGTTTCTGCCATCTTACAAAACATGTATTCTCGCCGAGCTACCTACTTGTTTTAATCAACAGCGAATAAGATTCTTACAAACTACCATCTTACCATCTTTTGTTAAGTGGTCGATAGGAAAGTATCAGTTATTGATTCTTTTAATCATTTATGTTTCTATACATATATTTGGATGTAGTCTCGATTCATTAACACTTTCGTTCTCTAATTTGTTGGCGTTGCATGGACTGACTATTAATGTCTCATCTATTAGGTGATCAGACACTAACACCCAATAGGTTTTTCCCTTTCTTATTAGCTTAGGGTGGCTACGGACAAAATATAACTCTAACTCAGTACCCAGAAGTTCAAGTTAATGGGTAAAAAGATAAATTTGATATTATATTATTTAACCCATCTTTCCACTTATAGAGTTGAAATATAGGAGCAGAGGTAGTTTATGTAATTTGAGTTGTAAAATCAAACCATTTATTAACTTCAAAATAATGTCATTTTTTTTTTCTTGTAACAACCCTTGATTCTAAAGCAATATGACATTTTGAATTTTCTGCATATTTATTAACACCTTTTTCTCTGAAAAAAGATTAAGCACAATCACGTTATGCAAAAATAAAAATTGGTTCATAACACATACTTTGATTTAGGATAGAATCAAATTAAAATTTGAATATAAATTTATAAATTTTCTTTAGCTGCTTGTGATGATGAATGGTCTTTTGTTAGTTTTGTGTGAAGTTACCCAACTGTCTATACACAAGTGTGTTCAGCAGTCAGCAAGCAACTCGTATCTCATCTCGATTTCCATTTTTTTTTGGAGTATCGTCTCTTGATCTTGGTCAATGTAATACATCTACGGTCCTCAATTAAGTTTCTCGATCTTGATCCTCGATGCTCAGCTTGCTGTCAACTAACAGTTTCGTAAAATTGGTCTGGTCTGAAAGATACACTTCCTCAGTTTTCAATTCTAATGTGAACTAAAAATACTTATCTTCTATCTTCAACATTAACATGAAAAAGAGAATTTAATAAATGAAATGGACAATTTAACGATGTGTTTGGATTACATTTTCAAGTGTTTAATTTTAAAAATGAGTTATTTTAAAGAAAAAAAAAAGAATTTTTAAAAATAGTAAATTTTACAAACTATTTACAACCTATAACAAATTATCACTCTAAAATTTTGCTATTAAATTGTAAATATTTCAAAAAAAAAGTTAAGTCATTCAAAATAAATGGTTAAATATATTTGAAATATATTTTTTTAAAATTAAACCAAAATGAATTTCTGCAAAAACATTTTATGAAAATCTAACAAATAAACATTAAATCACGAAACTTAGAGATTAAACTCCGTAGTTTTCTCAATACACTTTTGCGGCACTCTTAAAAGAAAATCACATATAACCATTTGAAAACCAAAAGCAAAGGAAAAAGCAAGGGAAAAAGCAAGGAAAGAAGGTTGCTGCTGGCGAGAGAAGGCAGGCCTGAAGAACTATCTACGCTGA

mRNA sequence

ATGGGTCTTCTCTCCTGGTGGAAAGGCCAATCTCCGCCATCAGACTCCACTTCCAAGCCCCCGCAGCCTCCTCCCAAGAACCTCTCTCAGCCTGCCGAAGTCCCCGGTCTCAATGGCGCCCTCCAAGTCCCCCGACCAGATGCCTCTGTCACCATCTTCGAGTTCGGCTCCGTCTCCTCTTCCTCCGATAAGGTCACTCTCACCGGTTACTGCCCTGTCTCAGACGAATTCGAGCCCTGCCGCTGGGAGATTCTGCCGGCAAGCGACTCCAATGCGCCTCTTTTTCGTGAAAAAGCAAGGGAAAAAGCAAGGAAAGAAGGTTGCTGCTGGCGAGAGAAGGCAGGCCTGAAGAACTATCTACGCTGA

Coding sequence (CDS)

ATGGGTCTTCTCTCCTGGTGGAAAGGCCAATCTCCGCCATCAGACTCCACTTCCAAGCCCCCGCAGCCTCCTCCCAAGAACCTCTCTCAGCCTGCCGAAGTCCCCGGTCTCAATGGCGCCCTCCAAGTCCCCCGACCAGATGCCTCTGTCACCATCTTCGAGTTCGGCTCCGTCTCCTCTTCCTCCGATAAGGTCACTCTCACCGGTTACTGCCCTGTCTCAGACGAATTCGAGCCCTGCCGCTGGGAGATTCTGCCGGCAAGCGACTCCAATGCGCCTCTTTTTCGTGAAAAAGCAAGGGAAAAAGCAAGGAAAGAAGGTTGCTGCTGGCGAGAGAAGGCAGGCCTGAAGAACTATCTACGCTGA

Protein sequence

MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRPDASVTIFEFGSVSSSSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFREKAREKARKEGCCWREKAGLKNYLR*

Homology

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BLAST of Chy4G067710 vs. ExPASy TrEMBL
Match: A0A0A0LF75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910650 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.8e-47
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRPDASVTIFEFGSVSS 60
          MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPR D SVTIFEFGSVSS
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS 60

Query: 61 SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR 97
          SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR
Sbjct: 61 SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR 96

[Close]

BLAST of Chy4G067710 vs. ExPASy TrEMBL
Match: A0A5D3E692 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004090 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.7e-43
Identity = 85/96 (88.54%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRPDASVTIFEFGSVSS 60
          MGLLSWWKGQSPPSDSTSKPPQPP KNLSQPAEVPGLNGAL+VPRP ASVT+FEFGSV++
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLNGALEVPRPAASVTVFEFGSVTA 60

Query: 61 SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR 97
          SSDKVTL GYCPVSD+FEPCRWEI+PAS S+APLFR
Sbjct: 61 SSDKVTLAGYCPVSDDFEPCRWEIMPASGSDAPLFR 96

[Close]

BLAST of Chy4G067710 vs. ExPASy TrEMBL
Match: A0A1S3CQC7 (uncharacterized protein LOC103503504 OS=Cucumis melo OX=3656 GN=LOC103503504 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.7e-43
Identity = 85/96 (88.54%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRPDASVTIFEFGSVSS 60
          MGLLSWWKGQSPPSDSTSKPPQPP KNLSQPAEVPGLNGAL+VPRP ASVT+FEFGSV++
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLNGALEVPRPAASVTVFEFGSVTA 60

Query: 61 SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR 97
          SSDKVTL GYCPVSD+FEPCRWEI+PAS S+APLFR
Sbjct: 61 SSDKVTLAGYCPVSDDFEPCRWEIMPASGSDAPLFR 96

[Close]

BLAST of Chy4G067710 vs. ExPASy TrEMBL
Match: A0A6J1GLN4 (uncharacterized protein LOC111455443 OS=Cucurbita moschata OX=3662 GN=LOC111455443 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 9.8e-38
Identity = 79/96 (82.29%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 1  MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRPDASVTIFEFGSVSS 60
          MGLLSWWKG S PS+S SK PQPPPKN+SQPAEVPGLNGA++VPRP A+VT+FEFGSVS+
Sbjct: 1  MGLLSWWKGGSAPSESNSK-PQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSA 60

Query: 61 SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR 97
          SSD VTLTGYCPVSD+ EPCRWEILPAS S+APLFR
Sbjct: 61 SSDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFR 95

[Close]

BLAST of Chy4G067710 vs. ExPASy TrEMBL
Match: A0A6J1I4S4 (uncharacterized protein LOC111470658 OS=Cucurbita maxima OX=3661 GN=LOC111470658 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 8.3e-37
Identity = 78/96 (81.25%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRPDASVTIFEFGSVSS 60
          MGLLSWWKG S PS+S SK  QPPPKN+SQPAEVPGLNGA++VPRP A+VT+FEFGSVS+
Sbjct: 1  MGLLSWWKGGSAPSESNSK-SQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSA 60

Query: 61 SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR 97
          SSD VTLTGYCPVSD+ EPCRWEILPAS S+APLFR
Sbjct: 61 SSDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFR 95

[Close]

BLAST of Chy4G067710 vs. NCBI nr
Match: XP_011652671.1 (uncharacterized protein LOC101203507 [Cucumis sativus] >KGN60428.1 hypothetical protein Csa_001035 [Cucumis sativus])

HSP 1 Score: 196 bits (499), Expect = 8.11e-63
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRPDASVTIFEFGSVSS 60
          MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPR D SVTIFEFGSVSS
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRLDTSVTIFEFGSVSS 60

Query: 61 SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR 96
          SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR
Sbjct: 61 SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR 96

[Close]

BLAST of Chy4G067710 vs. NCBI nr
Match: XP_008465928.1 (PREDICTED: uncharacterized protein LOC103503504 [Cucumis melo] >KAA0038533.1 uncharacterized protein E6C27_scaffold92G00590 [Cucumis melo var. makuwa] >TYK31130.1 uncharacterized protein E5676_scaffold455G004090 [Cucumis melo var. makuwa])

HSP 1 Score: 183 bits (465), Expect = 1.24e-57
Identity = 85/96 (88.54%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRPDASVTIFEFGSVSS 60
          MGLLSWWKGQSPPSDSTSKPPQPP KNLSQPAEVPGLNGAL+VPRP ASVT+FEFGSV++
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLNGALEVPRPAASVTVFEFGSVTA 60

Query: 61 SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR 96
          SSDKVTL GYCPVSD+FEPCRWEI+PAS S+APLFR
Sbjct: 61 SSDKVTLAGYCPVSDDFEPCRWEIMPASGSDAPLFR 96

[Close]

BLAST of Chy4G067710 vs. NCBI nr
Match: XP_038886991.1 (uncharacterized protein LOC120077159 [Benincasa hispida] >XP_038886992.1 uncharacterized protein LOC120077159 [Benincasa hispida])

HSP 1 Score: 172 bits (436), Expect = 3.17e-53
Identity = 82/96 (85.42%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 1  MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRPDASVTIFEFGSVSS 60
          MGLLSWWKGQSPPSDS SKPP PP KN+SQPAEVPGLNGA++VPRP A+VT+FEFGSVSS
Sbjct: 1  MGLLSWWKGQSPPSDSNSKPP-PPQKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSS 60

Query: 61 SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR 96
          SSDKVTL GYCPVSD+ EPCRWEILPAS S+APLFR
Sbjct: 61 SSDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFR 95

[Close]

BLAST of Chy4G067710 vs. NCBI nr
Match: XP_022952897.1 (uncharacterized protein LOC111455443 [Cucurbita moschata] >KAG7011515.1 hypothetical protein SDJN02_26421, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166 bits (421), Expect = 6.14e-51
Identity = 79/96 (82.29%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 1  MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRPDASVTIFEFGSVSS 60
          MGLLSWWKG S PS+S SKP QPPPKN+SQPAEVPGLNGA++VPRP A+VT+FEFGSVS+
Sbjct: 1  MGLLSWWKGGSAPSESNSKP-QPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSA 60

Query: 61 SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR 96
          SSD VTLTGYCPVSD+ EPCRWEILPAS S+APLFR
Sbjct: 61 SSDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFR 95

[Close]

BLAST of Chy4G067710 vs. NCBI nr
Match: XP_023554244.1 (uncharacterized protein LOC111811567 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164 bits (416), Expect = 3.55e-50
Identity = 78/96 (81.25%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLNGALQVPRPDASVTIFEFGSVSS 60
          MGLLSWWKG S PS+S SKP QPPPKN+SQP EVPGLNGA++VPRP A+VT+FEFGSVS+
Sbjct: 1  MGLLSWWKGGSAPSESNSKP-QPPPKNVSQPPEVPGLNGAVEVPRPAATVTVFEFGSVSA 60

Query: 61 SSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR 96
          SSD VTLTGYCPVSD+ EPCRWEILPAS S+APLFR
Sbjct: 61 SSDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFR 95

[Close]

BLAST of Chy4G067710 vs. TAIR 10
Match: AT3G59840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 111.7 bits (278), Expect = 4.2e-25
Identity = 57/97 (58.76%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 1  MGLLSWWKGQSPPSDS-TSKPPQPPPKNLSQPAEVPGLNGALQVPRPDASVTIFEFGSVS 60
          MG+LSW+ G   PS S TSKP          PA  PG+NGA++VPRPD + T+FEFGSV+
Sbjct: 1  MGILSWFTGSPKPSQSETSKPEMIQMPKSETPA--PGMNGAIEVPRPDRA-TVFEFGSVA 60

Query: 61 SSSDKVTLTGYCPVSDEFEPCRWEILPASDSNAPLFR 97
          ++ D+VTL GYCPVSD+ EPCRWEILPA   +AP FR
Sbjct: 61 ATGDRVTLAGYCPVSDDLEPCRWEILPADGKDAPQFR 94

The following BLAST results are available for this feature:

BLAST of Chy4G067710 vs.


Match Name	E-value	Identity	Description

BLAST of Chy4G067710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF75	8.8e-47	97.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910650 PE=4 SV=1	[more]
A0A5D3E692	7.7e-43	88.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CQC7	7.7e-43	88.54	uncharacterized protein LOC103503504 OS=Cucumis melo OX=3656 GN=LOC103503504 PE=...	[more]
A0A6J1GLN4	9.8e-38	82.29	uncharacterized protein LOC111455443 OS=Cucurbita moschata OX=3662 GN=LOC1114554...	[more]
A0A6J1I4S4	8.3e-37	81.25	uncharacterized protein LOC111470658 OS=Cucurbita maxima OX=3661 GN=LOC111470658...	[more]

BLAST of Chy4G067710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652671.1	8.11e-63	97.92	uncharacterized protein LOC101203507 [Cucumis sativus] >KGN60428.1 hypothetical ...	[more]
XP_008465928.1	1.24e-57	88.54	PREDICTED: uncharacterized protein LOC103503504 [Cucumis melo] >KAA0038533.1 unc...	[more]
XP_038886991.1	3.17e-53	85.42	uncharacterized protein LOC120077159 [Benincasa hispida] >XP_038886992.1 unchara...	[more]
XP_022952897.1	6.14e-51	82.29	uncharacterized protein LOC111455443 [Cucurbita moschata] >KAG7011515.1 hypothet...	[more]
XP_023554244.1	3.55e-50	81.25	uncharacterized protein LOC111811567 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy4G067710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59840.1	4.2e-25	58.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G067710.1	Chy4G067710.1	mRNA