Chy3G066060 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G066060
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Zinc finger CCCH domain-containing protein 20
Location	chrH03: 18186541 .. 18187464 (+)
RNA-Seq Expression	Chy3G066060
Synteny	Chy3G066060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGCTGAATCAATGCTCCTCAGTCCCACCTCTCACATTTCAACCTGGGACTCCCTCGACGATCCCTCCCCCGCAATCTCTTCCTATTTCTCCACCGCCCACGTCTCCCCCCTCGATTCACCTACGGCGGCGCTCATGGACTTCGATTCCTCCTTATGGGAAGATCCTGACTTGCCGGCGCCTGTGGACGCCTATTCCTGTGACCAGTTCCGGATGTATGAGTTCAAAGTCCGCTCCTGCGCACGTGGCAGGTCGCACGATTGGACCAAATGTCCGTACGCTCACACCGGCGAGAAGGCTCGCCGTCGAGATCCGAGGAAGTTTAACTATTCCGGCGCCGAGTGCCCGGATTTACGCCATGGGTGTTGTAAAAAAGGAGACGCCTGCGAGTACGCTCATGGAACTTTTGAGATTTGGCTCCACCCAGACCGATACCGGACTCAACCGTGCCGTGACGGAACTGGCTGTCGCCGGCGGGTCTGTTTTTTCGCCCACACGTCGGAGCAACTCCGGATTCCGGGGAAACAAAGTGTCAGGTCTCCACGAGCGAGAGAAATGGCTATCCCTGCTGTGTCATCGCCGACATCGATCCTGTTATCGCCGACTTCGGACTCGCCACCTTTGTCTCCAATCAGCCCTGTAATCAGCGGCGGCGAATCATTCAGCAGATTAGTTGCATTGATGCACAGTCTCCGCCTAGATGAATTAAAAACGAATCCTGGTGTCTCCAGCTTCAGTCCAAATCTCCGTCGGAGCTCCGGTGCAGCATTTGATTTATGGGATAGAGAAAATGAAGAAGAACCAGCAATGGAAAGAGTAGAATCAGGAAGAAATCTACGAGCCCAAATGTATGCCAAACTAATGAGAGAGAATTCAGTGGACCGTGTCCGGCCAATGATATCCGCCGGATCTCTGAACTAA

mRNA sequence

ATGATCGCTGAATCAATGCTCCTCAGTCCCACCTCTCACATTTCAACCTGGGACTCCCTCGACGATCCCTCCCCCGCAATCTCTTCCTATTTCTCCACCGCCCACGTCTCCCCCCTCGATTCACCTACGGCGGCGCTCATGGACTTCGATTCCTCCTTATGGGAAGATCCTGACTTGCCGGCGCCTGTGGACGCCTATTCCTGTGACCAGTTCCGGATGTATGAGTTCAAAGTCCGCTCCTGCGCACGTGGCAGGTCGCACGATTGGACCAAATGTCCGTACGCTCACACCGGCGAGAAGGCTCGCCGTCGAGATCCGAGGAAGTTTAACTATTCCGGCGCCGAGTGCCCGGATTTACGCCATGGGTGTTGTAAAAAAGGAGACGCCTGCGAGTACGCTCATGGAACTTTTGAGATTTGGCTCCACCCAGACCGATACCGGACTCAACCGTGCCGTGACGGAACTGGCTGTCGCCGGCGGGTCTGTTTTTTCGCCCACACGTCGGAGCAACTCCGGATTCCGGGGAAACAAAGTGTCAGGTCTCCACGAGCGAGAGAAATGGCTATCCCTGCTGTGTCATCGCCGACATCGATCCTGTTATCGCCGACTTCGGACTCGCCACCTTTGTCTCCAATCAGCCCTGTAATCAGCGGCGGCGAATCATTCAGCAGATTAGTTGCATTGATGCACAGTCTCCGCCTAGATGAATTAAAAACGAATCCTGGTGTCTCCAGCTTCAGTCCAAATCTCCGTCGGAGCTCCGGTGCAGCATTTGATTTATGGGATAGAGAAAATGAAGAAGAACCAGCAATGGAAAGAGTAGAATCAGGAAGAAATCTACGAGCCCAAATGTATGCCAAACTAATGAGAGAGAATTCAGTGGACCGTGTCCGGCCAATGATATCCGCCGGATCTCTGAACTAA

Coding sequence (CDS)

ATGATCGCTGAATCAATGCTCCTCAGTCCCACCTCTCACATTTCAACCTGGGACTCCCTCGACGATCCCTCCCCCGCAATCTCTTCCTATTTCTCCACCGCCCACGTCTCCCCCCTCGATTCACCTACGGCGGCGCTCATGGACTTCGATTCCTCCTTATGGGAAGATCCTGACTTGCCGGCGCCTGTGGACGCCTATTCCTGTGACCAGTTCCGGATGTATGAGTTCAAAGTCCGCTCCTGCGCACGTGGCAGGTCGCACGATTGGACCAAATGTCCGTACGCTCACACCGGCGAGAAGGCTCGCCGTCGAGATCCGAGGAAGTTTAACTATTCCGGCGCCGAGTGCCCGGATTTACGCCATGGGTGTTGTAAAAAAGGAGACGCCTGCGAGTACGCTCATGGAACTTTTGAGATTTGGCTCCACCCAGACCGATACCGGACTCAACCGTGCCGTGACGGAACTGGCTGTCGCCGGCGGGTCTGTTTTTTCGCCCACACGTCGGAGCAACTCCGGATTCCGGGGAAACAAAGTGTCAGGTCTCCACGAGCGAGAGAAATGGCTATCCCTGCTGTGTCATCGCCGACATCGATCCTGTTATCGCCGACTTCGGACTCGCCACCTTTGTCTCCAATCAGCCCTGTAATCAGCGGCGGCGAATCATTCAGCAGATTAGTTGCATTGATGCACAGTCTCCGCCTAGATGAATTAAAAACGAATCCTGGTGTCTCCAGCTTCAGTCCAAATCTCCGTCGGAGCTCCGGTGCAGCATTTGATTTATGGGATAGAGAAAATGAAGAAGAACCAGCAATGGAAAGAGTAGAATCAGGAAGAAATCTACGAGCCCAAATGTATGCCAAACTAATGAGAGAGAATTCAGTGGACCGTGTCCGGCCAATGATATCCGCCGGATCTCTGAACTAA

Protein sequence

MIAESMLLSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLPAPVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVRSPRAREMAIPAVSSPTSILLSPTSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTNPGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPMISAGSLN*

Homology

[Close]

BLAST of Chy3G066060 vs. ExPASy Swiss-Prot
Match: O82199 (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.9e-71
Identity = 152/339 (44.84%), Postives = 198/339 (58.41%), Query Frame = 0


Query: 1   MIAESML-LSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDL 60
           MI ES    +PT HI  W   +D + +   Y S    S +    A L  +  S   DPD 
Sbjct: 2   MIGESHRGFNPTVHIPPWPLSEDLTVS-DIYGSPDGGSSMMEALAELQRYLPSNEPDPDS 61

Query: 61  -------PAPVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYS 120
                   +P+DAY+CD FRMYEFKVR CARGRSHDWT+CPYAH GEKARRRDPRKF+YS
Sbjct: 62  DPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYS 121

Query: 121 GAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLR 180
           G  CP+ R GCCK+GDACE++HG FE WLHP RYRTQPC+DG  CRRRVCFFAH+ +Q+R
Sbjct: 122 GTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIR 181

Query: 181 IPGKQSVRSPRAREMAIPAVSSPTSILLSPTSDSPPLSPISPVISGGESFSR-------- 240
           +   QS     + ++  P +       +SP+S+SPP+SP     S     SR        
Sbjct: 182 VLPNQSPDRVDSFDVLSPTIRRAFQFSISPSSNSPPVSPRGDSDSSCSLLSRSLGSNLGN 241

Query: 241 -LVALMHSLRLDELKT------------------NPGVSSFSPNLRR-----SSGAAFDL 300
            +VA + +L+L+++K+                  +P  S   P  R      +     ++
Sbjct: 242 DVVASLRNLQLNKVKSSLSSSYNNQIGGYGSGFGSPRGSVLGPGFRSLPTTPTRPGFMNI 301

[Close]

BLAST of Chy3G066060 vs. ExPASy Swiss-Prot
Match: O82307 (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 5.2e-69
Identity = 153/324 (47.22%), Postives = 198/324 (61.11%), Query Frame = 0


Query: 10  PTSHISTWDSLDDPSPAISSYFSTAHVSPLD----SPTAALMDFDS--------SLWEDP 69
           PT HI  WD ++DP+  ISS FS+ +++ ++    SP+  L  F S         L  D 
Sbjct: 12  PTIHIPQWDQINDPTATISSPFSSVNLNSVNDYPHSPSPYLDSFASLFRYLPSNELTNDS 71

Query: 70  DLPAP------VDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNY 129
           D  +        D++S D+FR+YEFK+R CARGRSHDWT+CP+AH GEKARRRDPRKF+Y
Sbjct: 72  DSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHY 131

Query: 130 SGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQL 189
           SG  CP+ R G C++GD+CE++HG FE WLHP RYRTQPC+DGT CRRR+CFFAHT+EQL
Sbjct: 132 SGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQL 191

Query: 190 RIPGKQSVRSPRAREMAIPAVS----SPTSILLSPT----SDSPPLSPISPVISGGESFS 249
           R+        P + +  +   S    SPTSIL+SP+    S+SPPLSP         S  
Sbjct: 192 RV-------LPCSLDPDLGFFSGLATSPTSILVSPSFSPPSESPPLSP---------STG 251

Query: 250 RLVALMHSLRLDELKTNPGVSSFSPNLRRSSGAAFD---------LWDR----ENEEEPA 295
            L+A M  ++L     N G  S+S  +R +    F           W R    E EE PA
Sbjct: 252 ELIASMRKMQL-----NGGGCSWSSPMRSAVRLPFSSSLRPIQAATWPRIREFEIEEAPA 311

[Close]

BLAST of Chy3G066060 vs. ExPASy Swiss-Prot
Match: Q9M0G2 (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.2e-65
Identity = 149/337 (44.21%), Postives = 190/337 (56.38%), Query Frame = 0


Query: 1   MIAESMLLSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWED---- 60
           MI E+    PT  I  W  L++ +   S +FS    SP  S   AL      L  +    
Sbjct: 2   MIGETRRTYPTVEIPPWPVLEELT--TSEFFSPVMNSPDCSMLEALAGLQRYLPSNEPDP 61

Query: 61  ---PDL---PAPVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFN 120
              PDL    +P+DAYSCD FRMY+FKVR CARGRSHDWT+CPYAH GEKARRRDPRK++
Sbjct: 62  ESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYH 121

Query: 121 YSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQ 180
           YSG  CPD R G CKKGD+CE+AHG FE WLHP RYRTQPC+DG  C R++CFFAH+ +Q
Sbjct: 122 YSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQ 181

Query: 181 LRIPGKQSVRSPRAREMAIPAVSSPTSILLSPTSDSPPLSP-----ISPVIS------GG 240
           LR    +S     + +++ P  +    + +SP S SPP+SP      SP+        G 
Sbjct: 182 LRFLHTRSPDRVDSFDVSSPIRARAFQLSISPVSGSPPMSPRADSESSPMTQSLSRSLGS 241

Query: 241 ESFSRLVALMHSLRLDELKT------------------NPGVSSFSPNLRRSSGAAFDLW 298
            S + +V    +L+ + +K+                   PG  S      R      D+W
Sbjct: 242 CSINDVVPSFRNLQFNSVKSFPRNNPLFGFGSPRGSILGPGFQSLPTTPTRPGN--LDIW 301

[Close]

BLAST of Chy3G066060 vs. ExPASy Swiss-Prot
Match: Q9FU27 (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.1e-61
Identity = 142/307 (46.25%), Postives = 178/307 (57.98%), Query Frame = 0


Query: 59  LPAPVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPD 118
           + A VDAY+CD+FRMYEFKVR CARGRSHDWT+CP+AH GEKARRRDPRK++YSG  CPD
Sbjct: 65  MAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPD 124

Query: 119 LRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRI-PGKQ 178
            R G CK+GDACEYAHG FE WLHP RYRTQPC+DGT CRRRVCFFAHT +QLR+ P +Q
Sbjct: 125 FRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPAQQ 184

Query: 179 SVRSPRA---------------REMAIPAV-------SSPTSILL----SPTSDSPPLSP 238
           S  SPR+               R  A  +        SSPTS L+    SP S+SPPLSP
Sbjct: 185 S--SPRSVASSPLAESYDGSPLRRQAFESYLTKTIMSSSPTSTLMSPPKSPPSESPPLSP 244

Query: 239 --ISPVISG-----GESFSRLVALMHSLRLDELKTNPG---------------------- 295
              + +  G     G   + ++A    LRL+++K++P                       
Sbjct: 245 DGAAAIRRGSWPGVGSPVNDVLASFRQLRLNKVKSSPSGGWSYPSSSAVYGSPKAATGLY 304

[Close]

BLAST of Chy3G066060 vs. ExPASy Swiss-Prot
Match: Q6L4N4 (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 8.4e-59
Identity = 138/322 (42.86%), Postives = 171/322 (53.11%), Query Frame = 0


Query: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           A VDAY+CD+FRMYEFKVR CARGRSHDWT+CP+AH GEKARRRDPR++ YSG  CPD R
Sbjct: 68  AAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCYSGTACPDFR 127

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRI---PGKQ 180
            G CK+GDACE+AHG FE WLHP RYRTQPC+DGT CRRRVCFFAHT +QLR+     +Q
Sbjct: 128 KGGCKRGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPPSQQQ 187

Query: 181 SVRSPRA----------------------REMAIPAV-------SSPTSILL----SPTS 240
              SPR                       R  A  +        SSPTS L+    SP S
Sbjct: 188 GSNSPRGCGGGGAGAAASPLAESYDGSPLRRQAFESYLTKSIMSSSPTSTLVSPPRSPPS 247

Query: 241 DSPPLSPIS-------PVISGGESFSRLVALMHSLRLDELKTNPGVSSFSP--------- 300
           +SPPLSP +            G   + +   +  LRL   ++ P  +SF P         
Sbjct: 248 ESPPLSPDAAGALRRGAWAGVGSPVNDVHVSLRQLRLGSPRSAPSCASFLPAGYQYGSPK 307

Query: 301 -----------------------NLRRSSGAAFDLWDRE---NEEEPAMERVESGRNLRA 305
                                   +  +SGA   +   +    EEE  MERVESGR LR 
Sbjct: 308 SPAAAAAAALYSLPSTPTRLSPVTVTTASGATVTVEPLDLGLIEEEQPMERVESGRALRE 367

[Close]

BLAST of Chy3G066060 vs. ExPASy TrEMBL
Match: A0A0A0LNN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352420 PE=4 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 3.0e-176
Identity = 305/307 (99.35%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MIAESMLLSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLL+PTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREMAIPAVSSPTSILLSPTSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRAREMAIPAVSSPTSILLSP+SDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN
Sbjct: 181 SPRAREMAIPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240

Query: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300
           PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM
Sbjct: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300

Query: 301 ISAGSLN 308
           ISAGSLN
Sbjct: 301 ISAGSLN 307

[Close]

BLAST of Chy3G066060 vs. ExPASy TrEMBL
Match: Q5NDD3 (Putative CCCH-type zinc finger protein CsSEF1 OS=Cucumis sativus OX=3659 GN=se2c5 PE=2 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 9.6e-175
Identity = 303/307 (98.70%), Postives = 305/307 (99.35%), Query Frame = 0


Query: 1   MIAESMLLSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLL+PTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREMAIPAVSSPTSILLSPTSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRAREMAIPAVSSPTSILLSP+SDSPPLSPISPVISGGES SRLVALMHSLRLDELKTN
Sbjct: 181 SPRAREMAIPAVSSPTSILLSPSSDSPPLSPISPVISGGESLSRLVALMHSLRLDELKTN 240

Query: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300
           PGVSSFSPNLRRSSGAAFDLWDR NEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM
Sbjct: 241 PGVSSFSPNLRRSSGAAFDLWDRGNEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300

Query: 301 ISAGSLN 308
           ISAGSLN
Sbjct: 301 ISAGSLN 307

[Close]

BLAST of Chy3G066060 vs. ExPASy TrEMBL
Match: A0A5A7V5C0 (Zinc finger CCCH domain-containing protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001160 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 3.5e-169
Identity = 293/307 (95.44%), Postives = 301/307 (98.05%), Query Frame = 0


Query: 1   MIAESMLLSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLL+PT+HISTWDSLDDPS AISSYFS  HVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVD +SCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREMAIPAVSSPTSILLSPTSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRARE+A+PAVSSPTSILLSP+SDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN
Sbjct: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240

Query: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300
           PGVSSFSPNLRR+SG AFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRP+
Sbjct: 241 PGVSSFSPNLRRNSG-AFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPL 300

Query: 301 ISAGSLN 308
           ISAGS N
Sbjct: 301 ISAGSQN 306

[Close]

BLAST of Chy3G066060 vs. ExPASy TrEMBL
Match: A0A1S3BBA7 (LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103487803 PE=4 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.1e-167
Identity = 291/307 (94.79%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MIAESMLLSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLL+PT+HISTWDSLDDPS AISSYFS  HVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVD +SCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREMAIPAVSSPTSILLSPTSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRARE+A+PAVSSPTSILLSP+SDSPPLSPISPVISGGES SRLVALMHSLRLDE KTN
Sbjct: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESSSRLVALMHSLRLDEXKTN 240

Query: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300
           PGVSSFSPNLRR+SG AFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRP+
Sbjct: 241 PGVSSFSPNLRRNSG-AFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPL 300

Query: 301 ISAGSLN 308
           ISAGS N
Sbjct: 301 ISAGSQN 306

[Close]

BLAST of Chy3G066060 vs. ExPASy TrEMBL
Match: A0A6J1HCT8 (zinc finger CCCH domain-containing protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111462347 PE=4 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.7e-147
Identity = 252/307 (82.08%), Postives = 277/307 (90.23%), Query Frame = 0


Query: 1   MIAESMLLSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MI ESM L+PT HIS+WDSLDDP+ AI SYF+  +VSPLDSPTAA+MD+DS LWED DLP
Sbjct: 1   MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLP 60

Query: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           A VDA++CD FRMYEFKVR+CARGRSHDWTKCPYAH GEKARRRDPRKFNYSG ECPDLR
Sbjct: 61  AMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCC KGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIPGKQS+R
Sbjct: 121 HGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIR 180

Query: 181 SPRAREMAIPAVSSPTSILLSPTSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPR RE+A  AVSSPTSIL+S +SDSPP+SPISP+ +GGESFSRLVA+MH+L  DELKTN
Sbjct: 181 SPRGREIAASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTN 240

Query: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300
           PG+S F PN RR+SG AFD WDR+NEEEPAMERVESGRNLRAQMYAKLMRENSV+RVRP+
Sbjct: 241 PGISGFGPNFRRNSG-AFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPL 300

Query: 301 ISAGSLN 308
           I AGS N
Sbjct: 301 ILAGSRN 306

[Close]

BLAST of Chy3G066060 vs. NCBI nr
Match: KGN62412.1 (hypothetical protein Csa_018765 [Cucumis sativus])

HSP 1 Score: 622 bits (1605), Expect = 5.59e-225
Identity = 305/307 (99.35%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MIAESMLLSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLL+PTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREMAIPAVSSPTSILLSPTSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRAREMAIPAVSSPTSILLSP+SDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN
Sbjct: 181 SPRAREMAIPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240

Query: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300
           PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM
Sbjct: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300

Query: 301 ISAGSLN 307
           ISAGSLN
Sbjct: 301 ISAGSLN 307

[Close]

BLAST of Chy3G066060 vs. NCBI nr
Match: NP_001295793.1 (zinc finger CCCH domain-containing protein 20 [Cucumis sativus] >CAI30889.1 putative CCCH-type zinc finger protein CsSEF1 [Cucumis sativus])

HSP 1 Score: 617 bits (1592), Expect = 5.36e-223
Identity = 303/307 (98.70%), Postives = 305/307 (99.35%), Query Frame = 0


Query: 1   MIAESMLLSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLL+PTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREMAIPAVSSPTSILLSPTSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRAREMAIPAVSSPTSILLSP+SDSPPLSPISPVISGGES SRLVALMHSLRLDELKTN
Sbjct: 181 SPRAREMAIPAVSSPTSILLSPSSDSPPLSPISPVISGGESLSRLVALMHSLRLDELKTN 240

Query: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300
           PGVSSFSPNLRRSSGAAFDLWDR NEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM
Sbjct: 241 PGVSSFSPNLRRSSGAAFDLWDRGNEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300

Query: 301 ISAGSLN 307
           ISAGSLN
Sbjct: 301 ISAGSLN 307

[Close]

BLAST of Chy3G066060 vs. NCBI nr
Match: KAA0060981.1 (zinc finger CCCH domain-containing protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 599 bits (1544), Expect = 1.07e-215
Identity = 293/307 (95.44%), Postives = 301/307 (98.05%), Query Frame = 0


Query: 1   MIAESMLLSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLL+PT+HISTWDSLDDPS AISSYFS  HVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVD +SCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREMAIPAVSSPTSILLSPTSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRARE+A+PAVSSPTSILLSP+SDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN
Sbjct: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240

Query: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300
           PGVSSFSPNLRR+SGA FDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRP+
Sbjct: 241 PGVSSFSPNLRRNSGA-FDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPL 300

Query: 301 ISAGSLN 307
           ISAGS N
Sbjct: 301 ISAGSQN 306

[Close]

BLAST of Chy3G066060 vs. NCBI nr
Match: XP_008444505.1 (PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 20 [Cucumis melo])

HSP 1 Score: 594 bits (1531), Expect = 1.03e-213
Identity = 291/307 (94.79%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MIAESMLLSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLL+PT+HISTWDSLDDPS AISSYFS  HVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVD +SCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREMAIPAVSSPTSILLSPTSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRARE+A+PAVSSPTSILLSP+SDSPPLSPISPVISGGES SRLVALMHSLRLDE KTN
Sbjct: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESSSRLVALMHSLRLDEXKTN 240

Query: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300
           PGVSSFSPNLRR+SGA FDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRP+
Sbjct: 241 PGVSSFSPNLRRNSGA-FDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPL 300

Query: 301 ISAGSLN 307
           ISAGS N
Sbjct: 301 ISAGSQN 306

[Close]

BLAST of Chy3G066060 vs. NCBI nr
Match: KAG7029281.1 (Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 528 bits (1361), Expect = 8.30e-188
Identity = 253/307 (82.41%), Postives = 277/307 (90.23%), Query Frame = 0


Query: 1   MIAESMLLSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MI ESM L+PT HIS+WDSLDDP+ AI SYF+  +VSPLDSPTAA+MD+DSSLWED DLP
Sbjct: 1   MINESMFLNPTPHISSWDSLDDPAAAIPSYFTAGNVSPLDSPTAAVMDYDSSLWEDQDLP 60

Query: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           A VDA++CD FRMYEFKVR+CARGRSHDWTKCPYAH GEKARRRDPRKF YSG ECPDLR
Sbjct: 61  AMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFKYSGTECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCC KGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIPGKQS+R
Sbjct: 121 HGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIR 180

Query: 181 SPRAREMAIPAVSSPTSILLSPTSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPR RE+A  AVSSPTSIL+S +SDSPP+SPISP+ +GGESFSRLVALMH+L  DELKTN
Sbjct: 181 SPRGREIAASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSRLVALMHNLHFDELKTN 240

Query: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300
           PG+S F PN RR+SGA FD WDR+NEEEPAMERVESGRNLRAQMYAKLMRENSV+RVRP+
Sbjct: 241 PGISGFGPNFRRNSGA-FDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPL 300

Query: 301 ISAGSLN 307
           I AGS N
Sbjct: 301 ILAGSRN 306

[Close]

BLAST of Chy3G066060 vs. TAIR 10
Match: AT2G19810.1 (CCCH-type zinc finger family protein )

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-72
Identity = 152/339 (44.84%), Postives = 198/339 (58.41%), Query Frame = 0


Query: 1   MIAESML-LSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDL 60
           MI ES    +PT HI  W   +D + +   Y S    S +    A L  +  S   DPD 
Sbjct: 2   MIGESHRGFNPTVHIPPWPLSEDLTVS-DIYGSPDGGSSMMEALAELQRYLPSNEPDPDS 61

Query: 61  -------PAPVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYS 120
                   +P+DAY+CD FRMYEFKVR CARGRSHDWT+CPYAH GEKARRRDPRKF+YS
Sbjct: 62  DPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYS 121

Query: 121 GAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLR 180
           G  CP+ R GCCK+GDACE++HG FE WLHP RYRTQPC+DG  CRRRVCFFAH+ +Q+R
Sbjct: 122 GTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIR 181

Query: 181 IPGKQSVRSPRAREMAIPAVSSPTSILLSPTSDSPPLSPISPVISGGESFSR-------- 240
           +   QS     + ++  P +       +SP+S+SPP+SP     S     SR        
Sbjct: 182 VLPNQSPDRVDSFDVLSPTIRRAFQFSISPSSNSPPVSPRGDSDSSCSLLSRSLGSNLGN 241

Query: 241 -LVALMHSLRLDELKT------------------NPGVSSFSPNLRR-----SSGAAFDL 300
            +VA + +L+L+++K+                  +P  S   P  R      +     ++
Sbjct: 242 DVVASLRNLQLNKVKSSLSSSYNNQIGGYGSGFGSPRGSVLGPGFRSLPTTPTRPGFMNI 301

[Close]

BLAST of Chy3G066060 vs. TAIR 10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 262.7 bits (670), Expect = 3.7e-70
Identity = 153/324 (47.22%), Postives = 198/324 (61.11%), Query Frame = 0


Query: 10  PTSHISTWDSLDDPSPAISSYFSTAHVSPLD----SPTAALMDFDS--------SLWEDP 69
           PT HI  WD ++DP+  ISS FS+ +++ ++    SP+  L  F S         L  D 
Sbjct: 12  PTIHIPQWDQINDPTATISSPFSSVNLNSVNDYPHSPSPYLDSFASLFRYLPSNELTNDS 71

Query: 70  DLPAP------VDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNY 129
           D  +        D++S D+FR+YEFK+R CARGRSHDWT+CP+AH GEKARRRDPRKF+Y
Sbjct: 72  DSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHY 131

Query: 130 SGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQL 189
           SG  CP+ R G C++GD+CE++HG FE WLHP RYRTQPC+DGT CRRR+CFFAHT+EQL
Sbjct: 132 SGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQL 191

Query: 190 RIPGKQSVRSPRAREMAIPAVS----SPTSILLSPT----SDSPPLSPISPVISGGESFS 249
           R+        P + +  +   S    SPTSIL+SP+    S+SPPLSP         S  
Sbjct: 192 RV-------LPCSLDPDLGFFSGLATSPTSILVSPSFSPPSESPPLSP---------STG 251

Query: 250 RLVALMHSLRLDELKTNPGVSSFSPNLRRSSGAAFD---------LWDR----ENEEEPA 295
            L+A M  ++L     N G  S+S  +R +    F           W R    E EE PA
Sbjct: 252 ELIASMRKMQL-----NGGGCSWSSPMRSAVRLPFSSSLRPIQAATWPRIREFEIEEAPA 311

[Close]

BLAST of Chy3G066060 vs. TAIR 10
Match: AT2G25900.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 262.7 bits (670), Expect = 3.7e-70
Identity = 153/324 (47.22%), Postives = 198/324 (61.11%), Query Frame = 0


Query: 10  PTSHISTWDSLDDPSPAISSYFSTAHVSPLD----SPTAALMDFDS--------SLWEDP 69
           PT HI  WD ++DP+  ISS FS+ +++ ++    SP+  L  F S         L  D 
Sbjct: 12  PTIHIPQWDQINDPTATISSPFSSVNLNSVNDYPHSPSPYLDSFASLFRYLPSNELTNDS 71

Query: 70  DLPAP------VDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNY 129
           D  +        D++S D+FR+YEFK+R CARGRSHDWT+CP+AH GEKARRRDPRKF+Y
Sbjct: 72  DSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHY 131

Query: 130 SGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQL 189
           SG  CP+ R G C++GD+CE++HG FE WLHP RYRTQPC+DGT CRRR+CFFAHT+EQL
Sbjct: 132 SGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQL 191

Query: 190 RIPGKQSVRSPRAREMAIPAVS----SPTSILLSPT----SDSPPLSPISPVISGGESFS 249
           R+        P + +  +   S    SPTSIL+SP+    S+SPPLSP         S  
Sbjct: 192 RV-------LPCSLDPDLGFFSGLATSPTSILVSPSFSPPSESPPLSP---------STG 251

Query: 250 RLVALMHSLRLDELKTNPGVSSFSPNLRRSSGAAFD---------LWDR----ENEEEPA 295
            L+A M  ++L     N G  S+S  +R +    F           W R    E EE PA
Sbjct: 252 ELIASMRKMQL-----NGGGCSWSSPMRSAVRLPFSSSLRPIQAATWPRIREFEIEEAPA 311

[Close]

BLAST of Chy3G066060 vs. TAIR 10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 251.5 bits (641), Expect = 8.6e-67
Identity = 149/337 (44.21%), Postives = 190/337 (56.38%), Query Frame = 0


Query: 1   MIAESMLLSPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWED---- 60
           MI E+    PT  I  W  L++ +   S +FS    SP  S   AL      L  +    
Sbjct: 2   MIGETRRTYPTVEIPPWPVLEELT--TSEFFSPVMNSPDCSMLEALAGLQRYLPSNEPDP 61

Query: 61  ---PDL---PAPVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFN 120
              PDL    +P+DAYSCD FRMY+FKVR CARGRSHDWT+CPYAH GEKARRRDPRK++
Sbjct: 62  ESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYH 121

Query: 121 YSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQ 180
           YSG  CPD R G CKKGD+CE+AHG FE WLHP RYRTQPC+DG  C R++CFFAH+ +Q
Sbjct: 122 YSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQ 181

Query: 181 LRIPGKQSVRSPRAREMAIPAVSSPTSILLSPTSDSPPLSP-----ISPVIS------GG 240
           LR    +S     + +++ P  +    + +SP S SPP+SP      SP+        G 
Sbjct: 182 LRFLHTRSPDRVDSFDVSSPIRARAFQLSISPVSGSPPMSPRADSESSPMTQSLSRSLGS 241

Query: 241 ESFSRLVALMHSLRLDELKT------------------NPGVSSFSPNLRRSSGAAFDLW 298
            S + +V    +L+ + +K+                   PG  S      R      D+W
Sbjct: 242 CSINDVVPSFRNLQFNSVKSFPRNNPLFGFGSPRGSILGPGFQSLPTTPTRPGN--LDIW 301

[Close]

BLAST of Chy3G066060 vs. TAIR 10
Match: AT2G41900.1 (CCCH-type zinc finger protein with ARM repeat domain )

HSP 1 Score: 189.5 bits (480), Expect = 4.0e-48
Identity = 108/226 (47.79%), Postives = 134/226 (59.29%), Query Frame = 0


Query: 37  SPLDSP-TAALMDFDSSLWEDPDLPAPVDA-YSCDQFRMYEFKVRSCARGRSHDWTKCPY 96
           SPL SP      +F      DP LP   ++ Y+ D+FRMY FKVR C+R  SHDWT+CP+
Sbjct: 226 SPLGSPFKLKSTEFKKEYPVDPSLPDIKNSIYATDEFRMYSFKVRPCSRAYSHDWTECPF 285

Query: 97  AHTGEKARRRDPRKFNYSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDG 156
            H GE ARRRDPRKF+YS   CPD R G C++GD CEYAHG FE WLHP +YRT+ C+DG
Sbjct: 286 VHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDG 345

Query: 157 TGCRRRVCFFAHTSEQLR---IPGKQSVRSPRAREMAIPAVSSPTSILLSPTSDSPPLSP 216
           TGC RRVCFFAHT E+LR        +V SPR+      A+    S+L    S    +SP
Sbjct: 346 TGCARRVCFFAHTPEELRPLYASTGSAVPSPRSNADYAAAL----SLLPGSPSGVSVMSP 405

Query: 217 ISPVISG-GESFSRLVALMHSLRLDELKTNPGVSSFSPNLRRSSGA 257
           +SP  +G G S S +     ++    L   PG +  S  LR S  A
Sbjct: 406 LSPSAAGNGMSHSNMAWPQPNVPALHL---PGSNLQSSRLRSSLNA 444

The following BLAST results are available for this feature:

BLAST of Chy3G066060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82199	1.9e-71	44.84	Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O82307	5.2e-69	47.22	Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M0G2	1.2e-65	44.21	Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FU27	1.1e-61	46.25	Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=...	[more]
Q6L4N4	8.4e-59	42.86	Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Chy3G066060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNN8	3.0e-176	99.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352420 PE=4 SV=1	[more]
Q5NDD3	9.6e-175	98.70	Putative CCCH-type zinc finger protein CsSEF1 OS=Cucumis sativus OX=3659 GN=se2c...	[more]
A0A5A7V5C0	3.5e-169	95.44	Zinc finger CCCH domain-containing protein 20 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3BBA7	1.1e-167	94.79	LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 20 OS=Cucumis me...	[more]
A0A6J1HCT8	1.7e-147	82.08	zinc finger CCCH domain-containing protein 20-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of Chy3G066060 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN62412.1	5.59e-225	99.35	hypothetical protein Csa_018765 [Cucumis sativus]	[more]
NP_001295793.1	5.36e-223	98.70	zinc finger CCCH domain-containing protein 20 [Cucumis sativus] >CAI30889.1 puta...	[more]
KAA0060981.1	1.07e-215	95.44	zinc finger CCCH domain-containing protein 20 [Cucumis melo var. makuwa]	[more]
XP_008444505.1	1.03e-213	94.79	PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 20 [C...	[more]
KAG7029281.1	8.30e-188	82.41	Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma s...	[more]

BLAST of Chy3G066060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19810.1	1.4e-72	44.84	CCCH-type zinc finger family protein	[more]
AT2G25900.1	3.7e-70	47.22	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.2	3.7e-70	47.22	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT4G29190.1	8.6e-67	44.21	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G41900.1	4.0e-48	47.79	CCCH-type zinc finger protein with ARM repeat domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 145..168 e-value: 46.0 score: 3.0 coord: 110..136 e-value: 0.035 score: 23.3
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 110..137 score: 12.117198
None	No IPR available	GENE3D	4.10.1000.10		coord: 107..178 e-value: 9.8E-7 score: 30.5
None	No IPR available	PANTHER	PTHR14493:SF116	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20	coord: 249..303 coord: 7..242
None	No IPR available	PANTHER	PTHR14493	UNKEMPT FAMILY MEMBER	coord: 249..303 coord: 7..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G066060.1	Chy3G066060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061157	mRNA destabilization
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003727	single-stranded RNA binding