Chy3G065750 (gene) Cucumber (hystrix) v1

Overview
NameChy3G065750
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH03: 17942910 .. 17943449 (-)
RNA-Seq ExpressionChy3G065750
SyntenyChy3G065750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAACAAGAGCAAGAAGACCAGTGCATATTTTTGGACTTTTCCATCTAAAGAATACAAAAACTCAGGATCTAAACGTGATTTTGAAATGAAAACCCACCAACTTGAAAACTCTCACCCTTATCCCAGTCTCTTTCTTTCGATTTGGAGCCTGAAGAAATTGATCCTTCTTCATTCAAGCATATCCAGTGCAAAGCATTTGAGATGATTTTCGAGTCTGAGATCTGAGTCATCTCCTACATTGACGTGGGCTTTTCCTATGCTTTTCTCTTTTTTTGTGTATGATGACATTATTAGTGCAGAAAGGTCCTTTGTCTATGTTGGAATGGACTTTGTACCTCTACCTGTAGGGGCAGAGTTCGCAGATGCCTATGGATTCCCTCAATACTCTCTCTCCATCGATTTTGAGGTTTGATGGGTTCGGTTTTTCTTTATTTTTTTAATTAAAAAGTTCGTGGCTTTATAATTTATTAAAGTAACCCAGATGGCAGAAACTGTAAATTCTAAACATACATTCAGCAGCAAAGACCTCGATTGA

mRNA sequence

ATGGGCAACAAGAGCAAGAAGACCAGTGCATATTTTTGGACTTTTCCATCTAAAGAATACAAAAACTCAGGATCTAAACGTGATTTTGAAATGAAAACCCACCAACTTGAAAACTCTCACCCTTATCCCAGTCTCTTTCTTTCGATTTGGAGCCTGAAGAAATTGATCCTTCTTCATTCAAGCATATCCAGTGCAAAGCATTTGAGATGATTTTCGAGTCTGAGATCTGAGTCATCTCCTACATTGACGTGGGCTTTTCCTATGCTTTTCTCTTTTTTTGTGTATGATGACATTATTAGTGCAGAAAGGTCCTTTGTCTATGTTGGAATGGACTTTGTACCTCTACCTGTAGGGGCAGAGTTCGCAGATGCCTATGGATTCCCTCAATACTCTCTCTCCATCGATTTTGAGGTTTGATGGCAGCAAAGACCTCGATTGA

Coding sequence (CDS)

ATGGGCAACAAGAGCAAGAAGACCAGTGCATATTTTTGGACTTTTCCATCTAAAGAATACAAAAACTCAGGATCTAAACGTGATTTTGAAATGAAAACCCACCAACTTGAAAACTCTCACCCTTATCCCAGTCTCTTTCTTTCGATTTGGAGCCTGAAGAAATTGATCCTTCTTCATTCAAGCATATCCAGTGCAAAGCATTTGAGATGATTTTCGAGTCTGAGATCTGAGTCATCTCCTACATTGACGTGGGCTTTTCCTATGCTTTTCTCTTTTTTTGTGTATGATGACATTATTAGTGCAGAAAGGTCCTTTGTCTATGTTGGAATGGACTTTGTACCTCTACCTGTAGGGGCAGAGTTCGCAGATGCCTATGGATTCCCTCAATACTCTCTCTCCATCGATTTTGAGGTTTGATGGCAGCAAAGACCTCGATTGA

Protein sequence

MGNKSKKTSAYFWTFPSKEYKNSGSKRDFEMKTHQLENSHPYPSLFLSIWSLKKLILLHSSISSAKHLR*FSSLRSESSPTLTWAFPMLFSFFVYDDIISAERSFVYVGMDFVPLPVGAEFADAYGFPQYSLSIDFEV*WQQRPRLX
Homology
[Close]
BLAST of Chy3G065750 vs. ExPASy TrEMBL
Match: A0A0A0LR42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354720 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 8.7e-65
Identity = 127/133 (95.49%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MGNKSKKTSAYFWTFPSKEYKNSGSKRDFEMKTHQLENSHPYPSLFLSIWSLKKLILLHS 60
           MGNK+KKTSAYFWTFPSKEYKNSGSKRDFEMKTHQLENSHPYPSL LSIWSLKKLILLHS
Sbjct: 1   MGNKNKKTSAYFWTFPSKEYKNSGSKRDFEMKTHQLENSHPYPSLLLSIWSLKKLILLHS 60

Query: 61  SISSAKHLR*FSSLRSESSPTLTWAFPMLFSFFVYDDIISAERSFVYVGMDFVPLPVGAE 120
           SISSAKHLR FSSLRSESS TLTWAFPMLFSFFVYDDIISAERSFVYVGMDFVPLPVGAE
Sbjct: 61  SISSAKHLRLFSSLRSESSATLTWAFPMLFSFFVYDDIISAERSFVYVGMDFVPLPVGAE 120

Query: 121 FADAYGFPQYSLS 134
           FADAYGFPQ++LS
Sbjct: 121 FADAYGFPQFTLS 133

[Close]
BLAST of Chy3G065750 vs. NCBI nr
Match: KGN62446.1 (hypothetical protein Csa_018581 [Cucumis sativus])

HSP 1 Score: 256 bits (655), Expect = 1.70e-85
Identity = 127/133 (95.49%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MGNKSKKTSAYFWTFPSKEYKNSGSKRDFEMKTHQLENSHPYPSLFLSIWSLKKLILLHS 60
           MGNK+KKTSAYFWTFPSKEYKNSGSKRDFEMKTHQLENSHPYPSL LSIWSLKKLILLHS
Sbjct: 1   MGNKNKKTSAYFWTFPSKEYKNSGSKRDFEMKTHQLENSHPYPSLLLSIWSLKKLILLHS 60

Query: 61  SISSAKHLR*FSSLRSESSPTLTWAFPMLFSFFVYDDIISAERSFVYVGMDFVPLPVGAE 120
           SISSAKHLR FSSLRSESS TLTWAFPMLFSFFVYDDIISAERSFVYVGMDFVPLPVGAE
Sbjct: 61  SISSAKHLRLFSSLRSESSATLTWAFPMLFSFFVYDDIISAERSFVYVGMDFVPLPVGAE 120

Query: 121 FADAYGFPQYSLS 133
           FADAYGFPQ++LS
Sbjct: 121 FADAYGFPQFTLS 133

The following BLAST results are available for this feature:
BLAST of Chy3G065750 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G065750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LR428.7e-6595.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354720 PE=4 SV=1[more]
BLAST of Chy3G065750 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62446.11.70e-8595.49hypothetical protein Csa_018581 [Cucumis sativus][more]
BLAST of Chy3G065750 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G065750.1Chy3G065750.1mRNA