Chy3G062160 (gene) Cucumber (hystrix) v1

Overview
NameChy3G062160
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH03: 15451273 .. 15451713 (+)
RNA-Seq ExpressionChy3G062160
SyntenyChy3G062160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCATATATACTGGATCGCACGAACCATCGATGCTTTTCCAAGAAAGAGGCAAGAAACTAAACACATGGACAGGAAGAGAAGAGAAGCACAACCAGCTTGTAGAGTATCGAATTACAACTACTTAGCTGAAGTTTTTGAAGAAATGCCGACAAATTGTGGTCTCTGGACGAGAAAATTGATCTTCGATCTTGGATCAAGGAGTTTACGACGATCTCCGATGAACCCTAGTTGAAATGGTGATAGAAGGGAAATACTTGTTCCAGAAATTTGTTGGAAATGATTTACAAGAAAGAGAGAGAGAAGTGGTGTAAACTGGCAGCGTAGCTTCCAAGCTGAATCGGCAATTTACAGTAGCCCACCAGTGTCCCACGATCTTCGGGATTTAGCGGTTCTCTGTGCACTGACCGGCGGCTTCCGGCAATCGTATCGTTATTAA

mRNA sequence

ATGCCGCATATATACTGGATCGCACGAACCATCGATGCTTTTCCAAGAAAGAGGCAAGAAACTAAACACATGGACAGGAAGAGAAGAGAAGCACAACCAGCTTGTAGAGTATCGAATTACAACTACTTAGCTGAACGTAGCTTCCAAGCTGAATCGGCAATTTACAGTAGCCCACCAGTGTCCCACGATCTTCGGGATTTAGCGGTTCTCTGTGCACTGACCGGCGGCTTCCGGCAATCGTATCGTTATTAA

Coding sequence (CDS)

ATGCCGCATATATACTGGATCGCACGAACCATCGATGCTTTTCCAAGAAAGAGGCAAGAAACTAAACACATGGACAGGAAGAGAAGAGAAGCACAACCAGCTTGTAGAGTATCGAATTACAACTACTTAGCTGAACGTAGCTTCCAAGCTGAATCGGCAATTTACAGTAGCCCACCAGTGTCCCACGATCTTCGGGATTTAGCGGTTCTCTGTGCACTGACCGGCGGCTTCCGGCAATCGTATCGTTATTAA

Protein sequence

MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLAERSFQAESAIYSSPPVSHDLRDLAVLCALTGGFRQSYRY*
Homology
[Close]
BLAST of Chy3G062160 vs. ExPASy TrEMBL
Match: A0A0A0LLL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375220 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.0e-38
Identity = 81/83 (97.59%), Postives = 81/83 (97.59%), Query Frame = 0 

Query: 1  MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLAERSFQAESAIYSSPPV 60
          MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLA RSFQAESAIYSSPPV
Sbjct: 1  MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLA-RSFQAESAIYSSPPV 60

Query: 61 SHDLRDLAVLCALTGGFRQSYRY 84
          SHDLRDL VLCALTGGFRQSYRY
Sbjct: 61 SHDLRDLTVLCALTGGFRQSYRY 82

[Close]
BLAST of Chy3G062160 vs. NCBI nr
Match: KGN62830.1 (hypothetical protein Csa_022018 [Cucumis sativus])

HSP 1 Score: 165 bits (418), Expect = 2.30e-51
Identity = 81/83 (97.59%), Postives = 81/83 (97.59%), Query Frame = 0 

Query: 1  MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLAERSFQAESAIYSSPPV 60
          MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLA RSFQAESAIYSSPPV
Sbjct: 1  MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLA-RSFQAESAIYSSPPV 60

Query: 61 SHDLRDLAVLCALTGGFRQSYRY 83
          SHDLRDL VLCALTGGFRQSYRY
Sbjct: 61 SHDLRDLTVLCALTGGFRQSYRY 82

The following BLAST results are available for this feature:
BLAST of Chy3G062160 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G062160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLL13.0e-3897.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375220 PE=4 SV=1[more]
BLAST of Chy3G062160 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62830.12.30e-5197.59hypothetical protein Csa_022018 [Cucumis sativus][more]
BLAST of Chy3G062160 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G062160.1Chy3G062160.1mRNA