Chy3G056420 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCGGATCCAATGGCGGCGGCGTTGTTCGACGAAGTAGAAGATCAGGATTATCCATACGAGAGTTCCATCAACGCGAACATCCTGAACTTTGGGAACGACCGAAACCCAACGCTGGATGATTTGCAGTCGACGGCGGAGCAGCCAGCGGGGTGTGGGTTTGGGAACATGGGAATGGTGGAATTACTGAGGCAGTTTAGTTATGGTAACGGGCAATATGATTCTGAAGCGGGGCCGTCCAATATTGGTGGGGAAGAGGAAGATCATCATCAGGATGATAATTATACGAATATTCCGAGTGATGTGGAATCTAAGTTGCTTCCTATTTGGCCTCTCACTCCTCTTCCTTTTTTATGTAGTTGTTGCCAAGTTCTTAGAGAATTTCTTCATACTAATGGTATGGCTCCCTCTTCAGTAATTTTCATCCAAATTATCTTTCAGTTTTTGTTGAAACATAGTGTGTATGATATTGTGCTCTGTCACGTTGATTTCTCAAAGATTAGGGTAAACATTCTTTCGATGAAACCATGTATAAATTTTTAAGATAATGTTCCTTTCATTTTCGTAATTTTATGAAATTTTGTATTTCTAAAATTAAGGGTAGAATTGTCAGAAAATTAATTTTCTCTTTTGAAACTTTTGTATGTAGTGTAGATATATATATTTATTAGTAATTTCCTTTTTATAACATTGGTTAATTACGAAGAAAAAAAAGTGAAACTTGTGTTTATTTAATCCTAGTTTTCAGAAACTACGAGTTTTAGTTTGGCAAAAATTATATATTTTTTTGTTTACTTTTGTTTTTTAATTTAGGGTTGGTTTCTCTCCTTATTTATTCTATAGGAACTTCAAATATATTAAAGACGTACTTGAATAATTAATAGTCAAAATTTAACATGTTGAAATGGTATTTTTAGGTTTAATTTTTATAACATAAATCAAAGGATTATGGCCTAAATTGTTATTAAACAGAGCTTAATGAAACATTTAGGGGTTAATTTTGTAGGTTTTATTATGTCGAATCTTATGTAATTAGTTTCAATTCTTTACTTTAATCCTCTCAAAATTTTAATTTTACGACCCAAAATCGTTTATTATTATTATTATTATTCTTTTGAATCTAAATGTTGGCAGGAGTAAACAGCAGAAAACTAGAGATTCATGGTAGGCTAGGGATGATTAGCCATGCAATATTGGAGCATAAACCCATTGTTAATGTGGATAATACAAGTCCTCAGTATCAAATGTTCGAGTAAGAGAATTAAATTCAAACCAAAATATTATTTTATTTATTTAATTATGATTATGATACAATTAATTAATTAATTAACTAAAGGGTTGAAATGAAAAATGATATATTAGTTTTTGCGAGAAAAGCTGTGAGGAGATAAAGCAATTTCTACTACAGTATTGTCTGAAGCAAATATTGGAAGATTACAATATGATTCCAGATCCAATGTCCAATTTCTACGATGCCCTTTGTGTTGGAATTGATTGGTTTGAAAATCTCAATACTGATGGTTTCTTTCAACTCTCTCCTGACAATTCTGGTTCGTTTTCTTTTTTTCCTTCCAAATTTTAATTATAATGTTCAACTCCATTTATCTCACCTTTCCATTTTCTTTCTTTCTAATTTTGTGTTTTCCTTCGTTTATTGTTTTTGAAGAAGATGATGACATGGAACAACCCACTCCAGACTGCCAAAATGAGCCGCCGGAGCAACCGGAGGAGCAGCCTCCAAGACGTCGACCCTCCCTTGCTGCACAGGTTTCAATTCCATTTTACTGTTTTTCTATTTTACTTTAATTTCCTATGTCATTCAACTTTAAAAATCTAGTACAAAATTGAAAACTAACAATTCTTTAGGACATAATGTATATTCAAATATAAAGAATTGAAAGTTGGTGACTCATTAAAATGTGGATAATTAAATGTAATTTGTCTGCAGCGACAAAGAACGGGAAGAATGACGGTGAATGACGTGTGGGAATATCTTCATCTTCCAATATCAGAAGCTTCAAAAAAACTGAATGTGTGCAATACTGTATTGAAGAAAATATGCCGTCGGAGCGGTCTTAGCCGGTGGCCTTACAGAAAGGTAGGTGTGTGTGTTTTTCTTTATTAATTTTTCGACTACTCTGATTTTCACAGTAAAATGACTTATAACTTATTTTGAACGACATAGATACGTAGTTACGAGAGGCGAATAGCAGCACTGAGAGCCACCATGAATTCAAGCTACGGAGATACCAGAGTTCGAGCTGAAGCCGAGATTGAAAGGGTTCAAAAAGAACTTGCTGATTTTTGTGCTCGAATCAGGATTTGA ATGGCAGCGGATCCAATGGCGGCGGCGTTGTTCGACGAAGTAGAAGATCAGGATTATCCATACGAGAGTTCCATCAACGCGAACATCCTGAACTTTGGGAACGACCGAAACCCAACGCTGGATGATTTGCAGTCGACGGCGGAGCAGCCAGCGGGGTGTGGGTTTGGGAACATGGGAATGGTGGAATTACTGAGGCAGTTTAGTTATGGTAACGGGCAATATGATTCTGAAGCGGGGCCGTCCAATATTGGTGGGGAAGAGGAAGATCATCATCAGGATGATAATTATACGAATATTCCGAGTGATGTGGAATCTAAGTTGCTTCCTATTTGGCCTCTCACTCCTCTTCCTTTTTTATGTAGTTGTTGCCAAGTTCTTAGAGAATTTCTTCATACTAATGGAGTAAACAGCAGAAAACTAGAGATTCATGGTAGGCTAGGGATGATTAGCCATGCAATATTGGAGCATAAACCCATTGTTAATGTGGATAATACAAGTCCTCAGTATCAAATGTTCGATTTTTGCGAGAAAAGCTGTGAGGAGATAAAGCAATTTCTACTACAGTATTGTCTGAAGCAAATATTGGAAGATTACAATATGATTCCAGATCCAATGTCCAATTTCTACGATGCCCTTTGTGTTGGAATTGATTGGTTTGAAAATCTCAATACTGATGGTTTCTTTCAACTCTCTCCTGACAATTCTGAAGATGATGACATGGAACAACCCACTCCAGACTGCCAAAATGAGCCGCCGGAGCAACCGGAGGAGCAGCCTCCAAGACGTCGACCCTCCCTTGCTGCACAGCGACAAAGAACGGGAAGAATGACGGTGAATGACGTGTGGGAATATCTTCATCTTCCAATATCAGAAGCTTCAAAAAAACTGAATGTGTGCAATACTGTATTGAAGAAAATATGCCGTCGGAGCGGTCTTAGCCGGTGGCCTTACAGAAAGATACGTAGTTACGAGAGGCGAATAGCAGCACTGAGAGCCACCATGAATTCAAGCTACGGAGATACCAGAGTTCGAGCTGAAGCCGAGATTGAAAGGGTTCAAAAAGAACTTGCTGATTTTTGTGCTCGAATCAGGATTTGA ATGGCAGCGGATCCAATGGCGGCGGCGTTGTTCGACGAAGTAGAAGATCAGGATTATCCATACGAGAGTTCCATCAACGCGAACATCCTGAACTTTGGGAACGACCGAAACCCAACGCTGGATGATTTGCAGTCGACGGCGGAGCAGCCAGCGGGGTGTGGGTTTGGGAACATGGGAATGGTGGAATTACTGAGGCAGTTTAGTTATGGTAACGGGCAATATGATTCTGAAGCGGGGCCGTCCAATATTGGTGGGGAAGAGGAAGATCATCATCAGGATGATAATTATACGAATATTCCGAGTGATGTGGAATCTAAGTTGCTTCCTATTTGGCCTCTCACTCCTCTTCCTTTTTTATGTAGTTGTTGCCAAGTTCTTAGAGAATTTCTTCATACTAATGGAGTAAACAGCAGAAAACTAGAGATTCATGGTAGGCTAGGGATGATTAGCCATGCAATATTGGAGCATAAACCCATTGTTAATGTGGATAATACAAGTCCTCAGTATCAAATGTTCGATTTTTGCGAGAAAAGCTGTGAGGAGATAAAGCAATTTCTACTACAGTATTGTCTGAAGCAAATATTGGAAGATTACAATATGATTCCAGATCCAATGTCCAATTTCTACGATGCCCTTTGTGTTGGAATTGATTGGTTTGAAAATCTCAATACTGATGGTTTCTTTCAACTCTCTCCTGACAATTCTGAAGATGATGACATGGAACAACCCACTCCAGACTGCCAAAATGAGCCGCCGGAGCAACCGGAGGAGCAGCCTCCAAGACGTCGACCCTCCCTTGCTGCACAGCGACAAAGAACGGGAAGAATGACGGTGAATGACGTGTGGGAATATCTTCATCTTCCAATATCAGAAGCTTCAAAAAAACTGAATGTGTGCAATACTGTATTGAAGAAAATATGCCGTCGGAGCGGTCTTAGCCGGTGGCCTTACAGAAAGATACGTAGTTACGAGAGGCGAATAGCAGCACTGAGAGCCACCATGAATTCAAGCTACGGAGATACCAGAGTTCGAGCTGAAGCCGAGATTGAAAGGGTTCAAAAAGAACTTGCTGATTTTTGTGCTCGAATCAGGATTTGA MAADPMAAALFDEVEDQDYPYESSINANILNFGNDRNPTLDDLQSTAEQPAGCGFGNMGMVELLRQFSYGNGQYDSEAGPSNIGGEEEDHHQDDNYTNIPSDVESKLLPIWPLTPLPFLCSCCQVLREFLHTNGVNSRKLEIHGRLGMISHAILEHKPIVNVDNTSPQYQMFDFCEKSCEEIKQFLLQYCLKQILEDYNMIPDPMSNFYDALCVGIDWFENLNTDGFFQLSPDNSEDDDMEQPTPDCQNEPPEQPEEQPPRRRPSLAAQRQRTGRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYERRIAALRATMNSSYGDTRVRAEAEIERVQKELADFCARIRI* Homology
BLAST of Chy3G056420 vs. ExPASy Swiss-Prot
Match: Q84TH9 (Protein NLP7 OS=Arabidopsis thaliana OX=3702 GN=NLP7 PE=1 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 2.0e-06 Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of Chy3G056420 vs. ExPASy Swiss-Prot
Match: Q9M9U9 (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.0e-06 Identity = 23/72 (31.94%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of Chy3G056420 vs. ExPASy Swiss-Prot
Match: Q9M1B0 (Protein NLP9 OS=Arabidopsis thaliana OX=3702 GN=NLP9 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.6e-06 Identity = 23/64 (35.94%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of Chy3G056420 vs. ExPASy Swiss-Prot
Match: Q0JC27 (Protein NLP2 OS=Oryza sativa subsp. japonica OX=39947 GN=NLP2 PE=2 SV=2) HSP 1 Score: 52.0 bits (123), Expect = 1.7e-05 Identity = 32/92 (34.78%), Postives = 46/92 (50.00%), Query Frame = 0
BLAST of Chy3G056420 vs. ExPASy Swiss-Prot
Match: Q9FGD1 (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 2.8e-05 Identity = 43/162 (26.54%), Postives = 84/162 (51.85%), Query Frame = 0
BLAST of Chy3G056420 vs. ExPASy TrEMBL
Match: A0A5A7V999 (Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00220 PE=4 SV=1) HSP 1 Score: 716.8 bits (1849), Expect = 4.5e-203 Identity = 353/365 (96.71%), Postives = 359/365 (98.36%), Query Frame = 0
BLAST of Chy3G056420 vs. ExPASy TrEMBL
Match: A0A1S3BCG6 (protein RKD2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488516 PE=4 SV=1) HSP 1 Score: 716.8 bits (1849), Expect = 4.5e-203 Identity = 353/365 (96.71%), Postives = 359/365 (98.36%), Query Frame = 0
BLAST of Chy3G056420 vs. ExPASy TrEMBL
Match: A0A1S3BCY1 (uncharacterized protein LOC103488516 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488516 PE=4 SV=1) HSP 1 Score: 710.3 bits (1832), Expect = 4.2e-201 Identity = 352/365 (96.44%), Postives = 358/365 (98.08%), Query Frame = 0
BLAST of Chy3G056420 vs. ExPASy TrEMBL
Match: A0A6J1KR66 (uncharacterized protein LOC111496477 OS=Cucurbita maxima OX=3661 GN=LOC111496477 PE=4 SV=1) HSP 1 Score: 566.6 bits (1459), Expect = 7.5e-158 Identity = 295/363 (81.27%), Postives = 317/363 (87.33%), Query Frame = 0
BLAST of Chy3G056420 vs. ExPASy TrEMBL
Match: A0A6J1GK73 (uncharacterized protein LOC111454636 OS=Cucurbita moschata OX=3662 GN=LOC111454636 PE=4 SV=1) HSP 1 Score: 564.7 bits (1454), Expect = 2.8e-157 Identity = 293/361 (81.16%), Postives = 314/361 (86.98%), Query Frame = 0
BLAST of Chy3G056420 vs. NCBI nr
Match: KAE8647226.1 (hypothetical protein Csa_019049 [Cucumis sativus]) HSP 1 Score: 729 bits (1881), Expect = 4.34e-265 Identity = 360/365 (98.63%), Postives = 362/365 (99.18%), Query Frame = 0
BLAST of Chy3G056420 vs. NCBI nr
Match: XP_008445526.1 (PREDICTED: protein RKD2-like isoform X1 [Cucumis melo] >KAA0064713.1 protein RKD2-like isoform X1 [Cucumis melo var. makuwa] >TYK00732.1 protein RKD2-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 709 bits (1829), Expect = 4.42e-257 Identity = 353/365 (96.71%), Postives = 359/365 (98.36%), Query Frame = 0
BLAST of Chy3G056420 vs. NCBI nr
Match: XP_008445527.1 (PREDICTED: uncharacterized protein LOC103488516 isoform X2 [Cucumis melo]) HSP 1 Score: 702 bits (1813), Expect = 1.17e-254 Identity = 352/365 (96.44%), Postives = 358/365 (98.08%), Query Frame = 0
BLAST of Chy3G056420 vs. NCBI nr
Match: XP_023537902.1 (uncharacterized protein LOC111798799 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 564 bits (1453), Expect = 8.35e-200 Identity = 296/361 (81.99%), Postives = 316/361 (87.53%), Query Frame = 0
BLAST of Chy3G056420 vs. NCBI nr
Match: XP_023002694.1 (uncharacterized protein LOC111496477 [Cucurbita maxima]) HSP 1 Score: 558 bits (1439), Expect = 1.21e-197 Identity = 295/363 (81.27%), Postives = 317/363 (87.33%), Query Frame = 0
BLAST of Chy3G056420 vs. TAIR 10
Match: AT1G18790.1 (RWP-RK domain-containing protein ) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-07 Identity = 23/72 (31.94%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of Chy3G056420 vs. TAIR 10
Match: AT4G24020.1 (NIN like protein 7 ) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-07 Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of Chy3G056420 vs. TAIR 10
Match: AT3G59580.1 (Plant regulator RWP-RK family protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.8e-07 Identity = 23/64 (35.94%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of Chy3G056420 vs. TAIR 10
Match: AT3G59580.2 (Plant regulator RWP-RK family protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.8e-07 Identity = 23/64 (35.94%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of Chy3G056420 vs. TAIR 10
Match: AT1G20640.1 (Plant regulator RWP-RK family protein ) HSP 1 Score: 52.8 bits (125), Expect = 7.0e-07 Identity = 25/78 (32.05%), Postives = 47/78 (60.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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