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Chy3G055470 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGGATACCAATTGAAAGCATTCCCAGTGACGTTTGCTGGAACTAACCTTTGTGCAATGGAAGATGAAGTTTGGAAGAAAACTGATACATACATATTCATGCTTCAAGAGACTGGAGAGACGTGAAGATGATGTAATGCTTCCTCCAACTCCTCATTGTGGCCACATGTTTAAATAATTATATTATCCATGTTTATTTTTTGAGCTTAACTTTTACAAGCTTGCTCACCTTAACCCTATCTTAACTTTTATCTCATTGAAAAATCACAATTTCATGTAAAATTAACGATGGAAGTTATTTCCCATTACAGTATCCAATTTTTGCTATTGGTCATTGAAGAGCATTCATGTTCAAGAGCTCAACGTGAAGAAACTAGGGGTCTTGATCTACCCAGCCTATTGAATCAGTCTTATAATTCTCATCAAGTCAAGCCATTCACTAACAAAGCTGCCAAGACATGCTTAAATAGTGGAAATATAGCGAGTTCATTGAGGTGCTGTAAATGGGTTCAAAGCATGCTGGCTGGGAGAAGGATAAGCTGTGTTCTGTAATTCCAACACTACAACAAACTTGGTGATACCGCGTGTTTCTACTTGAAGGGTGAGGGGTTTTAGTTTTAGTTTCCTTTGTTGATACATAGTACAACCCACTGATTATTTATTCTTTGACTTAAATATTCATAAATTATATGATCTGATTCTAATTGAAAATAGGTCAAGAACTGACCATACAATTGACAAATATTTTGATGATCAAAAGGTCACTTTGGTGCTAATAACTTTGTAAAAATGATACTATAGTATGAGAAAGATCGTATTGTATTAAAAAAATCTTATTGATGCATATACCCTTTTCTATTCCATGCATCCTCAGTAAGATAATTATCTGGTTTTTTGATGTAACTAGTTTGTTACTGTTTATTAGTTAGTTTGTTACTGTTTATTAGTTTGTTACTGCTGTTAGTTTGTTACTGCTGTTTGCTTTACTCTTAGTTTTTGTGGACCATTGGGTTTAATATAAAAACCCCAGTTTGTTAGATTTTAAGAAAATAATAAGAATTTTTCCAGAAAAAGACTTCAGTCTTCTTGAGTTACCCAGTCCAAGAACTTGGGCTTACACCATTTTTCTTTTAAATGCTCTGATTCTTTCGAGGGTCTTTGTAAGCTCTTGTTCCTCTCATAGGTTTGATTACTAATAGTAGAAAAGACGTAGTCGATTTTGTGTTACTGGGGATATAAACTAAAACATAAATCGATGGATGACTTGCACTGAACAGACTGTTCTCTCCATCAAAAGCTTTTTGTTCCAAAGTAGCTCTCAGGATAGCTCATCTGCACAATGCAACGGACCAGTTTGTCTTCTAGACTAGTAGCAGCATGTCTATAGAGCAAGCATTGGATCCTGAGTCATCATCTTGGTGTGAAGAAATAGGTCCAAGCTGTTGCACATATTGTGTATATTTATGCTTGGCGGGGGGGGGGGGGCATGTGCTTCCACCTGCTATTCAATATATCTAAAATGCTGCAATGTACTTCCTTCTCAATTCAGTTGCCATCCAGGTAATAAAGATCAAAGACAGAGAGAATAGGGAAGTGCCTGACACTGGTATGTCAAAGAAATTAGTGACAAACAACATGG ATGGTGGGATACCAATTGAAAGCATTCCCAGTGACGTTTGCTGGAACTAACCTTTGTGCAATGGAAGATGAAGTTTGGAAGAAAACTGATACATACATATTCATGCTTCAAGAGACTGGAGAGACTAGCTCTCAGGATAGCTCATCTGCACAATGCAACGGACCAGTTTGTCTTCTAGACTAGTAGCAGCATGTCTATAGAGCAAGCATTGGATCCTGAGTCATCATCTTGGTGTGAAGAAATAGGGAAGTGCCTGACACTGGTATGTCAAAGAAATTAGTGACAAACAACATGG ATGGTGGGATACCAATTGAAAGCATTCCCAGTGACGTTTGCTGGAACTAACCTTTGTGCAATGGAAGATGAAGTTTGGAAGAAAACTGATACATACATATTCATGCTTCAAGAGACTGGAGAGACTAGCTCTCAGGATAGCTCATCTGCACAATGCAACGGACCAGTTTGTCTTCTAGACTAGTAGCAGCATGTCTATAGAGCAAGCATTGGATCCTGAGTCATCATCTTGGTGTGAAGAAATAGGGAAGTGCCTGACACTGGTATGTCAAAGAAATTAGTGACAAACAACATGG MVGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGETSSQDSSSAQCNGPVCLLD**QHVYRASIGS*VIILV*RNREVPDTGMSKKLVTNNMX Homology
BLAST of Chy3G055470 vs. ExPASy TrEMBL
Match: A0A5D3DK49 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001070 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 9.4e-15 Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 0
BLAST of Chy3G055470 vs. ExPASy TrEMBL
Match: A0A4S4ER28 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_029950 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.2e-04 Identity = 23/45 (51.11%), Postives = 35/45 (77.78%), Query Frame = 0
BLAST of Chy3G055470 vs. NCBI nr
Match: TYK23780.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 89.0 bits (219), Expect = 4.68e-18 Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 0
BLAST of Chy3G055470 vs. NCBI nr
Match: XP_028060015.1 (uncharacterized protein LOC114263643 [Camellia sinensis]) HSP 1 Score: 55.5 bits (132), Expect = 4.59e-07 Identity = 23/52 (44.23%), Postives = 35/52 (67.31%), Query Frame = 0
BLAST of Chy3G055470 vs. NCBI nr
Match: XP_028060025.1 (uncharacterized protein LOC114263646 [Camellia sinensis]) HSP 1 Score: 55.5 bits (132), Expect = 2.03e-06 Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 0
BLAST of Chy3G055470 vs. NCBI nr
Match: THG18626.1 (hypothetical protein TEA_029950 [Camellia sinensis var. sinensis]) HSP 1 Score: 55.5 bits (132), Expect = 2.55e-06 Identity = 23/45 (51.11%), Postives = 35/45 (77.78%), Query Frame = 0
BLAST of Chy3G055470 vs. NCBI nr
Match: XP_028060023.1 (probable receptor-like serine/threonine-protein kinase At5g57670 isoform X1 [Camellia sinensis]) HSP 1 Score: 55.5 bits (132), Expect = 2.63e-06 Identity = 23/45 (51.11%), Postives = 35/45 (77.78%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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