Chy3G055080 (gene) Cucumber (hystrix) v1

Overview
NameChy3G055080
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH03: 7353852 .. 7354005 (+)
RNA-Seq ExpressionChy3G055080
SyntenyChy3G055080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTCCTCTTTTCGTCGCTGCCACCCTCCCTTCGTCCCCTGTTTTCCTCTTTTTGTCGCTGCACACCTGCTCGTCGTCGGAAGCAATCGTCCCCTCTCTTTCACACCACTCGCCTCCCCTGCTCGCCGCCCCATTTGCCTCTGCCCTCCAA

mRNA sequence

ATGTTTTCCTCTTTTCGTCGCTGCCACCCTCCCTTCGTCCCCTGTTTTCCTCTTTTTGTCGCTGCACACCTGCTCGTCGTCGGAAGCAATCGTCCCCTCTCTTTCACACCACTCGCCTCCCCTGCTCGCCGCCCCATTTGCCTCTGCCCTCCAA

Coding sequence (CDS)

ATGTTTTCCTCTTTTCGTCGCTGCCACCCTCCCTTCGTCCCCTGTTTTCCTCTTTTTGTCGCTGCACACCTGCTCGTCGTCGGAAGCAATCGTCCCCTCTCTTTCACACCACTCGCCTCCCCTGCTCGCCGCCCCATTTGCCTCTGCCCTCCAA

Protein sequence

MFSSFRRCHPPFVPCFPLFVAAHLLVVGSNRPLSFTPLASPARRPICLCPPX
Homology
[Close]
BLAST of Chy3G055080 vs. NCBI nr
Match: KGN56343.2 (hypothetical protein Csa_011012 [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 2.16e-13
Identity = 33/46 (71.74%), Postives = 33/46 (71.74%), Query Frame = 0 

Query: 5  FRRCHPPFVPCFPLFVAAHLLVVGSNRPLSFTPLASPARRPICLCP 50
          FRRCHP FV CF LFV A  L VGSN  L FT L SPARRPICL P
Sbjct: 36 FRRCHPSFVSCFSLFVLARTLAVGSNYSLLFTQLTSPARRPICLYP 81

The following BLAST results are available for this feature:
BLAST of Chy3G055080 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G055080 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G055080 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56343.22.16e-1371.74hypothetical protein Csa_011012 [Cucumis sativus][more]
BLAST of Chy3G055080 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G055080.1Chy3G055080.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor