Chy3G053320 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTTTCTTCATCTGGGTGGTGGTCGGCAACAAAACAGCCAGAACTATCGCTAGACCATCACGGGAAAGCGAAAATCCAGATATGGGGGCTCTCGGAAGCAAGGAGAAGTATTTCTATGGAAGAAGAAGTTTGGGTTCAAGAGAGTTTGAAGAGAACAAACGAACGGTCCCCAGCTGCCCCGATCCTCTGCATAACTAG ATGCTTTTCTTCATCTGGGTGGTGGTCGGCAACAAAACAGCCAGAACTATCGCTAGACCATCACGGGAAAGCGAAAATCCAGATATGGGGGCTCTCGGAAGCAAGGAGAAGTATTTCTATGGAAGAAGAAGTTTGGGTTCAAGAGAGTTTGAAGAGAACAAACGAACGGTCCCCAGCTGCCCCGATCCTCTGCATAACTAG ATGCTTTTCTTCATCTGGGTGGTGGTCGGCAACAAAACAGCCAGAACTATCGCTAGACCATCACGGGAAAGCGAAAATCCAGATATGGGGGCTCTCGGAAGCAAGGAGAAGTATTTCTATGGAAGAAGAAGTTTGGGTTCAAGAGAGTTTGAAGAGAACAAACGAACGGTCCCCAGCTGCCCCGATCCTCTGCATAACTAG MLFFIWVVVGNKTARTIARPSRESENPDMGALGSKEKYFYGRRSLGSREFEENKRTVPSCPDPLHN* Homology
BLAST of Chy3G053320 vs. ExPASy TrEMBL
Match: A0A5A7VDX3 (Putative Clavata3/esr-related 43 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00690 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 6.4e-23 Identity = 55/66 (83.33%), Postives = 59/66 (89.39%), Query Frame = 0
BLAST of Chy3G053320 vs. NCBI nr
Match: KAA0063931.1 (putative Clavata3/esr-related 43 [Cucumis melo var. makuwa]) HSP 1 Score: 116 bits (290), Expect = 4.18e-32 Identity = 55/66 (83.33%), Postives = 59/66 (89.39%), Query Frame = 0
BLAST of Chy3G053320 vs. NCBI nr
Match: KAG7016789.1 (hypothetical protein SDJN02_21899, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 70.5 bits (171), Expect = 7.34e-14 Identity = 40/75 (53.33%), Postives = 48/75 (64.00%), Query Frame = 0
BLAST of Chy3G053320 vs. NCBI nr
Match: KAG6579278.1 (CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 70.5 bits (171), Expect = 8.56e-14 Identity = 40/75 (53.33%), Postives = 48/75 (64.00%), Query Frame = 0
BLAST of Chy3G053320 vs. NCBI nr
Match: KAG6601785.1 (CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032500.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 57.4 bits (137), Expect = 8.92e-09 Identity = 36/74 (48.65%), Postives = 41/74 (55.41%), Query Frame = 0
BLAST of Chy3G053320 vs. NCBI nr
Match: XP_019059276.1 (PREDICTED: CLAVATA3/ESR (CLE)-related protein 27 [Tarenaya hassleriana]) HSP 1 Score: 50.4 bits (119), Expect = 1.57e-05 Identity = 30/72 (41.67%), Postives = 36/72 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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