Chy3G053200 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G053200
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH03: 4392200 .. 4392823 (-)
RNA-Seq Expression	Chy3G053200
Synteny	Chy3G053200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGAGCAGTACAGGGAGAACATTCACTATATGTACGATGTCCCTATTGTACCTTCTCCAGTCCAAAGGAGACGTGCTCGAGGACAAAAGCCTGATCAATTGGAAGAAGTTGACCAACACGTGGAAGAAGTGCCTCCCATGACACAGACACAGAGCGAGCATGGTTACGTTAGTCCAATAATGATGATGCCAGCATTTGGAATGACATATCATGATTCAGGAGTCGGTCAATCACCAGACTTTGGAATAAGATATTATAATTTAGAGGCAGGTCCATCATCATCAAACTTTGGGCAACAATACTATGATTTAGGAAGCGATCCATCATCTTCATACATGCATGGTCACGGGCGCGGTCGTGGAGAACATAATGAACATTTGTACTACGAAGTGCCTGCAGCAGTACCCGAGCAACTAGATGAGCAACAACAACATGAGAATCAGGAAGAAATACAACAACAAAGAGTTCAGAGTCGACGACGACAACCAGTTAGAAATCGTCGACATCCAGGTTGTGGAAAACATTGATTTTTTTTTTTCATTGAATGAAAATTGCTAAATTATTGTATTAGACATTTTGTTCCATCTTTTAATTATTTTTCAATCAAAAGCACTTACTACAA

mRNA sequence

AAACGAGCAGTACAGGGAGAACATTCACTATATGTACGATGTCCCTATTGTACCTTCTCCAGTCCAAAGGAGACGTGCTCGAGGACAAAAGCCTGATCAATTGGAAGAAGTTGACCAACACGTGGAAGAAGTGCCTCCCATGACACAGACACAGAGCGAGCATGGTTACGTTAGTCCAATAATGATGATGCCAGCATTTGGAATGACATATCATGATTCAGGAGTCGGTCAATCACCAGACTTTGGAATAAGATATTATAATTTAGAGGCAGGTCCATCATCATCAAACTTTGGGCAACAATACTATGATTTAGGAAGCGATCCATCATCTTCATACATGCATGGTCACGGGCGCGGTCGTGGAGAACATAATGAACATTTGTACTACGAAGTGCCTGCAGCAGTACCCGAGCAACTAGATGAGCAACAACAACATGAGAATCAGGAAGAAATACAACAACAAAGAGTTCAGAGTCGACGACGACAACCAGTTAGAAATCGTCGACATCCAGGTTGTGGAAAACATTGATTTTTTTTTTTCATTGAATGAAAATTGCTAAATTATTGTATTAGACATTTTGTTCCATCTTTTAATTATTTTTCAATCAAAAGCACTTACTACAA

Coding sequence (CDS)

AAACGAGCAGTACAGGGAGAACATTCACTATATGTACGATGTCCCTATTGTACCTTCTCCAGTCCAAAGGAGACGTGCTCGAGGACAAAAGCCTGATCAATTGGAAGAAGTTGACCAACACGTGGAAGAAGTGCCTCCCATGACACAGACACAGAGCGAGCATGGTTACGTTAGTCCAATAATGATGATGCCAGCATTTGGAATGACATATCATGATTCAGGAGTCGGTCAATCACCAGACTTTGGAATAAGATATTATAATTTAGAGGCAGGTCCATCATCATCAAACTTTGGGCAACAATACTATGATTTAGGAAGCGATCCATCATCTTCATACATGCATGGTCACGGGCGCGGTCGTGGAGAACATAATGAACATTTGTACTACGAAGTGCCTGCAGCAGTACCCGAGCAACTAGATGAGCAACAACAACATGAGAATCAGGAAGAAATACAACAACAAAGAGTTCAGAGTCGACGACGACAACCAGTTAGAAATCGTCGACATCCAGGTTGTGGAAAACATTGATTTTTTTTTTTCATTGAATGAAAATTGCTAAATTATTGTATTAGACATTTTGTTCCATCTTTTAATTATTTTTCAATCAAAAGCACTTACTACAA

Protein sequence

KRAVQGEHSLYVRCPYCTFSSPKETCSRTKA*SIGRS*PTRGRSASHDTDTERAWLR*SNNDDASIWNDIS*FRSRSITRLWNKIL*FRGRSIIIKLWATIL*FRKRSIIFIHAWSRARSWRT**TFVLRSACSSTRATR*ATTT*ESGRNTTTKSSESTTTTS*KSSTSRLWKTLIFFFH*MKIAKLLY*TFCSIF*LFFNQKHLLQ

Homology

The following BLAST results are available for this feature:

BLAST of Chy3G053200 vs.


Match Name	E-value	Identity	Description

BLAST of Chy3G053200 vs.


Match Name	E-value	Identity	Description

BLAST of Chy3G053200 vs.


Match Name	E-value	Identity	Description

BLAST of Chy3G053200 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G053200.1	Chy3G053200.1	mRNA