Chy3G052990 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G052990
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Copper-binding periplasmic protein
Location	chrH03: 3706348 .. 3707112 (-)
RNA-Seq Expression	Chy3G052990
Synteny	Chy3G052990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAATGGCGATCGATGTTTGCTCTGAGATTTCCACTGTAGGAATCAGTCCCAGAATCTCATTTTCACATGATCTGAATCAAACCGATTTGTTGCCTTCTTCTAATTGTGATCGTGATCGCGATCGTTTGGATTTGAGTCTTCTCGAATCCGATTTCGATTTCTGCATTGGTAACCTTCTTCTCCAAGATCTTTCCTCCGCCGATGAACTCTTCTCCAATGGCAAAATCCTCCCCAAATCCATCGAGCCAAACAGACAACTTCTAAGTAAACCTAATCAATCCCATCGTCTAATTCCTCCGATTCCTCCCGATCCTTCCAGAAACTCAGTCTCCTCCGAGAAGAAGAGCCTTAAAGAGCTTCTATCCGCCAGTTTCGATGGCGATGAGAAACCGCAATCCAAATCCTTCTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAAGCTCAAAGAGTAGAGGTTTGATTCGATCCTTGCATTTTCTGTCCAGAAGCAATTCAACTGGTTCGGTTTTGAATCCGAAACAGCAATCGAATTCGAAGGATTCTCAAAGACCGAATTTGCAGAAACAAGCTTCGATTTCAAGTAGTAGAAGATCATCTTCATCCTCATCTTCATCGTCTTTCTCCAACTCCTATTTTGCAAACACGTGTTCTCAAAAGCCTTCAATGAGGAAGAATTTTGGATGGAACAATGGGAATGGAGTTGGAATTAGTAGTCCTCTTCTCAATCTCCCTCCGCCGTACATTTCCAAAGTAACT

mRNA sequence

ATGCTAATGGCGATCGATGTTTGCTCTGAGATTTCCACTGTAGGAATCAGTCCCAGAATCTCATTTTCACATGATCTGAATCAAACCGATTTGTTGCCTTCTTCTAATTGTGATCGTGATCGCGATCGTTTGGATTTGAGTCTTCTCGAATCCGATTTCGATTTCTGCATTGGTAACCTTCTTCTCCAAGATCTTTCCTCCGCCGATGAACTCTTCTCCAATGGCAAAATCCTCCCCAAATCCATCGAGCCAAACAGACAACTTCTAAGTAAACCTAATCAATCCCATCGTCTAATTCCTCCGATTCCTCCCGATCCTTCCAGAAACTCAGTCTCCTCCGAGAAGAAGAGCCTTAAAGAGCTTCTATCCGCCAGTTTCGATGGCGATGAGAAACCGCAATCCAAATCCTTCTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAAGCTCAAAGAGTAGAGGTTTGATTCGATCCTTGCATTTTCTGTCCAGAAGCAATTCAACTGGTTCGGTTTTGAATCCGAAACAGCAATCGAATTCGAAGGATTCTCAAAGACCGAATTTGCAGAAACAAGCTTCGATTTCAAGTAGTAGAAGATCATCTTCATCCTCATCTTCATCGTCTTTCTCCAACTCCTATTTTGCAAACACGTGTTCTCAAAAGCCTTCAATGAGGAAGAATTTTGGATGGAACAATGGGAATGGAGTTGGAATTAGTAGTCCTCTTCTCAATCTCCCTCCGCCGTACATTTCCAAAGTAACT

Coding sequence (CDS)

ATGCTAATGGCGATCGATGTTTGCTCTGAGATTTCCACTGTAGGAATCAGTCCCAGAATCTCATTTTCACATGATCTGAATCAAACCGATTTGTTGCCTTCTTCTAATTGTGATCGTGATCGCGATCGTTTGGATTTGAGTCTTCTCGAATCCGATTTCGATTTCTGCATTGGTAACCTTCTTCTCCAAGATCTTTCCTCCGCCGATGAACTCTTCTCCAATGGCAAAATCCTCCCCAAATCCATCGAGCCAAACAGACAACTTCTAAGTAAACCTAATCAATCCCATCGTCTAATTCCTCCGATTCCTCCCGATCCTTCCAGAAACTCAGTCTCCTCCGAGAAGAAGAGCCTTAAAGAGCTTCTATCCGCCAGTTTCGATGGCGATGAGAAACCGCAATCCAAATCCTTCTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAAGCTCAAAGAGTAGAGGTTTGATTCGATCCTTGCATTTTCTGTCCAGAAGCAATTCAACTGGTTCGGTTTTGAATCCGAAACAGCAATCGAATTCGAAGGATTCTCAAAGACCGAATTTGCAGAAACAAGCTTCGATTTCAAGTAGTAGAAGATCATCTTCATCCTCATCTTCATCGTCTTTCTCCAACTCCTATTTTGCAAACACGTGTTCTCAAAAGCCTTCAATGAGGAAGAATTTTGGATGGAACAATGGGAATGGAGTTGGAATTAGTAGTCCTCTTCTCAATCTCCCTCCGCCGTACATTTCCAAAGTAACT

Protein sequence

MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLLQDLSSADELFSNGKILPKSIEPNRQLLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKELLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSNSKDSQRPNLQKQASISSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGISSPLLNLPPPYISKVT

Homology

[Close]

BLAST of Chy3G052990 vs. ExPASy TrEMBL
Match: A0A0A0KAS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G027440 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 4.3e-128
Identity = 249/255 (97.65%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60
           MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL
Sbjct: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60

Query: 61  LLQDLSSADELFSNGKILPKSIEPNRQLLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE 120
           LLQDLSSADELFSNGKILPKSI+PNRQLLSKPN+SHRLIPPIPPDPSRNSVSSEKKSLKE
Sbjct: 61  LLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKE 120

Query: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180
           LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN
Sbjct: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180

Query: 181 SKDSQRPNLQKQASISSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGIS 240
           SKD QRPNLQKQ S SSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVG S
Sbjct: 181 SKDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSS 240

Query: 241 SPLLNLPPPYISKVT 256
           SPLLNLPPPYISKVT
Sbjct: 241 SPLLNLPPPYISKVT 255

[Close]

BLAST of Chy3G052990 vs. ExPASy TrEMBL
Match: A0A5D3BPP8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00020 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.7e-124
Identity = 249/257 (96.89%), Postives = 251/257 (97.67%), Query Frame = 0


Query: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60
           MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL
Sbjct: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60

Query: 61  LLQDLSSADELFSNGKILPKSIEPNRQLLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE 120
           LLQDLSSADELFSNGKILPKSIEPNRQ+LSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE
Sbjct: 61  LLQDLSSADELFSNGKILPKSIEPNRQVLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE 120

Query: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180
           LLSASFDG+EK QSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGSVLNPKQQSN
Sbjct: 121 LLSASFDGEEKQQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSVLNPKQQSN 180

Query: 181 SKDSQRPNLQKQASISSSRRSSSSSSSS-SFSNSYFANTCSQKPSMRKNFGWNNGNGVGI 240
           SKD QRPNLQKQASISSSRRSSSSSSSS SFSNSYFANTCSQK SMRKNFGWNNGNGVGI
Sbjct: 181 SKDCQRPNLQKQASISSSRRSSSSSSSSTSFSNSYFANTCSQKHSMRKNFGWNNGNGVGI 240

Query: 241 -SSPLLNLPPPYISKVT 256
            SSPLLNLPPPYISKVT
Sbjct: 241 SSSPLLNLPPPYISKVT 257

[Close]

BLAST of Chy3G052990 vs. ExPASy TrEMBL
Match: A0A1S3BE16 (uncharacterized protein LOC103488594 OS=Cucumis melo OX=3656 GN=LOC103488594 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.7e-124
Identity = 249/257 (96.89%), Postives = 251/257 (97.67%), Query Frame = 0


Query: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60
           MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL
Sbjct: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60

Query: 61  LLQDLSSADELFSNGKILPKSIEPNRQLLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE 120
           LLQDLSSADELFSNGKILPKSIEPNRQ+LSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE
Sbjct: 61  LLQDLSSADELFSNGKILPKSIEPNRQVLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE 120

Query: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180
           LLSASFDG+EK QSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGSVLNPKQQSN
Sbjct: 121 LLSASFDGEEKQQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSVLNPKQQSN 180

Query: 181 SKDSQRPNLQKQASISSSRRSSSSSSSS-SFSNSYFANTCSQKPSMRKNFGWNNGNGVGI 240
           SKD QRPNLQKQASISSSRRSSSSSSSS SFSNSYFANTCSQK SMRKNFGWNNGNGVGI
Sbjct: 181 SKDCQRPNLQKQASISSSRRSSSSSSSSTSFSNSYFANTCSQKHSMRKNFGWNNGNGVGI 240

Query: 241 -SSPLLNLPPPYISKVT 256
            SSPLLNLPPPYISKVT
Sbjct: 241 SSSPLLNLPPPYISKVT 257

[Close]

BLAST of Chy3G052990 vs. ExPASy TrEMBL
Match: A0A6J1FKX8 (uncharacterized protein LOC111445167 OS=Cucurbita moschata OX=3662 GN=LOC111445167 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.5e-96
Identity = 214/257 (83.27%), Postives = 226/257 (87.94%), Query Frame = 0


Query: 3   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL 62
           MAI+VCSEISTVGISPRISFSHDLNQ DLLPSS+ D +R+RLDL+LLESDFDFCIGNLL 
Sbjct: 1   MAIEVCSEISTVGISPRISFSHDLNQADLLPSSS-DCNRERLDLTLLESDFDFCIGNLLR 60

Query: 63  QDLSSADELFSNGKILP----KSIEPNRQLLSKPNQSHRLIPPIPPDPSRNSVSSEKKSL 122
           QDLSSADELFSNGKILP    KSIEPNR++L KP QS    PP+PPDP+RNSVSSEKKSL
Sbjct: 61  QDLSSADELFSNGKILPVEIKKSIEPNREVL-KPIQSPP-PPPVPPDPARNSVSSEKKSL 120

Query: 123 KELLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQ 182
           KELLSASFD DEKPQSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGS LNPK Q
Sbjct: 121 KELLSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQ 180

Query: 183 SNSKDSQRPNLQKQASISSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVG 242
           S SKD QRPNLQKQ SISSSRRSS+S S+S  +NSYFAN  SQKPSMRKN G NNGNGV 
Sbjct: 181 STSKDPQRPNLQKQPSISSSRRSSTSISTS--ANSYFANLSSQKPSMRKNSGPNNGNGVR 240

Query: 243 ISSPLLNLPPPYISKVT 256
           I SP LNLPPPYISKVT
Sbjct: 241 I-SPFLNLPPPYISKVT 251

[Close]

BLAST of Chy3G052990 vs. ExPASy TrEMBL
Match: A0A6J1JSG5 (uncharacterized protein LOC111489360 OS=Cucurbita maxima OX=3661 GN=LOC111489360 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.1e-94
Identity = 210/257 (81.71%), Postives = 224/257 (87.16%), Query Frame = 0


Query: 3   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL 62
           MAI+VCSEISTVGISPRISFSHDLNQ DLLPSS+ D +R+RLDL+LLESDFDFCIGNLL 
Sbjct: 1   MAIEVCSEISTVGISPRISFSHDLNQADLLPSSS-DCNRERLDLTLLESDFDFCIGNLLR 60

Query: 63  QDLSSADELFSNGKILP----KSIEPNRQLLSKPNQSHRLIPPIPPDPSRNSVSSEKKSL 122
           QDLSSADELFSNGKILP    KSIEPNR+ L KP QS    P +PPDP+RNSVSSEKKSL
Sbjct: 61  QDLSSADELFSNGKILPIEIKKSIEPNREFL-KPIQSPP-PPLVPPDPARNSVSSEKKSL 120

Query: 123 KELLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQ 182
           KELLSASFD DEKPQSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGS LNPK Q
Sbjct: 121 KELLSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQ 180

Query: 183 SNSKDSQRPNLQKQASISSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVG 242
           S SKD QRPN+QKQ SISSSRRSS+S S+S  +NSYFAN  +QKPS+RKN G NNGNGV 
Sbjct: 181 STSKDPQRPNMQKQPSISSSRRSSTSISTS--ANSYFANLSTQKPSVRKNSGPNNGNGVR 240

Query: 243 ISSPLLNLPPPYISKVT 256
           I SP LNLPPPYISKVT
Sbjct: 241 I-SPFLNLPPPYISKVT 251

[Close]

BLAST of Chy3G052990 vs. NCBI nr
Match: XP_004151494.1 (uncharacterized protein LOC101215559 [Cucumis sativus])

HSP 1 Score: 466 bits (1198), Expect = 2.19e-164
Identity = 249/255 (97.65%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60
           MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL
Sbjct: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60

Query: 61  LLQDLSSADELFSNGKILPKSIEPNRQLLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE 120
           LLQDLSSADELFSNGKILPKSI+PNRQLLSKPN+SHRLIPPIPPDPSRNSVSSEKKSLKE
Sbjct: 61  LLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKE 120

Query: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180
           LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN
Sbjct: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180

Query: 181 SKDSQRPNLQKQASISSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGIS 240
           SKD QRPNLQKQ S SSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVG S
Sbjct: 181 SKDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSS 240

Query: 241 SPLLNLPPPYISKVT 255
           SPLLNLPPPYISKVT
Sbjct: 241 SPLLNLPPPYISKVT 255

[Close]

BLAST of Chy3G052990 vs. NCBI nr
Match: XP_008445637.1 (PREDICTED: uncharacterized protein LOC103488594 [Cucumis melo])

HSP 1 Score: 454 bits (1167), Expect = 1.25e-159
Identity = 249/257 (96.89%), Postives = 251/257 (97.67%), Query Frame = 0


Query: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60
           MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL
Sbjct: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60

Query: 61  LLQDLSSADELFSNGKILPKSIEPNRQLLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE 120
           LLQDLSSADELFSNGKILPKSIEPNRQ+LSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE
Sbjct: 61  LLQDLSSADELFSNGKILPKSIEPNRQVLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE 120

Query: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180
           LLSASFDG+EK QSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGSVLNPKQQSN
Sbjct: 121 LLSASFDGEEKQQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSVLNPKQQSN 180

Query: 181 SKDSQRPNLQKQASISSSRRSSSSSSSS-SFSNSYFANTCSQKPSMRKNFGWNNGNGVGI 240
           SKD QRPNLQKQASISSSRRSSSSSSSS SFSNSYFANTCSQK SMRKNFGWNNGNGVGI
Sbjct: 181 SKDCQRPNLQKQASISSSRRSSSSSSSSTSFSNSYFANTCSQKHSMRKNFGWNNGNGVGI 240

Query: 241 SS-PLLNLPPPYISKVT 255
           SS PLLNLPPPYISKVT
Sbjct: 241 SSSPLLNLPPPYISKVT 257

[Close]

BLAST of Chy3G052990 vs. NCBI nr
Match: KAA0043504.1 (uncharacterized protein E6C27_scaffold43056G00050 [Cucumis melo var. makuwa] >TYK01135.1 uncharacterized protein E5676_scaffold109G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 454 bits (1167), Expect = 1.29e-159
Identity = 249/257 (96.89%), Postives = 251/257 (97.67%), Query Frame = 0


Query: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60
           MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL
Sbjct: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60

Query: 61  LLQDLSSADELFSNGKILPKSIEPNRQLLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE 120
           LLQDLSSADELFSNGKILPKSIEPNRQ+LSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE
Sbjct: 61  LLQDLSSADELFSNGKILPKSIEPNRQVLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE 120

Query: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180
           LLSASFDG+EK QSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGSVLNPKQQSN
Sbjct: 121 LLSASFDGEEKQQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSVLNPKQQSN 180

Query: 181 SKDSQRPNLQKQASISSSRRSSSSSSSS-SFSNSYFANTCSQKPSMRKNFGWNNGNGVGI 240
           SKD QRPNLQKQASISSSRRSSSSSSSS SFSNSYFANTCSQK SMRKNFGWNNGNGVGI
Sbjct: 181 SKDCQRPNLQKQASISSSRRSSSSSSSSTSFSNSYFANTCSQKHSMRKNFGWNNGNGVGI 240

Query: 241 SS-PLLNLPPPYISKVT 255
           SS PLLNLPPPYISKVT
Sbjct: 241 SSSPLLNLPPPYISKVT 257

[Close]

BLAST of Chy3G052990 vs. NCBI nr
Match: KGN45940.2 (hypothetical protein Csa_005269 [Cucumis sativus])

HSP 1 Score: 452 bits (1162), Expect = 1.84e-158
Identity = 241/248 (97.18%), Postives = 244/248 (98.39%), Query Frame = 0


Query: 3   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL 62
           MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL
Sbjct: 1   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL 60

Query: 63  QDLSSADELFSNGKILPKSIEPNRQLLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKELL 122
           QDLSSADELFSNGKILPKSI+PNRQLLSKPN+SHRLIPPIPPDPSRNSVSSEKKSLKELL
Sbjct: 61  QDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKELL 120

Query: 123 SASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSNSK 182
           SASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSNSK
Sbjct: 121 SASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSNSK 180

Query: 183 DSQRPNLQKQASISSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGISSP 242
           D QRPNLQKQ S SSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVG SSP
Sbjct: 181 DCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSSSP 240

Query: 243 LLNLPPPY 250
           LLNLPPP+
Sbjct: 241 LLNLPPPF 248

[Close]

BLAST of Chy3G052990 vs. NCBI nr
Match: XP_038886056.1 (uncharacterized protein LOC120076333 [Benincasa hispida])

HSP 1 Score: 401 bits (1030), Expect = 6.41e-139
Identity = 229/253 (90.51%), Postives = 235/253 (92.89%), Query Frame = 0


Query: 3   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL 62
           MAIDVCSEISTVGISPRISFSHDLNQTD LPSSN DRDR  LDLSLLESDFDFCIGNLL 
Sbjct: 1   MAIDVCSEISTVGISPRISFSHDLNQTDSLPSSNFDRDR--LDLSLLESDFDFCIGNLLR 60

Query: 63  QDLSSADELFSNGKILPKSIEPNRQLLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKELL 122
           QDLSSADELFSNGKILPKSIEPNR++L KPNQS  LIPPIPPDPSRNSVSSEKKSLKELL
Sbjct: 61  QDLSSADELFSNGKILPKSIEPNREIL-KPNQSPPLIPPIPPDPSRNSVSSEKKSLKELL 120

Query: 123 SASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSNSK 182
           SASFDGDEKPQSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGS LNPKQQS SK
Sbjct: 121 SASFDGDEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSTLNPKQQSVSK 180

Query: 183 DSQRPNLQKQASISSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGISSP 242
           +  RPNLQKQASISSSRRS+SSSSSSSFSNSYF N+CSQKPS+RKN G NNGNGV IS P
Sbjct: 181 E--RPNLQKQASISSSRRSTSSSSSSSFSNSYFVNSCSQKPSIRKNLGPNNGNGVRIS-P 240

Query: 243 LLNLPPPYISKVT 255
           LLNLPPPYISKVT
Sbjct: 241 LLNLPPPYISKVT 247

[Close]

BLAST of Chy3G052990 vs. TAIR 10
Match: AT1G68330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits to 147 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-26
Identity = 124/273 (45.42%), Postives = 150/273 (54.95%), Query Frame = 0


Query: 3   MAIDV-CSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLE--SDFDFCIG- 62
           MAIDV CSE S  GISPRISFS+DL+ T        D    RLD +LL+  S+FDFC G 
Sbjct: 1   MAIDVCCSEASGSGISPRISFSYDLDST--------DDGEVRLDSTLLDSGSEFDFCFGS 60

Query: 63  NLLLQDLSSADELFSNGKILPKSIEPNRQLLSKPNQSHRLIPPIPPDPSRNSVSS----- 122
           +  +Q++S ADELFS GKILP  I+    L   P      +P      S +S SS     
Sbjct: 61  SCSVQEVSPADELFSEGKILPVQIKKEESL---PQTVTFRVPRSASLSSSSSSSSSSSSS 120

Query: 123 -----EKKSLKE-LLSASFDGDEKPQSKSFWQFKRSSSLNCESSK-SRGLIRSLHFLSRS 182
                +K  LKE LL+   D ++KP+   F QFKRS SLN + S+ S+GLIRS HFLSRS
Sbjct: 121 SRAPEKKMRLKELLLNPESDFEDKPRG-LFLQFKRSISLNYDKSRNSKGLIRSFHFLSRS 180

Query: 183 NSTGSVLNPKQQSNSKDSQRP----NLQKQASISSSRRSSSSSSSSSFSNSYFANTCSQK 242
           NST    NP      K++  P    NL K       RRSSS SSSS           S+K
Sbjct: 181 NSTP---NPNLDLLPKETHHPHKTHNLPKHK--PPLRRSSSLSSSS-------VPFYSKK 240

Query: 243 PSMRKNFGWNNGNGVGISSPLLNLPPP-YISKV 255
           P  R +FG  NGNG    SP+LN PPP +IS V
Sbjct: 241 PLGRNSFG--NGNGGVRVSPVLNFPPPAFISNV 247

[Close]

BLAST of Chy3G052990 vs. TAIR 10
Match: AT1G67050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38320.1); Has 617 Blast hits to 318 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 141; Fungi - 62; Plants - 128; Viruses - 2; Other Eukaryotes - 268 (source: NCBI BLink). )

HSP 1 Score: 105.1 bits (261), Expect = 8.2e-23
Identity = 98/255 (38.43%), Postives = 135/255 (52.94%), Query Frame = 0


Query: 3   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLES--DFDFCI--- 62
           MA+D+ SE S   +SPRISFS D  Q+D +P             S L S  DFDFCI   
Sbjct: 1   MAVDLLSENS--NMSPRISFSRDFCQSDAIPIEKRPLRSSNSKPSSLNSSIDFDFCIPGG 60

Query: 63  ---GNLLLQDLSSADELFSNGKILPKSIEPNRQLLSKPNQSHRLIPPIPPDPSRNSVSSE 122
              G    Q   SADELFSNGKILP  I+       +P +      P+   P       +
Sbjct: 61  VNSGESFDQGSWSADELFSNGKILPTEIKKK----PEPGKKEPEPKPVKSKPDSRKQRKQ 120

Query: 123 KKSLKELLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLN 182
               ++        +EK  +KSFW FKRSSSLNC S+  R L   L  L+RSNSTGS  +
Sbjct: 121 PNEEQQEDDVIITTEEKTNTKSFWGFKRSSSLNCGSTYGRSLC-PLPLLNRSNSTGSTSS 180

Query: 183 PKQQSNS-KDSQRPNLQKQASISSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNN 242
            ++QS+S K ++   LQ+ +S+     SSSSS+SSS SN+ F+    +K     ++G + 
Sbjct: 181 KQKQSSSRKHNEHVKLQQSSSL-----SSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHG 240

Query: 243 GNGVGISSPLLNLPP 249
           G G+ + SP++N+ P
Sbjct: 241 GGGIRV-SPVINVVP 242

[Close]

BLAST of Chy3G052990 vs. TAIR 10
Match: AT1G48780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18300.1); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 5.7e-16
Identity = 76/173 (43.93%), Postives = 92/173 (53.18%), Query Frame = 0


Query: 19  RISFSHDLNQTD------LLPSSNCDRDRDRLDLSLLESDFDFCIGNLL-LQDLSSADEL 78
           RISFS DL Q+D      + PS    RD   LD S   SDF+F I N     D S ADE+
Sbjct: 9   RISFSSDLGQSDKAPPPVIEPSGLIRRDETLLDSS--NSDFEFHISNSFDPGDSSPADEI 68

Query: 79  FSNGKILP-----KSIEPNR-QLLSKPNQSHRLIP-PIPPDPSRNSVSSEKKSLKELLSA 138
           F++G ILP      S  P R      P  +  L P P+ P P      SEK++      A
Sbjct: 69  FADGMILPFHVTAASTVPKRLYKYELPPITSSLSPSPLSPQPLPTK-HSEKETNGRASGA 128

Query: 139 SFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQ 178
           + D + +  SKSFW FKRSSSLNC+  KS  LI S   L+RSNSTGSV N K+
Sbjct: 129 NSDSEAEKSSKSFWSFKRSSSLNCDIKKS--LICSFPRLTRSNSTGSVTNSKR 176

[Close]

BLAST of Chy3G052990 vs. TAIR 10
Match: AT3G18300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 69 Blast hits to 69 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 2.9e-12
Identity = 96/273 (35.16%), Postives = 121/273 (44.32%), Query Frame = 0


Query: 11  ISTVGISPRISFSHDLNQTD------LLPSSNCDRDRDRLDLSLLESDFDFCI-GNLLLQ 70
           I T     R SF+ DL Q+D        PS    RD   LD S   SDF+F I  N    
Sbjct: 2   ICTESNHQRFSFAGDLGQSDKGTPMEQQPSGPVRRDTTLLDSS--NSDFEFHISSNFDPG 61

Query: 71  DLSSADELFSNGKILP--------KSIEPNR-------QLLSKPNQSHRLIP---PIPPD 130
           D S ADE+F++G ILP         S  P R        ++S P  S  L P   P+P  
Sbjct: 62  DSSPADEIFADGMILPVLPFQVTATSTMPKRLYKYELPPIVSAPTLSSYLPPLPLPLPEH 121

Query: 131 PSRNSVSSEKKSLKELLS-ASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLS 190
             + SV   + SL    S A+ D + +  SKSFW FKRSSSLNC+  KS  LI S   L+
Sbjct: 122 SRKYSVKETRGSLNGRGSGANSDSEAEKSSKSFWSFKRSSSLNCDIKKS--LICSFPRLT 181

Query: 191 RSNSTGSVLNPKQQS----NSKDSQRPNLQKQASISSSRRSSSSSSSSSFSNSYFANTCS 250
           RSNSTGSV   K++     N   SQR  + +     SS     SS             CS
Sbjct: 182 RSNSTGSVAISKREMLRDINKHSSQRHGVPRPGVNPSSHMRPPSSF-----------CCS 241

The following BLAST results are available for this feature:

BLAST of Chy3G052990 vs.


Match Name	E-value	Identity	Description

BLAST of Chy3G052990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAS8	4.3e-128	97.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G027440 PE=4 SV=1	[more]
A0A5D3BPP8	1.7e-124	96.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BE16	1.7e-124	96.89	uncharacterized protein LOC103488594 OS=Cucumis melo OX=3656 GN=LOC103488594 PE=...	[more]
A0A6J1FKX8	1.5e-96	83.27	uncharacterized protein LOC111445167 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1JSG5	3.1e-94	81.71	uncharacterized protein LOC111489360 OS=Cucurbita maxima OX=3661 GN=LOC111489360...	[more]

BLAST of Chy3G052990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151494.1	2.19e-164	97.65	uncharacterized protein LOC101215559 [Cucumis sativus]	[more]
XP_008445637.1	1.25e-159	96.89	PREDICTED: uncharacterized protein LOC103488594 [Cucumis melo]	[more]
KAA0043504.1	1.29e-159	96.89	uncharacterized protein E6C27_scaffold43056G00050 [Cucumis melo var. makuwa] >TY...	[more]
KGN45940.2	1.84e-158	97.18	hypothetical protein Csa_005269 [Cucumis sativus]	[more]
XP_038886056.1	6.41e-139	90.51	uncharacterized protein LOC120076333 [Benincasa hispida]	[more]

BLAST of Chy3G052990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68330.1	1.6e-26	45.42	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G67050.1	8.2e-23	38.43	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G48780.1	5.7e-16	43.93	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G18300.1	2.9e-12	35.16	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..114
None	No IPR available	PANTHER	PTHR31722:SF33	COPPER-BINDING PERIPLASMIC PROTEIN	coord: 3..255
None	No IPR available	PANTHER	PTHR31722	OS06G0675200 PROTEIN	coord: 3..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G052990.1	Chy3G052990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071704	organic substance metabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0016985	mannan endo-1,4-beta-mannosidase activity