Chy3G051320 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G051320
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	GRF1-interacting factor 3-like
Location	chrH03: 1369264 .. 1370881 (-)
RNA-Seq Expression	Chy3G051320
Synteny	Chy3G051320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGGTTTCAACTGCATGCAGTATCTTGATGAGAACAAAAAGTTGATATTGGCCATACTGGACAACCAACATCTGGGGAAACTAGCTGAATGTGCTCAGTAAGTTACCCCTCTCTCTACACGTTGTTATGCGTGGTGTTGATTCTTGAAATGTTACATCCCAACACCAATGGAGCCCAGAAAGTTGCATTGATTATTATCTTATTGCCTGTGTTCTCATAATCTATAGTCCTAACTCCTAATAACGTAGGATTTTTAGGATGTGAAGAAGTCTAGCGAGATGGTTGGGAGTTGGTGAGGTTTAACACTTCTGTTTGGGAGTCTGTCACTGGACCATTTTGTAATTATAACATTTATCTTGTTCTTTTGGACTAAAATCCTTTGTTTGGTGAGTGTTGGATTCCTGTTTTTGGGGACGTTTTTTGTGCTTCTTGCTCTCTTGCATTTTTTCAATGAAAGTTCAGCTTCTTACCCAAAAAAAAAAAATAATAATAATAATAATTTACCATGCATGTTATTTAAAAGTAAGGATGGTGTATCTTGGTGTTTAAGAGCTGGAGGTGTCTATGGGTGCAGTTTAAATCTTGCTACCAATTATGCGTTTTTATAATTTGAAATCTAGATCTTTCATTTTCATTTTCGAGCATTTCTTATGTCTTTGTAATTTGAGCAATAGTCTCTTTTCATGAAAAGTGTTGTTTCCATTTAAAAATAAAATAAAACAGGCATGTGGACTTATTATGGATTTCTGTTCTTTATAATTGGGTATGTATTTCGGAATTGATACAATGTATTGTTTTTGTGAATATTTGGAGTCAAGGGTTACATAATCTACATCCTTTGCTGTCTCTATGCGCTTGTGTGGTTTTATGAACTACTGAAGTGTTGCATTTCCTAAAACTATTTTTCATACGTGACTTTCAATTTTCACAATATGATGCATTTTACTCAAGGACAATTTCATCCCTATCTACCTGTAGTGTGCACAATATTGTACCTGAGAGCTGAGAGTTAATTTGATTATTTAAATAGGTACCAAGCTCAACTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCACAGGCACCGGCCATGCCTCCACAGGTTGGTTAATAACTAGGCCTCAGTTTCTGCTAATTTCACAACAAAATATAGTCTGTCTTACATATGTTAGAATGGTCAGATGGCTCCCCATCCTGCTATGCAGCAAGGGGGTTATTATATGCAGCACCCTCAGGCAGCTATAATGGCTCAGCAATCGGGACTTTTCCCTCCAAAAGTTCCATTGCAGTTTGGCAACCCCCATCAATTACACGATCCACAGCAGCAACTACACCAACAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATTGGTGGTGCTAACAATGGCATGCACCACCCACATCACACTGAAAGTACCCTTGGAGGTGCTAGTGCTGGTGGCCCTCCTCGAGGTTCAGGGCAAACTGATGGTCGTGGAAGTGGCAAGCAAGACTCCGCTGATGTGGGGGGTGCAGGTACCGATGGTCAGGGAAGTGCAGCTGGTGGTCGGGGCAGCGGTGGTGGTGGTGATGGTGAGGAAGCTAAGTAA

mRNA sequence

ATGAATGGTTTCAACTGCATGCAGTATCTTGATGAGAACAAAAAGTTGATATTGGCCATACTGGACAACCAACATCTGGGGAAACTAGCTGAATGTGCTCAGTACCAAGCTCAACTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCACAGGCACCGGCCATGCCTCCACAGATGGCTCCCCATCCTGCTATGCAGCAAGGGGGTTATTATATGCAGCACCCTCAGGCAGCTATAATGGCTCAGCAATCGGGACTTTTCCCTCCAAAAGTTCCATTGCAGTTTGGCAACCCCCATCAATTACACGATCCACAGCAGCAACTACACCAACAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATTGGTGGTGCTAACAATGGCATGCACCACCCACATCACACTGAAAGTACCCTTGGAGGTGCTAGTGCTGGTGGCCCTCCTCGAGGTTCAGGGCAAACTGATGGTCGTGGAAGTGGCAAGCAAGACTCCGCTGATGTGGGGGGTGCAGGTACCGATGGTCAGGGAAGTGCAGCTGGTGGTCGGGGCAGCGGTGGTGGTGGTGATGGTGAGGAAGCTAAGTAA

Coding sequence (CDS)

ATGAATGGTTTCAACTGCATGCAGTATCTTGATGAGAACAAAAAGTTGATATTGGCCATACTGGACAACCAACATCTGGGGAAACTAGCTGAATGTGCTCAGTACCAAGCTCAACTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCACAGGCACCGGCCATGCCTCCACAGATGGCTCCCCATCCTGCTATGCAGCAAGGGGGTTATTATATGCAGCACCCTCAGGCAGCTATAATGGCTCAGCAATCGGGACTTTTCCCTCCAAAAGTTCCATTGCAGTTTGGCAACCCCCATCAATTACACGATCCACAGCAGCAACTACACCAACAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATTGGTGGTGCTAACAATGGCATGCACCACCCACATCACACTGAAAGTACCCTTGGAGGTGCTAGTGCTGGTGGCCCTCCTCGAGGTTCAGGGCAAACTGATGGTCGTGGAAGTGGCAAGCAAGACTCCGCTGATGTGGGGGGTGCAGGTACCGATGGTCAGGGAAGTGCAGCTGGTGGTCGGGGCAGCGGTGGTGGTGGTGATGGTGAGGAAGCTAAGTAA

Protein sequence

MNGFNCMQYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADVGGAGTDGQGSAAGGRGSGGGGDGEEAK*

Homology

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BLAST of Chy3G051320 vs. ExPASy Swiss-Prot
Match: Q93VH6 (GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.8e-41
Identity = 114/198 (57.58%), Postives = 132/198 (66.67%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAP-------AMP 67
           +YLDENKKLI+AIL+NQ+LGKLAECAQYQA LQKNLMYLAAIADAQPQ P       AM 
Sbjct: 28  KYLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIADAQPQPPAATLTSGAMT 87

Query: 68  PQ-MAPHPAMQQ--GGYYMQHPQAAIMAQQ--SGLFPPKVPLQFGNPHQLHDPQQQLHQQ 127
           PQ MAP+P+  Q    Y+MQ  QA  MAQQ   G+FPP+ PLQFG+PHQ  DPQQQL   
Sbjct: 88  PQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPPGIFPPRGPLQFGSPHQFLDPQQQL--- 147

Query: 128 HQQAMQGQMGLRPIG-GANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADV 187
           HQQAMQG MG+RP+G   NNG+ H  H   T   A+  GP       D  G GK D  ++
Sbjct: 148 HQQAMQGHMGIRPMGLNNNNGLQHQMHHHETALAANNAGP------NDASGGGKPDGTNM 207

Query: 188 GGAGTDGQGSAAGGRGSG 193
             +G DGQG +A   G G
Sbjct: 208 SQSGADGQGGSAARHGGG 216

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BLAST of Chy3G051320 vs. ExPASy Swiss-Prot
Match: Q9MAL9 (GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.5e-37
Identity = 100/172 (58.14%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAP--------AM 67
           +YLDENKKLI+AI++NQ+LGKLAECAQYQA LQKNLMYLAAIADAQP  P        A+
Sbjct: 29  KYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAV 88

Query: 68  PPQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQ 127
             QMA PH  MQ   Y+MQHPQA+     +G+F P+ PLQFG+P Q  DPQQQ  Q HQQ
Sbjct: 89  AAQMATPHSGMQPPSYFMQHPQAS----PAGIFAPRGPLQFGSPLQFQDPQQQ-QQIHQQ 148

Query: 128 AMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQD 171
           AMQG MG+RP+G  NNGM H      T  G + G   RG  Q    G GK D
Sbjct: 149 AMQGHMGIRPMGMTNNGMQHAMQQPETGLGGNVG--LRGGKQDGADGQGKDD 193

[Close]

BLAST of Chy3G051320 vs. ExPASy Swiss-Prot
Match: Q8L8A5 (GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 69/177 (38.98%), Postives = 93/177 (52.54%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 67
           QYLDENK LIL I+++Q+ GKL+ECA+ QA+LQ+NLMYLAAIAD+QPQ P++  Q     
Sbjct: 27  QYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPSVHSQYGSAG 86

Query: 68  A----MQQGGYYMQHPQAAIMAQ--QSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQAMQ 127
                 + G +Y+Q  QA    Q  Q  L   +  + +    Q   P   L  QHQQ   
Sbjct: 87  GGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYAQQQQQQQPYATL--QHQQLHH 146

Query: 128 GQMGLRPI--GGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADVGG 177
            Q+G+     GG ++G+H              G P  GSG   G G G+  S+  GG
Sbjct: 147 SQLGMSSSSGGGGSSGLHILQGEAGGFHDFGRGKPEMGSG---GGGEGRGGSSGDGG 198

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BLAST of Chy3G051320 vs. ExPASy Swiss-Prot
Match: Q6AVI1 (GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-14
Identity = 83/199 (41.71%), Postives = 104/199 (52.26%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 67
           QYLDENK+LILAILDNQ+ GK+ ECA+ QA+LQ NLMYLAAIAD+QP   A   Q   + 
Sbjct: 30  QYLDENKQLILAILDNQNNGKVEECARNQAKLQHNLMYLAAIADSQPPQTAAMSQYPSNL 89

Query: 68  AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQAMQGQMGLR 127
            MQ G  YM    A +MA QS L   +  + +  P     P QQ  QQ   A  GQ+G+ 
Sbjct: 90  MMQSGARYMPQQSAQMMAPQS-LMAARSSMMYAQP--ALSPLQQQQQQQAAAAHGQLGMG 149

Query: 128 PIGGANNGMHHPHHTESTLGGASAGGPPRGSGQT-DGRGSGKQDSADVGGAGTDGQGSAA 187
             GG  +G     H E+++GG   GG   G+G +    G         GG G +G  S +
Sbjct: 150 S-GGTTSGF-SILHGEASMGGGGGGG---GAGNSMMNAGVFSDFGRGGGGGGKEGSTSLS 209

Query: 188 ----GGRGSGGGGDGEEAK 202
               G       GDGE  K
Sbjct: 210 VDVRGANSGAQSGDGEYLK 220

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BLAST of Chy3G051320 vs. ExPASy Swiss-Prot
Match: A5HEH4 (GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-13
Identity = 82/208 (39.42%), Postives = 103/208 (49.52%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 67
           QYLDENK+LILAILDNQ+ GK  EC ++QA+LQ NLMYLAAIAD+QP   A   Q   + 
Sbjct: 30  QYLDENKQLILAILDNQNNGKAEECERHQAKLQHNLMYLAAIADSQPPQTAPLSQYPSNL 89

Query: 68  AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQAMQGQMGLR 127
            MQ G  YM  PQ+  M     L   +  + + +P     P QQ     QQA  GQ+G+ 
Sbjct: 90  MMQPGPRYMP-PQSGQMMNPQSLMAARSSMMYAHPSL--SPLQQ-----QQAAHGQLGMA 149

Query: 128 PIGGANNGMHHPH---HTESTLGGASAGGPPRGSGQTDGRGSGKQDSADVGGAGTDGQGS 187
           P GG   G        H E+++GG  AG          G G+   ++    G G  G G+
Sbjct: 150 P-GGGGGGTTSGFSILHGEASMGGGGAGA---------GAGNNMMNAGMFSGFGRSGSGA 209

Query: 188 ----------AAGGRGSGG-GGDGEEAK 202
                       GG  SG   GDGE  K
Sbjct: 210 KEGSTSLSVDVRGGTSSGAQSGDGEYLK 219

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BLAST of Chy3G051320 vs. ExPASy TrEMBL
Match: A0A5A7TJ53 (GRF1-interacting factor 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001030 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.5e-96
Identity = 194/204 (95.10%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MNGFNCMQYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMP 60
           MNGFNCMQYLDENKKLILAILDNQ+LGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMP
Sbjct: 1   MNGFNCMQYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMP 60

Query: 61  P---QMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQ 120
           P   QMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQL DPQQQLHQQHQ
Sbjct: 61  PQNGQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQ 120

Query: 121 QAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADVGGA 180
           QAMQGQMGLRPIGGANNGMHHPHHTESTLG ASAGGPPR SGQTDGRGSGKQDSADVGGA
Sbjct: 121 QAMQGQMGLRPIGGANNGMHHPHHTESTLGSASAGGPPRSSGQTDGRGSGKQDSADVGGA 180

Query: 181 GTDGQGSAAGGRGSGGGGDGEEAK 202
           GTDGQG+AAGGR  GGGGDGEEAK
Sbjct: 181 GTDGQGNAAGGR--GGGGDGEEAK 202

[Close]

BLAST of Chy3G051320 vs. ExPASy TrEMBL
Match: A0A0A0K7M8 (SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008810 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.7e-93
Identity = 188/194 (96.91%), Postives = 190/194 (97.94%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 67
           +YLDENKKLILAILDNQ+LGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP
Sbjct: 26  KYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 85

Query: 68  AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQAMQGQMGLR 127
           AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQL DPQQQLHQQHQQAMQGQMGLR
Sbjct: 86  AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLR 145

Query: 128 PIGGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADVGGAGTDGQGSAAG 187
           PIGGANNGMHHPHHTESTLGGASAGGPPR SGQTDGRGSGKQDSADVGGAGTDGQGSAAG
Sbjct: 146 PIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTDGRGSGKQDSADVGGAGTDGQGSAAG 205

Query: 188 GRGSGGGGDGEEAK 202
           GR  GGGGDGEEAK
Sbjct: 206 GR--GGGGDGEEAK 217

[Close]

BLAST of Chy3G051320 vs. ExPASy TrEMBL
Match: A0A1S4DTX1 (GRF1-interacting factor 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.0e-92
Identity = 186/194 (95.88%), Postives = 189/194 (97.42%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 67
           +YLDENKKLILAILDNQ+LGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP
Sbjct: 26  KYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 85

Query: 68  AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQAMQGQMGLR 127
           AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQL DPQQQLHQQHQQAMQGQMGLR
Sbjct: 86  AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLR 145

Query: 128 PIGGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADVGGAGTDGQGSAAG 187
           PIGGANNGMHHPHHTESTLG ASAGGPPR SGQTDGRGSGKQDSADVGGAGTDGQG+AAG
Sbjct: 146 PIGGANNGMHHPHHTESTLGSASAGGPPRSSGQTDGRGSGKQDSADVGGAGTDGQGNAAG 205

Query: 188 GRGSGGGGDGEEAK 202
           GR  GGGGDGEEAK
Sbjct: 206 GR--GGGGDGEEAK 217

[Close]

BLAST of Chy3G051320 vs. ExPASy TrEMBL
Match: A0A1S4DTY1 (GRF1-interacting factor 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.3e-90
Identity = 186/197 (94.42%), Postives = 189/197 (95.94%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPP---QMA 67
           +YLDENKKLILAILDNQ+LGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPP   QMA
Sbjct: 26  KYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQNGQMA 85

Query: 68  PHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQAMQGQM 127
           PHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQL DPQQQLHQQHQQAMQGQM
Sbjct: 86  PHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQM 145

Query: 128 GLRPIGGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADVGGAGTDGQGS 187
           GLRPIGGANNGMHHPHHTESTLG ASAGGPPR SGQTDGRGSGKQDSADVGGAGTDGQG+
Sbjct: 146 GLRPIGGANNGMHHPHHTESTLGSASAGGPPRSSGQTDGRGSGKQDSADVGGAGTDGQGN 205

Query: 188 AAGGRGSGGGGDGEEAK 202
           AAGGR  GGGGDGEEAK
Sbjct: 206 AAGGR--GGGGDGEEAK 220

[Close]

BLAST of Chy3G051320 vs. ExPASy TrEMBL
Match: A0A6J1JX83 (GRF1-interacting factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489667 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 7.7e-88
Identity = 178/194 (91.75%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 67
           +YLDENKKLILAILDNQ+LGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP
Sbjct: 26  KYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 85

Query: 68  AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQAMQGQMGLR 127
           AMQQGGYYMQHPQAA+MAQQSGLFPPKVPLQFGNPHQL D QQQLHQQHQQAMQGQMGLR
Sbjct: 86  AMQQGGYYMQHPQAAMMAQQSGLFPPKVPLQFGNPHQLQDQQQQLHQQHQQAMQGQMGLR 145

Query: 128 PIGGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADVGGAGTDGQGSAAG 187
           PIGGANNGMHHPHHTE+TLGGASAGGP R SGQTDGRG GKQDSADVGG G D QG++AG
Sbjct: 146 PIGGANNGMHHPHHTEATLGGASAGGPARSSGQTDGRGGGKQDSADVGGTGADAQGNSAG 205

Query: 188 GRGSGGGGDGEEAK 202
           GR  GGGGDGEEAK
Sbjct: 206 GR--GGGGDGEEAK 217

[Close]

BLAST of Chy3G051320 vs. NCBI nr
Match: KAA0041455.1 (GRF1-interacting factor 3 isoform X1 [Cucumis melo var. makuwa] >TYK24329.1 GRF1-interacting factor 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 360 bits (924), Expect = 1.08e-124
Identity = 194/204 (95.10%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MNGFNCMQYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMP 60
           MNGFNCMQYLDENKKLILAILDNQ+LGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMP
Sbjct: 1   MNGFNCMQYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMP 60

Query: 61  PQ---MAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQ 120
           PQ   MAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQL DPQQQLHQQHQ
Sbjct: 61  PQNGQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQ 120

Query: 121 QAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADVGGA 180
           QAMQGQMGLRPIGGANNGMHHPHHTESTLG ASAGGPPR SGQTDGRGSGKQDSADVGGA
Sbjct: 121 QAMQGQMGLRPIGGANNGMHHPHHTESTLGSASAGGPPRSSGQTDGRGSGKQDSADVGGA 180

Query: 181 GTDGQGSAAGGRGSGGGGDGEEAK 201
           GTDGQG+AAGGRG  GGGDGEEAK
Sbjct: 181 GTDGQGNAAGGRG--GGGDGEEAK 202

[Close]

BLAST of Chy3G051320 vs. NCBI nr
Match: XP_004138447.1 (GRF1-interacting factor 3 [Cucumis sativus] >KGN45750.1 hypothetical protein Csa_005109 [Cucumis sativus])

HSP 1 Score: 350 bits (899), Expect = 1.18e-120
Identity = 188/194 (96.91%), Postives = 190/194 (97.94%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 67
           +YLDENKKLILAILDNQ+LGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP
Sbjct: 26  KYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 85

Query: 68  AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQAMQGQMGLR 127
           AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQL DPQQQLHQQHQQAMQGQMGLR
Sbjct: 86  AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLR 145

Query: 128 PIGGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADVGGAGTDGQGSAAG 187
           PIGGANNGMHHPHHTESTLGGASAGGPPR SGQTDGRGSGKQDSADVGGAGTDGQGSAAG
Sbjct: 146 PIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTDGRGSGKQDSADVGGAGTDGQGSAAG 205

Query: 188 GRGSGGGGDGEEAK 201
           GRG  GGGDGEEAK
Sbjct: 206 GRG--GGGDGEEAK 217

[Close]

BLAST of Chy3G051320 vs. NCBI nr
Match: XP_016899447.1 (PREDICTED: GRF1-interacting factor 3 isoform X2 [Cucumis melo])

HSP 1 Score: 347 bits (890), Expect = 2.78e-119
Identity = 186/194 (95.88%), Postives = 189/194 (97.42%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 67
           +YLDENKKLILAILDNQ+LGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP
Sbjct: 26  KYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 85

Query: 68  AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQAMQGQMGLR 127
           AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQL DPQQQLHQQHQQAMQGQMGLR
Sbjct: 86  AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLR 145

Query: 128 PIGGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADVGGAGTDGQGSAAG 187
           PIGGANNGMHHPHHTESTLG ASAGGPPR SGQTDGRGSGKQDSADVGGAGTDGQG+AAG
Sbjct: 146 PIGGANNGMHHPHHTESTLGSASAGGPPRSSGQTDGRGSGKQDSADVGGAGTDGQGNAAG 205

Query: 188 GRGSGGGGDGEEAK 201
           GRG  GGGDGEEAK
Sbjct: 206 GRG--GGGDGEEAK 217

[Close]

BLAST of Chy3G051320 vs. NCBI nr
Match: XP_038885310.1 (GRF1-interacting factor 3-like [Benincasa hispida] >XP_038885311.1 GRF1-interacting factor 3-like [Benincasa hispida])

HSP 1 Score: 343 bits (881), Expect = 6.55e-118
Identity = 184/194 (94.85%), Postives = 188/194 (96.91%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 67
           +YLDENKKLILAILDNQ+LGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP
Sbjct: 26  KYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 85

Query: 68  AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQAMQGQMGLR 127
           AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQL DPQQQLHQQHQQAMQGQMGLR
Sbjct: 86  AMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLR 145

Query: 128 PIGGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADVGGAGTDGQGSAAG 187
           PIGGANNGMHHPHHTESTL GA+AGGPPRGSGQTDGRG GKQDSADVGGAG DGQGS+AG
Sbjct: 146 PIGGANNGMHHPHHTESTLVGATAGGPPRGSGQTDGRGGGKQDSADVGGAGADGQGSSAG 205

Query: 188 GRGSGGGGDGEEAK 201
           GRG  GGGDGEEAK
Sbjct: 206 GRG--GGGDGEEAK 217

[Close]

BLAST of Chy3G051320 vs. NCBI nr
Match: XP_016899446.1 (PREDICTED: GRF1-interacting factor 3 isoform X1 [Cucumis melo])

HSP 1 Score: 342 bits (876), Expect = 4.20e-117
Identity = 186/197 (94.42%), Postives = 189/197 (95.94%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQ---MA 67
           +YLDENKKLILAILDNQ+LGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQ   MA
Sbjct: 26  KYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQNGQMA 85

Query: 68  PHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQAMQGQM 127
           PHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQL DPQQQLHQQHQQAMQGQM
Sbjct: 86  PHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQM 145

Query: 128 GLRPIGGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADVGGAGTDGQGS 187
           GLRPIGGANNGMHHPHHTESTLG ASAGGPPR SGQTDGRGSGKQDSADVGGAGTDGQG+
Sbjct: 146 GLRPIGGANNGMHHPHHTESTLGSASAGGPPRSSGQTDGRGSGKQDSADVGGAGTDGQGN 205

Query: 188 AAGGRGSGGGGDGEEAK 201
           AAGGRG  GGGDGEEAK
Sbjct: 206 AAGGRG--GGGDGEEAK 220

[Close]

BLAST of Chy3G051320 vs. TAIR 10
Match: AT4G00850.1 (GRF1-interacting factor 3 )

HSP 1 Score: 168.7 bits (426), Expect = 4.8e-42
Identity = 114/198 (57.58%), Postives = 132/198 (66.67%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAP-------AMP 67
           +YLDENKKLI+AIL+NQ+LGKLAECAQYQA LQKNLMYLAAIADAQPQ P       AM 
Sbjct: 28  KYLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIADAQPQPPAATLTSGAMT 87

Query: 68  PQ-MAPHPAMQQ--GGYYMQHPQAAIMAQQ--SGLFPPKVPLQFGNPHQLHDPQQQLHQQ 127
           PQ MAP+P+  Q    Y+MQ  QA  MAQQ   G+FPP+ PLQFG+PHQ  DPQQQL   
Sbjct: 88  PQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPPGIFPPRGPLQFGSPHQFLDPQQQL--- 147

Query: 128 HQQAMQGQMGLRPIG-GANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADV 187
           HQQAMQG MG+RP+G   NNG+ H  H   T   A+  GP       D  G GK D  ++
Sbjct: 148 HQQAMQGHMGIRPMGLNNNNGLQHQMHHHETALAANNAGP------NDASGGGKPDGTNM 207

Query: 188 GGAGTDGQGSAAGGRGSG 193
             +G DGQG +A   G G
Sbjct: 208 SQSGADGQGGSAARHGGG 216

[Close]

BLAST of Chy3G051320 vs. TAIR 10
Match: AT1G01160.2 (GRF1-interacting factor 2 )

HSP 1 Score: 158.3 bits (399), Expect = 6.5e-39
Identity = 101/176 (57.39%), Postives = 117/176 (66.48%), Query Frame = 0


Query: 4   FNCMQYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAP------ 63
           F+ + YLDENKKLI+AI++NQ+LGKLAECAQYQA LQKNLMYLAAIADAQP  P      
Sbjct: 59  FSWLDYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSP 118

Query: 64  --AMPPQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQ 123
             A+  QMA PH  MQ   Y+MQHPQA+     +G+F P+ PLQFG+P Q  DPQQQ  Q
Sbjct: 119 STAVAAQMATPHSGMQPPSYFMQHPQAS----PAGIFAPRGPLQFGSPLQFQDPQQQ-QQ 178

Query: 124 QHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQD 171
            HQQAMQG MG+RP+G  NNGM H      T  G + G   RG  Q    G GK D
Sbjct: 179 IHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGGNVG--LRGGKQDGADGQGKDD 227

[Close]

BLAST of Chy3G051320 vs. TAIR 10
Match: AT1G01160.1 (GRF1-interacting factor 2 )

HSP 1 Score: 156.0 bits (393), Expect = 3.2e-38
Identity = 100/172 (58.14%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAP--------AM 67
           +YLDENKKLI+AI++NQ+LGKLAECAQYQA LQKNLMYLAAIADAQP  P        A+
Sbjct: 29  KYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAV 88

Query: 68  PPQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQ 127
             QMA PH  MQ   Y+MQHPQA+     +G+F P+ PLQFG+P Q  DPQQQ  Q HQQ
Sbjct: 89  AAQMATPHSGMQPPSYFMQHPQAS----PAGIFAPRGPLQFGSPLQFQDPQQQ-QQIHQQ 148

Query: 128 AMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQD 171
           AMQG MG+RP+G  NNGM H      T  G + G   RG  Q    G GK D
Sbjct: 149 AMQGHMGIRPMGMTNNGMQHAMQQPETGLGGNVG--LRGGKQDGADGQGKDD 193

[Close]

BLAST of Chy3G051320 vs. TAIR 10
Match: AT5G28640.1 (SSXT family protein )

HSP 1 Score: 81.6 bits (200), Expect = 7.7e-16
Identity = 69/177 (38.98%), Postives = 93/177 (52.54%), Query Frame = 0


Query: 8   QYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHP 67
           QYLDENK LIL I+++Q+ GKL+ECA+ QA+LQ+NLMYLAAIAD+QPQ P++  Q     
Sbjct: 27  QYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPSVHSQYGSAG 86

Query: 68  A----MQQGGYYMQHPQAAIMAQ--QSGLFPPKVPLQFGNPHQLHDPQQQLHQQHQQAMQ 127
                 + G +Y+Q  QA    Q  Q  L   +  + +    Q   P   L  QHQQ   
Sbjct: 87  GGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYAQQQQQQQPYATL--QHQQLHH 146

Query: 128 GQMGLRPI--GGANNGMHHPHHTESTLGGASAGGPPRGSGQTDGRGSGKQDSADVGG 177
            Q+G+     GG ++G+H              G P  GSG   G G G+  S+  GG
Sbjct: 147 SQLGMSSSSGGGGSSGLHILQGEAGGFHDFGRGKPEMGSG---GGGEGRGGSSGDGG 198

The following BLAST results are available for this feature:

BLAST of Chy3G051320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VH6	6.8e-41	57.58	GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1	[more]
Q9MAL9	4.5e-37	58.14	GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1	[more]
Q8L8A5	1.1e-14	38.98	GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1	[more]
Q6AVI1	1.4e-14	41.71	GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 S...	[more]
A5HEH4	2.0e-13	39.42	GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1	[more]

BLAST of Chy3G051320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TJ53	4.5e-96	95.10	GRF1-interacting factor 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0K7M8	2.7e-93	96.91	SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008810 PE=3 S...	[more]
A0A1S4DTX1	3.0e-92	95.88	GRF1-interacting factor 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=...	[more]
A0A1S4DTY1	1.3e-90	94.42	GRF1-interacting factor 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=...	[more]
A0A6J1JX83	7.7e-88	91.75	GRF1-interacting factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489667 PE=3 ...	[more]

BLAST of Chy3G051320 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041455.1	1.08e-124	95.10	GRF1-interacting factor 3 isoform X1 [Cucumis melo var. makuwa] >TYK24329.1 GRF1...	[more]
XP_004138447.1	1.18e-120	96.91	GRF1-interacting factor 3 [Cucumis sativus] >KGN45750.1 hypothetical protein Csa...	[more]
XP_016899447.1	2.78e-119	95.88	PREDICTED: GRF1-interacting factor 3 isoform X2 [Cucumis melo]	[more]
XP_038885310.1	6.55e-118	94.85	GRF1-interacting factor 3-like [Benincasa hispida] >XP_038885311.1 GRF1-interact...	[more]
XP_016899446.1	4.20e-117	94.42	PREDICTED: GRF1-interacting factor 3 isoform X1 [Cucumis melo]	[more]

BLAST of Chy3G051320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00850.1	4.8e-42	57.58	GRF1-interacting factor 3	[more]
AT1G01160.2	6.5e-39	57.39	GRF1-interacting factor 2	[more]
AT1G01160.1	3.2e-38	58.14	GRF1-interacting factor 2	[more]
AT5G28640.1	7.7e-16	38.98	SSXT family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007726	SS18, N-terminal	PFAM	PF05030	SSXT	coord: 9..55 e-value: 4.4E-17 score: 61.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..201
None	No IPR available	PANTHER	PTHR23107:SF26	BNAA09G51550D PROTEIN	coord: 7..171
IPR044779	SS18 family	PANTHER	PTHR23107	SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN	coord: 7..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G051320.1	Chy3G051320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008283	cell population proliferation
biological_process	GO:0048366	leaf development
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003713	transcription coactivator activity