
Chy2G047570 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAAGGCTATTGCAGGCTTCAGCATTATCAAACCAACCCTGCATAGCTCAAATCTCCACCCCAAATCAGCTCTCATCCCACATTCAAAACTGGTAAAGAATTATCTTCTTTCTTTTTGCCACAAAATTCCATTCATTTTTAACGTCCTCAATTTGACCATTAGATTATTATTGTTGCAGCTTTCAAACTCTGGAGGTTTCAGTCATCAAGAACTGGTAAGTTCCTCTGACTTCCACTAGAGTGAAAGTAAAATTGATTGATAAATTCAATATAAAGAAGTTCGTGTGCTTTTGTTCATAGCCTAAAGTTATAAAGCCAAAAAGGGGATCTCTAAGCAAAGTGAATGCCTTCCCCGATTGGCAATTGATGGCAGTTCTAGTTGATCATTTGGATGGCCAAAGAGACCTTGTTACCCATAAATCCATAGTGCATCTTAGTGATGCAGCAATAAAGAATGTCTGTAAGTGTTTGATTATACTTAAATTCTCTACGTCAGTTGAATAAGTAGAAAATTAGGCCATTGGAATGGAAAATGATCTTCACTTTAACACTTCAAACCATTTTTTAATGTCAGACAGTCTTTACATCATGTTCACATGTTGGGGTTGTTTGTTCTTTGGCTCCATGAAGGTACAATCTCTCCAAATTCAATCTATTTGGGTTGAGTCAAATTGTTGAGTACTGAACAAAGATTATGGTTTTAGGATCCATATTATGACTCAGAGGTGTACAGGAAAGATGGAGGAGATGGAACAGGACATTGGGTCTATGAAAAGGTGGACTTCTATAGAACTTAAGATCTTTAACAATGGCATCATATTTAAGGATTTGTGTCTGTAAATGTCTGATATTGCAGCAAGAAGACATTGAAGAAGCAGCAAGAGCAGACCTATGGAGGGAGGAGCTGATAGAGGAGATTGAACAAAAGGTTGGAGGACTAAGAGAGTTGGAAGAAGCTGGAAAGAAATAA ATGGCTAAGGCTATTGCAGGCTTCAGCATTATCAAACCAACCCTGCATAGCTCAAATCTCCACCCCAAATCAGCTCTCATCCCACATTCAAAACTGCTTTCAAACTCTGGAGGTTTCAGTCATCAAGAACTGCCTAAAGTTATAAAGCCAAAAAGGGGATCTCTAAGCAAAGTGAATGCCTTCCCCGATTGGCAATTGATGGCAGTTCTAGTTGATCATTTGGATGGCCAAAGAGACCTTGTTACCCATAAATCCATAGTGCATCTTAGTGATGCAGCAATAAAGAATGTCTACAGTCTTTACATCATGTTCACATGTTGGGGTTGTTTGTTCTTTGGCTCCATGAAGGATCCATATTATGACTCAGAGGTGTACAGGAAAGATGGAGGAGATGGAACAGGACATTGGGTCTATGAAAAGCAAGAAGACATTGAAGAAGCAGCAAGAGCAGACCTATGGAGGGAGGAGCTGATAGAGGAGATTGAACAAAAGGTTGGAGGACTAAGAGAGTTGGAAGAAGCTGGAAAGAAATAA ATGGCTAAGGCTATTGCAGGCTTCAGCATTATCAAACCAACCCTGCATAGCTCAAATCTCCACCCCAAATCAGCTCTCATCCCACATTCAAAACTGCTTTCAAACTCTGGAGGTTTCAGTCATCAAGAACTGCCTAAAGTTATAAAGCCAAAAAGGGGATCTCTAAGCAAAGTGAATGCCTTCCCCGATTGGCAATTGATGGCAGTTCTAGTTGATCATTTGGATGGCCAAAGAGACCTTGTTACCCATAAATCCATAGTGCATCTTAGTGATGCAGCAATAAAGAATGTCTACAGTCTTTACATCATGTTCACATGTTGGGGTTGTTTGTTCTTTGGCTCCATGAAGGATCCATATTATGACTCAGAGGTGTACAGGAAAGATGGAGGAGATGGAACAGGACATTGGGTCTATGAAAAGCAAGAAGACATTGAAGAAGCAGCAAGAGCAGACCTATGGAGGGAGGAGCTGATAGAGGAGATTGAACAAAAGGTTGGAGGACTAAGAGAGTTGGAAGAAGCTGGAAAGAAATAA MAKAIAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVIKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDAAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK* Homology
BLAST of Chy2G047570 vs. ExPASy Swiss-Prot
Match: Q8RXS1 (Photosynthetic NDH subunit of subcomplex B 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB4 PE=2 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 8.6e-48 Identity = 108/184 (58.70%), Postives = 123/184 (66.85%), Query Frame = 0
BLAST of Chy2G047570 vs. ExPASy TrEMBL
Match: A0A0A0LRP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009830 PE=4 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 1.8e-96 Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of Chy2G047570 vs. ExPASy TrEMBL
Match: A0A5A7UWT7 (Photosynthetic NDH subunit of subcomplex B 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002540 PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95 Identity = 175/177 (98.87%), Postives = 175/177 (98.87%), Query Frame = 0
BLAST of Chy2G047570 vs. ExPASy TrEMBL
Match: A0A1S3BVN6 (photosynthetic NDH subunit of subcomplex B 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494001 PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95 Identity = 175/177 (98.87%), Postives = 175/177 (98.87%), Query Frame = 0
BLAST of Chy2G047570 vs. ExPASy TrEMBL
Match: A0A6J1JG67 (photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111484826 PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 1.9e-82 Identity = 156/178 (87.64%), Postives = 164/178 (92.13%), Query Frame = 0
BLAST of Chy2G047570 vs. ExPASy TrEMBL
Match: A0A6J1E2I6 (photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111429992 PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 4.2e-82 Identity = 155/178 (87.08%), Postives = 163/178 (91.57%), Query Frame = 0
BLAST of Chy2G047570 vs. NCBI nr
Match: XP_004138173.1 (photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Cucumis sativus] >KGN63679.1 hypothetical protein Csa_013717 [Cucumis sativus]) HSP 1 Score: 361 bits (926), Expect = 8.33e-126 Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of Chy2G047570 vs. NCBI nr
Match: XP_008453213.1 (PREDICTED: photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Cucumis melo] >KAA0057951.1 photosynthetic NDH subunit of subcomplex B 4 [Cucumis melo var. makuwa]) HSP 1 Score: 357 bits (917), Expect = 1.96e-124 Identity = 175/177 (98.87%), Postives = 175/177 (98.87%), Query Frame = 0
BLAST of Chy2G047570 vs. NCBI nr
Match: XP_038880039.1 (photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Benincasa hispida]) HSP 1 Score: 327 bits (839), Expect = 1.59e-112 Identity = 162/178 (91.01%), Postives = 168/178 (94.38%), Query Frame = 0
BLAST of Chy2G047570 vs. NCBI nr
Match: XP_023516363.1 (photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 318 bits (816), Expect = 5.11e-109 Identity = 158/178 (88.76%), Postives = 165/178 (92.70%), Query Frame = 0
BLAST of Chy2G047570 vs. NCBI nr
Match: XP_022987205.1 (photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 314 bits (805), Expect = 2.43e-107 Identity = 156/178 (87.64%), Postives = 164/178 (92.13%), Query Frame = 0
BLAST of Chy2G047570 vs. TAIR 10
Match: AT1G18730.3 (NDH dependent flow 6 ) HSP 1 Score: 193.0 bits (489), Expect = 2.1e-49 Identity = 108/180 (60.00%), Postives = 122/180 (67.78%), Query Frame = 0
BLAST of Chy2G047570 vs. TAIR 10
Match: AT1G18730.1 (NDH dependent flow 6 ) HSP 1 Score: 191.4 bits (485), Expect = 6.1e-49 Identity = 108/184 (58.70%), Postives = 123/184 (66.85%), Query Frame = 0
BLAST of Chy2G047570 vs. TAIR 10
Match: AT1G18730.2 (NDH dependent flow 6 ) HSP 1 Score: 134.8 bits (338), Expect = 6.8e-32 Identity = 75/142 (52.82%), Postives = 88/142 (61.97%), Query Frame = 0
BLAST of Chy2G047570 vs. TAIR 10
Match: AT1G18730.4 (NDH dependent flow 6 ) HSP 1 Score: 134.8 bits (338), Expect = 6.8e-32 Identity = 75/142 (52.82%), Postives = 88/142 (61.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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