Chy2G046770 (gene) Cucumber (hystrix) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGTCCAGAAAGGATGGCAAAAGCCGATCCGTTGCAAACACGAAGGCGGAAACTATGGAGACTATGTTTTCCCTGCTGTAATTTCTGAGCCTCTTATTGCCCAACCTGTCAGTGCTCTTGATTGTTTTCACTCAGATTCATTTTCATTTGTATGATATATGTAGAACTACAGTGATCCCAACATTTGTAGTTTATTTTATAGCATAAAAAACCCATGTTCTGAATACATTATTTACATTGTGTCTCACTTTTAGCCTCAGATATTAGCTTAGACAATTACCAATCAAGAAAATAAGACATTTGAGAATTTTTAAGAGTTACTAAAAAACCACTTAACTCAAAAGTTGAGAAGGAAAGCTCCACTGGAAGGTTATGCCCAGCTCAATGGTTAAAAAGTTGAATCAAGATCATATTTCTAACTTTTAATAGCTTTAAGCAATCAAGTACTATACCAGTACAAAATCCATTCCCTTCAACAATTTAACACGTAATTAAATGATGTATAATTTTATTTGATGGACCTCATACCATTCTTAAATATCACCGATGAGGTAGCTTAAGTATGGAAGATATTTTGTAGTACTAGAAATTTCCTCTATTAGCAATAAAATAAGACCTACCAAATTTAAATATTTTTTGGTTTCAAATTAATAACCTACGTGTTAGACCTCACCTCTTATTATTGTTAGTAGTATGGAGCCCACACGTGAAGAGATCTTTAAAGAGTAAATTGAAGACATAAGGTAGTCATATGATACTTATTTAACCTATGGATGAACTCCAATAAAAATGGTCCTACTCCACTTAATCTTTAGGTATTCCCAAGTAAGCTACAGTTACTTATGAAACTTTCTACCACTTTCTTAATCCATTATTGCTCAAATTTGTAATCTCAATGGCTTCTGACTTTTGCACATAAAATAATGATATAGTTGAAATCAGGTCAAGAAGAAGAGATCATGGGAATAGTAAGATAAGATCCTCCTCAACTATAATTAGATTGCTGGAAGTTTCTAGAGCTCTTGTGAGACAAATGGTTGAGTTGATAGATAGCTCAGTCCAATCCTAATCCAACTTGGGAGCCTTAAGCCAAATGGTGCCCACTTTTAGTGTGTATTAAGAGTCTTGAAACTGAGCATCTAATGATGCTCCATTGGACCATTTAATATGCAGTGGAAAACACTGTTGGCCACACAAACAAAAAACCATTAGCTTGGGAAAGTAAGTGCCAAATCTGTCTGTTTAGGTAATACTATCTTTTCATTCTTAGCTCACACCATCCATTTCTACTATTACATCCCCCCACCATTACCACTATGTTCTGATTATGTCTAAACAATGCAGGTGACACCAGTTTTGCAGCGGCCAGAAGCGTCGTCGAGCAGGGAGGGGGCGGGTTACAGTTAAATGGAAGTCCAGAAAGGATGGCAAAAGCCGATCCGTTGCAAACACGAAGGCGGAAACTATGGAGACTATGTTTTCCCTGCTGTAATTTCTGAGCCTCTTATTGCCCAACCTGTGACACCAGTTTTGCAGCGGCCAGAAGCGTCGTCGAGCAGGGAGGGGGCGGGTTACAGTTAA ATGGAAGTCCAGAAAGGATGGCAAAAGCCGATCCGTTGCAAACACGAAGGCGGAAACTATGGAGACTATGTTTTCCCTGCTGTAATTTCTGAGCCTCTTATTGCCCAACCTGTGACACCAGTTTTGCAGCGGCCAGAAGCGTCGTCGAGCAGGGAGGGGGCGGGTTACAGTTAA MEVQKGWQKPIRCKHEGGNYGDYVFPAVISEPLIAQPVTPVLQRPEASSSREGAGYS* Homology
BLAST of Chy2G046770 vs. ExPASy TrEMBL
Match: A0A5A7UV29 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003210 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 6.8e-13 Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0
BLAST of Chy2G046770 vs. ExPASy TrEMBL
Match: A0A5D3BGS8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00110 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 5.7e-12 Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0
BLAST of Chy2G046770 vs. NCBI nr
Match: KAE8652447.1 (hypothetical protein Csa_014115 [Cucumis sativus]) HSP 1 Score: 110 bits (275), Expect = 2.61e-27 Identity = 52/57 (91.23%), Postives = 53/57 (92.98%), Query Frame = 0
BLAST of Chy2G046770 vs. NCBI nr
Match: KAA0058016.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 82.0 bits (201), Expect = 1.83e-16 Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0
BLAST of Chy2G046770 vs. NCBI nr
Match: TYJ98239.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 79.0 bits (193), Expect = 2.36e-15 Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0
BLAST of Chy2G046770 vs. NCBI nr
Match: KAG6587606.1 (hypothetical protein SDJN03_16171, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 48.1 bits (113), Expect = 2.07e-04 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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