Chy2G044000 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G044000
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH02: 25593278 .. 25594090 (-)
RNA-Seq Expression	Chy2G044000
Synteny	Chy2G044000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAGGGCTATTACTTTTGTTCCTCTTTTCCATTATTTTCCTCTATCTTATTCCATTTTGCCTATGCGAAACCAATTTCACCACCAAAGCTGATGATCATAATAAGCAGCTGAAGCAGGGGAGGCCCAGAAAAGGTAACAAATCTAACTATCTTTTGAACTTTTCACTTGAAGACGGTGTGAAAAGTGGTATGAAACATGTGTTTGGTTAAGAAAAATTGAAGTGTTGGACAACCACTTAAAATAATTTTTGAAAAATTTTATGTGGTACTTGGCTTGATCACCAACTTGGAGTTGGTAGGGTGAGTTATTAGAGCTCACTCCATGTTTAGATCTTCAATTATTATTACTATTTCAAATCCTCTTTTACTACAATATTTACTTTTTGTCAAAATTCTTACTATCTCCTACTCTCTCTCTCTCTCTAGCACCTTGTTTGTCATTTTTCTATTTTCTACCTAGTATACATCCTGTACATACTATAAAAAAAACACAATGTCCCAAGCATCTTAAAAGTTTATTAAAAAAACTGTTTAAATAAGAAATGACTTTTGGAAAAACAAAATTACCCTAATTCAATCTAAAGTGTTGTTGGATCCACAGATGTACAGGGCAGTGAAGAATTACATGTTGGAGCTGCAGTGGCGACAGTCATGAAAGCAAAAGCAGTTTACGGCGGTGCGAACGACATTCATCACGGACGCTCGAAGAATGATGCTAACTCTTTATGGATCAAATCAATTTCTTCGTTGGTGTGGCAAGTTTCATTTGGATTCCTTGGTTTCTGTCTTGTTGTTAAAGATTTTTAA

mRNA sequence

ATGAAGAAAGGGCTATTACTTTTGTTCCTCTTTTCCATTATTTTCCTCTATCTTATTCCATTTTGCCTATGCGAAACCAATTTCACCACCAAAGCTGATGATCATAATAAGCAGCTGAAGCAGGGGAGGCCCAGAAAAGATGTACAGGGCAGTGAAGAATTACATGTTGGAGCTGCAGTGGCGACAGTCATGAAAGCAAAAGCAGTTTACGGCGGTGCGAACGACATTCATCACGGACGCTCGAAGAATGATGCTAACTCTTTATGGATCAAATCAATTTCTTCGTTGGTGTGGCAAGTTTCATTTGGATTCCTTGGTTTCTGTCTTGTTGTTAAAGATTTTTAA

Coding sequence (CDS)

ATGAAGAAAGGGCTATTACTTTTGTTCCTCTTTTCCATTATTTTCCTCTATCTTATTCCATTTTGCCTATGCGAAACCAATTTCACCACCAAAGCTGATGATCATAATAAGCAGCTGAAGCAGGGGAGGCCCAGAAAAGATGTACAGGGCAGTGAAGAATTACATGTTGGAGCTGCAGTGGCGACAGTCATGAAAGCAAAAGCAGTTTACGGCGGTGCGAACGACATTCATCACGGACGCTCGAAGAATGATGCTAACTCTTTATGGATCAAATCAATTTCTTCGTTGGTGTGGCAAGTTTCATTTGGATTCCTTGGTTTCTGTCTTGTTGTTAAAGATTTTTAA

Protein sequence

MKKGLLLLFLFSIIFLYLIPFCLCETNFTTKADDHNKQLKQGRPRKDVQGSEELHVGAAVATVMKAKAVYGGANDIHHGRSKNDANSLWIKSISSLVWQVSFGFLGFCLVVKDF*

Homology

[Close]

BLAST of Chy2G044000 vs. ExPASy TrEMBL
Match: A0A0A0LW17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257310 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.7e-52
Identity = 105/114 (92.11%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 1   MKKGLLLLFLFSIIFLYLIPFCLCETNFTTKADDHNKQLKQGRPRKDVQGSEELHVGAAV 60
           MKKGLLLLFLFSIIFLYL+PFCLCETNFTTKADDHNKQLKQGRPRKDVQ SEELH GA+V
Sbjct: 1   MKKGLLLLFLFSIIFLYLLPFCLCETNFTTKADDHNKQLKQGRPRKDVQSSEELHGGASV 60

Query: 61  ATVMKAKAVYGGANDIHHGRSKNDANSLWIKSISSLVWQVSFGFLGFCLVVKDF 115
           ATVM+AKAVYGGANDIHHG SKNDANSLWIKSISSLVW+VSFGFLGFC+VVK F
Sbjct: 61  ATVMRAKAVYGGANDIHHGHSKNDANSLWIKSISSLVWKVSFGFLGFCVVVKGF 114

[Close]

BLAST of Chy2G044000 vs. ExPASy TrEMBL
Match: A0A5A7SWW6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00500 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.5e-48
Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 0


Query: 1   MKKGLLLLFLFSIIFLYLIPFCLCETNFTTKADDHNKQLKQGRPRK---DVQGSEELHVG 60
           MKKGLL+LFLFSI+ LYL+PFCLCETNFTTKADDH+KQLKQGRPRK   D+QGSEELH G
Sbjct: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHDKQLKQGRPRKGSTDLQGSEELHGG 60

Query: 61  AAVATVMKAKAVYGGANDIHHGRSKNDANSLWIKSISSLVWQVSFGFLGFCLVVKD 114
           AAV TVM+AKAVYGGANDIHHGRSKNDANSL IKSISSLVW+VSFGFLGFCL+VKD
Sbjct: 61  AAVVTVMRAKAVYGGANDIHHGRSKNDANSLRIKSISSLVWKVSFGFLGFCLIVKD 116

[Close]

BLAST of Chy2G044000 vs. ExPASy TrEMBL
Match: A0A6J1JM10 (uncharacterized protein LOC111485797 OS=Cucurbita maxima OX=3661 GN=LOC111485797 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.1e-26
Identity = 67/111 (60.36%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 1   MKKGLLLLFLFSIIFLYLIPFCLCETNFTTKADDHNKQLKQGRPRKDVQGSEELHVGAAV 60
           M+KG  LL L S++ L L+PFCL E  FT KA D  K LKQGRPRKD+Q SE+++VGAA 
Sbjct: 1   MRKGPFLLLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQASEQINVGAA- 60

Query: 61  ATVMKAKAVYGGANDIHHGRSKNDANSLWIKSISSLVWQVSFGFLGFCLVV 112
             VM+A+ VYGG NDIH G SKNDAN L IKS SSL+W+VS GF   C+++
Sbjct: 61  TRVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWEVSCGFFSLCVLL 110

[Close]

BLAST of Chy2G044000 vs. ExPASy TrEMBL
Match: A0A6J1E284 (uncharacterized protein LOC111429900 OS=Cucurbita moschata OX=3662 GN=LOC111429900 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.2e-26
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 1   MKKGLLLLFLFSIIFLYLIPFCLCETNFTTKADDHNKQLKQGRPRKDVQGSEELHVGAAV 60
           M+KG  LL L S++ L L+PFCL E +FT KA D  K LKQGRPRKD+Q S++++VGAA 
Sbjct: 1   MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAA- 60

Query: 61  ATVMKAKAVYGGANDIHHGRSKNDANSLWIKSISSLVWQVSFGFLGFCLVV 112
             VM+A+ VYGG NDIH G SKNDAN L IKS SSL+W VS GF   C+++
Sbjct: 61  TKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVSCGFFSLCVLL 110

[Close]

BLAST of Chy2G044000 vs. ExPASy TrEMBL
Match: A0A6J1C4Y5 (uncharacterized protein LOC111007432 OS=Momordica charantia OX=3673 GN=LOC111007432 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.9e-14
Identity = 57/116 (49.14%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 2   KKGLLLLFLFSIIFLYLIPFC-LCETNFTTKADD-HNKQLKQGRPRKDVQG----SEELH 61
           K GL++L L SI     +P C   ETNFT K +D + +QLKQGRP KD++G    SEE  
Sbjct: 3   KLGLIILLLISIDL--SLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETG 62

Query: 62  VGAAVATVMKAKAVYGGANDIHHGRSKNDANSLWIKSISSLVWQVSFGFLGFCLVV 112
            GA    +M+A+ VYGGA+D+  G SKNDA SL IKSI S  W+V       C+VV
Sbjct: 63  AGATAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSIPSSFWEV------LCVVV 110

[Close]

BLAST of Chy2G044000 vs. NCBI nr
Match: KGN65174.1 (hypothetical protein Csa_019558 [Cucumis sativus])

HSP 1 Score: 216 bits (550), Expect = 1.64e-70
Identity = 105/114 (92.11%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 1   MKKGLLLLFLFSIIFLYLIPFCLCETNFTTKADDHNKQLKQGRPRKDVQGSEELHVGAAV 60
           MKKGLLLLFLFSIIFLYL+PFCLCETNFTTKADDHNKQLKQGRPRKDVQ SEELH GA+V
Sbjct: 1   MKKGLLLLFLFSIIFLYLLPFCLCETNFTTKADDHNKQLKQGRPRKDVQSSEELHGGASV 60

Query: 61  ATVMKAKAVYGGANDIHHGRSKNDANSLWIKSISSLVWQVSFGFLGFCLVVKDF 114
           ATVM+AKAVYGGANDIHHG SKNDANSLWIKSISSLVW+VSFGFLGFC+VVK F
Sbjct: 61  ATVMRAKAVYGGANDIHHGHSKNDANSLWIKSISSLVWKVSFGFLGFCVVVKGF 114

[Close]

BLAST of Chy2G044000 vs. NCBI nr
Match: KAA0035098.1 (uncharacterized protein E6C27_scaffold57G001730 [Cucumis melo var. makuwa] >TYJ95980.1 uncharacterized protein E5676_scaffold271G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 203 bits (516), Expect = 4.22e-65
Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 0


Query: 1   MKKGLLLLFLFSIIFLYLIPFCLCETNFTTKADDHNKQLKQGRPRK---DVQGSEELHVG 60
           MKKGLL+LFLFSI+ LYL+PFCLCETNFTTKADDH+KQLKQGRPRK   D+QGSEELH G
Sbjct: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHDKQLKQGRPRKGSTDLQGSEELHGG 60

Query: 61  AAVATVMKAKAVYGGANDIHHGRSKNDANSLWIKSISSLVWQVSFGFLGFCLVVKD 113
           AAV TVM+AKAVYGGANDIHHGRSKNDANSL IKSISSLVW+VSFGFLGFCL+VKD
Sbjct: 61  AAVVTVMRAKAVYGGANDIHHGRSKNDANSLRIKSISSLVWKVSFGFLGFCLIVKD 116

[Close]

BLAST of Chy2G044000 vs. NCBI nr
Match: XP_022988599.1 (uncharacterized protein LOC111485797 [Cucurbita maxima])

HSP 1 Score: 130 bits (326), Expect = 2.17e-36
Identity = 67/111 (60.36%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 1   MKKGLLLLFLFSIIFLYLIPFCLCETNFTTKADDHNKQLKQGRPRKDVQGSEELHVGAAV 60
           M+KG  LL L S++ L L+PFCL E  FT KA D  K LKQGRPRKD+Q SE+++VGAA 
Sbjct: 1   MRKGPFLLLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQASEQINVGAAT 60

Query: 61  ATVMKAKAVYGGANDIHHGRSKNDANSLWIKSISSLVWQVSFGFLGFCLVV 111
             VM+A+ VYGG NDIH G SKNDAN L IKS SSL+W+VS GF   C+++
Sbjct: 61  R-VMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWEVSCGFFSLCVLL 110

[Close]

BLAST of Chy2G044000 vs. NCBI nr
Match: XP_023516536.1 (uncharacterized protein LOC111780387 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 129 bits (323), Expect = 6.21e-36
Identity = 67/111 (60.36%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 1   MKKGLLLLFLFSIIFLYLIPFCLCETNFTTKADDHNKQLKQGRPRKDVQGSEELHVGAAV 60
           M+KG  LL L S++ L L+PFCL E  FT KA D  K LKQGRPRKD+Q S+++ VGAA 
Sbjct: 1   MRKGPFLLLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQIKVGAAT 60

Query: 61  ATVMKAKAVYGGANDIHHGRSKNDANSLWIKSISSLVWQVSFGFLGFCLVV 111
            TVM+A+ VYGG NDIH G SKNDAN L IKS SSL+W VS GF   C+++
Sbjct: 61  -TVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVSCGFFSLCVLL 110

[Close]

BLAST of Chy2G044000 vs. NCBI nr
Match: XP_022921746.1 (uncharacterized protein LOC111429900 [Cucurbita moschata])

HSP 1 Score: 128 bits (322), Expect = 8.82e-36
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 1   MKKGLLLLFLFSIIFLYLIPFCLCETNFTTKADDHNKQLKQGRPRKDVQGSEELHVGAAV 60
           M+KG  LL L S++ L L+PFCL E +FT KA D  K LKQGRPRKD+Q S++++VGAA 
Sbjct: 1   MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAAT 60

Query: 61  ATVMKAKAVYGGANDIHHGRSKNDANSLWIKSISSLVWQVSFGFLGFCLVV 111
             VM+A+ VYGG NDIH G SKNDAN L IKS SSL+W VS GF   C+++
Sbjct: 61  K-VMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVSCGFFSLCVLL 110

The following BLAST results are available for this feature:

BLAST of Chy2G044000 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G044000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW17	1.7e-52	92.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257310 PE=4 SV=1	[more]
A0A5A7SWW6	1.5e-48	87.07	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1JM10	2.1e-26	60.36	uncharacterized protein LOC111485797 OS=Cucurbita maxima OX=3661 GN=LOC111485797...	[more]
A0A6J1E284	6.2e-26	59.46	uncharacterized protein LOC111429900 OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]
A0A6J1C4Y5	1.9e-14	49.14	uncharacterized protein LOC111007432 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]

BLAST of Chy2G044000 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65174.1	1.64e-70	92.11	hypothetical protein Csa_019558 [Cucumis sativus]	[more]
KAA0035098.1	4.22e-65	87.07	uncharacterized protein E6C27_scaffold57G001730 [Cucumis melo var. makuwa] >TYJ9...	[more]
XP_022988599.1	2.17e-36	60.36	uncharacterized protein LOC111485797 [Cucurbita maxima]	[more]
XP_023516536.1	6.21e-36	60.36	uncharacterized protein LOC111780387 [Cucurbita pepo subsp. pepo]	[more]
XP_022921746.1	8.82e-36	59.46	uncharacterized protein LOC111429900 [Cucurbita moschata]	[more]

BLAST of Chy2G044000 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G044000.1	Chy2G044000.1	mRNA