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Chy2G040710 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAATTCCTCCAAATCACCCGATGATCGGAAAACCCGCTTCTATCATCCTTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAGCTCCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAAGCCGCCAGGCCTCACCGTTCTTGGGGCGAAAACCTCCAATACTACACCGGAATTGGCTACCTCTCCGGCGCCCTTCTTGGCGGCGCCAGGGGTTCCATTCAGGGCCTCAGGGCAGCTGAGCCCGGTGACTCTGTCAAACTCCGTCTCAATCGAGTTCTCAACTCTGGGGGCCAGCTTGGCCGGAGGGCTGGAAACTCCCTTGGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCATTTGAGAGGTTCTGATGATGTTTTAAACAGTATTGTAGCTGGATTGGGGACTGGTGCTGTTTATAAGGCGGCGTCTGGGCCAAGGTCGGCTGCCATCGCGGGTGCTATTGGAGGAATTGCTGCTGCAGCTGCAGTTGCGGGTAAGCAGGCAGTTAAGAGATATGTGCCGATATAGAATTGGCATAACAAGTTATGCAAATTTGTATTAACTAGAGGGAGGATTTGCACAGTAAAGCATTTGGTTTCTTTGATTATTATTTCTTCATATTGTTACACAGTTAGTTTATTATTCATGGTTTAGTGAATAATACACTTTTGGCTTGCAAATGCTCGCTCTTATAATTTGTAATTGTTATTCATTTTGTTCATTTGCCTCTTATAGTTATTGATGCCCTGGATATGGGAGACTTTAAATTGGTGTTTGATTAA ATGGAAAATTCCTCCAAATCACCCGATGATCGGAAAACCCGCTTCTATCATCCTTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAGCTCCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAAGCCGCCAGGCCTCACCGTTCTTGGGGCGAAAACCTCCAATACTACACCGGAATTGGCTACCTCTCCGGCGCCCTTCTTGGCGGCGCCAGGGGTTCCATTCAGGGCCTCAGGGCAGCTGAGCCCGGTGACTCTGTCAAACTCCGTCTCAATCGAGTTCTCAACTCTGGGGGCCAGCTTGGCCGGAGGGCTGGAAACTCCCTTGGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCATTTGAGAGGTTCTGATGATGTTTTAAACAGTATTGTAGCTGGATTGGGGACTGGTGCTGTTTATAAGGCGGCGTCTGGGCCAAGGTCGGCTGCCATCGCGGGTGCTATTGGAGGAATTGCTGCTGCAGCTGCAGTTGCGGTTATTGATGCCCTGGATATGGGAGACTTTAAATTGGTGTTTGATTAA ATGGAAAATTCCTCCAAATCACCCGATGATCGGAAAACCCGCTTCTATCATCCTTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAGCTCCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAAGCCGCCAGGCCTCACCGTTCTTGGGGCGAAAACCTCCAATACTACACCGGAATTGGCTACCTCTCCGGCGCCCTTCTTGGCGGCGCCAGGGGTTCCATTCAGGGCCTCAGGGCAGCTGAGCCCGGTGACTCTGTCAAACTCCGTCTCAATCGAGTTCTCAACTCTGGGGGCCAGCTTGGCCGGAGGGCTGGAAACTCCCTTGGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCATTTGAGAGGTTCTGATGATGTTTTAAACAGTATTGTAGCTGGATTGGGGACTGGTGCTGTTTATAAGGCGGCGTCTGGGCCAAGGTCGGCTGCCATCGCGGGTGCTATTGGAGGAATTGCTGCTGCAGCTGCAGTTGCGGTTATTGATGCCCTGGATATGGGAGACTTTAAATTGGTGTTTGATTAA MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAVIDALDMGDFKLVFD* Homology
BLAST of Chy2G040710 vs. ExPASy Swiss-Prot
Match: Q9LNQ1 (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis thaliana OX=3702 GN=TIM23-1 PE=2 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 3.1e-48 Identity = 99/174 (56.90%), Postives = 127/174 (72.99%), Query Frame = 0
BLAST of Chy2G040710 vs. ExPASy Swiss-Prot
Match: Q9S837 (Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis thaliana OX=3702 GN=TIM23-3 PE=2 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.2e-47 Identity = 96/173 (55.49%), Postives = 132/173 (76.30%), Query Frame = 0
BLAST of Chy2G040710 vs. ExPASy Swiss-Prot
Match: Q38820 (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis thaliana OX=3702 GN=TIM23-2 PE=1 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 5.9e-47 Identity = 98/173 (56.65%), Postives = 125/173 (72.25%), Query Frame = 0
BLAST of Chy2G040710 vs. ExPASy Swiss-Prot
Match: Q9USM7 (Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tim23 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.4e-16 Identity = 58/155 (37.42%), Postives = 85/155 (54.84%), Query Frame = 0
BLAST of Chy2G040710 vs. ExPASy Swiss-Prot
Match: P32897 (Mitochondrial import inner membrane translocase subunit TIM23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TIM23 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.8e-12 Identity = 51/125 (40.80%), Postives = 70/125 (56.00%), Query Frame = 0
BLAST of Chy2G040710 vs. ExPASy TrEMBL
Match: A0A5A7V5P8 (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001650 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 1.2e-87 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of Chy2G040710 vs. ExPASy TrEMBL
Match: A0A1S3CJ69 (mitochondrial import inner membrane translocase subunit TIM23-2 OS=Cucumis melo OX=3656 GN=LOC103501018 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 1.2e-87 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of Chy2G040710 vs. ExPASy TrEMBL
Match: A0A0A0M0I6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690355 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.0e-86 Identity = 170/172 (98.84%), Postives = 171/172 (99.42%), Query Frame = 0
BLAST of Chy2G040710 vs. ExPASy TrEMBL
Match: A0A6J1JGM0 (mitochondrial import inner membrane translocase subunit TIM23-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485524 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 6.2e-84 Identity = 168/173 (97.11%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of Chy2G040710 vs. ExPASy TrEMBL
Match: A0A6J1H9R2 (mitochondrial import inner membrane translocase subunit TIM23-2-like OS=Cucurbita moschata OX=3662 GN=LOC111461819 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 2.4e-83 Identity = 167/173 (96.53%), Postives = 170/173 (98.27%), Query Frame = 0
BLAST of Chy2G040710 vs. NCBI nr
Match: XP_008462719.1 (PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2 [Cucumis melo] >KAA0062574.1 mitochondrial import inner membrane translocase subunit TIM23-2 [Cucumis melo var. makuwa] >TYK28799.1 mitochondrial import inner membrane translocase subunit TIM23-2 [Cucumis melo var. makuwa]) HSP 1 Score: 331 bits (848), Expect = 1.21e-113 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of Chy2G040710 vs. NCBI nr
Match: XP_004142525.2 (LOW QUALITY PROTEIN: mitochondrial import inner membrane translocase subunit TIM23-3 [Cucumis sativus] >XP_031736235.1 LOW QUALITY PROTEIN: mitochondrial import inner membrane translocase subunit TIM23-3 [Cucumis sativus]) HSP 1 Score: 323 bits (829), Expect = 9.51e-111 Identity = 168/172 (97.67%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Chy2G040710 vs. NCBI nr
Match: XP_022988221.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita maxima]) HSP 1 Score: 318 bits (816), Expect = 9.44e-109 Identity = 168/173 (97.11%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of Chy2G040710 vs. NCBI nr
Match: XP_038878582.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Benincasa hispida]) HSP 1 Score: 318 bits (814), Expect = 1.84e-108 Identity = 165/172 (95.93%), Postives = 168/172 (97.67%), Query Frame = 0
BLAST of Chy2G040710 vs. NCBI nr
Match: XP_022961272.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita moschata] >XP_023534786.1 mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita pepo subsp. pepo] >KAG6590277.1 Mitochondrial import inner membrane translocase subunit TIM23-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033438.1 Mitochondrial import inner membrane translocase subunit TIM23-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 317 bits (811), Expect = 5.45e-108 Identity = 167/173 (96.53%), Postives = 170/173 (98.27%), Query Frame = 0
BLAST of Chy2G040710 vs. TAIR 10
Match: AT1G17530.1 (translocase of inner mitochondrial membrane 23 ) HSP 1 Score: 193.0 bits (489), Expect = 2.2e-49 Identity = 99/174 (56.90%), Postives = 127/174 (72.99%), Query Frame = 0
BLAST of Chy2G040710 vs. TAIR 10
Match: AT3G04800.1 (translocase inner membrane subunit 23-3 ) HSP 1 Score: 191.0 bits (484), Expect = 8.4e-49 Identity = 96/173 (55.49%), Postives = 132/173 (76.30%), Query Frame = 0
BLAST of Chy2G040710 vs. TAIR 10
Match: AT1G72750.1 (translocase inner membrane subunit 23-2 ) HSP 1 Score: 188.7 bits (478), Expect = 4.2e-48 Identity = 98/173 (56.65%), Postives = 125/173 (72.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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