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Chy2G040620 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAAGAAACACTTGCAAAGGGTGCCTTCATCCCTGTCCTCGTCGTCATCGTGCCCGTCTCTCCATGAGTCGGAGGACGAGCTGAAGCACATGCCGTTGGCACCACCGCAGTTGAAGAACAAGAAGCGTTTGTCCAAGCAACTTTCAATGTGCGAGACTCCAAGGGACCTTGCATGGGAGAAGCGACGACGACAGATGCTCCGCCCGAGGAACGGCTCAACAGACAGGGACGACTTGACTGATGAGGACTGGAATGAGCTCAAAGGCTGCATTGAACTAGGGTTTGCATTCAATGAGGAATATGGGCACAAGCTGTGTGGTACATTGCCAGCCCTTGACCTTTACTTTGCCGTCAATCGGCAGCTATCGCCAAGTCCCGTGTCAACGCCCCATAGCAGTGCCTCGGCGTCATCATCACTTGGCGGAAGGTCTTCATCTTTTGAAAGCCCCAGGAGTGAGTTTGATACATGGAGGGTTTGTAGCCCAGGTATGAAGATATTGCATTCTGTAGGGATTTTAATTTATTTGCAATTTATAATTGTGAAGTTATTTTGCCCCAATATCTCATTCTTTACATGTTGGAAAATCAAGCTTCTTCAAATGTTACATTGCATATATCAACAAAAACAAAAAAAGAAAAAAGAAAAAAAAAGAAAAAAAAAAGGAAAAAATTCTAAATAAATAAATAAGAAACATCTATATCTTATATTTCGAAGTTAAAATAATTTAATAACCCTTTCGTTTTTTAATTTTTCATCAGATTCTAAAAATAGTTTTTGTGTTCAAAACGAGCTTGACTTTTCAAAATGTTCTAAATTGTATTAAAAAGAAAGATCAAGTCGAATTAGAGTTTATATTCTTAATTCTTAAAAATTAAAAAAAAAAAATCAAATAGATATGAATTGGACCTTAATACCTTTTTTAAATGTTAAAACCTACCTTTCCATATTTCTTTAGCTGCAATAATATTTTAGTCCTTGGAAGGTTCTTTTAAATCTGACATGAAATATTTCATCATAAATCCAACACTTTGCCAAATAAGATTATACTAAATCTGAAGCCACATATCTTCCATCACTTATCAAATTATTAGTGACAACACAAAACATTTTTTCCATAAAATTCAAGGAATAAAATAAATATCATTAAAAGTTGCTACAATCAAATACATCTAGAGATTAAGGCACAGAATATGATTTAGTCTTCTTTTTTCTACAAAGCATATACCCTATTACGATTATTACAATTATTGTATATTTAACAAATATTTTAGAAAATAAAGCTATACACTATTAATTTTTTTTTTTTTTTGATGTACTAAATATGTAGGAGAAGACCCAAAGCAAGTGAAGGCAAAATTAAGACACTGGGCTCAAGCTGTGGCATGTTCAGTAATGCAATCGTTGGGAGAAAAATAA ATGGATAAGAAACACTTGCAAAGGGTGCCTTCATCCCTGTCCTCGTCGTCATCGTGCCCGTCTCTCCATGAGTCGGAGGACGAGCTGAAGCACATGCCGTTGGCACCACCGCAGTTGAAGAACAAGAAGCGTTTGTCCAAGCAACTTTCAATGTGCGAGACTCCAAGGGACCTTGCATGGGAGAAGCGACGACGACAGATGCTCCGCCCGAGGAACGGCTCAACAGACAGGGACGACTTGACTGATGAGGACTGGAATGAGCTCAAAGGCTGCATTGAACTAGGGTTTGCATTCAATGAGGAATATGGGCACAAGCTGTGTGGTACATTGCCAGCCCTTGACCTTTACTTTGCCGTCAATCGGCAGCTATCGCCAAGTCCCGTGTCAACGCCCCATAGCAGTGCCTCGGCGTCATCATCACTTGGCGGAAGGTCTTCATCTTTTGAAAGCCCCAGGAGTGAGTTTGATACATGGAGGGTTTGTAGCCCAGGAGAAGACCCAAAGCAAGTGAAGGCAAAATTAAGACACTGGGCTCAAGCTGTGGCATGTTCAGTAATGCAATCGTTGGGAGAAAAATAA ATGGATAAGAAACACTTGCAAAGGGTGCCTTCATCCCTGTCCTCGTCGTCATCGTGCCCGTCTCTCCATGAGTCGGAGGACGAGCTGAAGCACATGCCGTTGGCACCACCGCAGTTGAAGAACAAGAAGCGTTTGTCCAAGCAACTTTCAATGTGCGAGACTCCAAGGGACCTTGCATGGGAGAAGCGACGACGACAGATGCTCCGCCCGAGGAACGGCTCAACAGACAGGGACGACTTGACTGATGAGGACTGGAATGAGCTCAAAGGCTGCATTGAACTAGGGTTTGCATTCAATGAGGAATATGGGCACAAGCTGTGTGGTACATTGCCAGCCCTTGACCTTTACTTTGCCGTCAATCGGCAGCTATCGCCAAGTCCCGTGTCAACGCCCCATAGCAGTGCCTCGGCGTCATCATCACTTGGCGGAAGGTCTTCATCTTTTGAAAGCCCCAGGAGTGAGTTTGATACATGGAGGGTTTGTAGCCCAGGAGAAGACCCAAAGCAAGTGAAGGCAAAATTAAGACACTGGGCTCAAGCTGTGGCATGTTCAGTAATGCAATCGTTGGGAGAAAAATAA MDKKHLQRVPSSLSSSSSCPSLHESEDELKHMPLAPPQLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRNGSTDRDDLTDEDWNELKGCIELGFAFNEEYGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSASASSSLGGRSSSFESPRSEFDTWRVCSPGEDPKQVKAKLRHWAQAVACSVMQSLGEK* Homology
BLAST of Chy2G040620 vs. ExPASy TrEMBL
Match: A0A0A0LY38 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690230 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 1.5e-101 Identity = 189/192 (98.44%), Postives = 189/192 (98.44%), Query Frame = 0
BLAST of Chy2G040620 vs. ExPASy TrEMBL
Match: A0A1S3CHL5 (uncharacterized protein LOC103501007 OS=Cucumis melo OX=3656 GN=LOC103501007 PE=4 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 3.7e-100 Identity = 186/192 (96.88%), Postives = 190/192 (98.96%), Query Frame = 0
BLAST of Chy2G040620 vs. ExPASy TrEMBL
Match: A0A5A7V807 (Ankyrin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00220 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 2.8e-95 Identity = 178/184 (96.74%), Postives = 182/184 (98.91%), Query Frame = 0
BLAST of Chy2G040620 vs. ExPASy TrEMBL
Match: A0A6J1H8L6 (uncharacterized protein LOC111461542 OS=Cucurbita moschata OX=3662 GN=LOC111461542 PE=4 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 7.5e-93 Identity = 176/191 (92.15%), Postives = 181/191 (94.76%), Query Frame = 0
BLAST of Chy2G040620 vs. ExPASy TrEMBL
Match: A0A6J1JGY3 (uncharacterized protein LOC111485003 OS=Cucurbita maxima OX=3661 GN=LOC111485003 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 2.2e-92 Identity = 176/191 (92.15%), Postives = 180/191 (94.24%), Query Frame = 0
BLAST of Chy2G040620 vs. NCBI nr
Match: XP_004142530.1 (uncharacterized protein LOC101212719 [Cucumis sativus] >KGN66785.1 hypothetical protein Csa_007316 [Cucumis sativus]) HSP 1 Score: 375 bits (963), Expect = 5.96e-131 Identity = 189/192 (98.44%), Postives = 189/192 (98.44%), Query Frame = 0
BLAST of Chy2G040620 vs. NCBI nr
Match: XP_008462705.1 (PREDICTED: uncharacterized protein LOC103501007 [Cucumis melo]) HSP 1 Score: 370 bits (951), Expect = 3.89e-129 Identity = 186/192 (96.88%), Postives = 189/192 (98.44%), Query Frame = 0
BLAST of Chy2G040620 vs. NCBI nr
Match: XP_038878789.1 (uncharacterized protein LOC120070939 [Benincasa hispida]) HSP 1 Score: 362 bits (928), Expect = 1.25e-125 Identity = 183/192 (95.31%), Postives = 185/192 (96.35%), Query Frame = 0
BLAST of Chy2G040620 vs. NCBI nr
Match: KAA0062546.1 (ankyrin-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 354 bits (908), Expect = 1.05e-122 Identity = 178/184 (96.74%), Postives = 181/184 (98.37%), Query Frame = 0
BLAST of Chy2G040620 vs. NCBI nr
Match: XP_023533045.1 (uncharacterized protein LOC111795047 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 350 bits (899), Expect = 4.22e-121 Identity = 178/191 (93.19%), Postives = 183/191 (95.81%), Query Frame = 0
BLAST of Chy2G040620 vs. TAIR 10
Match: AT1G08790.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 201.8 bits (512), Expect = 4.9e-52 Identity = 121/188 (64.36%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of Chy2G040620 vs. TAIR 10
Match: AT5G28690.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 177.2 bits (448), Expect = 1.3e-44 Identity = 108/187 (57.75%), Postives = 130/187 (69.52%), Query Frame = 0
BLAST of Chy2G040620 vs. TAIR 10
Match: AT3G04700.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 174.9 bits (442), Expect = 6.4e-44 Identity = 95/159 (59.75%), Postives = 116/159 (72.96%), Query Frame = 0
BLAST of Chy2G040620 vs. TAIR 10
Match: AT3G04710.3 (ankyrin repeat family protein ) HSP 1 Score: 168.7 bits (426), Expect = 4.6e-42 Identity = 91/156 (58.33%), Postives = 113/156 (72.44%), Query Frame = 0
BLAST of Chy2G040620 vs. TAIR 10
Match: AT2G43340.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19 Identity = 64/174 (36.78%), Postives = 95/174 (54.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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