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Chy2G040600 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTATCAATAGAACCAAGTGAAATAGAAAGATCTCCAACATCATTTGGGAAGGAAGAATGGACCGAGATACACAAAGAAATGGCTTTTATAATTTTCCTCCTTCATCTCCTTTGTATTTTTGCACCCTTTCAATTTAGTTGGAGTGCATTATGGGTTGCTGTGGCATTATATGTTAGTATGGGTCTCTTTGGTATGAGTCTTTCGTATCATAGAAATCTTTCGCACAAGAGTTTCAAGCTTCCAAAATGGCTCGAGTACTTGTTTGCTTATTGTGGAGTTCAAGCACTTGAGGTTAATTAAATAATAAACTTTGAATTAAAGCATGTTAAAATATATTGAGTGTGTTTAAAATTATATTATATACATATTTTTTTGAGGGAGATCCAATCAATTGGGTGAGTATGCATAGATACCACCACCAAGTTGCTGATACTAATAAAGACCCACAACGTCCTGAGCAAAGATTTTTATTGCTTTCAAATTACTATGCTTCAAATAAAAGATTTAATTCGAGGTACTTTGTTAGTTTCATCCCGTTGCTCTTGCATCTTACTATATGTTGTTGGAGGAATGCCTTTTTTCATATTGGGAATGGTAAA ATGGATGTATCAATAGAACCAAGTGAAATAGAAAGATCTCCAACATCATTTGGGAAGGAAGAATGGACCGAGATACACAAAGAAATGGCTTTTATAATTTTCCTCCTTCATCTCCTTTGTATTTTTGCACCCTTTCAATTTAGTTGGAGTGCATTATGGGGAGATCCAATCAATTGGGTGAGTATGCATAGATACCACCACCAAGTTGCTGATACTAATAAAGACCCACAACGTCCTGAGCAAAGATTTTTATTGCTTTCAAATTACTATGCTTCAAATAAAAGATTTAATTCGAGGTACTTTGTTAGTTTCATCCCGTTGCTCTTGCATCTTACTATATGTTGTTGGAGGAATGCCTTTTTTCATATTGGGAATGGTAAA ATGGATGTATCAATAGAACCAAGTGAAATAGAAAGATCTCCAACATCATTTGGGAAGGAAGAATGGACCGAGATACACAAAGAAATGGCTTTTATAATTTTCCTCCTTCATCTCCTTTGTATTTTTGCACCCTTTCAATTTAGTTGGAGTGCATTATGGGGAGATCCAATCAATTGGGTGAGTATGCATAGATACCACCACCAAGTTGCTGATACTAATAAAGACCCACAACGTCCTGAGCAAAGATTTTTATTGCTTTCAAATTACTATGCTTCAAATAAAAGATTTAATTCGAGGTACTTTGTTAGTTTCATCCCGTTGCTCTTGCATCTTACTATATGTTGTTGGAGGAATGCCTTTTTTCATATTGGGAATGGTAAA MDVSIEPSEIERSPTSFGKEEWTEIHKEMAFIIFLLHLLCIFAPFQFSWSALWGDPINWVSMHRYHHQVADTNKDPQRPEQRFLLLSNYYASNKRFNSRYFVSFIPLLLHLTICCWRNAFFHIGNGK Homology
BLAST of Chy2G040600 vs. ExPASy Swiss-Prot
Match: O65797 (Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis thaliana OX=3702 GN=ADS1 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 9.6e-09 Identity = 34/126 (26.98%), Postives = 51/126 (40.48%), Query Frame = 0
BLAST of Chy2G040600 vs. ExPASy Swiss-Prot
Match: Q9LVZ3 (Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADS3.2 PE=2 SV=3) HSP 1 Score: 58.5 bits (140), Expect = 6.2e-08 Identity = 35/119 (29.41%), Postives = 42/119 (35.29%), Query Frame = 0
BLAST of Chy2G040600 vs. ExPASy Swiss-Prot
Match: Q9FV68 (Icosanoyl-CoA 5-desaturase (Fragment) OS=Limnanthes douglasii OX=28973 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.1e-08 Identity = 34/121 (28.10%), Postives = 42/121 (34.71%), Query Frame = 0
BLAST of Chy2G040600 vs. ExPASy Swiss-Prot
Match: Q9LND8 (Delta-9 desaturase-like 2 protein OS=Arabidopsis thaliana OX=3702 GN=At1g06100 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07 Identity = 31/127 (24.41%), Postives = 50/127 (39.37%), Query Frame = 0
BLAST of Chy2G040600 vs. ExPASy Swiss-Prot
Match: Q9SID2 (Delta-9 acyl-lipid desaturase 2 OS=Arabidopsis thaliana OX=3702 GN=ADS2 PE=2 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 1.8e-07 Identity = 32/112 (28.57%), Postives = 41/112 (36.61%), Query Frame = 0
BLAST of Chy2G040600 vs. ExPASy TrEMBL
Match: A0A5D3DZT8 (Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001150 PE=3 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39 Identity = 92/150 (61.33%), Postives = 95/150 (63.33%), Query Frame = 0
BLAST of Chy2G040600 vs. ExPASy TrEMBL
Match: A0A6J1JGI0 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111485493 PE=3 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 3.8e-24 Identity = 67/146 (45.89%), Postives = 76/146 (52.05%), Query Frame = 0
BLAST of Chy2G040600 vs. ExPASy TrEMBL
Match: A0A6J1H9D0 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461702 PE=3 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 5.6e-20 Identity = 60/131 (45.80%), Postives = 67/131 (51.15%), Query Frame = 0
BLAST of Chy2G040600 vs. ExPASy TrEMBL
Match: A0A6J1GWB1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458011 PE=3 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 4.4e-17 Identity = 53/129 (41.09%), Postives = 62/129 (48.06%), Query Frame = 0
BLAST of Chy2G040600 vs. ExPASy TrEMBL
Match: A0A6J1DIY2 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111020911 PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.7e-16 Identity = 52/129 (40.31%), Postives = 60/129 (46.51%), Query Frame = 0
BLAST of Chy2G040600 vs. NCBI nr
Match: TYK28760.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase [Cucumis melo var. makuwa]) HSP 1 Score: 172 bits (435), Expect = 1.95e-51 Identity = 92/150 (61.33%), Postives = 95/150 (63.33%), Query Frame = 0
BLAST of Chy2G040600 vs. NCBI nr
Match: XP_038879870.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 142 bits (358), Expect = 1.23e-38 Identity = 79/151 (52.32%), Postives = 88/151 (58.28%), Query Frame = 0
BLAST of Chy2G040600 vs. NCBI nr
Match: XP_022988176.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 120 bits (301), Expect = 3.94e-30 Identity = 67/146 (45.89%), Postives = 77/146 (52.74%), Query Frame = 0
BLAST of Chy2G040600 vs. NCBI nr
Match: XP_023533044.1 (acyl-CoA C20 Delta5-desaturase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 113 bits (283), Expect = 6.15e-27 Identity = 64/144 (44.44%), Postives = 73/144 (50.69%), Query Frame = 0
BLAST of Chy2G040600 vs. NCBI nr
Match: XP_022961086.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 107 bits (266), Expect = 4.96e-25 Identity = 60/131 (45.80%), Postives = 67/131 (51.15%), Query Frame = 0
BLAST of Chy2G040600 vs. TAIR 10
Match: AT1G06080.1 (delta 9 desaturase 1 ) HSP 1 Score: 61.2 bits (147), Expect = 6.8e-10 Identity = 34/126 (26.98%), Postives = 51/126 (40.48%), Query Frame = 0
BLAST of Chy2G040600 vs. TAIR 10
Match: AT3G15870.1 (Fatty acid desaturase family protein ) HSP 1 Score: 58.5 bits (140), Expect = 4.4e-09 Identity = 35/119 (29.41%), Postives = 42/119 (35.29%), Query Frame = 0
BLAST of Chy2G040600 vs. TAIR 10
Match: AT1G06100.1 (Fatty acid desaturase family protein ) HSP 1 Score: 57.4 bits (137), Expect = 9.8e-09 Identity = 31/127 (24.41%), Postives = 50/127 (39.37%), Query Frame = 0
BLAST of Chy2G040600 vs. TAIR 10
Match: AT1G06350.1 (Fatty acid desaturase family protein ) HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08 Identity = 29/114 (25.44%), Postives = 48/114 (42.11%), Query Frame = 0
BLAST of Chy2G040600 vs. TAIR 10
Match: AT2G31360.1 (16:0delta9 desaturase 2 ) HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08 Identity = 32/112 (28.57%), Postives = 41/112 (36.61%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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