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Chy2G040500 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGGCTTGGATGGTGAGCAAAAAGAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTCTTTATCAAACTTTGAATCGCCCAGCTCAAACTGAACGCGATGGAATCAAACTTATGGTTGAGGCCGTAGAGAATATAAAGCCCATATGCGAAGTCGAAAAAGTCAGAGTAGCAGCTACTTTTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGATGAGATACTGGATGCTTACCGAAAGAGGGGAATTGCACGTAAGAAAAGGGAGAATCTTCATAGACTGGCTTCCACCAATCGAAGTTTCGCGCACTCATAATTCATTAGATACTTTTTCTGAATGTCAACTAAGTATCGTAAGTAAATTACTCCCGGTTGTTCAATCATTTGATAACCAGAGTCATTCTTTGATAAATGATCACTATGAGTCAGACTCAATAGAATTTGATCAATCCTTTTTTCTGTCTCCGTGGGGGAATGTTGAGAGTTGCATGAGGTGCAAAGAATATTGCTCATTTTAGTGGGAATAAATTAGCAGCCTCACCGGCCATGGAATGGAGCCTTTCGTAATGAGTATTTTTTAGAGGAATGAAAGAATGAAGTTGCGAGACTAAACCGGAGACTTTCTATTTGTTAATTACCTTTTATCATGAATCAGAGATCGAGCAAGGAGGAGCTAAAAAAAACTAA ATGGGGGGCTTGGATGGTGAGCAAAAAGAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTCTTTATCAAACTTTGAATCGCCCAGCTCAAACTGAACGCGATGGAATCAAACTTATGGTTGAGGCCGTAGAGAATATAAAGCCCATATGCGAAGTCGAAAAAGTCAGAGTAGCAGCTACTTTTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGATGAGATACTGGATGCTTACCGAAAGAGGGGAATTGCACAGATCGAGCAAGGAGGAGCTAAAAAAAACTAA ATGGGGGGCTTGGATGGTGAGCAAAAAGAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTCTTTATCAAACTTTGAATCGCCCAGCTCAAACTGAACGCGATGGAATCAAACTTATGGTTGAGGCCGTAGAGAATATAAAGCCCATATGCGAAGTCGAAAAAGTCAGAGTAGCAGCTACTTTTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGATGAGATACTGGATGCTTACCGAAAGAGGGGAATTGCACAGATCGAGCAAGGAGGAGCTAAAAAAAACTAA MGGLDGEQKELIKKLVNFRMKEGKRTRVRAILYQTLNRPAQTERDGIKLMVEAVENIKPICEVEKVRVAATFYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYRKRGIAQIEQGGAKKN* Homology
BLAST of Chy2G040500 vs. ExPASy Swiss-Prot
Match: P92557 (Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS7 PE=1 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 5.5e-55 Identity = 111/126 (88.10%), Postives = 117/126 (92.86%), Query Frame = 0
BLAST of Chy2G040500 vs. ExPASy Swiss-Prot
Match: Q9MF82 (Ribosomal protein S7, mitochondrial OS=Beta vulgaris OX=161934 GN=RPS7 PE=2 SV=2) HSP 1 Score: 211.5 bits (537), Expect = 6.1e-54 Identity = 107/126 (84.92%), Postives = 117/126 (92.86%), Query Frame = 0
BLAST of Chy2G040500 vs. ExPASy Swiss-Prot
Match: Q01902 (Ribosomal protein S7, mitochondrial OS=Triticum aestivum OX=4565 GN=RPS7 PE=3 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 2.8e-51 Identity = 105/126 (83.33%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of Chy2G040500 vs. ExPASy Swiss-Prot
Match: P26867 (Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS7 PE=3 SV=2) HSP 1 Score: 131.3 bits (329), Expect = 8.1e-30 Identity = 71/125 (56.80%), Postives = 99/125 (79.20%), Query Frame = 0
BLAST of Chy2G040500 vs. ExPASy Swiss-Prot
Match: A1WVC6 (30S ribosomal protein S7 OS=Halorhodospira halophila (strain DSM 244 / SL1) OX=349124 GN=rpsG PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.1e-13 Identity = 48/116 (41.38%), Postives = 66/116 (56.90%), Query Frame = 0
BLAST of Chy2G040500 vs. ExPASy TrEMBL
Match: G3EIX5 (Ribosomal protein S7 OS=Cucumis sativus OX=3659 GN=rps7 PE=3 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.4e-61 Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Chy2G040500 vs. ExPASy TrEMBL
Match: A0A5A7UX17 (Ribosomal protein S7 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold45385G00030 PE=3 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57 Identity = 120/128 (93.75%), Postives = 121/128 (94.53%), Query Frame = 0
BLAST of Chy2G040500 vs. ExPASy TrEMBL
Match: A0A5D3DUQ4 (Ribosomal protein S7 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold81675G00010 PE=3 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.8e-57 Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 0
BLAST of Chy2G040500 vs. ExPASy TrEMBL
Match: G3EU25 (Ribosomal protein S7 OS=Cucumis melo subsp. melo OX=412675 GN=rps7 PE=3 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.8e-57 Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 0
BLAST of Chy2G040500 vs. ExPASy TrEMBL
Match: A0A3Q9CRZ5 (Ribosomal protein S7 OS=Cucumis melo var. momordica OX=2034244 GN=rps7 PE=3 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.8e-57 Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 0
BLAST of Chy2G040500 vs. NCBI nr
Match: YP_004849323.1 (ribosomal protein S7 [Cucumis sativus] >ADZ10750.1 ribosomal protein S7 [Cucumis sativus]) HSP 1 Score: 242 bits (618), Expect = 5.08e-80 Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Chy2G040500 vs. NCBI nr
Match: AEN56109.1 (ribosomal protein S7 [Cucumis melo subsp. melo] >AZP40303.1 ribosomal protein S7 [Cucumis melo var. momordica] >TYK27456.1 ribosomal protein S7 [Cucumis melo var. makuwa]) HSP 1 Score: 229 bits (583), Expect = 1.10e-74 Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 0
BLAST of Chy2G040500 vs. NCBI nr
Match: XP_004153644.3 (uncharacterized protein LOC101218585 [Cucumis sativus] >KAE8648345.1 hypothetical protein Csa_023144 [Cucumis sativus]) HSP 1 Score: 225 bits (574), Expect = 2.67e-73 Identity = 116/125 (92.80%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of Chy2G040500 vs. NCBI nr
Match: WP_131796637.1 (30S ribosomal protein S7 [Candidatus Frankia datiscae]) HSP 1 Score: 223 bits (567), Expect = 3.02e-72 Identity = 116/134 (86.57%), Postives = 123/134 (91.79%), Query Frame = 0
BLAST of Chy2G040500 vs. NCBI nr
Match: YP_009241662.1 (ribosomal protein S7 [Ziziphus jujuba] >YP_009565404.1 ribosomal protein S7 [Morus notabilis] >YP_009913635.1 ribosomal protein S7 [Luffa acutangula] >QWQ49870.1 ribosomal protein S7 [Zelkova schneideriana] >AMP43645.1 ribosomal protein S7 [Ziziphus jujuba] >QBB08761.1 ribosomal protein S7 [Morus notabilis] >QLJ93024.1 ribosomal protein S7 [Luffa acutangula]) HSP 1 Score: 222 bits (566), Expect = 4.29e-72 Identity = 115/126 (91.27%), Postives = 120/126 (95.24%), Query Frame = 0
BLAST of Chy2G040500 vs. TAIR 10
Match: AT2G07696.1 (Ribosomal protein S7p/S5e family protein ) HSP 1 Score: 214.9 bits (546), Expect = 3.9e-56 Identity = 111/126 (88.10%), Postives = 117/126 (92.86%), Query Frame = 0
BLAST of Chy2G040500 vs. TAIR 10
Match: ATMG01270.1 (mitochondrial ribosomal protein S7 ) HSP 1 Score: 214.9 bits (546), Expect = 3.9e-56 Identity = 111/126 (88.10%), Postives = 117/126 (92.86%), Query Frame = 0
BLAST of Chy2G040500 vs. TAIR 10
Match: ATCG01240.1 (ribosomal protein S7 ) HSP 1 Score: 51.2 bits (121), Expect = 7.5e-07 Identity = 35/122 (28.69%), Postives = 66/122 (54.10%), Query Frame = 0
BLAST of Chy2G040500 vs. TAIR 10
Match: ATCG00900.1 (Ribosomal protein S7p/S5e family protein ) HSP 1 Score: 51.2 bits (121), Expect = 7.5e-07 Identity = 35/122 (28.69%), Postives = 66/122 (54.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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