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Chy2G040270 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGCTACAGTTGCATTGGCTGTGGTTCTCAGTAATGATCCGTTAACTGAATTGCTATAATCGTATCTCTCCTCTAGCTAATTTTTTGCATCTTTTGAATCATATTTCAGTCAAGGTTACATTTTCACACTAGCTCTCTTGTAGTTATTTGTAACTAAACAAGTAATGAAGGCCCCTCTGAATTTTAAAGTATTCGTGTCGTGCTTTTATTTTTATCTCAATTTTAGTTGTGTTGCGTTAACCTTTGCCAGACTCAATGGATGCCCCAGCTGAAGAAGACATTCCTCTAAGGCCTCGGGTTAAGGTCTCATTTTGCCTAGGATCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACCCTTTCTGAGCAGCTGATTTCCATGAAAGAGGATAGCATGGCCATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAATGATGTCCCTGACGACCTAGTTGAAGAAGCTTCTGAGGACGATGATGAAATCACTGAAAAACCTCAAGTGAAGGCAAAGAAGACAAAAGTAACATAA ATGATTGCTACAGTTGCATTGGCTGTGGTTCTCAACTCAATGGATGCCCCAGCTGAAGAAGACATTCCTCTAAGGCCTCGGGTTAAGGTCTCATTTTGCCTAGGATCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACCCTTTCTGAGCAGCTGATTTCCATGAAAGAGGATAGCATGGCCATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAATGATGTCCCTGACGACCTAGTTGAAGAAGCTTCTGAGGACGATGATGAAATCACTGAAAAACCTCAAGTGAAGGCAAAGAAGACAAAAGTAACATAA ATGATTGCTACAGTTGCATTGGCTGTGGTTCTCAACTCAATGGATGCCCCAGCTGAAGAAGACATTCCTCTAAGGCCTCGGGTTAAGGTCTCATTTTGCCTAGGATCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACCCTTTCTGAGCAGCTGATTTCCATGAAAGAGGATAGCATGGCCATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAATGATGTCCCTGACGACCTAGTTGAAGAAGCTTCTGAGGACGATGATGAAATCACTGAAAAACCTCAAGTGAAGGCAAAGAAGACAAAAGTAACATAA MIATVALAVVLNSMDAPAEEDIPLRPRVKVSFCLGSETHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNVPNDVPDDLVEEASEDDDEITEKPQVKAKKTKVT* Homology
BLAST of Chy2G040270 vs. ExPASy TrEMBL
Match: A0A5A7SX16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002390 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 3.6e-44 Identity = 101/111 (90.99%), Postives = 104/111 (93.69%), Query Frame = 0
BLAST of Chy2G040270 vs. ExPASy TrEMBL
Match: A0A1S3B8U1 (uncharacterized protein LOC103487289 OS=Cucumis melo OX=3656 GN=LOC103487289 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 4.4e-42 Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 0
BLAST of Chy2G040270 vs. ExPASy TrEMBL
Match: A0A5D3DZN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G00090 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.2e-41 Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of Chy2G040270 vs. ExPASy TrEMBL
Match: A0A0A0M0V3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G679550 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 8.3e-41 Identity = 90/93 (96.77%), Postives = 91/93 (97.85%), Query Frame = 0
BLAST of Chy2G040270 vs. ExPASy TrEMBL
Match: A0A6J1G9M3 (uncharacterized protein LOC111452065 OS=Cucurbita moschata OX=3662 GN=LOC111452065 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.0e-31 Identity = 78/94 (82.98%), Postives = 84/94 (89.36%), Query Frame = 0
BLAST of Chy2G040270 vs. NCBI nr
Match: KAA0035148.1 (uncharacterized protein E6C27_scaffold57G002390 [Cucumis melo var. makuwa]) HSP 1 Score: 187 bits (476), Expect = 2.07e-59 Identity = 101/111 (90.99%), Postives = 104/111 (93.69%), Query Frame = 0
BLAST of Chy2G040270 vs. NCBI nr
Match: XP_008443784.1 (PREDICTED: uncharacterized protein LOC103487289 [Cucumis melo]) HSP 1 Score: 180 bits (457), Expect = 1.12e-56 Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 0
BLAST of Chy2G040270 vs. NCBI nr
Match: TYK29223.1 (uncharacterized protein E5676_scaffold1228G00090 [Cucumis melo var. makuwa]) HSP 1 Score: 178 bits (451), Expect = 7.66e-56 Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of Chy2G040270 vs. NCBI nr
Match: XP_011660264.1 (uncharacterized protein LOC105436354 [Cucumis sativus] >XP_031736764.1 uncharacterized protein LOC105436354 [Cucumis sativus] >KGN66757.1 hypothetical protein Csa_007293 [Cucumis sativus]) HSP 1 Score: 176 bits (446), Expect = 4.44e-55 Identity = 90/93 (96.77%), Postives = 91/93 (97.85%), Query Frame = 0
BLAST of Chy2G040270 vs. NCBI nr
Match: XP_022948365.1 (uncharacterized protein LOC111452065 [Cucurbita moschata]) HSP 1 Score: 145 bits (365), Expect = 1.03e-42 Identity = 78/94 (82.98%), Postives = 84/94 (89.36%), Query Frame = 0
BLAST of Chy2G040270 vs. TAIR 10
Match: AT1G47820.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47813.1); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 5.5e-13 Identity = 40/96 (41.67%), Postives = 62/96 (64.58%), Query Frame = 0
BLAST of Chy2G040270 vs. TAIR 10
Match: AT1G47820.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47813.1); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 5.5e-13 Identity = 40/96 (41.67%), Postives = 62/96 (64.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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