Chy2G026690 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G026690
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Autophagy-related protein
Location	chrH02: 2547682 .. 2548954 (+)
RNA-Seq Expression	Chy2G026690
Synteny	Chy2G026690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAGAAGTTCGTTCAAACTCGGAATTCCTTTGGGTAATCATCTATTTTTAGTTTCACTTGAATTGCTTAGAATTTGATTGGTTTTGTGACCTTATTTGTATTCGTGTTCTGTTTGTTCCTCTTTTGGGTAATTCTGCTTTGGTAGAATCTAACAGGCTACAATCAGAATTATGTGATATTTAATGCTTTAATTGTTATCACTTACTCTGTTGGGATATTCACTTCTCAGAAAAGAGGCTGGCTGAAGCTGCTCGTATAAGAGAGAAGTATCCGGATAGAATACCTGTATGAATAATGTTATTGATTTAGTTCTTCACTTCGTATGGTGTTCTAAATTTATTTTGGTTTTGGTGCTGATGCAATTAAGTTAATCAGGTGATTGTCGAGAAAGGTGGGAGGTGTGACATTGCTGATATTGATAGGAACAAGTACCTCTCTCTTTCTCTATTCTCTTCATGAATTGGTGAATTAGCATAAATTGATGATGAGATGTTACCGCATTCTTAACTGATAAATTAAAGTAGAAACCAGCCTATATGTTAGTAGCTGCTGCAGTAATATGACAGAATTAAAATAATGGAGACGATAGCATGTAGTTTGAATGTTCAGTTCACTAAAAACAGACGTACCAAGATCAATCATATGAATCATGGTTGACTTGAAAGATTTCAATGGCTTTCAGATTGTAACTTCATTGGATTGACTATTGACTGATACATGGAATGAAATCAATAGAGCTAGTGCCAACAAAGCCAAAAAAAACCCATATTTAAATGTCATGTTACAGCAGTAAATCAAGTCCCGTGATTGATACTGTATAATTGTGCATAAATCTTAAACACAAAAAAGCATTGTGTTGTTATAAGCACATGGATGATCCATTTTGAAAGTTGCCAATATCTTATACTTGAACAGTTTTCATCAAGTGTGGTGTGGCATTTTTTCATCTTTCCCATTGCAGATACCTCGTCCCCAAGGATTTAACTGTTGGACAGTTTGTTTACGTTGTTCGGAAACGGATTAAGCTTAGTGCTGAGAAAGCTATATTTGTGTTTGTGAAGGACACTCTACCATCAACTGGTGAGTAAAGATGACCCCTTTTATCTTAATCTCTGATCTTGTATAGAATTTAAGCTTTAAAATAAATTCTTCTGTGCAACAGGTGCATTGATGGCTGCAATTTATGCGGATAATAAAGACGAAGATGGTTTTCTTTACATGTCATACAGTGGAGAAAACACTTTTGGTGGGTTCCTTGGAGGACAATGA

mRNA sequence

ATGGCCAGAAGTTCGTTCAAACTCGGAATTCCTTTGGAAAAGAGGCTGGCTGAAGCTGCTCGTATAAGAGAGAAGTATCCGGATAGAATACCTGTGATTGTCGAGAAAGGTGGGAGGTGTGACATTGCTGATATTGATAGGAACAAATACCTCGTCCCCAAGGATTTAACTGTTGGACAGTTTGTTTACGTTGTTCGGAAACGGATTAAGCTTAGTGCTGAGAAAGCTATATTTGTGTTTGTGAAGGACACTCTACCATCAACTGGTGCATTGATGGCTGCAATTTATGCGGATAATAAAGACGAAGATGGTTTTCTTTACATGTCATACAGTGGAGAAAACACTTTTGGTGGGTTCCTTGGAGGACAATGA

Coding sequence (CDS)

ATGGCCAGAAGTTCGTTCAAACTCGGAATTCCTTTGGAAAAGAGGCTGGCTGAAGCTGCTCGTATAAGAGAGAAGTATCCGGATAGAATACCTGTGATTGTCGAGAAAGGTGGGAGGTGTGACATTGCTGATATTGATAGGAACAAATACCTCGTCCCCAAGGATTTAACTGTTGGACAGTTTGTTTACGTTGTTCGGAAACGGATTAAGCTTAGTGCTGAGAAAGCTATATTTGTGTTTGTGAAGGACACTCTACCATCAACTGGTGCATTGATGGCTGCAATTTATGCGGATAATAAAGACGAAGATGGTTTTCTTTACATGTCATACAGTGGAGAAAACACTTTTGGTGGGTTCCTTGGAGGACAATGA

Protein sequence

MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGGFLGGQ*

Homology

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BLAST of Chy2G026690 vs. ExPASy Swiss-Prot
Match: A2YS06 (Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=3 SV=2)

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-48
Identity = 98/120 (81.67%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MARSSFKL  PLE+R AEA RIREKYPDRIPVIVEK  R DI DID+ KYLVP DLTVGQ
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIF+FVK+TLP T ALM+AIY +NKDEDGFLYM+YSGENTFG F+
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLFV 120

[Close]

BLAST of Chy2G026690 vs. ExPASy Swiss-Prot
Match: Q6Z1D5 (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-48
Identity = 98/120 (81.67%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MARSSFKL  PLE+R AEA RIREKYPDRIPVIVEK  R DI DID+ KYLVP DLTVGQ
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIF+FVK+TLP T ALM+AIY +NKDEDGFLYM+YSGENTFG F+
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLFV 120

[Close]

BLAST of Chy2G026690 vs. ExPASy Swiss-Prot
Match: M1C146 (Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-47
Identity = 95/119 (79.83%), Postives = 105/119 (88.24%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MA+SSFKL  PLE+R AEAARIREKYPDRIPVIVEK  R DI DID+ KYLVP DLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGGF 120
           FVYVVRKRIKLSAEKAIF+FVK+ LP T A+M+AIY ++KDEDGFLYM+YSGENTFG F
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFGSF 119

[Close]

BLAST of Chy2G026690 vs. ExPASy Swiss-Prot
Match: Q8LEM4 (Autophagy-related protein 8a OS=Arabidopsis thaliana OX=3702 GN=ATG8A PE=1 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 5.1e-47
Identity = 91/117 (77.78%), Postives = 105/117 (89.74%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MA+SSFK+  PLE R++E++RIREKYPDRIPVIVEK G+ D+ DID+ KYLVP DLTVGQ
Sbjct: 1   MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKL AEKAIFVFVK+TLP T ALM+AIY ++KDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Chy2G026690 vs. ExPASy Swiss-Prot
Match: Q9XEB5 (Autophagy-related protein 8b OS=Arabidopsis thaliana OX=3702 GN=ATG8B PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 9.5e-46
Identity = 88/118 (74.58%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           M ++SFKL  PLE R+AE+ RIR KYP+R+PVIVEK G+ D+ DID+ KYLVP DLT+GQ
Sbjct: 1   MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGG 119
           FVYVVRKRIKL AEKAIFVFVK+TLP T ALM+AIY ++KDEDGFLYM+YSGENTFGG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGG 118

[Close]

BLAST of Chy2G026690 vs. ExPASy TrEMBL
Match: A0A0A0KJW7 (Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_6G513730 PE=3 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.3e-58
Identity = 119/123 (96.75%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MARSS KLGIPLEKRLAEAARIREKYPDRIPVIVEK GR DIADIDRNKYLVPKDLTVGQ
Sbjct: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALM+AIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of Chy2G026690 vs. ExPASy TrEMBL
Match: A0A1S3B043 (Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103484614 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.6e-58
Identity = 118/123 (95.93%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MARSSFKLGIPLEKR AEAARIREKYPDRIPVIVEK GR DIADIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALM+AIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of Chy2G026690 vs. ExPASy TrEMBL
Match: A0A5D3CPT6 (Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006460 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.6e-58
Identity = 118/123 (95.93%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MARSSFKLGIPLEKR AEAARIREKYPDRIPVIVEK GR DIADIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALM+AIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of Chy2G026690 vs. ExPASy TrEMBL
Match: A0A6J1GDU9 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111453258 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.4e-54
Identity = 110/123 (89.43%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MARSSFKLGIPLE+R AEAAR+REKYPDRIPVIVEK GR +I DIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLERRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIFVFVKDTLPSTGALM+ IY  NKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of Chy2G026690 vs. ExPASy TrEMBL
Match: A0A6J1CL79 (Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111012314 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.9e-53
Identity = 111/123 (90.24%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MARSSFKLGIPLE+R AEAARIREKYP+RIPVIVEK GR +IADID+NKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLERRQAEAARIREKYPNRIPVIVEKAGRSNIADIDKNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALM+AIY +NKDEDGFLYMSYSGENTF GFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 122

[Close]

BLAST of Chy2G026690 vs. NCBI nr
Match: XP_004134765.1 (autophagy-related protein 8C [Cucumis sativus] >XP_011658146.1 autophagy-related protein 8C [Cucumis sativus] >XP_011658147.1 autophagy-related protein 8C [Cucumis sativus] >KGN49109.1 hypothetical protein Csa_003738 [Cucumis sativus])

HSP 1 Score: 235 bits (600), Expect = 7.52e-78
Identity = 119/123 (96.75%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MARSS KLGIPLEKRLAEAARIREKYPDRIPVIVEK GR DIADIDRNKYLVPKDLTVGQ
Sbjct: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALM+AIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of Chy2G026690 vs. NCBI nr
Match: XP_008439996.1 (PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_008439997.1 PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_016899344.1 PREDICTED: autophagy-related protein 8C [Cucumis melo] >TYK13044.1 autophagy-related protein 8C [Cucumis melo var. makuwa])

HSP 1 Score: 233 bits (594), Expect = 6.18e-77
Identity = 118/123 (95.93%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MARSSFKLGIPLEKR AEAARIREKYPDRIPVIVEK GR DIADIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALM+AIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of Chy2G026690 vs. NCBI nr
Match: KAG6603779.1 (Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033949.1 Autophagy-related protein 8C [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 222 bits (565), Expect = 1.64e-72
Identity = 111/123 (90.24%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MARSSFKLGIPLEKR AEAAR+REKYPDRIPVIVEK GR +I DIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIFVFVKDTLPSTGALM+ IY  NKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of Chy2G026690 vs. NCBI nr
Match: XP_022950063.1 (autophagy-related protein 8C-like [Cucurbita moschata])

HSP 1 Score: 221 bits (562), Expect = 4.70e-72
Identity = 110/123 (89.43%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MARSSFKLGIPLE+R AEAAR+REKYPDRIPVIVEK GR +I DIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLERRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIFVFVKDTLPSTGALM+ IY  NKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of Chy2G026690 vs. NCBI nr
Match: XP_022142105.1 (autophagy-related protein 8C-like [Momordica charantia] >XP_022142106.1 autophagy-related protein 8C-like [Momordica charantia])

HSP 1 Score: 217 bits (552), Expect = 2.84e-70
Identity = 111/123 (90.24%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MARSSFKLGIPLE+R AEAARIREKYP+RIPVIVEK GR +IADID+NKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLERRQAEAARIREKYPNRIPVIVEKAGRSNIADIDKNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALM+AIY +NKDEDGFLYMSYSGENTFG FL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG-FL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 122

[Close]

BLAST of Chy2G026690 vs. TAIR 10
Match: AT4G21980.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 3.6e-48
Identity = 91/117 (77.78%), Postives = 105/117 (89.74%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MA+SSFK+  PLE R++E++RIREKYPDRIPVIVEK G+ D+ DID+ KYLVP DLTVGQ
Sbjct: 1   MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKL AEKAIFVFVK+TLP T ALM+AIY ++KDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Chy2G026690 vs. TAIR 10
Match: AT4G21980.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 3.6e-48
Identity = 91/117 (77.78%), Postives = 105/117 (89.74%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MA+SSFK+  PLE R++E++RIREKYPDRIPVIVEK G+ D+ DID+ KYLVP DLTVGQ
Sbjct: 16  MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 75

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKL AEKAIFVFVK+TLP T ALM+AIY ++KDEDGFLYM+YSGENTFG
Sbjct: 76  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 132

[Close]

BLAST of Chy2G026690 vs. TAIR 10
Match: AT1G62040.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 184.1 bits (466), Expect = 6.8e-47
Identity = 91/117 (77.78%), Postives = 103/117 (88.03%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MA SSFKL  PLE+R  E++RIREKYPDRIPVIVE+  R D+ +ID+ KYLVP DLTVGQ
Sbjct: 1   MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKLSAEKAIFVFVK+TLP T A+M+AIY +NKDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Chy2G026690 vs. TAIR 10
Match: AT1G62040.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 184.1 bits (466), Expect = 6.8e-47
Identity = 91/117 (77.78%), Postives = 103/117 (88.03%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           MA SSFKL  PLE+R  E++RIREKYPDRIPVIVE+  R D+ +ID+ KYLVP DLTVGQ
Sbjct: 15  MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 74

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKLSAEKAIFVFVK+TLP T A+M+AIY +NKDEDGFLYM+YSGENTFG
Sbjct: 75  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 131

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BLAST of Chy2G026690 vs. TAIR 10
Match: AT4G04620.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 184.1 bits (466), Expect = 6.8e-47
Identity = 88/118 (74.58%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRLAEAARIREKYPDRIPVIVEKGGRCDIADIDRNKYLVPKDLTVGQ 60
           M ++SFKL  PLE R+AE+ RIR KYP+R+PVIVEK G+ D+ DID+ KYLVP DLT+GQ
Sbjct: 1   MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMAAIYADNKDEDGFLYMSYSGENTFGG 119
           FVYVVRKRIKL AEKAIFVFVK+TLP T ALM+AIY ++KDEDGFLYM+YSGENTFGG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGG 118

The following BLAST results are available for this feature:

BLAST of Chy2G026690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2YS06	1.6e-48	81.67	Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=...	[more]
Q6Z1D5	1.6e-48	81.67	Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C P...	[more]
M1C146	1.3e-47	79.83	Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV...	[more]
Q8LEM4	5.1e-47	77.78	Autophagy-related protein 8a OS=Arabidopsis thaliana OX=3702 GN=ATG8A PE=1 SV=2	[more]
Q9XEB5	9.5e-46	74.58	Autophagy-related protein 8b OS=Arabidopsis thaliana OX=3702 GN=ATG8B PE=1 SV=1	[more]

BLAST of Chy2G026690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJW7	1.3e-58	96.75	Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_6G513730 PE=3 SV=1	[more]
A0A1S3B043	6.6e-58	95.93	Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103484614 PE=3 SV=1	[more]
A0A5D3CPT6	6.6e-58	95.93	Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1GDU9	3.4e-54	89.43	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111453258 PE=3 SV=...	[more]
A0A6J1CL79	4.9e-53	90.24	Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111012314 PE=3 SV...	[more]

BLAST of Chy2G026690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134765.1	7.52e-78	96.75	autophagy-related protein 8C [Cucumis sativus] >XP_011658146.1 autophagy-related...	[more]
XP_008439996.1	6.18e-77	95.93	PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_008439997.1 PREDICTED...	[more]
KAG6603779.1	1.64e-72	90.24	Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022950063.1	4.70e-72	89.43	autophagy-related protein 8C-like [Cucurbita moschata]	[more]
XP_022142105.1	2.84e-70	90.24	autophagy-related protein 8C-like [Momordica charantia] >XP_022142106.1 autophag...	[more]

BLAST of Chy2G026690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21980.1	3.6e-48	77.78	Ubiquitin-like superfamily protein	[more]
AT4G21980.2	3.6e-48	77.78	Ubiquitin-like superfamily protein	[more]
AT1G62040.1	6.8e-47	77.78	Ubiquitin-like superfamily protein	[more]
AT1G62040.2	6.8e-47	77.78	Ubiquitin-like superfamily protein	[more]
AT4G04620.1	6.8e-47	74.58	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 14..117 e-value: 5.0E-47 score: 158.4
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..117
None	No IPR available	GENE3D	3.10.20.90		coord: 1..117 e-value: 1.2E-53 score: 182.3
None	No IPR available	PANTHER	PTHR10969:SF77	AUTOPHAGY-RELATED PROTEIN	coord: 1..117
None	No IPR available	CDD	cd16128	Ubl_ATG8	coord: 12..114 e-value: 4.16908E-64 score: 188.053
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 4..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G026690.1	Chy2G026690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule