Chy2G024850 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G024850
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RAB GTPase homolog A1C
Location	chrH02: 1448661 .. 1450943 (+)
RNA-Seq Expression	Chy2G024850
Synteny	Chy2G024850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGCTTACAGAGCTGAAGATGACTATGACTATCTCTTCAAGGTTGTTTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAATCTAAGTCTACTATTGGCGTTGAGTTTGCTACTCGTAGTTTGAATCTTGATGGCAAGGTTATCAAGGCTCAGATTTGGGACACTGCTGGCCAAGAACGGTGTTTTTTCTTCTTCCTTCCGCTTTTCATGTGCTTACTATGGTTCTGATTTCACATTTTGTGATATGGGTCCTTGTCTTTTTAGGTGGAAATATTGTGTCACATATGGGGCTCTGCTATTGTTTTATTGTTTCTCTTTCTTTTTCTTATACTGATTTTCAAATGTACATGCTCCTAATAAAATTGCTTTTTAAGCTTCGATTAGTCTTAATTATGGTCTTTGTTTGGTTTAGATTATGCTTGTTCATTTGTTTCGATAGGTTAGTTATTGATTGCAATGGGGTACCTGACGGGTTTGGTGGATCTAAGCTAAAAGACTTTTGTTAGAGCTTAGAATACTATATATAACCGGAAGTTGCCTTCCCTTGTCATTTTCCCGCACATCAAATCCTCAATTCAATATATTAGGTCGATTGTCCTCTCTAGTGTTTCCACGTGAGGGAGGGGTATTTTTGTGTTTTATGTAGTATCAATGTCATGAATATGAGTTAAAAAATGTGGAAACTTTGTTAATTTTGAAAATTGAAATTTACCGTATAGAGGTTGAGAGATATTTTAGGAGAAAATTGAGTTATGTTTGTTTAATTTGCATCAGCACTTGTTACCTAGATCACAGAAATCATCCTATCGCTATCGTGCTAGATGCTACCTTGTCCTACAAAACAGCAAAGAGAAAGGAACAAGTGAGATAGCAAGTCAAGCCTTTCAATCAGATTTCAATATGGAAACCTTTTTGGATAACTCCGAATGTAGTTTCGTTTGGTTATCATGCATATGCTAGAAACATGTCTTTAGGCTTAAAGCAGAAGGTCCCTTCCCTTAATTTGTAATTCAGGCATTACGTGGTTGCCAGTATGGATTGGACAGGCAGATGCCCCCAAAGATCTTGAGTATGTTAGATGATTGATCGGCTGCAACGTGCATTCTCAAAAAACTTACTGTTTTTTAACTTTTCTCTTCCAAATAATTGTCTTTCTATTTTTAACAACCGTGTTAGGTTATTCCACCTCTATTATGGAAGTGGTTGGGTGTTGATTTTTAATGTGGAGAAAAGTTCACCTCTTCAATTAGTGTTTGGGGTTCAAAGAGCAGGGGAATATCAATTAGTAGTATATCATTTGTTAAACTGGTATTAAGAGGCCTGTGGGCTGTGTCAAAGTTCGATGCATATCGTCTACTGATGTAGAGATGGTTGCAGGGAGTCTTAAGTCATAGAACATATGAGATTGTTTTGCCTCTTTTACTAGTTTATGGGTTTGACCGAACAGAACCCATTTTTTCTTTAGCAATAAGATTGATCTTTAATATCTTGTTTATCGGGAAAAAGTTGTCCCATTCTCATTTTAACAAGTGAGGGATGGCTGTTAGATAGTTGTGTTGTCCCATTAAGTACCCCAATGCGAGCAAATTAGGATGCGATTGGAAAAGTTTTCTGTAGTGCTTGTATATATGGCACCGGCACTGGCACTGGCACGTATGATTATTGGAGAGAACAAACTTTTTCTGTACTGAAGATGGGATATTTACCTGTGTGACACACTTTTAACTTAGTTTGGTCTTAAAATCTCTCTCTACTTGCCTTACTTTTCCACATCTCTTCTTTATCATCTTTTCTTAAATTCACAGGTATAGGGCAATTACAAGTGCTTACTATAGAGGAGCAGTTGGTGCCCTGCTTGTGTACGATGTCACACGACACTCCACATATGAAAATGTTGAGAAGTGGTTGAAGGAGTTGAGAGATCACACCGATCCCAACATTGTAGTAATGCTAGTTGGCAACAAATCAGATCTTCGCCACCTTGTGGCAGTGTCAACAGAGGATGCAAAATCATTTGCCGAGACAGAGTCTCTGTATTTCATGGAAACCTCTGCCCTTGAAGCCACAAACGTCGACAACGCCTTTGCTGAAGTGCTTACACAAATTTACCACATAGTGAGCAAGAAGGCTATGGAAACTAATGATGATGCTGCTGCATCAGCCGTTATAGCGAAAGGGGAGAAAATTGATATCAGTAAGGACGTGTCTGAGGTAAAGAAAGGCGGTTGCTGTTCCAGCTAG

mRNA sequence

ATGTCTGCTTACAGAGCTGAAGATGACTATGACTATCTCTTCAAGGTTGTTTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAATCTAAGTCTACTATTGGCGTTGAGTTTGCTACTCGTAGTTTGAATCTTGATGGCAAGCACTTGTTACCTAGATCACAGAAATCATCCTATCGCTATCGTGCTAGATGCTACCTTGTCCTACAAAACAGCAAAGAGAAAGGAACAAGCATTACGTGGTTGCCAGTATGGATTGGACAGGCAGATGCCCCCAAAGATCTTGAGTATAGGGCAATTACAAGTGCTTACTATAGAGGAGCAGTTGGTGCCCTGCTTGTGTACGATGTCACACGACACTCCACATATGAAAATGTTGAGAAGTGGTTGAAGGAGTTGAGAGATCACACCGATCCCAACATTGTAGTAATGCTAGTTGGCAACAAATCAGATCTTCGCCACCTTGTGGCAGTGTCAACAGAGGATGCAAAATCATTTGCCGAGACAGAGTCTCTGTATTTCATGGAAACCTCTGCCCTTGAAGCCACAAACGTCGACAACGCCTTTGCTGAAGTGCTTACACAAATTTACCACATAGTGAGCAAGAAGGCTATGGAAACTAATGATGATGCTGCTGCATCAGCCGTTATAGCGAAAGGGGAGAAAATTGATATCAGTAAGGACGTGTCTGAGGTAAAGAAAGGCGGTTGCTGTTCCAGCTAG

Coding sequence (CDS)

ATGTCTGCTTACAGAGCTGAAGATGACTATGACTATCTCTTCAAGGTTGTTTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAATCTAAGTCTACTATTGGCGTTGAGTTTGCTACTCGTAGTTTGAATCTTGATGGCAAGCACTTGTTACCTAGATCACAGAAATCATCCTATCGCTATCGTGCTAGATGCTACCTTGTCCTACAAAACAGCAAAGAGAAAGGAACAAGCATTACGTGGTTGCCAGTATGGATTGGACAGGCAGATGCCCCCAAAGATCTTGAGTATAGGGCAATTACAAGTGCTTACTATAGAGGAGCAGTTGGTGCCCTGCTTGTGTACGATGTCACACGACACTCCACATATGAAAATGTTGAGAAGTGGTTGAAGGAGTTGAGAGATCACACCGATCCCAACATTGTAGTAATGCTAGTTGGCAACAAATCAGATCTTCGCCACCTTGTGGCAGTGTCAACAGAGGATGCAAAATCATTTGCCGAGACAGAGTCTCTGTATTTCATGGAAACCTCTGCCCTTGAAGCCACAAACGTCGACAACGCCTTTGCTGAAGTGCTTACACAAATTTACCACATAGTGAGCAAGAAGGCTATGGAAACTAATGATGATGCTGCTGCATCAGCCGTTATAGCGAAAGGGGAGAAAATTGATATCAGTAAGGACGTGTCTGAGGTAAAGAAAGGCGGTTGCTGTTCCAGCTAG

Protein sequence

MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKHLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS*

Homology

[Close]

BLAST of Chy2G024850 vs. ExPASy Swiss-Prot
Match: Q9FK68 (Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.9e-88
Identity = 179/252 (71.03%), Postives = 194/252 (76.98%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLN+D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
                                         +    +W    D      YRAITSAYYRGA
Sbjct: 61  ------------------------------VIKAQIW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRHST+ENVE WLKELR+HTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAE
Sbjct: 121 VGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
            ESLYFMETSALEATNV+NAFAEVLTQI+HIVSKKAME   ++A   V +KG+KIDI KD
Sbjct: 181 KESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESA--NVPSKGDKIDIGKD 216

Query: 241 VSEVKKGGCCSS 253
           VS VKKGGCCS+
Sbjct: 241 VSAVKKGGCCSN 216

[Close]

BLAST of Chy2G024850 vs. ExPASy Swiss-Prot
Match: P40393 (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 SV=2)

HSP 1 Score: 319.3 bits (817), Expect = 3.9e-86
Identity = 172/250 (68.80%), Postives = 189/250 (75.60%), Query Frame = 0


Query: 2   SAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKH 61
           + YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSL +DGK 
Sbjct: 3   AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGK- 62

Query: 62  LLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGAV 121
                                        +    +W    D      YRAITSAYYRGAV
Sbjct: 63  -----------------------------VVKAQIW----DTAGQERYRAITSAYYRGAV 122

Query: 122 GALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAET 181
           GALLVYDVTRHST+ENVE+WLKELRDHTDPNIVVMLVGNKSDLRHLVAV T++ K+FAE 
Sbjct: 123 GALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAER 182

Query: 182 ESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKDV 241
           ESLYFMETSALE+TNV+NAFAEVLTQIY IVSK+++E  DDA +     KGEKI+I  DV
Sbjct: 183 ESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGSGP--GKGEKINIKDDV 216

Query: 242 SEVKKGGCCS 252
           S VKKGGCCS
Sbjct: 243 SAVKKGGCCS 216

[Close]

BLAST of Chy2G024850 vs. ExPASy Swiss-Prot
Match: Q9SN35 (Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.1e-86
Identity = 174/252 (69.05%), Postives = 193/252 (76.59%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
                                         +    +W    D      YRAITSAYYRGA
Sbjct: 61  ------------------------------VIKAQIW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRHST+ENVE+WL+ELRDHTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAE
Sbjct: 121 VGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
            ESLYFMETSALE+TNV+NAF+EVLTQIYH+VSKKAME  +D  +  V +KGEKID+  D
Sbjct: 181 NESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGED--SGNVPSKGEKIDV--D 214

Query: 241 VSEVKKGGCCSS 253
           VS VKK GCCS+
Sbjct: 241 VSAVKKTGCCSN 214

[Close]

BLAST of Chy2G024850 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 7.6e-82
Identity = 164/252 (65.08%), Postives = 183/252 (72.62%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFAT+SLN+D K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
                                         +    +W    D      YRAITSAYYRGA
Sbjct: 61  ------------------------------VIKAQIW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRH TYENV +WLKELRDHTDPNIVVML+GNKSDLRHLVAVST++AK  AE
Sbjct: 121 VGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
            E LYFMETSALEATNV+NAF E LTQIY IVSKKA+E  D+ A S+   KGE I+I  +
Sbjct: 181 REGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSSAPPKGETINIKDE 218

Query: 241 VSEVKKGGCCSS 253
            S  KK GCCSS
Sbjct: 241 GSSWKKFGCCSS 218

[Close]

BLAST of Chy2G024850 vs. ExPASy Swiss-Prot
Match: Q39222 (Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 6.4e-81
Identity = 163/252 (64.68%), Postives = 186/252 (73.81%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L +DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
                                         +    +W    D      YRAITSAYYRGA
Sbjct: 61  ------------------------------VVKAQIW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTR +T+ENV++WLKEL++HTDPNIVVMLVGNKSDLRHL+AV TED KS+AE
Sbjct: 121 VGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
            ESL FMETSALEATNV++AFAEVLTQIY I SKK +E  +D  AS  + KGEKI++  D
Sbjct: 181 QESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNAS--VPKGEKIEVKND 216

Query: 241 VSEVKKGGCCSS 253
           VS +KK GCCS+
Sbjct: 241 VSALKKLGCCSN 216

[Close]

BLAST of Chy2G024850 vs. ExPASy TrEMBL
Match: A0A5D3CP64 (Ras-related protein RABA1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008350 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.2e-101
Identity = 206/252 (81.75%), Postives = 208/252 (82.54%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
                                         +    +W    D      YRAITSAYYRGA
Sbjct: 61  ------------------------------VIKAQIW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE
Sbjct: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
           TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD
Sbjct: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 218

Query: 241 VSEVKKGGCCSS 253
           VSEVKKGGCCSS
Sbjct: 241 VSEVKKGGCCSS 218

[Close]

BLAST of Chy2G024850 vs. ExPASy TrEMBL
Match: E5GC30 (GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.2e-101
Identity = 206/252 (81.75%), Postives = 208/252 (82.54%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
                                         +    +W    D      YRAITSAYYRGA
Sbjct: 61  ------------------------------VIKAQIW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE
Sbjct: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
           TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD
Sbjct: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 218

Query: 241 VSEVKKGGCCSS 253
           VSEVKKGGCCSS
Sbjct: 241 VSEVKKGGCCSS 218

[Close]

BLAST of Chy2G024850 vs. ExPASy TrEMBL
Match: A0A0A0KNM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519720 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.2e-101
Identity = 206/252 (81.75%), Postives = 208/252 (82.54%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
                                         +    +W    D      YRAITSAYYRGA
Sbjct: 61  ------------------------------VIKAQIW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE
Sbjct: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
           TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD
Sbjct: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 218

Query: 241 VSEVKKGGCCSS 253
           VSEVKKGGCCSS
Sbjct: 241 VSEVKKGGCCSS 218

[Close]

BLAST of Chy2G024850 vs. ExPASy TrEMBL
Match: A0A1S3B019 (ras-related protein RABA1c-like OS=Cucumis melo OX=3656 GN=LOC103484436 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.2e-101
Identity = 206/252 (81.75%), Postives = 208/252 (82.54%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
                                         +    +W    D      YRAITSAYYRGA
Sbjct: 61  ------------------------------VIKAQIW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE
Sbjct: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
           TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD
Sbjct: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 218

Query: 241 VSEVKKGGCCSS 253
           VSEVKKGGCCSS
Sbjct: 241 VSEVKKGGCCSS 218

[Close]

BLAST of Chy2G024850 vs. ExPASy TrEMBL
Match: A0A6J1IU78 (ras-related protein RABA1c-like OS=Cucurbita maxima OX=3661 GN=LOC111478625 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 7.1e-99
Identity = 199/252 (78.97%), Postives = 206/252 (81.75%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
                                         +    +W    D      YRAITSAYYRGA
Sbjct: 61  ------------------------------VIKAQIW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV+MLVGNKSDLRHLVAVSTEDAKSFAE
Sbjct: 121 VGALIVYDVTRHSTYENVEKWLKELRDHTDPNIVIMLVGNKSDLRHLVAVSTEDAKSFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
           TESLYFMETSALEA NVDNAFAEVLTQIYHIVSKKAM+ +DDAAASAV+AKGEKIDISKD
Sbjct: 181 TESLYFMETSALEAMNVDNAFAEVLTQIYHIVSKKAMDASDDAAASAVLAKGEKIDISKD 218

Query: 241 VSEVKKGGCCSS 253
           VSEVKKGGCCSS
Sbjct: 241 VSEVKKGGCCSS 218

[Close]

BLAST of Chy2G024850 vs. NCBI nr
Match: XP_004134652.1 (ras-related protein RABA1c [Cucumis sativus] >XP_008439722.1 PREDICTED: ras-related protein RABA1c-like [Cucumis melo] >ADN34029.1 GTP-binding protein [Cucumis melo subsp. melo] >KAA0052607.1 ras-related protein RABA1c [Cucumis melo var. makuwa] >KGN49321.1 hypothetical protein Csa_002721 [Cucumis sativus] >TYK13220.1 ras-related protein RABA1c [Cucumis melo var. makuwa])

HSP 1 Score: 383 bits (984), Expect = 1.05e-132
Identity = 206/252 (81.75%), Postives = 209/252 (82.94%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
            +  +                              +W    D      YRAITSAYYRGA
Sbjct: 61  VIKAQ------------------------------IW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE
Sbjct: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
           TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD
Sbjct: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 218

Query: 241 VSEVKKGGCCSS 252
           VSEVKKGGCCSS
Sbjct: 241 VSEVKKGGCCSS 218

[Close]

BLAST of Chy2G024850 vs. NCBI nr
Match: XP_038892728.1 (ras-related protein RABA1c-like [Benincasa hispida])

HSP 1 Score: 380 bits (977), Expect = 1.22e-131
Identity = 204/252 (80.95%), Postives = 208/252 (82.54%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
            +  +                              +W    D      YRAITSAYYRGA
Sbjct: 61  VIKAQ------------------------------IW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE
Sbjct: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
           TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAME NDDAAASAV+AKGEKIDISKD
Sbjct: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMEANDDAAASAVLAKGEKIDISKD 218

Query: 241 VSEVKKGGCCSS 252
           VSEVKKGGCCSS
Sbjct: 241 VSEVKKGGCCSS 218

[Close]

BLAST of Chy2G024850 vs. NCBI nr
Match: XP_022926120.1 (ras-related protein RABA1c-like [Cucurbita moschata] >XP_022978763.1 ras-related protein RABA1c-like [Cucurbita maxima] >XP_023544519.1 ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG6581369.1 Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 374 bits (960), Expect = 4.74e-129
Identity = 199/252 (78.97%), Postives = 207/252 (82.14%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
            +  +                              +W    D      YRAITSAYYRGA
Sbjct: 61  VIKAQ------------------------------IW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV+MLVGNKSDLRHLVAVSTEDAKSFAE
Sbjct: 121 VGALIVYDVTRHSTYENVEKWLKELRDHTDPNIVIMLVGNKSDLRHLVAVSTEDAKSFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
           TESLYFMETSALEA NVDNAFAEVLTQIYHIVSKKAM+ +DDAAASAV+AKGEKIDISKD
Sbjct: 181 TESLYFMETSALEAMNVDNAFAEVLTQIYHIVSKKAMDASDDAAASAVLAKGEKIDISKD 218

Query: 241 VSEVKKGGCCSS 252
           VSEVKKGGCCSS
Sbjct: 241 VSEVKKGGCCSS 218

[Close]

BLAST of Chy2G024850 vs. NCBI nr
Match: XP_022142300.1 (ras-related protein RABA1c [Momordica charantia])

HSP 1 Score: 373 bits (958), Expect = 9.57e-129
Identity = 200/252 (79.37%), Postives = 206/252 (81.75%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLD K
Sbjct: 1   MAAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDSK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
            +  +                              +W    D      YRAITSAYYRGA
Sbjct: 61  VIKAQ------------------------------IW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE
Sbjct: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
           TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAME +DDAAASAV+AKGEKIDISKD
Sbjct: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMEASDDAAASAVVAKGEKIDISKD 218

Query: 241 VSEVKKGGCCSS 252
           VS VKKGGCCSS
Sbjct: 241 VSAVKKGGCCSS 218

[Close]

BLAST of Chy2G024850 vs. NCBI nr
Match: XP_023518462.1 (ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG7026514.1 Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358 bits (920), Expect = 5.86e-123
Identity = 188/252 (74.60%), Postives = 204/252 (80.95%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLE+KSTIGVEFATRSL++DG+
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
            +  +                              +W    D      YRAITSAYYRGA
Sbjct: 61  VIKAQ------------------------------IW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRH+TYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAE
Sbjct: 121 VGALLVYDVTRHATYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVPTEDAKSFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
           TES+YFMETSALE+TNVDNAF EVL QIYH+VSKKAME ++DAAAS V+AKGE+IDISKD
Sbjct: 181 TESVYFMETSALESTNVDNAFVEVLKQIYHLVSKKAMEASNDAAASVVLAKGERIDISKD 218

Query: 241 VSEVKKGGCCSS 252
           VSE+KKGGCCSS
Sbjct: 241 VSEIKKGGCCSS 218

[Close]

BLAST of Chy2G024850 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 327.0 bits (837), Expect = 1.3e-89
Identity = 179/252 (71.03%), Postives = 194/252 (76.98%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLN+D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
                                         +    +W    D      YRAITSAYYRGA
Sbjct: 61  ------------------------------VIKAQIW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRHST+ENVE WLKELR+HTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAE
Sbjct: 121 VGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
            ESLYFMETSALEATNV+NAFAEVLTQI+HIVSKKAME   ++A   V +KG+KIDI KD
Sbjct: 181 KESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESA--NVPSKGDKIDIGKD 216

Query: 241 VSEVKKGGCCSS 253
           VS VKKGGCCS+
Sbjct: 241 VSAVKKGGCCSN 216

[Close]

BLAST of Chy2G024850 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 318.9 bits (816), Expect = 3.6e-87
Identity = 174/252 (69.05%), Postives = 193/252 (76.59%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
                                         +    +W    D      YRAITSAYYRGA
Sbjct: 61  ------------------------------VIKAQIW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRHST+ENVE+WL+ELRDHTDPNIVVMLVGNKSDLRHLVAV TEDAKSFAE
Sbjct: 121 VGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
            ESLYFMETSALE+TNV+NAF+EVLTQIYH+VSKKAME  +D  +  V +KGEKID+  D
Sbjct: 181 NESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGED--SGNVPSKGEKIDV--D 214

Query: 241 VSEVKKGGCCSS 253
           VS VKK GCCS+
Sbjct: 241 VSAVKKTGCCSN 214

[Close]

BLAST of Chy2G024850 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 302.0 bits (772), Expect = 4.6e-82
Identity = 163/252 (64.68%), Postives = 186/252 (73.81%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L +DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
                                         +    +W    D      YRAITSAYYRGA
Sbjct: 61  ------------------------------VVKAQIW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTR +T+ENV++WLKEL++HTDPNIVVMLVGNKSDLRHL+AV TED KS+AE
Sbjct: 121 VGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKD 240
            ESL FMETSALEATNV++AFAEVLTQIY I SKK +E  +D  AS  + KGEKI++  D
Sbjct: 181 QESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNAS--VPKGEKIEVKND 216

Query: 241 VSEVKKGGCCSS 253
           VS +KK GCCS+
Sbjct: 241 VSALKKLGCCSN 216

[Close]

BLAST of Chy2G024850 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 291.6 bits (745), Expect = 6.2e-79
Identity = 159/254 (62.60%), Postives = 185/254 (72.83%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+AYRA+DDYD+L+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+++D K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
                                         I    +W    D      YRAITSAYYRGA
Sbjct: 61  ------------------------------IVKAQIW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRH T+ENVE+WLKELRDHT+ NIV+MLVGNK+DLRHL AVSTEDAK+FAE
Sbjct: 121 VGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHLRAVSTEDAKAFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISK- 240
            E+ +FMETSALEA NV+NAF EVL+QIY + SKKA++  DD      + KG+ I++   
Sbjct: 181 RENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGDD---HTTLPKGQSINVGSK 217

Query: 241 -DVSEVKKGGCCSS 253
            DVSEVKK GCCSS
Sbjct: 241 DDVSEVKKVGCCSS 217

[Close]

BLAST of Chy2G024850 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 291.6 bits (745), Expect = 6.2e-79
Identity = 159/254 (62.60%), Postives = 186/254 (73.23%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+AYRA+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+++D K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  HLLPRSQKSSYRYRARCYLVLQNSKEKGTSITWLPVWIGQADAPKDLEYRAITSAYYRGA 120
                                         I    +W    D      YRAITSAYYRGA
Sbjct: 61  ------------------------------IVKAQIW----DTAGQERYRAITSAYYRGA 120

Query: 121 VGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAE 180
           VGALLVYDVTRH T+ENVE+WLKELRDHTD NIV+M VGNK+DLRHL AVSTEDAK+FAE
Sbjct: 121 VGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVSTEDAKAFAE 180

Query: 181 TESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISK- 240
            E+ +FMETSALE+ NV+NAF EVL+QIY +VS+KA++  DD AA   + KG+ I++   
Sbjct: 181 RENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAA---LPKGQTINVGSK 217

Query: 241 -DVSEVKKGGCCSS 253
            DVS VKK GCCS+
Sbjct: 241 DDVSAVKKVGCCSN 217

The following BLAST results are available for this feature:

BLAST of Chy2G024850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK68	1.9e-88	71.03	Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1	[more]
P40393	3.9e-86	68.80	Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 S...	[more]
Q9SN35	5.1e-86	69.05	Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1	[more]
Q01111	7.6e-82	65.08	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]
Q39222	6.4e-81	64.68	Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1	[more]

BLAST of Chy2G024850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CP64	1.2e-101	81.75	Ras-related protein RABA1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
E5GC30	1.2e-101	81.75	GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0KNM1	1.2e-101	81.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519720 PE=4 SV=1	[more]
A0A1S3B019	1.2e-101	81.75	ras-related protein RABA1c-like OS=Cucumis melo OX=3656 GN=LOC103484436 PE=4 SV=...	[more]
A0A6J1IU78	7.1e-99	78.97	ras-related protein RABA1c-like OS=Cucurbita maxima OX=3661 GN=LOC111478625 PE=4...	[more]

BLAST of Chy2G024850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134652.1	1.05e-132	81.75	ras-related protein RABA1c [Cucumis sativus] >XP_008439722.1 PREDICTED: ras-rela...	[more]
XP_038892728.1	1.22e-131	80.95	ras-related protein RABA1c-like [Benincasa hispida]	[more]
XP_022926120.1	4.74e-129	78.97	ras-related protein RABA1c-like [Cucurbita moschata] >XP_022978763.1 ras-related...	[more]
XP_022142300.1	9.57e-129	79.37	ras-related protein RABA1c [Momordica charantia]	[more]
XP_023518462.1	5.86e-123	74.60	ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG7026514.1 Ras-r...	[more]

BLAST of Chy2G024850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45750.1	1.3e-89	71.03	RAB GTPase homolog A1C	[more]
AT4G18800.1	3.6e-87	69.05	RAB GTPase homolog A1D	[more]
AT1G16920.1	4.6e-82	64.68	RAB GTPase homolog A1B	[more]
AT3G15060.1	6.2e-79	62.60	RAB GTPase homolog A1G	[more]
AT5G60860.1	6.2e-79	62.60	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 186..208 score: 40.43 coord: 37..53 score: 36.77 coord: 151..164 score: 54.65 coord: 14..35 score: 55.22
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..211 e-value: 2.7E-76 score: 269.5
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..211 e-value: 1.9E-9 score: 19.7
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..62
None	No IPR available	PANTHER	PTHR47979:SF27	RAS-RELATED PROTEIN RIC2	coord: 107..252
None	No IPR available	PANTHER	PTHR47979:SF27	RAS-RELATED PROTEIN RIC2	coord: 1..62
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 107..252
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..250 score: 30.279486
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..223 score: 9.026627
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..209 e-value: 1.3717E-105 score: 301.016
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..207 e-value: 4.3E-8 score: -14.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..61 e-value: 7.9E-13 score: 48.3 coord: 108..209 e-value: 4.0E-31 score: 107.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..252 score: 14.407738
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..204 e-value: 8.0E-29 score: 98.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..250 e-value: 1.3E-58 score: 199.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G024850.1	Chy2G024850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding