Chy2G024260 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G024260
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH02: 1141498 .. 1142054 (-)
RNA-Seq Expression	Chy2G024260
Synteny	Chy2G024260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAATAAACAACCGTATTCAAACCGAGTCGATACCGAGTTTAAGAGAGAGAGAATCAGAAAGAGAGATTTTGGAGAGAGAACGGATGGATGATGCAATTGACAGGAAGAAAACGAAGACGATGAAGACGAGAGTGTTCAGCTTCCAGAGGCTCAGAGATTCTTGGAAGTGGAAATTTCTTAAAAATTTCAAGTGGAAGCGATTGAATCTCCAGATCGGTTTCTTTGATGCTATAATTTTCCGAATCGTTTCTCTGTTTGAGGCCATTGCGTTGGTAGGCATCGCCGGTTTCTTTTTCCTCTGTTGTGGCGGTTGCCGCTTTTGATTATTCGATATGAAACTAACCGAAGTCTGTATGTATTTGTTAATTTGTTATAAAAATTTCCTTCCTCTTCAGTTTTTTTTCTTCGAGTCATTGTCAATTATATTAATTCTCCTTTTGAATTGTGTTGATCTCTATGGCTTTGATATCTGTGACGACTGACGAAGTACTCGTTAATTAATCGAGCAAAACTCTTCAGTTTTCGAATTGAATTCATTGATTATAACATTGCATT

mRNA sequence

ATAAATAAACAACCGTATTCAAACCGAGTCGATACCGAGTTTAAGAGAGAGAGAATCAGAAAGAGAGATTTTGGAGAGAGAACGGATGGATGATGCAATTGACAGGAAGAAAACGAAGACGATGAAGACGAGAGTGTTCAGCTTCCAGAGGCTCAGAGATTCTTGGAAGTGGAAATTTCTTAAAAATTTCAAGTGGAAGCGATTGAATCTCCAGATCGGTTTCTTTGATGCTATAATTTTCCGAATCGTTTCTCTGTTTGAGGCCATTGCGTTGGTAGGCATCGCCGGTTTCTTTTTCCTCTGTTGTGGCGGTTGCCGCTTTTGATTATTCGATATGAAACTAACCGAAGTCTGTATGTATTTGTTAATTTGTTATAAAAATTTCCTTCCTCTTCAGTTTTTTTTCTTCGAGTCATTGTCAATTATATTAATTCTCCTTTTGAATTGTGTTGATCTCTATGGCTTTGATATCTGTGACGACTGACGAAGTACTCGTTAATTAATCGAGCAAAACTCTTCAGTTTTCGAATTGAATTCATTGATTATAACATTGCATT

Coding sequence (CDS)

ATAAATAAACAACCGTATTCAAACCGAGTCGATACCGAGTTTAAGAGAGAGAGAATCAGAAAGAGAGATTTTGGAGAGAGAACGGATGGATGATGCAATTGACAGGAAGAAAACGAAGACGATGAAGACGAGAGTGTTCAGCTTCCAGAGGCTCAGAGATTCTTGGAAGTGGAAATTTCTTAAAAATTTCAAGTGGAAGCGATTGAATCTCCAGATCGGTTTCTTTGATGCTATAATTTTCCGAATCGTTTCTCTGTTTGAGGCCATTGCGTTGGTAGGCATCGCCGGTTTCTTTTTCCTCTGTTGTGGCGGTTGCCGCTTTTGATTATTCGATATGAAACTAACCGAAGTCTGTATGTATTTGTTAATTTGTTATAAAAATTTCCTTCCTCTTCAGTTTTTTTTCTTCGAGTCATTGTCAATTATATTAATTCTCCTTTTGAATTGTGTTGATCTCTATGGCTTTGATATCTGTGACGACTGACGAAGTACTCGTTAATTAATCGAGCAAAACTCTTCAGTTTTCGAATTGAATTCATTGATTATAACATTGCATT

Protein sequence

INKQPYSNRVDTEFKRERIRKRDFGERTDG*CN*QEENEDDEDESVQLPEAQRFLEVEIS*KFQVEAIESPDRFL*CYNFPNRFSV*GHCVGRHRRFLFPLLWRLPLLIIRYETNRSLYVFVNLL*KFPSSSVFFLRVIVNYINSPFELC*SLWL*YL*RLTKYSLINRAKLFSFRIEFIDYNIAX

Homology

The following BLAST results are available for this feature:

BLAST of Chy2G024260 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G024260 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G024260 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G024260 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G024260.1	Chy2G024260.1	mRNA