Chy1G022340 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAACTCCAACCGCCAGTGCCACTCGTGTTCTTCTACAGCAAAGTAAGGATTTGGATTTCTTAAAGACTTTTTTTTTTGTTTTTTAAAATTAAATATAGACAGTTTGTACGTTTGAATTTGATTAACAAACAACAGTAGCTATTTTCTTTAATGGAAAAAACTTGGTTTTTAATATTTAAAGCTAATTATGAGTTGGGGTGGTGTGTGTATGTGTGTGCAGTTAATAGGCCGCCAATATGCCCGGCGTGCGTGTGCTGCGAACCGGCACCGGCGGGATCCTGTTGCCGCTGTTGTGCTTCTCCGATTCAGACGTCATCTCAGAACGGGTCGCCATGA ATGACAACTCCAACCGCCAGTGCCACTCGTGTTCTTCTACAGCAAATTAATAGGCCGCCAATATGCCCGGCGTGCGTGTGCTGCGAACCGGCACCGGCGGGATCCTGTTGCCGCTGTTGTGCTTCTCCGATTCAGACGTCATCTCAGAACGGGTCGCCATGA ATGACAACTCCAACCGCCAGTGCCACTCGTGTTCTTCTACAGCAAATTAATAGGCCGCCAATATGCCCGGCGTGCGTGTGCTGCGAACCGGCACCGGCGGGATCCTGTTGCCGCTGTTGTGCTTCTCCGATTCAGACGTCATCTCAGAACGGGTCGCCATGA MTTPTASATRVLLQQINRPPICPACVCCEPAPAGSCCRCCASPIQTSSQNGSP* Homology
BLAST of Chy1G022340 vs. ExPASy TrEMBL
Match: A0A0A0K7Y9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452230 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 3.7e-21 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Chy1G022340 vs. ExPASy TrEMBL
Match: A0A5A7UWJ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00530 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.8e-20 Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Chy1G022340 vs. ExPASy TrEMBL
Match: A0A6J1JPW7 (uncharacterized protein LOC111488758 OS=Cucurbita maxima OX=3661 GN=LOC111488758 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 7.7e-19 Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 0
BLAST of Chy1G022340 vs. ExPASy TrEMBL
Match: A0A6J1GR88 (uncharacterized protein LOC111456398 OS=Cucurbita moschata OX=3662 GN=LOC111456398 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.1e-17 Identity = 45/52 (86.54%), Postives = 49/52 (94.23%), Query Frame = 0
BLAST of Chy1G022340 vs. ExPASy TrEMBL
Match: A0A6J1CSH3 (uncharacterized protein LOC111013890 OS=Momordica charantia OX=3673 GN=LOC111013890 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.5e-11 Identity = 37/50 (74.00%), Postives = 44/50 (88.00%), Query Frame = 0
BLAST of Chy1G022340 vs. NCBI nr
Match: KGN45568.1 (hypothetical protein Csa_016454 [Cucumis sativus]) HSP 1 Score: 108 bits (270), Expect = 2.16e-29 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Chy1G022340 vs. NCBI nr
Match: XP_038896231.1 (uncharacterized protein LOC120084509 [Benincasa hispida]) HSP 1 Score: 107 bits (266), Expect = 8.81e-29 Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Chy1G022340 vs. NCBI nr
Match: KAA0059464.1 (hypothetical protein E6C27_scaffold242G001940 [Cucumis melo var. makuwa] >TYK03859.1 hypothetical protein E5676_scaffold347G00530 [Cucumis melo var. makuwa]) HSP 1 Score: 106 bits (264), Expect = 1.78e-28 Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Chy1G022340 vs. NCBI nr
Match: XP_022992462.1 (uncharacterized protein LOC111488758 [Cucurbita maxima]) HSP 1 Score: 100 bits (250), Expect = 2.50e-26 Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 0
BLAST of Chy1G022340 vs. NCBI nr
Match: KAG6575497.1 (hypothetical protein SDJN03_26136, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 98.6 bits (244), Expect = 2.06e-25 Identity = 45/49 (91.84%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of Chy1G022340 vs. TAIR 10
Match: AT1G51920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 7.6e-11 Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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