Chy1G022320 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTTAACAAACATCGGTGGCTTGTCTGTCAGGTACTATACATCAAACAGGTTAACTGAAAAAAGCGATGTGTATGGTTTTGGAGTTTCCTTAATGGAAGTAATTAGTTGCAGACCAGTAATTTCCAACATCGAAGACCCAGAAATGAATTACATAGCCAAATGGATGCGGACCATGGTTGCTCAGAGAAATATCAAGAATATAGTTGACCCAAGATTAAAAGAAGCATATGAAAGTAACTCTGTTTGGAAGGCTGTGAGACTAGCCTTGGCTTGCGTATCAGAAAACTCCAGTGAAAGGCCAACGATGAATCAAGTAGTGATAGAGCTGAAGGAATGCTTGGCCATGGAGTTGAATCAGAGATTAGAACAGCGTCCACTAGAATCAAGAATTCACTGA ATGAAGTTAACAAACATCGGTGGCTTGTCTGTCAGGTACTATACATCAAACAGGTTAACTGAAAAAAGCGATGTGTATGGTTTTGGAGTTTCCTTAATGGAAGTAATTAGTTGCAGACCAGTAATTTCCAACATCGAAGACCCAGAAATGAATTACATAGCCAAATGGATGCGGACCATGGTTGCTCAGAGAAATATCAAGAATATAGTTGACCCAAGATTAAAAGAAGCATATGAAAGTAACTCTGTTTGGAAGGCTGTGAGACTAGCCTTGGCTTGCGTATCAGAAAACTCCAGTGAAAGGCCAACGATGAATCAAGTAGTGATAGAGCTGAAGGAATGCTTGGCCATGGAGTTGAATCAGAGATTAGAACAGCGTCCACTAGAATCAAGAATTCACTGA ATGAAGTTAACAAACATCGGTGGCTTGTCTGTCAGGTACTATACATCAAACAGGTTAACTGAAAAAAGCGATGTGTATGGTTTTGGAGTTTCCTTAATGGAAGTAATTAGTTGCAGACCAGTAATTTCCAACATCGAAGACCCAGAAATGAATTACATAGCCAAATGGATGCGGACCATGGTTGCTCAGAGAAATATCAAGAATATAGTTGACCCAAGATTAAAAGAAGCATATGAAAGTAACTCTGTTTGGAAGGCTGTGAGACTAGCCTTGGCTTGCGTATCAGAAAACTCCAGTGAAAGGCCAACGATGAATCAAGTAGTGATAGAGCTGAAGGAATGCTTGGCCATGGAGTTGAATCAGAGATTAGAACAGCGTCCACTAGAATCAAGAATTCACTGA MKLTNIGGLSVRYYTSNRLTEKSDVYGFGVSLMEVISCRPVISNIEDPEMNYIAKWMRTMVAQRNIKNIVDPRLKEAYESNSVWKAVRLALACVSENSSERPTMNQVVIELKECLAMELNQRLEQRPLESRIH* Homology
BLAST of Chy1G022320 vs. ExPASy Swiss-Prot
Match: C0LGL4 (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana OX=3702 GN=At2g28960 PE=1 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 3.7e-27 Identity = 60/125 (48.00%), Postives = 87/125 (69.60%), Query Frame = 0
BLAST of Chy1G022320 vs. ExPASy Swiss-Prot
Match: C0LGG6 (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana OX=3702 GN=At1g51890 PE=1 SV=2) HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26 Identity = 60/117 (51.28%), Postives = 85/117 (72.65%), Query Frame = 0
BLAST of Chy1G022320 vs. ExPASy Swiss-Prot
Match: C0LGD9 (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana OX=3702 GN=At1g07560 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.4e-26 Identity = 58/115 (50.43%), Postives = 83/115 (72.17%), Query Frame = 0
BLAST of Chy1G022320 vs. ExPASy Swiss-Prot
Match: O81069 (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana OX=3702 GN=At2g28990 PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 9.1e-26 Identity = 57/125 (45.60%), Postives = 87/125 (69.60%), Query Frame = 0
BLAST of Chy1G022320 vs. ExPASy Swiss-Prot
Match: C0LGG3 (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana OX=3702 GN=At1g51820 PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 9.1e-26 Identity = 60/125 (48.00%), Postives = 87/125 (69.60%), Query Frame = 0
BLAST of Chy1G022320 vs. ExPASy TrEMBL
Match: A0A0A0K7Y3 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G452130 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61 Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0
BLAST of Chy1G022320 vs. ExPASy TrEMBL
Match: A0A1S3CID7 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230 OS=Cucumis melo OX=3656 GN=LOC103500757 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 4.5e-60 Identity = 119/127 (93.70%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of Chy1G022320 vs. ExPASy TrEMBL
Match: A0A5D3BXK8 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00590 PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 5.8e-60 Identity = 119/127 (93.70%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of Chy1G022320 vs. ExPASy TrEMBL
Match: A0A5D3BXY2 (Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00580 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.1e-45 Identity = 94/125 (75.20%), Postives = 107/125 (85.60%), Query Frame = 0
BLAST of Chy1G022320 vs. ExPASy TrEMBL
Match: A0A5A7V0Z5 (Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G001890 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.1e-45 Identity = 94/125 (75.20%), Postives = 107/125 (85.60%), Query Frame = 0
BLAST of Chy1G022320 vs. NCBI nr
Match: KAE8646522.1 (hypothetical protein Csa_016727 [Cucumis sativus]) HSP 1 Score: 246 bits (629), Expect = 4.38e-74 Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0
BLAST of Chy1G022320 vs. NCBI nr
Match: XP_011659666.2 (LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g51820 [Cucumis sativus]) HSP 1 Score: 246 bits (629), Expect = 6.02e-74 Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0
BLAST of Chy1G022320 vs. NCBI nr
Match: XP_008462388.1 (PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230 [Cucumis melo]) HSP 1 Score: 241 bits (615), Expect = 4.59e-72 Identity = 119/127 (93.70%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of Chy1G022320 vs. NCBI nr
Match: KAA0059458.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa] >TYK03865.1 putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 241 bits (614), Expect = 8.44e-72 Identity = 119/127 (93.70%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of Chy1G022320 vs. NCBI nr
Match: XP_038897468.1 (LOW QUALITY PROTEIN: LRR receptor-like serine/threonine-protein kinase IOS1 [Benincasa hispida]) HSP 1 Score: 214 bits (545), Expect = 6.19e-62 Identity = 106/125 (84.80%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of Chy1G022320 vs. TAIR 10
Match: AT1G51850.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 122.5 bits (306), Expect = 2.6e-28 Identity = 61/125 (48.80%), Postives = 89/125 (71.20%), Query Frame = 0
BLAST of Chy1G022320 vs. TAIR 10
Match: AT2G28960.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 122.5 bits (306), Expect = 2.6e-28 Identity = 60/125 (48.00%), Postives = 87/125 (69.60%), Query Frame = 0
BLAST of Chy1G022320 vs. TAIR 10
Match: AT1G51890.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 120.9 bits (302), Expect = 7.6e-28 Identity = 60/117 (51.28%), Postives = 85/117 (72.65%), Query Frame = 0
BLAST of Chy1G022320 vs. TAIR 10
Match: AT1G51890.2 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 120.9 bits (302), Expect = 7.6e-28 Identity = 60/117 (51.28%), Postives = 85/117 (72.65%), Query Frame = 0
BLAST of Chy1G022320 vs. TAIR 10
Match: AT1G07560.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 119.8 bits (299), Expect = 1.7e-27 Identity = 58/115 (50.43%), Postives = 83/115 (72.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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