Chy1G021310 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCCCCAAATTGAGCAGTCCTTTCAAGAGGAAGGAGAGGAAGGATAATTATTCCAGTAGTTATCTGAAGGGTATTGGGTTAGGAATTCTTGTACATCGATCACCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAATTGTCTCCTTCACTTGTTTGTAGTTCTAATAATAACCCATCTTTTCTCAAAACATGTTCTCTATGCAACAAGCATCTGGACCCTCAAGAAGATATTTATATGTACAGGTACTAAACTTGTTCTAACTTAATTTTAAGTATTTCCAGGATATGATCTTCTAATTAAATCCTTAGATTTTGCTTGTAGTTCAAGATCATGGAATTTGGATAAGGATTTACCCTTTTCTTTTTTGCTTGGAAGAAGTTGATTCTCGATTTGTAGTTGAGTTTTTGTTGCTGATATTTTTTTGGTCGTCCTGTGAAACAGGGGTGATCAAGGTTATTGCAGCATAAAGTGTCGAAATCAACAGATTGATATTGATGATAAGAGAGAATTAGAAGCTTCCACTAGAAAAATGGTGGCTGCTTACAGACAATGTCTTAAAAATGAACCAAGAACTGAAACACGTCTCCTCCTAGAAGATCTCCGGCAACATAATCGGCTTCCTCATTCGAGAATTCGACCAGTTGTTTCATAG ATGCTCCCCAAATTGAGCAGTCCTTTCAAGAGGAAGGAGAGGAAGGATAATTATTCCAGTAGTTATCTGAAGGGTATTGGGTTAGGAATTCTTGTACATCGATCACCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAATTGTCTCCTTCACTTGTTTGTAGTTCTAATAATAACCCATCTTTTCTCAAAACATGTTCTCTATGCAACAAGCATCTGGACCCTCAAGAAGATATTTATATGTACAGGGGTGATCAAGGTTATTGCAGCATAAAGTGTCGAAATCAACAGATTGATATTGATGATAAGAGAGAATTAGAAGCTTCCACTAGAAAAATGGTGGCTGCTTACAGACAATGTCTTAAAAATGAACCAAGAACTGAAACACGTCTCCTCCTAGAAGATCTCCGGCAACATAATCGGCTTCCTCATTCGAGAATTCGACCAGTTGTTTCATAG ATGCTCCCCAAATTGAGCAGTCCTTTCAAGAGGAAGGAGAGGAAGGATAATTATTCCAGTAGTTATCTGAAGGGTATTGGGTTAGGAATTCTTGTACATCGATCACCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAATTGTCTCCTTCACTTGTTTGTAGTTCTAATAATAACCCATCTTTTCTCAAAACATGTTCTCTATGCAACAAGCATCTGGACCCTCAAGAAGATATTTATATGTACAGGGGTGATCAAGGTTATTGCAGCATAAAGTGTCGAAATCAACAGATTGATATTGATGATAAGAGAGAATTAGAAGCTTCCACTAGAAAAATGGTGGCTGCTTACAGACAATGTCTTAAAAATGAACCAAGAACTGAAACACGTCTCCTCCTAGAAGATCTCCGGCAACATAATCGGCTTCCTCATTCGAGAATTCGACCAGTTGTTTCATAG MLPKLSSPFKRKERKDNYSSSYLKGIGLGILVHRSPEPNLVVKQSRKLSPSLVCSSNNNPSFLKTCSLCNKHLDPQEDIYMYRGDQGYCSIKCRNQQIDIDDKRELEASTRKMVAAYRQCLKNEPRTETRLLLEDLRQHNRLPHSRIRPVVS* Homology
BLAST of Chy1G021310 vs. ExPASy Swiss-Prot
Match: P0DO11 (FCS-Like Zinc finger 17 OS=Arabidopsis thaliana OX=3702 GN=FLZ17 PE=1 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 5.3e-22 Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = 0
BLAST of Chy1G021310 vs. ExPASy Swiss-Prot
Match: P0DO12 (FCS-Like Zinc finger 18 OS=Arabidopsis thaliana OX=3702 GN=FLZ18 PE=1 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 5.3e-22 Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = 0
BLAST of Chy1G021310 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.6e-10 Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 0
BLAST of Chy1G021310 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.6e-10 Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = 0
BLAST of Chy1G021310 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09 Identity = 26/51 (50.98%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of Chy1G021310 vs. ExPASy TrEMBL
Match: A0A0A0K9B4 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G448060 PE=3 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 3.8e-79 Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of Chy1G021310 vs. ExPASy TrEMBL
Match: A0A5D3C0J4 (DUF581 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001630 PE=3 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76 Identity = 147/152 (96.71%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of Chy1G021310 vs. ExPASy TrEMBL
Match: A0A1S3CGJ4 (uncharacterized protein LOC103500647 OS=Cucumis melo OX=3656 GN=LOC103500647 PE=3 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76 Identity = 147/152 (96.71%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of Chy1G021310 vs. ExPASy TrEMBL
Match: A0A6J1JTJ9 (protein MARD1-like OS=Cucurbita maxima OX=3661 GN=LOC111488741 PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.9e-46 Identity = 102/131 (77.86%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of Chy1G021310 vs. ExPASy TrEMBL
Match: A0A6J1GPB9 (uncharacterized protein LOC111456219 OS=Cucurbita moschata OX=3662 GN=LOC111456219 PE=3 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 2.5e-46 Identity = 102/131 (77.86%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of Chy1G021310 vs. NCBI nr
Match: XP_004141729.1 (FCS-Like Zinc finger 17 [Cucumis sativus] >KGN45444.1 hypothetical protein Csa_016251 [Cucumis sativus]) HSP 1 Score: 302 bits (773), Expect = 2.70e-103 Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of Chy1G021310 vs. NCBI nr
Match: XP_008462244.1 (PREDICTED: uncharacterized protein LOC103500647 [Cucumis melo] >KAA0059360.1 DUF581 family protein [Cucumis melo var. makuwa] >TYK03966.1 DUF581 family protein [Cucumis melo var. makuwa]) HSP 1 Score: 294 bits (752), Expect = 4.16e-100 Identity = 147/152 (96.71%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of Chy1G021310 vs. NCBI nr
Match: XP_038896964.1 (FCS-Like Zinc finger 17-like isoform X1 [Benincasa hispida]) HSP 1 Score: 269 bits (688), Expect = 2.47e-90 Identity = 136/153 (88.89%), Postives = 142/153 (92.81%), Query Frame = 0
BLAST of Chy1G021310 vs. NCBI nr
Match: XP_038896965.1 (FCS-Like Zinc finger 17-like isoform X2 [Benincasa hispida]) HSP 1 Score: 259 bits (663), Expect = 1.50e-86 Identity = 134/153 (87.58%), Postives = 140/153 (91.50%), Query Frame = 0
BLAST of Chy1G021310 vs. NCBI nr
Match: XP_022992436.1 (protein MARD1-like [Cucurbita maxima]) HSP 1 Score: 194 bits (492), Expect = 1.06e-60 Identity = 102/131 (77.86%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of Chy1G021310 vs. TAIR 10
Match: AT1G53885.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 105.5 bits (262), Expect = 3.8e-23 Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = 0
BLAST of Chy1G021310 vs. TAIR 10
Match: AT1G53903.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 105.5 bits (262), Expect = 3.8e-23 Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = 0
BLAST of Chy1G021310 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 66.2 bits (160), Expect = 2.5e-11 Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 0
BLAST of Chy1G021310 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 66.2 bits (160), Expect = 2.5e-11 Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = 0
BLAST of Chy1G021310 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10 Identity = 26/51 (50.98%), Postives = 39/51 (76.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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